Search Results (29)

Brassica napus is one of the most important oil crops. Rapid breeding of excellent genotypes is an important aspect of breeding. As a cutting-edge and reliable technique, genome-wide selection (GS) has been widely used and is influenced by many factors. In this study, ten phenotypic traits of two populations were studied, including oleic acid (C18:1), linoleic acid (C18:2), linolenic acid (C18:3), glucosinolate (GSL), seed oil content (SOC), and seed protein content (SPC), silique length (SL), days to initial flowering (DIF), days to final flowering (DFF), and the flowering period (FP). The effects of different GS models, marker densities, population designs, and the inclusion of nonadditive effects, trait-specific SNPs, and deleterious mutations on GS were evaluated. The results highlight the superior prediction accuracy (PA) under the RF model. Among the ten traits, the PA of glucosinolate was the highest, and that of linolenic acid was the lowest. At the same time, 5000 markers and a population of 400 samples, or a training population three times the size of an applied breeding population, can achieve optimal performance for most traits. The application of nonadditive effects and deleterious mutations had a weak effect on the improvement of traits with high PA but was effective for traits with low PA. The use of trait-specific SNPs can effectively improve the PA, especially when using markers with p-values less than 0.1. In addition, we found that the PA of traits was significantly and positively correlated with the number of markers, according to p-values less than 0.01. In general, based on the associated population, a GS system suitable for B. napus was established in this study, which can provide a reference for the improvement of GS and is conducive to the subsequent application of GS in B. napus, especially in the aspects of model selection of GS, the application of markers, and the setting of population sizes. Full article

Orphan genes (OGs), which are unique to a specific taxon and have no detectable sequence homology to any known genes across other species, play a pivotal role in governing species-specific phenotypic traits and adaptive evolution. In this study, 20 OGs of Chinese cabbage (Brassica rapa OGs, BrOGs) were transferred into Arabidopsis thaliana by genetic transformation to construct an overexpression library in which 50% of the transgenic lines had a delayed flowering phenotype, 15% had an early flowering phenotype, and 35% showed no difference in flowering time compared to control plants. There were many other phenotypes attached to these transgenic lines, such as leaf color, number of rosette leaves, and silique length. To understand the impact of BrOGs on delayed flowering, BrOG142OE, which showed the most significantly delayed flowering phenotype, was chosen for further analysis, and BrOG142 was renamed BOLTING RESISTANCE 4 (BR4). In BR4OE, the expression of key flowering genes, including AtFT and AtSOC1, significantly decreased, and AtFLC and AtFRI expression increased. GUS staining revealed BR4 promoter activity mainly in the roots, flower buds and leaves. qRT-PCR showed that BR4 primarily functions in the flowers, flower buds, and leaves of Chinese cabbage. BR4 is a protein localized in the nucleus, cytoplasm, and cell membrane. The accelerated flowering time phenotype of BR4OE was observed under gibberellin and vernalization treatments, indicating that BR4 regulates flowering time in response to these treatments. These results provide a foundation for elucidating the mechanism by which OGs regulate delayed flowering and have significance for the further screening of bolting-resistant Chinese cabbage varieties. Full article

The post-flowering stage is critical for plant yield and seed quality. This can be influenced by the photoperiod; however, the underlying mechanisms are not clear. Arabidopsis thaliana was selected as the experimental material to test this phenomenon. Different photoperiod treatments were implemented during the post-flowering stage to comprehensively examine the effects of photoperiod on physiological and phenotypic characteristics. This work aims to explore the photoperiod measurement mechanisms that control post-flowering growth and development. Our results showed the following: (1) During the post-flowering stage, the photoperiod had a significant impact on both vegetative and reproductive growth. (2) Photoperiod measurement mechanisms can be categorized into absolute and photosynthetic photoperiods. These mechanisms exert distinct effects. (3) Absolute photoperiod regulated the cytokinin to auxin ratio, thereby controlling the number and length of branches and the number of siliques. Extending the absolute photoperiod had a preferential promoting effect. (4) Photosynthetic photoperiod affected duration of photosynthesis. This process regulated the formation and accumulation of photosynthetic products. Consequently, it influenced the biomass and efficiency of siliques. Extending the photosynthetic photoperiod had a positive effect. This study demonstrates that plants distinguish between photoperiodic signals and energy effects to independently control post-flowering development and growth. Full article

Crops are continually subjected to frequent and extreme changes in climate, such as high temperatures and soil water deficits. Many studies have shown the individual effects of these factors on plants, but their combined effects on reproductive growth and subsequent seed germinability have received little attention. In this study, we used canola (Brassica napus) plants and grew them through their lifecycle under two temperature regimes (20/10 °C and 24/14 °C, 16 h light/8 h dark) in controlled-environment growth chambers. Half of the plants were watered to field capacity (well-watered) and the other half at wilting point (water-stressed). During the reproductive stage, the flower, silique, and seed traits were measured. Higher temperatures decreased the petal width by 1.17 times but increased petal anthocyanins by 1.03 times. The water deficit decreased the silique length and total seed number by 1.21 and 1.32 times, respectively, but increased nectar sugar concentration by 1.28 times. The total volume of nectar was affected by the interaction of temperature and water. The nectar volume was lowest in the water-stressed plants under higher temperatures (2.66 ± 0.29 µL per flower) but highest in the well-watered plants under the same temperature regime (5.73 ± 0.37 µL per flower). In conclusion, the combined effects of temperature and water were less pronounced than the individual effects of these factors on canola reproductive yield. Full article

Glyoxalase I (GLYI) is a key enzyme that detoxifies methylglyoxal, a toxic byproduct of glycolysis, and is essential for plant pollination. However, the genome-wide identification and functional analysis of GLYI in Brassica rapa L. (B. rapa) remain limited. This study identified 17 BrGLYI genes (BrGLYI1–BrGLYI17) from the B. rapa genome. The self-compatible line 039-1 and the self-incompatible line GAU-28-5 were used as experimental materials, and Real-Time Quantitative Reverse Transcription PCR (RT-qPCR) was performed to examine the effect of BrGLYI genes on self-compatibility in winter B. rapa. Preliminary results showed that BrGLYI13 exhibited significant tissue specificity, with higher expression in the flowers of 039-1 compared to GAU-28-5. The open reading frame of BrGLYI13 (852 bp) was cloned from both 039-1 and GAU-28-5 cDNA, with no base mutations observed between the two lines. RT-qPCR revealed higher BrGLYI13 expression in the stigma of 039-1 compared to GAU-28-5. Based on the functional conservation and sequence homology, BrGLYI13 is speculated to play a similar role to that of AtGLYI3 in methylglyoxal detoxification and stress response. Furthermore, the knockout of AtGLYI3 resulted in reduced silique lengths and seed numbers. These findings suggest that BrGLYI13 is involved in the self-compatibility response in B. rapa and promotes the silique length and seed number in the Arabidopsis mutant, providing a basis for further research on the mechanisms of self-compatibility in B. rapa. Full article

Progressive climate change increases drought frequency, severely impacting crop growth and yield. New eco-friendly alternatives to chemical protection agents and fertilisers are needed to reduce pollution and enhance plant health. This study evaluated the effects of the plant growth-promoting rhizobacteria (PGPR) and the hydrogel (potassium polyacrylate) on Brassica napus L. during drought conditions. After in vitro and pot experiments, Serratia plymuthica was selected from six PGPR candidates based on its ability to enhance plant biomass, shoot length, and number of internodes. The seed viability test, reactive oxygen species accumulation, and SOD activity showed no adverse effects of applying hydrogel to canola seeds. Moreover, the hydrogel did not show toxicity towards tested bacterial strains. Field trials during the drought demonstrated that inoculation with S. plymuthica significantly increased the number of siliques (16.48%) and yield (19.93%), compared to controls. Plants grown from inoculated seeds were also taller (3.28%) and had more branches (39.99%). We also analysed seedling emergence, number of internodes, thousand seeds’ weight, and seed moisture. The hydrogel applied to the soil delayed seedling emergence and dampened the growth-promoting effect of S. plymuthica, resulting in reduced yield. Compared with plants inoculated with S. plymuthica, there was a decrease in the yield of plants treated solely with hydrogel and in plants treated with hydrogel and the bacterium of 23.61% and 27.79%, respectively. Our results indicate that S. plymuthica has a high potential for use in commercial canola farming, especially as an ingredient added to seed coatings. Full article

Plant height (PH) is a critical agronomic trait in Brassica napus, significantly impacting yield. Consequently, identifying genes associated with plant height is a pivotal objective in oilseed rape breeding. This study employed a combination of bulk segregant analysis sequencing (BSA-seq) and RNA sequencing (RNA-seq) for analysis. A novel quantitative trait locus (QTL), qPH_C02, was identified between 63,989,634 and 64,945,122 bp on chromosome C02, from which eight candidate genes were screened. The Gene Ontology (GO) analysis revealed enrichment in peroxisomes, while the Kyoto Encyclopedia of Genes and Genomes (KEGG) analysis indicated enrichment in the oxidative phosphorylation (OP) pathway. It is hypothesized that the observed differences in plant height and silique length may be attributed to the regulation of peroxidase activity in the OP pathway, which in turn alters plant energy metabolism and controls nutrient uptake. Subsequently, we will further test this hypothesis. The results of this study will contribute to our understanding of the genetic basis for differences in plant height and provide a foundation for the selection and breeding of Brassica napus varieties with desired plant shapes. Full article

Alfin-like proteins (ALs) form a plant-specific transcription factor (TF) gene family involved in the regulation of plant growth and development, and abiotic stress response. In this study, 30 ALs were identified in Brassica napus ecotype ‘Zhongshuang 11’ genome (BnaALs), and unevenly distributed on 15 chromosomes. Structural characteristic analysis showed that all of the BnaALs contained two highly conserved domains: the N terminal DUF3594 domain and the C-terminal PHD-finger domain. The BnaALs were classified into four groups (Group I-IV), supported by conserved intron–exon and protein motif structures in each group. The allopolyploid event between B. oleracea and B. rapa ancestors and the small-scale duplication events in B. napus both contributed to the large BnaALs expansion. The promoter regions of BnaALs contained multiple abiotic stress cis-elements. The BnaALs in I-IV groups were mainly expressed in cotyledon, petal, root, silique, and seed tissues, and the duplicated gene pairs shared highly similar expression patterns. RNA-seq and RT-qPCR analysis showed that BnaALs were obviously induced by low nitrogen (LN) and low phosphorus (LP) treatments in roots. Overexpressing BnaAL02 and BnaAL28 in Arabidopsis demonstrated their functions in response to LN and LP stresses. BnaAL28 enhanced primary roots’ (PRs) length and lateral roots’ (LRs) number under LP and LN conditions, where BnaAL02 can inhibit LR numbers under the two conditions. They can promote root hair (RH) elongation under LP conditions; however, they suppressed RH elongation under LN conditions. Our result provides new insight into the functional dissection of this family in response to nutrient stresses in plants. Full article

The Bax inhibitor-1 (BI-1) gene family, which is important for plant growth, development, and stress tolerance, remains largely unexplored in cauliflower. In this study, we identified and characterized cauliflower BI-1 family genes. Based on aligned homologous sequences and collinearity with Arabidopsis genes, we identified nine cauliflower BI-1 genes, which encode proteins that varied in length, molecular weight, isoelectric point, and predicted subcellular localization, including the Golgi apparatus, plasma membrane, and various compartments within the chloroplast. Phylogenetic analyses detected evolutionary conservation and divergence among these genes. Ten structural motifs were identified, with Motif 5 found to be crucial for inhibiting apoptosis. According to the cis-regulatory elements in their promoters, these genes likely influence hormone signaling and stress responses. Expression profiles among tissues highlighted the functional diversity of these genes, with particularly high expression levels observed in the silique and root. Focusing on BobBIL4, we investigated its role in brassinosteroid (BR)-mediated root development and salt stress tolerance. BobBIL4 expression levels increased in response to BR and salt treatments. The functional characterization of this gene in Arabidopsis revealed that it enhances root growth and salinity tolerance. These findings provide insights into BI-1 gene functions in cauliflower while also highlighting the potential utility of BobBIL4 for improving crop stress resistance. Full article

Rapeseed siliques easily shatter after ripening, resulting in a significant amount of grain loss, which delimits the development of rapeseed machine harvest. However, the effect of nitrogen (N) and density interaction on the characteristics of rape siliques and shattering resistance index is still vague. During the 2021–2022 and 2022–2023 growing seasons, we selected the Jiayou No. 5 rapeseed variety and set three N application levels (N1: 90 kg ha⁻¹, N2: 180 kg ha⁻¹, N3: 270 kg ha⁻¹) and two density treatments (M1: 150,000 plants ha⁻¹, M2: 300,000 plants ha⁻¹) to research the effects of N and density interaction on morphological indexes, physiological indexes, shatter resistance index and yield of direct-seeding rapeseed siliques. The silique shatter resistance index, silique’s length, weight, moisture content, silique shell’s weight, thickness, lignin content, cellulose content and phenylalaninase (PAL) activity all increased first and then decreased with the increase in the N application rate; the N2 treatment increased by 18.38% and 26.92%, respectively, compared to the N1 and N3 treatments; 3.65%, 2.48%; 6.70%, 3.58%; 20.46%, 18.33%; 5.97%, 5.96%; 8.82%, 9.60%; 9.12%, 19.90%; 43.85%, 69%; 2.10%, 11.04%. Compared with the M1 treatment, the silique shatter resistance index, silique’s length, weight, moisture content, silique shell’s weight, thickness, lignin content, cellulose content and PAL activity were lower under M2 treatment. Correlation analysis demonstrated that the silique’s length, water content, silique shell’s weight, thickness, lignin content, cellulose content and PAL activity were significantly positively correlated with the silique shatter resistance index. Therefore, this study shows that N2M1 treatment can carry off synergy between silique shatter resistance and yield. Full article

SCARECROW-LIKE6 (SCL6) plays a role in the formation and maintenance of the meristem. In Larix kaempferi (Lamb.) Carr., an important afforestation tree species in China, SCL6 (LaSCL6) has two alternative splicing variants—LaSCL6-var1 and LaSCL6-var2—which are regulated by microRNA171. However, their roles are still unclear. In this study, LaSCL6-var1 and LaSCL6-var2 were transformed into the Arabidopsis thaliana (L.) Heynh. genome, and the phenotypic characteristics of transgenic A. thaliana, including the germination percentage, root length, bolting time, flower and silique formation times, inflorescence axis length, and branch and silique numbers, were analyzed to reveal their functions. It was found that LaSCL6-var1 and LaSCL6-var2 overexpression shortened the root length by 41% and 31%, respectively, and increased the inflorescence axis length. Compared with the wild type, the bolting time in transgenic plants was delayed by approximately 2–3 days, the first flower and silique formation times were delayed by approximately 3–4 days, and the last flower and silique formation times were delayed by about 5 days. Overall, the life cycle in transgenic plants was prolonged by approximately 5 days. These results show that LaSCL6 overexpression inhibited the transitions from the vegetative meristem to inflorescence meristem and from the flower meristem to meristem arrest in A. thaliana, revealing the roles of LaSCL6-var1 and LaSCL6-var2 in the fate transition and maintenance of the meristem. Full article

Nuclear factor Y (NF-Y) is a class of transcription factors consisting of NF-YA, NF-YB and NF-YC subunits, which are widely distributed in eukaryotes. The NF-YC subunit regulates plant growth and development and plays an important role in the response to stresses. However, there are few reports on this gene subfamily in tea plants. In this study, nine CsNF-YC genes were identified in the genome of ‘Longjing 43’. Their phylogeny, gene structure, promoter cis-acting elements, motifs and chromosomal localization of these gene were analyzed. Tissue expression characterization revealed that most of the CsNF-YCs were expressed at low levels in the terminal buds and at relatively high levels in the flowers and roots. CsNF-YC genes responded significantly to gibberellic acid (GA) and abscisic acid (ABA) treatments. We further focused on CsNF-YC6 because it may be involved in the growth and development of tea plants and the regulation of response to abiotic stresses. The CsNF-YC6 protein is localized in the nucleus. Arabidopsis that overexpressed CsNF-YC6 (CsNF-YC6-OE) showed increased seed germination and increased root length under ABA and GA treatments. In addition, the number of cauline leaves, stem lengths and silique numbers were significantly higher in overexpressing Arabidopsis lines than wild type under long-day growth conditions, and CsNF-YC6 promoted primary root growth and increased flowering in Arabidopsis. qPCR analysis showed that in CsNF-YC6-OE lines, flowering pathway-related genes were transcribed at higher levels than wild type. The investigation of the CsNF-YC gene has unveiled that CsNF-YC6 plays a pivotal role in plant growth, root and flower development, as well as responses to abiotic stress. Full article

In order to reduce the silique shattering loss of the rapeseed mechanical harvesting process, based on the state of force on the silique during the rapeseed harvesting reel branch stage, Ningza 1810, Zhenyou 8, and Fengyou 306 were used as research objects, and the experimental research on the factors affecting rapeseed silique shattering was carried out using the swing impact method. The experimental analysis showed that rapeseed varieties, silique moisture content, silique growth position, collision material, impact speed, force position, and other factors had significant effects on silique shattering. The impact velocity was less than 1.5 m·s⁻¹, the difference in the effect of each factor on pod shattering was not significant, and it was not easy to shatter when the moisture content of the rapeseed silique was higher. The impact resistance of the front side of rapeseed was two to four times that of the bonding surface of rapeseed petals, the shattering rate of the top rapeseed silique was twice that of the bottom siliques, and when siliques were supported, they were more likely to shatter under external forces than when they were unsupported. The experimental study of the mechanical properties of rapeseed siliques was carried out using the impending fracture method; the experimental analyses showed that the support position and force position of the silique, the loading speed, and the growth position of the silique had a significant effect on the mechanical properties of the silique. The maximum cracking force was higher and the bending strength was stronger when the body of the silique was supported; the range of the maximum cracking force was 3.05 N to 4.16 N, and the bending strength range was 8.48 MPa to 11.57 MPa. The maximum cracking force and bending strength of the silique were stronger when the front side of the silique petal was pressurized than when the bonding surface of the petal was pressurized. Based on Pearson’s correlation and grey correlation analysis, the morphological characteristics of rapeseed siliques were ranked in order of their influence on the performance of siliques in terms of the angle between the silique and stalk, stalk diameter, petal thickness, beak length, silique thickness, silique width, and silique length. This study can be used as a reference for the design and optimization of the rapeseed harvesting reel branch mechanism and the selection of machine-harvestable rapeseed varieties. Full article

A crucial aim for rapeseed breeders is increasing the seed yield through improving yield- and silique-related traits. In this research, traits including the number of seeds per silique, silique length, silique width, and thousand-seed weight combined with seed coat color were investigated. Yellow-seeded lines of oilseed rape have a thinner seed coat, lower fiber content, and higher protein and oil content than traditional varieties. Hybrids of yellow- and black-seeded Brassica napus, which combine the advantages of both types of seeds, are tested for their suitability in breeding. Therefore, the aim of this study was to assess a population of 78 doubled haploid lines with different seed coat colors to select genotypes connecting a light color of seeds with good yielding characteristics. Multivariate methods such as analysis of variance, correlation analysis, regression analysis, canonical variate analysis, Mahalanobis distances, and estimation of gene effects were used. The results showed that all tested genotypes were significantly different regarding all five studied traits. The multidimensional analyses gave an accurate overview of the relationship between the examined features. The color and weight of seeds were considered the most important for breeding rapeseed with better seed properties. Although a negative correlation between these two characteristics occurs quite commonly, it was not present in our plant material, which allowed us to select lines with a-light seed color and high thousand-seed weight, which is a significant achievement. As a result, two doubled haploid lines were chosen as valuable breeding material for creating oilseed rape varieties with improved biochemical characteristics of seeds. Full article

This study explored the role of exogenous α-Toc (0.5 mM) and Asc (1 mM) in alleviating the damaging effects of salt stress in rapeseed plants (Brassica campestris cv. BARI Sarisha-17). Exposure of 21-day-old plants to different levels of salt stress (75 mM and 150 mM NaCl) resulted in the higher accumulation of sodium ions (Na⁺), reduced potassium ion (K⁺) levels, lower K⁺/Na⁺ ratio, increased oxidative damage, chlorophyll (Chl) breakdown, and disrupted antioxidant and glyoxalase systems. Phenotype responses to salt stress included reductions in plant height, shoot fresh weight, dry weight, number of siliques plant⁻¹, silique length, number of seeds silique⁻¹, 1000-seed weight, and seed yield plant⁻¹. Exogenous α-Toc and Asc applications enhanced the levels of endogenous ascorbate, glutathione (GSH), AsA/dehydroascorbate ratios, GSH/glutathione disulfide, ascorbate peroxidase, monodehydroascorbate reductase, glutathione reductase, glutathione peroxidase, and catalase activities in the salt-stressed plants. Exogenous α-Toc and Asc enhanced antioxidant defense system components and insured better oxidative stress tolerance, as indicated by reduced hydrogen peroxide generation, membrane lipid peroxidation, and electrolyte leakage. Exogenous α-Toc and Asc increased glyoxalase I and glyoxalase II activities in the salt-affected plants. Moreover, they regulated proline levels and increased the leaf relative water content, as well as the Chl level. Exogenous α-Toc and Asc also restored growth and improved yield attributes and seed yield per plants in the salt-affected rapeseed. Full article