Search Results (57)

Plant Parasitic Nematodes (PPNs) are a major problem in agriculture. Damage caused by PPNs has been estimated at USD 80–157 billion annually. The estimates could be even worse in the future in the context of a growing world population in a climate change scenario and with the removal/reduction in the use of some nematodicides due to the strong ecological impact. Biocontrol Agents (BCAs) currently constitute only 8.8% of the general pesticide market. With a view to an ecological transition, the transition from pesticides to biopesticides represents an important challenge that appears necessary not only for organic farming, but also in so-called integrated agriculture. Among the possible BCAs, microorganisms, and in particular yeast, which enjoys the GRAS (Generally Recognized As Safe) status, have the advantage of being able to be produced on a large scale by fermentation on waste substrates at low cost. In this paper, as proof of concept we constructed yeast strains expressing short hairpin RNAs (shRNAs) targeting the daf-16 gene in C. elegans. We demonstrate that oral ingestion of yeast cells expressing DAF16 shRNA is efficient in lowering daf-16 expression and lifespan, suggesting a sustainable RNA interference-based strategy to inhibit the development of PPNs. Full article

Nanotechnology is emerging as an innovative and sustainable agricultural approach that minimizes environmental impacts by developing nanostructured materials to promote plant growth and combat plant-parasitic nematodes (PPNs). Plant-based nanoparticles (NPs) are attracting increasing attention as they are more environmentally friendly, economical and biocompatible compared to traditional chemical and physical synthesis methods. The ability of plants to reduce and stabilize metal ions and form NPs of specific size and morphology through their biochemical content offers great advantages for agricultural applications. Phytochemicals produced by plants enable the biological synthesis of metal and metal oxide NPs by acting as reducing agents and coating agents in NP synthesis. The effects of plant-based NPs in nematode control are based on mechanisms such as the disruption of the nematode cuticle, induction of oxidative stress and interference with parasite metabolism. Several plant species have been investigated for the synthesis of metal and metal oxide nanoparticles such as silver (Ag-NPs), nickel oxide (NiO-NPs), zinc oxide (ZnO-NPs), copper oxide (CuO-NPs) and iron (Fe-NPs). These biologically synthesized NPs show potent biological activity against important PPNs such as Meloidogyne spp., Pratylenchus spp. and Heterodera spp. The integration of plant-derived NPs into agricultural systems has significant potential for plant growth promotion, nematode suppression and soil health improvement. This review highlights their role in reducing environmental impact in agricultural applications by examining the sustainable synthesis processes of plant-based NPs. Full article

Considerable losses are inflicted by plant-parasitic nematodes (PPNs) due to their obligate parasitism; serious damage occurs in many susceptible crops, and the parasites have a broad distribution worldwide. As most PPNs have a subterranean nature, the complexity of soils in the plant rhizosphere and the structures and functions of the soil food webs necessitate a grasp of the relevant biotic/abiotic factors in order to ensure their effective control. Such factors frequently lead to the inconsistent performance and untapped activity of applied bionematicides, hindering efforts to develop reliable ones. Research efforts that take these factors into account to back the usage of these bionematicides by combining the disease-suppressive activities of two or more agricultural inputs are highlighted herein. These combinations should be designed to boost useful colonization in the rhizosphere, persistent expression of desirable traits under a wide range of soil settings, and/or antagonism to a larger number of plant pests/pathogens relative to individual applications. Relevant ecological/biological bases with specific settings for effective PPN management are exemplified. Determining the relative sensitivity or incompatibility of some biologicals entails studying their combinations and reactions. Such studies, as suggested herein, should be conducted on a case-by-case basis to avoid unsatisfactory outputs. These studies will enable us to accurately define certain outputs, namely, the synergistic, additive, neutral, and antagonistic interactions among the inputs. In optimizing the efficiencies of these inputs, researchers should consider their multi-functionality and metabolic complementarity. Despite previous research, the market currently lacks these types of safe and effective products. Hence, further explorations of novel integrated pest management plans that boost synergy and coverage to control multiple pathogens/pests on a single crop are required. Also, setting economic incentives and utilizing a standardized regulation that examines the authentic risks of biopesticides are still called for in order to ease cost-effective formulation, registration, farmer awareness, and usage worldwide. On the other hand, tank mixing that ensures legality and avoids physical and chemical agro-input-based incompatibilities can also provide superior merits. The end in view is the unraveling of the complexities of interactions engaged with in applying multiple inputs to develop soundly formulated, safe, and effective pesticides. Sophisticated techniques should be incorporated to overcome such complexities/limitations. These techniques would engage microencapsulation, nanopesticides, volatile organic compounds as signals for soil inhabitants, bioinformatics, and RNA-Seq in pesticide development. Full article

Rhizosphere microbes, particularly bacteria, are essential for controlling plant-parasitic nematodes (PPNs) through various mechanisms. However, the plant’s age and the genetic composition of nematode populations can significantly influence the inhibitory effectiveness of these microbes against the beet cyst nematode Heterodera schachtii. In this study, rhizosphere microbes were isolated from 39-day-old and 69-day-old resistant oilseed radish plants to evaluate their impact on the penetration of the second-stage juveniles (J2s) originating from four genetically distinct H. schachtii populations. The suppression of J2s penetration by the attached microbes varied across the nematode populations, which displayed differing levels of aggressiveness toward the resistant oilseed radish. Furthermore, differences in the alpha and beta diversity of rhizosphere bacteria were observed between the 39-day-old and 69-day-old plants, leading to variations in the bacterial attachment among the four nematode populations. In summary, the effectiveness of resistant catch crops against H. schachtii is influenced by the pathogenicity of the nematode populations and their interactions with the rhizosphere microbial community shaped by the plant’s age. Full article

Agricultural soil environments contain different types of nematodes in all trophic levels that aid in balancing the soil food web. Beneficial free-living nematodes (FLNs) consist of bacterivores, fungivores, predators, and omnivores that help in the mineralization of the soil and the top-down control of harmful plant-parasitic nematodes (PPNs). Annually, USD 125 billion in worldwide crop losses are caused by PPNs, making them a plant pathogen of great concern for growers. Farmers have started to implement the use of cover crops in agricultural systems for the protection and enrichment of soil but research on how different cover crops affect nematode populations is lacking and in demand. This study aims to determine the effects of legume and grass cover crops, Cowpea (Vigna unguiculata) and Pearl Millet (Pennisetum glaucum), as well as their mixture on the abundance and diversity of FLN and PPN populations. Soil samples were collected at the time of cover crop maturity and spinach harvest to analyze nematode communities using both morphological and DNA metabarcoding analysis. The results showed that the application of Cowpea and Pearl Millet as well as their mixture in a spinach agricultural system led to the control of PPNs and proliferation of FLN communities, with each cover crop treatment demonstrating different advantages for the various nematode feeding groups. Soil property analysis did not show a significant difference except for magnesium and total nitrogen levels, which were significantly correlated with nematode community composition. The overall findings of our study indicate that the choice of cover crop implementation by growers for spinach cultivation should be based on specific soil health conditions, which in turn promote soil fertility and a healthy nematode community. Full article

Accurate identification and estimation of the population densities of microscopic, soil-dwelling plant-parasitic nematodes (PPNs) are essential, as PPNs cause significant economic losses in agricultural production systems worldwide. This study presents a comprehensive review of emerging techniques used for the identification of PPNs, including morphological identification, molecular diagnostics such as polymerase chain reaction (PCR), high-throughput sequencing, meta barcoding, remote sensing, hyperspectral analysis, and image processing. Classical morphological methods require a microscope and nematode taxonomist to identify species, which is laborious and time-consuming. Alternatively, quantitative polymerase chain reaction (qPCR) has emerged as a reliable and efficient approach for PPN identification and quantification; however, the cost associated with the reagents, instrumentation, and careful optimisation of reaction conditions can be prohibitive. High-throughput sequencing and meta-barcoding are used to study the biodiversity of all tropical groups of nematodes, not just PPNs, and are useful for describing changes in soil ecology. Convolutional neural network (CNN) methods are necessary to automate the detection and counting of PPNs from microscopic images, including complex cases like tangled nematodes. Remote sensing and hyperspectral methods offer non-invasive approaches to estimate nematode infestations and facilitate early diagnosis of plant stress caused by nematodes and rapid management of PPNs. This review provides a valuable resource for researchers, practitioners, and policymakers involved in nematology and plant protection. It highlights the importance of fast, efficient, and robust identification protocols and decision-support tools in mitigating the impact of PPNs on global agriculture and food security. Full article

The prevalence of plant parasitic nematodes (PPN) in the Irish peatlands was investigated in five different peatland habitats—raised bog, cutover scrub/woodlands, fens and peat grasslands, which were further sub-categorised into fourteen different sub-habitats. Within the raised bog habitat were healthy bog hummock (HBH), healthy bog lawn (HBL), degraded bog hummock (DBH) and degraded bog lawn (DBL) and the fen habitats were fen peat (FP) and rich fen peat (R-FP). Cutover scrub or woodland habitat included cutover scrub rewetted (C-RW), cutover scrub non-rewetted (C-NRW), woodlands rewetted (W-RW) and woodlands non-rewetted (W-NRW). Grassland included wasted peat (WP), rough grazing (RG-I) and improved fen peat grassland (IFPG-RW and IFPG-NRW). Soil samples from peatlands were all collected between July and December 2023 when the temperature ranged from 12 to 20 °C. One half of each sample was used for molecular nematode analysis and the other half for morphological identification of nematodes. For the morphological identification, a specific nematode extraction protocol was optimised for peatland soils, and the extracted nematodes were fixed onto slides to be studied under a high-power light microscope. Subsequently, the other part of the soil was processed to isolate total DNA, from which the 18S rRNA gene was sequenced for the identification of nematode taxa. The extracted DNA was also used for randomly amplified polymorphic DNA (RAPD) fingerprinting analysis to determine banding patterns that could classify different bog habitats based on PPN random primers. Compared to that in the climax habitats (HBH, HBL, DBH, DBL, FP, R-FP), PPN prevalence was recorded as being higher in grasslands (WP, RG-I, IFPG-RW and IFPG-NRW) and scrub/woodland ecosystems (C-RW, C-NRW, W-RW, W-NRW). The results indicate that nematode populations are different across the various bog habitats. Emerging and current quarantine PPN belonging to the families Pratylenchidae, Meloidogynidae, Anguinidae and Heteroderidae were noted to be above the threshold limits mentioned under EPPO guidelines, in grassland and wooded peatland habitats. Future actions for PPN management may need to be considered, along with the likelihood that these PPN might impact future paludiculture and other crops and trees growing in nearby agricultural lands. Full article

Plant parasitic nematodes (PPNs), such as Meloidogyne spp., Heterodera spp. and Pratylenchus spp., are obligate parasites on a wide range of crops, causing significant agricultural production losses worldwide. These PPNs mainly feed on and within roots, impairing both the below-ground and the above-ground parts, resulting in reduced plant performance. Plants have developed a multi-component defence mechanism against diverse pathogens, including PPNs. Several natural molecules, ranging from cell wall components to secondary metabolites, have been found to protect plants from PPN attack by conferring nematode-specific resistance. Recent advances in omics analytical tools have encouraged researchers to shed light on nematode detection and the biochemical defence mechanisms of plants during nematode infection. Here, we discuss the recent progress on revealing the nematode-associated molecular patterns (NAMPs) and their receptors in plants. The biochemical defence responses of plants, comprising cell wall reinforcement; reactive oxygen species burst; receptor-like cytoplasmic kinases; mitogen-activated protein kinases; antioxidant activities; phytohormone biosynthesis and signalling; transcription factor activation; and the production of anti-PPN phytochemicals are also described. Finally, we also examine the role of epigenetics in regulating the transcriptional response to nematode attack. Understanding the plant defence mechanism against PPN attack is of paramount importance in developing new, effective and sustainable control strategies. Full article

A survey of plant parasitic nematodes was carried out in 650 garlic fields in Korea from 2020 to 2022. Migratory endoparasite nematodes (Ditylenchus sp.) were recovered from 6% of the garlic samples, with an average density of 494 individuals per garlic bulb. The morphological characteristics of males and females from the 2022 survey were very similar to D. destructor, but D. dipsaci was not found. The Korean population traits have a lateral field containing six incisures, and the posterior esophagus part overlaps the intestine dorsally. PCR and DNA sequencing were performed for the D2/D3 region of the ribosomal DNA 28S and the ITS region, and the phylogenetic analysis strongly supports the monophyly of D. destructor. This is the first report of D. destructor parasitizing garlic in the Republic of Korea. In Korea, due to changes in agricultural or environmental conditions, the most damaging potential PPNs changed from D. dipsaci to D. destructor in garlic cultivation. Full article

Heterodera schachtii (Schmidt, 1871) (Nematoda: Heteroderidae) is one of the most widespread plant-parasitic nematodes (PPNs) associated with cabbages, which cause severe yield losses in cruciferous vegetables. This study aimed to improve the current understanding of the prevalence and detection of H. schachtii in the cabbage-growing areas of Niğde Province, Türkiye. Field surveys were conducted between November and December 2021, and 100 soil samples were collected immediately after cabbage harvesting. Heterodera schachtii populations were identified by morphological and morphometric methods along with Internal Transcribed Spacer of the ribosomal region (ITS-rDNA) and Cytochrome Oxidase Subunit (COI-mtDNA) sequencing. The mean body length of H. schachtii was 463 ± 7 μm, while stylet and hyaline length ranged between 20.7–27.8 μm and 20.1–32.1 μm, respectively. Nearly half of the surveyed areas were infested with H. schachtii with a 41% incidence rate. However, the Merkez District had the highest proportion of infested fields with an over 51% incidence rate. The population density was determined in 41 samples with a mean of 79.5 cysts per 250 g of soil. These results will help to determine the control and management strategies of H. schachtii. Full article

The identification of novel drug targets in plant-parasitic nematodes (PPNs) is imperative due to the loss of traditional nematicides and a lack of replacements. Chemosensation, which is pivotal for PPNs in locating host roots, has become a focus in nematode behavioral research. However, its underlying molecular basis is still indistinct in such a diverse group of PPNs. To characterize genes participating in chemosensation in the Javanese root-knot nematode Meloidogyne javanica, RNA-sequencing of the second-stage juveniles (J2s) treated with tomato root exudate (TRE) for 1 h and 6 h was performed. Genes related to chemosensation in M. javanica mainly responded to TRE treatment at 1 h. Moreover, a gene ontology (GO) analysis underscored the significance of the neuropeptide G protein-coupled receptor signaling pathway. Consequently, the repertoire of putative neuropeptides in M. javanica, including FMRFamide-like peptides (FLPs), insulin-like peptides (ILPs), and neuropeptide-like peptides (NLPs), were outlined based on a homology analysis. The gene Mjflp-14a, harboring two neuropeptides, was significantly up-regulated at 1 h TRE treatment. Through peptide synthesis and J2 treatment, one of the two neuropeptides (MjFLP-14-2) was proven to influence the J2 chemotaxis towards tomato root tips. Overall, our study reinforces the potential of nematode neuropeptides as novel targets and tools for root-knot nematode control. Full article

Plant-parasitic nematodes (PPNs) reduce the high profitability of many crops and degrade their quantitative and qualitative yields globally. Traditional nematicides and other nematode control methods are being used against PPNs. However, stakeholders are searching for more sustainable and effective alternatives with limited side effects on the environment and mankind to face increased food demand, unfavorable climate change, and using unhealthy nematicides. This review focuses on upgrading the pre-procedures of PPN control as well as novel measures for their effective and durable management strategies on economically important crops. Sound and effective sampling, extraction, identification, and counting methods of PPNs and their related microorganisms, in addition to perfecting designation of nematode–host susceptibility/resistance, form the bases for these strategies. Therefore, their related frontiers should be expanded to synthesize innovative integrated solutions for these strategies. The latter involve supplanting unsafe nematicides with a new generation of safe and reliable chemical nematicidal and bionematicidal alternatives. For better efficacy, nematicidal materials and techniques should be further developed via computer-aided nematicide design. Bioinformatics devices can reinforce the potential of safe and effective biocontrol agents (BCAs) and their active components. They can delineate the interactions of bionematicides with their targeted PPN species and tackle complex diseases. Also, the functional plan of nematicides based on a blueprint of the intended goals should be further explored. Such goals can currently engage succinate dehydrogenase, acetylcholinesterase, and chitin deacetylase. Nonetheless, other biochemical compounds as novel targets for nematicides should be earnestly sought. Commonly used nematicides should be further tested for synergistic or additive function and be optimized via novel sequential, dual-purpose, and co-application of agricultural inputs, especially in integrated pest management schemes. Future directions and research priorities should address this novelty. Meanwhile, emerging bioactivated nematicides that offer reliability and nematode selectivity should be advanced for their favorable large-scale synthesis. Recent technological means should intervene to prevail over nematicide-related limitations. Nanoencapsulation can challenge production costs, effectiveness, and manufacturing defects of some nematicides. Recent progress in studying molecular plant–nematode interaction mechanisms can be further exploited for novel PPN control given related topics such as interfering RNA techniques, RNA-Seq in BCA development, and targeted genome editing. A few recent materials/techniques for control of PPNs in durable agroecosystems via decision support tools and decision support systems are addressed. The capability and effectiveness of nematicide operation harmony should be optimized via employing proper cooperative mechanisms among all partners. Full article

The management of plant-parasitic nematodes (PPNs) still relies on traditional nematicides that threaten the environment and human health. Novel solutions are urgently needed for PPN pest management that are effective while safeguarding non-target organisms. Volatile phytochemicals belong to a structurally diverse group of bioactive metabolites that are believed to hold safer environmental characteristics than synthetic pesticides. Nonetheless, not many studies have analysed the potential environmental benefits of shifting to these novel bionematicides. In the present study, 20 phytochemical volatiles with reported nematicidal activity were compared to traditional pesticides using specific parameters of environmental and human health safety available on applied online databases and predicted in silico through specialised software. Overall, the reviewed nematicidal phytochemicals were reportedly less toxic than synthetic nematicides. They were predicted to disperse to the air and soil environmental compartments and were reported to have a lower toxicity on aquatic organisms. On the contrary, the synthetic nematicides were reportedly toxic to aquatic organisms while showing a predicted high affinity to the water environmental compartment. As alternatives, β-keto or fatty acid derivatives, e.g., aliphatic alcohols or ketones, showed more adequate properties. This study highlights the importance of complementing studies on nematicidal activity with a risk assessment-based analysis to allow for a faster selection of nematicidal phytochemical volatiles and to leverage the development and implementation of bionematicides. Full article

This research concentrated on the soil nematode communities inhabiting a reclaimed municipal waste landfill situated in Giedlarowa, southeastern Poland. The landfill, which was layered with natural soil in 2008 and cultivated with grass, served as the primary focus of the study. Samples for analysis were taken four times (October 2020 (Pf1), March 2021 (Pf2), October 2021 (Pf3), and March 2022 (Pf4)), with each time comprising three repetitions. The analysis was conducted employing microscopic examination, which enabled the identification of up to five trophic groups and species of plant-parasitic nematodes. During the assessment of nematode activity in the initial and subsequent growing seasons, it was found that Pratylenchus crenatus emerged as the predominant species among herbivorous nematodes in the plant-parasitic nematode (PPNs) community. Criconemoides informis, another nematode species, held a significant rank as well; their population during the third growing season formed the most substantial group among the PPN organisms dwelling in the soil. Nevertheless, interesting results were also obtained by populations of nematodes of the genus Hemicyclophora and Loofia, which were characterized by high densities. The analyzed soil environment showcased a C:N ratio spanning from 0.69 to 3.13. Furthermore, the soil samples exhibited variations in phosphorus content (P₂O₅), ranging from 4.02 mg/100 g to 10.09 mg/100 g. Criconemoides informis, Longidorus attenuates, Mesocriconema spp., and Bitylenchus maximus exhibited a positive correlation with soil mineral levels of calcium (Ca) and magnesium (Mg). Full article

Plant-parasitic nematodes (PPNs) are among the most serious phytopathogens and cause widespread and serious damage in major crops. In this study, using a genome mining method, we identified nonribosomal peptide synthetase (NRPS)-like enzymes in genomes of plant-parasitic nematodes, which are conserved with two consecutive reducing domains at the N-terminus (A-T-R₁-R₂) and homologous to fungal NRPS-like ATRR. We experimentally investigated the roles of the NRPS-like enzyme (MiATRR) in nematode (Meloidogyne incognita) parasitism. Heterologous expression of Miatrr in Saccharomyces cerevisiae can overcome the growth inhibition caused by high concentrations of glycine betaine. RT-qPCR detection shows that Miatrr is significantly upregulated at the early parasitic life stage (J2s in plants) of M. incognita. Host-derived Miatrr RNA interference (RNAi) in Arabidopsis thaliana can significantly decrease the number of galls and egg masses of M. incognita, as well as retard development and reduce the body size of the nematode. Although exogenous glycine betaine and choline have no obvious impact on the survival of free-living M. incognita J2s (pre-parasitic J2s), they impact the performance of the nematode in planta, especially in Miatrr-RNAi plants. Following application of exogenous glycine betaine and choline in the rhizosphere soil of A. thaliana, the numbers of galls and egg masses were obviously reduced by glycine betaine but increased by choline. Based on the knowledge about the function of fungal NRPS-like ATRR and the roles of glycine betaine in host plants and nematodes, we suggest that MiATRR is involved in nematode–plant interaction by acting as a glycine betaine reductase, converting glycine betaine to choline. This may be a universal strategy in plant-parasitic nematodes utilizing NRPS-like ATRR to promote their parasitism on host plants. Full article