Next Article in Journal
Structure-Guided Approach to Discover Tuberosin as a Potent Activator of Pyruvate Kinase M2, Targeting Cancer Therapy
Next Article in Special Issue
Chalcogen Bond as a Factor Stabilizing Ligand Conformation in the Binding Pocket of Carbonic Anhydrase IX Receptor Mimic
Previous Article in Journal
Long Non-Coding RNAs, Extracellular Vesicles and Inflammation in Alzheimer’s Disease
Previous Article in Special Issue
Observing How Glutathione and S-Hexyl Glutathione Bind to Glutathione S-Transferase from Rhipicephalus (Boophilus) microplus
 
 
Article
Peer-Review Record

Acetophenone-Based 3,4-Dihydropyrimidine-2(1H)-Thione as Potential Inhibitor of Tyrosinase and Ribonucleotide Reductase: Facile Synthesis, Crystal Structure, In-Vitro and In-Silico Investigations

Int. J. Mol. Sci. 2022, 23(21), 13164; https://doi.org/10.3390/ijms232113164
by Aamer Saeed 1,*, Syeda Abida Ejaz 2,*, Aqsa Khalid 1, Pervaiz Ali Channar 3, Mubashir Aziz 2, Qamar Abbas 4,5, Tanveer A. Wani 6, Nawaf A. Alsaif 6, Mohammed M. Alanazi 6, Abdullah M. Al-Hossaini 6, Nojood Altwaijry 7, Seema Zargar 7, Muawya Elhadi 8 and Tuncer Hökelek 9
Reviewer 1:
Reviewer 2: Anonymous
Int. J. Mol. Sci. 2022, 23(21), 13164; https://doi.org/10.3390/ijms232113164
Submission received: 12 October 2022 / Revised: 24 October 2022 / Accepted: 27 October 2022 / Published: 29 October 2022
(This article belongs to the Special Issue 2nd Edition: Advances in Molecular Simulation)

Round 1

Reviewer 1 Report

The manuscript submitted by Saeed et al. entitled “Acetophenone-based 3,4-dihydropyrimidine-2(1H)-thione as 2 Potential Inhibitor of tyrosinase and Ribonucleotide eductase: 3 Facile synthesis, Crystal Structure, In-vitro and In-silico 4 Investigations” describes   the synthesis of 3,4-dihydropyrimidine-2(1H)-thione .The introduction part is written fairly with approaches involving in the synthesis of dihydroyrimidine thione and about the statistics and cause of skin cancer and therapeutics development against the same like tyrosinase/ribonucleotide reductase inhibitors. Data representation and data quality and spectral qualities are good. Moreover, detailed X-ray analysis, in-vitro testing were done and confirmed by in-silico techniques that included molecular docking investigations, density functional theory calculations and Hirshfeld analysis. In addition, DNA-binding docking studies were performed to evaluate the crystal as a powerfulDNA groove binder.The following points should be clarified

1)  The 13 C NMR data should be written up with mention the type of carbon like –C, -CH, - CH 2 and –CH 3 against each value.

2) The most important point is that all the experiments to results are based on a single synthetic compound. I would prefer the synthesis of some more analogues based on the same strategy followed by docking and bio-evaluation for all of the compounds and then conclusion regarding the lead compound/compounds.

In my opinion the manuscript is not suitable for publication in an esteemed journal like “International Journal of Molecular Sciences” in its current form. After the inclusion of above mentioned major work it can be resubmitted.

Author Response

Reviewer 1

The following points should be clarified

  • The 13 C NMR data should be written up with mention the type of carbon like –C, -CH, - CH 2 and –CH 3 against each value.

Response: Suggested changes has been incorporated in main text

2) The most important point is that all the experiments to results are based on a single synthetic compound. I would prefer the synthesis of some more analogues based on the same strategy followed by docking and bio-evaluation for all of the compounds and then conclusion regarding the lead compound/compounds.

Response: We are thankful to the reviewer for this fruitful suggestion. Specific drugs for the treatment of skin cancer are very few. This crystal structure is new and depending upon the results it is found as the best tyrosinase inhibitor and RNR inhibitor. We want to publish this compound first as this pure compound can act as lead compounds that can be used for skin cancer treatment.  Moreover, we are in the process to synthesize the derivatives based on the results, and in a future publication, we will compare the result. The authors are thankful in advance to the reviewer for understanding our situation and we do hope that reviewer will allow the publishing article with one pure compound

 

Author Response File: Author Response.docx

Reviewer 2 Report

The manuscript may be revised according to the following comments:

1. In Introduction section: abbreviation dNTP should be spell out.

2. Please, change the colour of sulfur atom on figures and schemes - it it almost invisible.

3. Why on fig. 8 the tyrosinase activity increases with the crystal and kojic acid concentration growth? It seems like both compounds act as activator of tyrosinase, not as inhibitors.

4. Please, provide 13C NMR description of compound 4 in Experimental section

   

Author Response

The manuscript may be revised according to the following comments:

  1. In Introduction section: abbreviation dNTP should be spell out.

Response: dNTP is abbreviated as deoxynucleoside triphosphate which has been incorporated in main text.

  1. Please, change the colour of sulfur atom on figures and schemes - it it almost invisible.

Response: Correction has been made as suggested.

  1. Why on fig. 8 the tyrosinase activity increases with the crystal and kojic acid concentration growth? It seems like both compounds act as activator of tyrosinase, not as inhibitors.

Response: In figure 8, percentage inhibition of tyrosinase is plotted against log concentration. it is mistakenly written as tyrosinase activity which has been corrected. Kojic acid is standard inhibitor of tyrosinase. Reference is provided below;

doi: 10.3390/ijms10062440

  1. Please, provide 13C NMR description of compound 4 in Experimental section

Response: Description of 13C NMR is incorporated in the experimental section.

Author Response File: Author Response.docx

Round 2

Reviewer 1 Report

Based on the response received regarding the synthesis of analogs later based on this result, I think the manuscript may be accepted subject to editorial corrections.

Back to TopTop