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12 pages, 2555 KiB  
Article
Genogroup-Specific Multiplex Reverse Transcriptase Loop-Mediated Isothermal Amplification Assay for Point-of-Care Detection of Norovirus
by Wahedul Karim Ansari, Mi-Ran Seo and Yeun-Jun Chung
Diagnostics 2025, 15(15), 1868; https://doi.org/10.3390/diagnostics15151868 - 25 Jul 2025
Viewed by 209
Abstract
Background/Objectives: Norovirus is a major cause of acute gastroenteritis worldwide. Considering its highly infectious and transmissible nature, rapid and accurate diagnostic tools are of utmost importance for the effective control of outbreaks in the context of point-of-care testing (POCT). In this study, we [...] Read more.
Background/Objectives: Norovirus is a major cause of acute gastroenteritis worldwide. Considering its highly infectious and transmissible nature, rapid and accurate diagnostic tools are of utmost importance for the effective control of outbreaks in the context of point-of-care testing (POCT). In this study, we developed a genogroup-specific multiplex reverse transcriptase loop-mediated isothermal amplification assay to detect the human norovirus genogroups I and II (GI and GII, respectively). Methods: For the comprehensive detection of clinically relevant genotypes, two sets of primers were incorporated into the assays targeting the RdRp-VP1 junction: one against GI.1 and GI.3, and the other for GII.2 and GII.4. Following optimization of the reaction variables, we standardized the reaction conditions at 65 °C with 6 mM MgSO4, 1.4 mM dNTPs, 7.5 U WarmStart RTx Reverse Transcriptase, and Bst DNA polymerase at 8 U and 10 U for GI and GII, respectively. Amplification was monitored in real-time using a thermocycler platform to ensure precise quantification and detection. Finally, the assay was evaluated through portable isothermal detection device to test its feasibility in on-site settings. Results: Both assays detected the template down to 102–103 copies per reaction and showed high target selectivity, yielding no non-specific amplification across 39 enteric pathogens. These assays enabled prompt detection of GI within 10–12 min and of GII within 12–17 min after the reaction was initiated. Onsite validation reveals all template detection below 15 min, demonstrating its potential feasibility in point-of-care applications. Including the sample preparation time, test results were obtained in less than 1 h. Conclusions: This method is a rapid, reliable, and scalable solution for detecting human norovirus in POCT settings for both clinical diagnosis and public health surveillance. Full article
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27 pages, 40365 KiB  
Article
Formation of Hybrid Spherical Silica Particles Using a Novel Alkoxy-Functional Polysilsesquioxane Macromonomer as a Precursor in an Acid-Catalyzed Sol-Gel Process
by Anna Kowalewska, Kamila Majewska-Smolarek, Agata S. Herc, Sławomir Kaźmierski and Joanna Bojda
Materials 2025, 18(14), 3357; https://doi.org/10.3390/ma18143357 - 17 Jul 2025
Viewed by 346
Abstract
The interest in macromolecular alkoxysilyl-functionalized hybrids (self-assembling or nanostructured), which could be used as precursors in biomimetic silica precipitation and for the synthesis of hollow spherical silica particles, is growing. Nevertheless, reports on all-organosilicon systems for bioinspired silica precipitation are scarce. Therefore, a [...] Read more.
The interest in macromolecular alkoxysilyl-functionalized hybrids (self-assembling or nanostructured), which could be used as precursors in biomimetic silica precipitation and for the synthesis of hollow spherical silica particles, is growing. Nevertheless, reports on all-organosilicon systems for bioinspired silica precipitation are scarce. Therefore, a new kind of polyalkoxysilane macromonomer–linear polysilsesquioxane (LPSQ) of ladder-like backbone, functionalized in side chains with trimethoxysilyl groups (LPSQ-R-Si(OMe)3), was designed following this approach. It was obtained by photoinitiated thiol-ene addition of 3-mercaptopropyltrimethoxysilane to the vinyl-functionalized polysilsesquioxane precursor, carried out in situ in tetraethoxysilane (TEOS). The mixture of LPSQ-R-Si(OMe)3 and TEOS (co-monomers) was used in a sol–gel process conducted under acidic conditions (0.5 M HCl/NaCl) in the presence of Pluronic® F-127 triblock copolymer as a template. LPSQ-R-Si(OMe)3 played a key role for the formation of microparticles of a spherical shape that were formed under the applied conditions, while their size (as low as 3–4 µm) was controlled by the stirring rate. The hybrid materials were hydrophobic and showed good thermal and oxidative stability. Introduction of zinc acetate (Zn(OAc)2) as an additive in the sol–gel process influenced the pH of the reaction medium, which resulted in structural reinforcement of the hybrid microparticles owing to more effective condensation of silanol groups and a relative increase of the content of SiO2. The proposed method shows directions in designing the properties of hybrid materials and can be translated to other silicon–organic polymers and oligomers that could be used to produce hollow silica particles. The established role of various factors (macromonomer structure, pH, and stirring rate) allows for the modulation of particle morphology. Full article
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30 pages, 1106 KiB  
Review
Transcription-Coupled Nucleotide Excision Repair: A Faster Solution or the Only Option?
by Andriy Khobta and Leen Sarmini
Biomolecules 2025, 15(7), 1026; https://doi.org/10.3390/biom15071026 - 16 Jul 2025
Viewed by 471
Abstract
A branch of the nucleotide excision repair (NER) pathway, transcription-coupled repair (TCR or TC-NER) specifically operates on the template DNA strand of actively transcribed genes. Initiated by stalling of elongating RNA polymerase complexes at damaged sites, TC-NER has historically been viewed as “accelerated [...] Read more.
A branch of the nucleotide excision repair (NER) pathway, transcription-coupled repair (TCR or TC-NER) specifically operates on the template DNA strand of actively transcribed genes. Initiated by stalling of elongating RNA polymerase complexes at damaged sites, TC-NER has historically been viewed as “accelerated repair”, arguably necessary for the maintenance of vital transcription function. Conversely, the conventional “global genome” (GG-NER) mechanism, operating throughout the genome, is usually regarded as a much slower process, even though it has long been found that differences in repair kinetics between transcribed DNA and the rest of the genome are not manifested for all structural types of DNA damage. Considering that damage detection is the rate-limiting step of overall repair reactions in most cases and that the mechanisms of the initial recognition of modified DNA structure are fundamentally different between TC-NER and GG-NER, it is suggestive to attribute the observed kinetic differences to different damage spectra recognized by the two pathways. This review summarizes current knowledge on the differential requirements of TC-NER and GG-NER towards specific damage types, based on their structural rather than spatial characteristics, and highlights some common features of DNA modifications repaired preferentially or exclusively by TC-NER, while evading other repair mechanisms. Full article
(This article belongs to the Special Issue Molecular Mechanisms in DNA and RNA Damage and Repair)
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12 pages, 2721 KiB  
Article
Conjugated Polyaniline–Phytic Acid Polymer Derived 3D N, P-Doped Porous Carbon as a Metal-Free Electrocatalyst for Zn–Air Batteries
by Wanting Xiong, Yifan Kong, Jiangrong Xiao, Tingting Wang and Xiaoli Chen
Catalysts 2025, 15(7), 683; https://doi.org/10.3390/catal15070683 - 14 Jul 2025
Viewed by 383
Abstract
The development of cost-effective and scalable air/oxygen electrode materials is crucial for the advancement of Zn–air batteries (ZABs). Porous carbon materials doped with heteroatoms have attracted considerable attention in energy and environmental fields because of their tunable nanoporosity and high electrical conductivity. In [...] Read more.
The development of cost-effective and scalable air/oxygen electrode materials is crucial for the advancement of Zn–air batteries (ZABs). Porous carbon materials doped with heteroatoms have attracted considerable attention in energy and environmental fields because of their tunable nanoporosity and high electrical conductivity. In this work, we report the synthesis of a three-dimensional (3D) N and P co-doped porous carbon (PA@pDC-1000), derived from a conjugated polyaniline–phytic acid polymer. The cross-linked, rigid conjugated polymeric framework plays a crucial role in maintaining the integrity of micro- and mesoporous structures and promoting graphitization during carbonization. As a result, the material exhibits a hierarchical pore structure, a high specific surface area (1045 m2 g−1), and a large pore volume (1.02 cm3 g−1). The 3D N, P co-doped PA@pDC-1000 catalyst delivers a half-wave potential of 0.80 V (vs. RHE) and demonstrates a higher current density compared to commercial Pt/C. A primary ZAB utilizing this material achieves an open-circuit voltage of 1.51 V and a peak power density of 217 mW cm−2. This metal-free, self-templating presents a scalable route for the generating and producing of high-performance oxygen reduction reaction catalysts for ZABs. Full article
(This article belongs to the Special Issue Electrocatalysis and Photocatalysis in Redox Flow Batteries)
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10 pages, 1130 KiB  
Article
DNA Damage Induced by Fast Neutron and Gamma Rays Evaluated Using qPCR
by Youichirou Matuo, Miyabi Yanami, Shingo Tamaki, Yoko Akiyama, Yoshinobu Izumi, Fuminobu Sato, Isao Murata and Kikuo Shimizu
Quantum Beam Sci. 2025, 9(3), 23; https://doi.org/10.3390/qubs9030023 - 7 Jul 2025
Viewed by 223
Abstract
We developed a novel dosimetric method using DNA molecules as a radiation sensor. The amount of neutron or gamma rays irradiated DNA damage was determined by evaluating the amount of DNA serving as a template for qPCR. The absorbed doses in the samples [...] Read more.
We developed a novel dosimetric method using DNA molecules as a radiation sensor. The amount of neutron or gamma rays irradiated DNA damage was determined by evaluating the amount of DNA serving as a template for qPCR. The absorbed doses in the samples were estimated using the tally of the “t-product” in the data from the PHITS Monte Carlo particle transport simulation code. The neutron fluence for each sample was measured using the niobium activation reaction 93Nb (n, 2n) 92mNb, and the absorbed dose per neutron fluence was estimated to be 7.1 × 10−11 Gy/(n/cm2). Based on the PHITS modeling, the effects of neutron beams are attributed to the combination of proton and alpha particle beams. The results from qPCR showed that neutrons caused more DNA damage than gamma rays. The qPCR method demonstrated that neutron irradiation caused 1.13-fold more DNA damage compared to gamma ray irradiation; however, this result did not show a statistically significant difference. This method we developed, using DNA molecules as a radiation sensor, may be useful for biodosimetry. Full article
(This article belongs to the Section Medical and Biological Applications)
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14 pages, 2179 KiB  
Article
One-Pot Anodic Electrodeposition of Dual-Cation-Crosslinked Sodium Alginate/Carboxymethyl Chitosan Interpenetrating Hydrogel with Vessel-Mimetic Heterostructures
by Xuli Li, Yuqing Qu, Yong Zhang, Pei Chen, Siyu Ding, Miaomiao Nie, Kun Yan and Shefeng Li
J. Funct. Biomater. 2025, 16(7), 235; https://doi.org/10.3390/jfb16070235 - 26 Jun 2025
Viewed by 656
Abstract
This study develops a one-pot anodic templating electrodeposition strategy using dual-cation-crosslinking and interpenetrating networks, coupled with pulsed electrical signals, to fabricate a vessel-mimetic multilayered tubular hydrogel. Typically, the anodic electrodeposition is performed in a mixture of sodium alginate (SA) and carboxymethyl chitosan (CMC), [...] Read more.
This study develops a one-pot anodic templating electrodeposition strategy using dual-cation-crosslinking and interpenetrating networks, coupled with pulsed electrical signals, to fabricate a vessel-mimetic multilayered tubular hydrogel. Typically, the anodic electrodeposition is performed in a mixture of sodium alginate (SA) and carboxymethyl chitosan (CMC), with the ethylenediaminetetraacetic acid calcium disodium salt hydrate (EDTA·Na2Ca) incorporated to provide a secondary ionic crosslinker (i.e., Ca2+) and modulate the cascade reaction diffusion process. The copper wire electrodes serve as templates for electrochemical oxidation and enable a copper ion (i.e., Cu2+)-induced tubular hydrogel coating formation, while pulsed electric fields regulate layer-by-layer deposition. The dual-cation-crosslinked interpenetrating hydrogels (CMC/SA-Cu/Ca) exhibit rapid growth rates and tailored mechanical strength, along with excellent antibacterial performance. By integrating the unique pulsed electro-fabrication with biomimetic self-assembly, this study addresses challenges in vessel-mimicking structural complexity and mechanical compatibility. The approach enables scalable production of customizable multilayered hydrogels for artificial vessel grafts, smart wound dressings, and bioengineered organ interfaces, demonstrating broad biomedical potential. Full article
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19 pages, 5616 KiB  
Communication
A Poly(methacrolein-co-methacrylamide)-Based Template Anchoring Strategy for the Synthesis of Fluorescent Molecularly Imprinted Polymer Nanoparticles for Highly Selective Serotonin Sensing
by Madhav Biyani, Mizuki Matsumoto and Yasuo Yoshimi
Nanomaterials 2025, 15(13), 977; https://doi.org/10.3390/nano15130977 - 24 Jun 2025
Viewed by 413
Abstract
Neurotransmitters such as serotonin regulate key physiological and cognitive functions, yet real-time detection remains challenging due to the limitations of conventional techniques like amperometry and microdialysis. Fluorescent molecularly imprinted polymer nanoparticles (fMIP-NPs) offer a promising alternative and are typically synthesized via solid-phase synthesis, [...] Read more.
Neurotransmitters such as serotonin regulate key physiological and cognitive functions, yet real-time detection remains challenging due to the limitations of conventional techniques like amperometry and microdialysis. Fluorescent molecularly imprinted polymer nanoparticles (fMIP-NPs) offer a promising alternative and are typically synthesized via solid-phase synthesis, in which template molecules are covalently immobilized on a solid support to enable site-specific imprinting. However, strong template–template interactions during this process can compromise selectivity. To overcome this, we incorporated a poly(methacrolein-co-methacrylamide)-based template anchoring strategy to minimize undesired template interactions and enhance imprinting efficiency. We optimized the synthesis of poly(methacrolein-co-methacrylamide) under three different conditions by varying the monomer compositions and reaction parameters. The poly(methacrolein-co-methacrylamide) synthesized under Condition 3 (5:1 methacrolein-to-methacrylamide molar ratio, 1:150 initiator-to-total monomer ratio, and 4.59 M total monomer concentration) yielded the most selective fMIP-NPs, whose fluorescence intensity increased with an increase in serotonin concentration, rising by up to 37% upon serotonin binding. This improvement is attributed to higher aldehyde functionality in the poly(methacrolein-co-methacrylamide) which enhances template immobilization and generates a rigid imprinted cavity to interact with serotonin. These findings suggest that the developed fMIP-NPs hold significant potential as imaging probes for neurotransmitter detection, contributing to advanced studies in neural network analysis. Full article
(This article belongs to the Special Issue Recent Advances in the Development of Nano-Biomaterials)
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16 pages, 3206 KiB  
Article
Rapid Detection of Chlorpheniramine Maleate in Human Blood and Urine Samples Based on NiCoP/PVP/PAN/CNFs Electrochemiluminescence Sensor
by Yi Zhang, Jiayu Zhao, Jiaxing Chen, Tingfan Tang and Hao Cheng
Molecules 2025, 30(12), 2603; https://doi.org/10.3390/molecules30122603 - 16 Jun 2025
Viewed by 418
Abstract
Chlorpheniramine maleate (CPM) is a first-generation antihistamine that is frequently used to treat allergic reactions. However, excessive consumption presents potential health risks. Therefore, it is crucial to develop a quick and precise technique for identifying CPM levels. In this study, nickel cobalt phosphide [...] Read more.
Chlorpheniramine maleate (CPM) is a first-generation antihistamine that is frequently used to treat allergic reactions. However, excessive consumption presents potential health risks. Therefore, it is crucial to develop a quick and precise technique for identifying CPM levels. In this study, nickel cobalt phosphide (NiCoP), a binary metal phosphide, was successfully incorporated into carbon nanofibers. This involved creating a pore structure by adding polyvinylpyrrolidone (PVP) as a pore-forming template to a polyacrylonitrile (PAN) substrate via electrostatic spinning. An innovative electrochemiluminescent sensor for CPM detection was constructed using NiCoP/PVP/PAN carbon nanofibers (NiCoP/PVP/PAN/CNFs). Under optimal conditions, the electrochemical behavior of CPM was studied using NiCoP/PVP/PAN/CNF-modified working electrodes. These findings demonstrate that the three-dimensional porous network architecture of NiCoP/PVP/PAN/CNFs enhances the conductive properties of the material. Consequently, an electrochemical optical sensor fabricated using this structure exhibited remarkable performance. The linear detection range of the sensor was 1 × 10−8–7 × 10−5 mol/L, and the detection limit was 7.8 × 10−10 mol/L. When human urine and serum samples were examined, the sensor was found to have a high recovery rate (94.35–103.36%), which is promising for practical applications. Full article
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22 pages, 2567 KiB  
Review
Non-Platinum Group Metal Oxygen Reduction Catalysts for a Hydrogen Fuel Cell Cathode: A Mini-Review
by Naomi Helsel and Pabitra Choudhury
Catalysts 2025, 15(6), 588; https://doi.org/10.3390/catal15060588 - 13 Jun 2025
Viewed by 952
Abstract
Although platinum-based catalysts are highly effective for the oxygen reduction reaction (ORR) in proton exchange membrane fuel cells (PEMFCs), their high cost and scarcity limit large-scale commercialization. As a result, platinum group metal-free catalysts—particularly Fe-N-C materials—have received increasing attention as promising alternatives. Despite [...] Read more.
Although platinum-based catalysts are highly effective for the oxygen reduction reaction (ORR) in proton exchange membrane fuel cells (PEMFCs), their high cost and scarcity limit large-scale commercialization. As a result, platinum group metal-free catalysts—particularly Fe-N-C materials—have received increasing attention as promising alternatives. Despite significant progress, no platinum-group metal-free (PGM-free) catalyst has yet matched the performance and durability of commercial Pt/C in acidic media. Recent advances in synthesis strategies, however, have led to notable improvements in the activity, stability, and active site density of Fe-N-C catalysts. This review highlights key synthesis approaches, including pyrolysis, MOF-derived templates, and cascade anchoring, and discusses how these methods contribute to improved nitrogen coordination, electronic structure modulation, and active site engineering. The continued refinement of these strategies, alongside improved catalyst screening techniques, is essential for closing the performance gap and enabling the practical deployment of non-PGM catalysts in PEMFC technologies. Full article
(This article belongs to the Special Issue Feature Review Papers in Electrocatalysis)
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15 pages, 3620 KiB  
Article
ZIF-L/PBA-Derived Self-Supporting Ni-Doped CoFeP Electrocatalysts for Bifunctional Water Splitting
by Lanqi Wang, Hui Ni, Jianing Yu, Jingyuan Zhang and Bin Zhao
Catalysts 2025, 15(6), 576; https://doi.org/10.3390/catal15060576 - 10 Jun 2025
Viewed by 1022
Abstract
In recent years, transition metal-based catalytic materials have garnered considerable attention, particularly those exhibiting high catalytic efficiency toward both the oxygen evolution reaction (OER) and hydrogen evolution reaction (HER). In this work, a self-supporting ternary transition metal phosphide (CoFeNi0.2P) with a [...] Read more.
In recent years, transition metal-based catalytic materials have garnered considerable attention, particularly those exhibiting high catalytic efficiency toward both the oxygen evolution reaction (OER) and hydrogen evolution reaction (HER). In this work, a self-supporting ternary transition metal phosphide (CoFeNi0.2P) with a hierarchical structure was synthesized using the Prussian blue analogue (PBA)/zeolitic imidazolate framework-L (ZIF-L) template. Benefiting from the hierarchical structure of the PBA/ZIF-L precursor and the electronic structure modulation induced by Ni doping, the resulting CoFeNi0.2P demonstrates impressive bifunctional electrocatalytic activity. Specifically, in 1 M KOH electrolyte, the CoFeNi0.2P catalyst requires an overpotential of only 88 mV to deliver 10 mA cm−2 for the HER and 248 mV to achieve 50 mA cm−2 for the OER. Moreover, it demonstrates satisfactory stability toward both the HER and OER. When integrated into a two-electrode electrolyzer, CoFeNi0.2P enables a current density of 10 mA cm−2 at a cell voltage of 1.59 V, maintaining robust performance for over 25 h. This study provides a feasible strategy for the rational design of hierarchical electrocatalysts for efficient overall water splitting. Full article
(This article belongs to the Special Issue Two-Dimensional (2D) Materials in Catalysis)
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14 pages, 22180 KiB  
Article
Preparation of a Nano-Laminated Sc2SnC MAX Phase Coating on SiC Fibers via the Molten Salt Method
by Chenyang Wang, Lexiang Yin, Peng Li and Qing Huang
Materials 2025, 18(11), 2633; https://doi.org/10.3390/ma18112633 - 4 Jun 2025
Viewed by 503
Abstract
The incorporation of MAX phase interface layers into silicon carbide (SiC) composites has been shown to significantly enhance mechanical properties, particularly under irradiation conditions. However, conventional Ti-based MAX phases suffer from thermal instability and tend to decompose at high temperatures. In this work, [...] Read more.
The incorporation of MAX phase interface layers into silicon carbide (SiC) composites has been shown to significantly enhance mechanical properties, particularly under irradiation conditions. However, conventional Ti-based MAX phases suffer from thermal instability and tend to decompose at high temperatures. In this work, an Sc2SnC coating was successfully synthesized onto the surface of SiC fibers (SiCf) via an in situ reaction between metals and pyrolytic carbon (PyC) in a molten salt environment. The PyC layer, pre-deposited by chemical vapor deposition (CVD), served as both a carbon source and a structural template. Characterization by SEM, XRD, and Raman spectroscopy confirmed the formation of Sc2SnC coatings with a distinctive hexagonal flake-like morphology, accompanied by an internal ScCx intermediate layer. By turning the Sc-to-Sn ratio in the molten salt, coatings with varied morphologies were achieved. ScCx was identified as a critical intermediate phase in the synthesis process. The formation of numerous defects during the reaction enhanced element diffusion, resulting in preferential growth orientations and diverse grain structures in the Sc2SnC coating. Full article
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12 pages, 3968 KiB  
Article
Bridged Mesoporous Oxo-Phosphonates: A General Strategy Toward Functional, Hybrid Materials
by Elodie Gioan, Zijie Su, Yanhui Wang, Jeremy Rodriguez, Karim Bouchmella and Johan G. Alauzun
Molecules 2025, 30(11), 2459; https://doi.org/10.3390/molecules30112459 - 4 Jun 2025
Viewed by 507
Abstract
Combining the properties of organic and inorganic components with high surface areas and large pore volumes opens up countless possibilities for designing materials tailored to a wide range of advanced applications. As the majority of mesoporous hybrid materials are siliceous, the development of [...] Read more.
Combining the properties of organic and inorganic components with high surface areas and large pore volumes opens up countless possibilities for designing materials tailored to a wide range of advanced applications. As the majority of mesoporous hybrid materials are siliceous, the development of cost-effective synthetic approaches to produce water-stable hybrids with controlled porosity and functionality remains essential. Herein, we describe an original strategy for the synthesis of bridged mesoporous titania–bisphosphonate hybrids based on a one-step, template-free, non-hydrolytic sol–gel process. The reaction between Ti(OiPr)4 and several flexible or rigid bisphosphonate esters, in the presence of acetic anhydride (Ac2O) leads to the formation of TiO2 anatase nanorods interconnected by fully condensed bisphosphonate groups. The general method that we depict is quantitative and low cost. All materials are mesoporous with very high specific surface areas (up to 520 m2·g⁻1) and pore volumes (up to 0.93 cm3·g⁻1). Full article
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16 pages, 3770 KiB  
Article
Novel Viral Sequences in a Patient with Cryptogenic Liver Cirrhosis Revealed by Serum Virome Sequencing
by Xiaoan Zhang, Ida X. Fan, Yanjuan Xu, Jody Rule, Long Ping Victor Tse, Mahmoud Reza Pourkarim, William M. Lee, Adrian M. Di Bisceglie and Xiaofeng Fan
Viruses 2025, 17(6), 812; https://doi.org/10.3390/v17060812 - 3 Jun 2025
Viewed by 661
Abstract
Clinical studies indicate the etiology of liver disease to be unknown in 5% to 30% of patients. A long-standing hypothesis is the existence of unknown viruses beyond hepatitis A through E virus. We conducted serum virome sequencing in nine patients with cryptogenic liver [...] Read more.
Clinical studies indicate the etiology of liver disease to be unknown in 5% to 30% of patients. A long-standing hypothesis is the existence of unknown viruses beyond hepatitis A through E virus. We conducted serum virome sequencing in nine patients with cryptogenic liver disease and identified eight contigs that could not be annotated. One was determined to be a contaminant, while two of seven contigs from an individual (Patient 3) were validated by reverse transcription and polymerase chain reaction (RT-PCR) and Sanger sequencing. The possibility of contamination was completely excluded through PCR, with templates extracted using different methods from samples taken at different time points. One of the contigs, Seq260, was characterized as negative-sense single-stranded DNA via enzymatic digestion and genome walking. Digital-droplet PCR revealed the copy number of Seq260 to be low: 343 copies/mL. Seq260-based nested PCR screening was negative in 200 blood donors and 225 patients with liver disease with/without known etiologies. None of the seven contigs from Patient 3 was mapped onto 118,713 viral metagenomic data. Conclusively, we discovered seven unknown contigs from a patient with cryptogenic liver cirrhosis. These sequences are likely from a novel human virus with a negative-sense, linear single-stranded DNA genome. Full article
(This article belongs to the Section Human Virology and Viral Diseases)
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14 pages, 2930 KiB  
Article
Bi-Interfacial Electron Modulation in Co9S8/FeCoS2 Heterostructures Anchored on Bamboo-Derived Carbon Quasi-Aerogel for High-Performance Hydrogen Evolution
by Wenjing He, Jianliang Cao, Xinliang Zhou, Ning Zhang, Yuzhu Qi, Jin Li, Naiteng Wu and Xianming Liu
Gels 2025, 11(6), 390; https://doi.org/10.3390/gels11060390 - 25 May 2025
Viewed by 352
Abstract
Hydrogen energy as a sustainable alternative to fossil fuels necessitates the development of cost-effective and efficient electrocatalysts for the hydrogen evolution reaction (HER). While transition metal sulfides have shown promise, their practical application is hindered by insufficient active sites, poor conductivity, and suboptimal [...] Read more.
Hydrogen energy as a sustainable alternative to fossil fuels necessitates the development of cost-effective and efficient electrocatalysts for the hydrogen evolution reaction (HER). While transition metal sulfides have shown promise, their practical application is hindered by insufficient active sites, poor conductivity, and suboptimal hydrogen adsorption kinetics. Herein, we present a heterointerface engineering strategy to construct Co9S8/FeCoS2 heterojunctions anchored on bamboo fiber-derived nitrogen-doped porous carbon (Co9S8/FeCoS2/BFPC) through hydrothermal synthesis and subsequent carbonization. BFPC carbon quasi-aerogel support not only offers a high surface area and conductive pathways but also enables uniform dispersion of active sites through nitrogen doping, which simultaneously optimizes electron transfer and mass transport. Experimental results demonstrate exceptional HER performance in alkaline media, achieving a low overpotential of 86.6 mV at 10 mA cm−2, a Tafel slope of 68.87 mV dec−1, and remarkable stability over 73 h of continuous operation. This work highlights the dual advantages of heterointerface design and carbon substrate functionalization, providing a scalable template for developing noble metal-free electrocatalysts for energy conversion technologies. Full article
(This article belongs to the Section Gel Chemistry and Physics)
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11 pages, 2387 KiB  
Article
A Convenient Fluorogenic Detection Strategy for Phosphorothioate Modification of DNA Through Photocatalytic Oligonucleotide-Templated Reaction
by Nannan Jing, Yantian Qin, Xinli Fan, Qian Wang, Jing Wang, Fuping You and Xinjing Tang
Biomolecules 2025, 15(6), 752; https://doi.org/10.3390/biom15060752 - 23 May 2025
Viewed by 419
Abstract
DNA phosphorothioate (PT) modifications, characterized by the replacement of a non-bridging phosphate oxygen atom with a sulfur atom, are widely observed in bacterial genomes. Sensitive detection of phosphorothioate is crucial for elucidating their biological roles and functions. Herein, we developed an innovative method [...] Read more.
DNA phosphorothioate (PT) modifications, characterized by the replacement of a non-bridging phosphate oxygen atom with a sulfur atom, are widely observed in bacterial genomes. Sensitive detection of phosphorothioate is crucial for elucidating their biological roles and functions. Herein, we developed an innovative method that leverages oligonucleotide-templated reactions (OTRs) and fluorogenic oligonucleotide probes. By optimizing temperature, probe sequence length, and the relative distance between PT position and the fluorophore probe, we achieved sensitive detection for DNA PT modifications through fluorogenic signal amplification, which provides an efficient and cost-effective approach for sensitive detection of phosphorothioate-modified DNA. Full article
(This article belongs to the Section Chemical Biology)
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