Microbiome Research for Animal, Plant and Environmental Health: Second Edition

A special issue of Microorganisms (ISSN 2076-2607). This special issue belongs to the section "Microbiomes".

Deadline for manuscript submissions: 31 December 2025 | Viewed by 6

Special Issue Editors


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Guest Editor
Department of Molecular Biology and Genetics, Faculty of Health Sciences, Democritus University of Thrace, 68100 Alexandroupolis, Greece
Interests: probiotics; microbiota; microbiome; beneficial microbes; multi-omics; lactic acid bacteria
Special Issues, Collections and Topics in MDPI journals

E-Mail Website
Guest Editor
Department of Molecular Biology & Genetics, Democritus University of Thrace, 68100 Alexandroupolis, Greece
Interests: natural products; probiotics; microbiome; rhizobiome; cellular stress responses
Special Issues, Collections and Topics in MDPI journals

Special Issue Information

Dear Colleagues,

This Special Issue is a continuation of our previous Special Issue, “Microbiome Research for Animal, Plant and Environmental Health” (https://www.mdpi.com/si/195604).

Microbial communities play an integral role in the homeostasis and physiology of macro- and micro-ecosystems. Accumulating evidence demonstrates the critical impact of human microbiota on health and disease. In this context, it is recognized that the host microbiota contributes to crucial processes, such as nutrient synthesis and digestion, immunomodulation, intestinal barrier integrity, and protection against pathogenic insults, while exerting extraintestinal and systemic effects. By extension, microbiota research is of great interest because of its potential applications in the field of agriculture and animal husbandry. Indeed, the soil microbiome, as well as the plant microbiome and the rhizosphere microbiome (rhizobiome), can influence plant health, nutritional value, and the ability of plants to adapt to and withstand extreme environmental conditions, thus having major ecological and economic implications. In addition, the correlation between microbiota composition and the spread of pathogens to animals and the food chain is gaining increasing attention in the context of the “One Health” approach. Manipulating the composition of microbiota in these ecosystems can have a significant impact on human and animal health whilst also contributing to sustainable agriculture.

As Guest Editors of this Special Issue, we would like to invite you to submit original research articles, review articles, and short communications on various aspects of animal, plant, environmental, or soil microbiome research, new mechanistic insights into host–microbe interactions, methods of microbiome manipulation, and innovative technologies for sustainable livestock and agri-food production.

Dr. Alex Galanis
Dr. Aglaia Pappa
Guest Editors

Manuscript Submission Information

Manuscripts should be submitted online at www.mdpi.com by registering and logging in to this website. Once you are registered, click here to go to the submission form. Manuscripts can be submitted until the deadline. All submissions that pass pre-check are peer-reviewed. Accepted papers will be published continuously in the journal (as soon as accepted) and will be listed together on the special issue website. Research articles, review articles as well as short communications are invited. For planned papers, a title and short abstract (about 100 words) can be sent to the Editorial Office for announcement on this website.

Submitted manuscripts should not have been published previously, nor be under consideration for publication elsewhere (except conference proceedings papers). All manuscripts are thoroughly refereed through a single-blind peer-review process. A guide for authors and other relevant information for submission of manuscripts is available on the Instructions for Authors page. Microorganisms is an international peer-reviewed open access monthly journal published by MDPI.

Please visit the Instructions for Authors page before submitting a manuscript. The Article Processing Charge (APC) for publication in this open access journal is 2700 CHF (Swiss Francs). Submitted papers should be well formatted and use good English. Authors may use MDPI's English editing service prior to publication or during author revisions.

Keywords

  • environmental microbiome
  • soil microbiome
  • rhizobiome
  • host–microbe interactions
  • microbiome manipulation
  • sustainable agriculture

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Published Papers

This special issue is now open for submission.
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