Search Results (339)

Forensic entomotoxicology is a subdiscipline that utilizes necrophagous insects as bioindicators for detecting drugs and toxicants in decomposed remains, particularly in cases where conventional biological matrices are no longer available. Toxic substances can profoundly alter insect development, physiology, and community succession, potentially impacting the accuracy of postmortem interval (PMI) estimation. This review systematically summarizes the effects of various xenobiotics, including pesticides, illicit drugs, sedatives, heavy metals, and antibiotics on larval growth, physiological traits, and gut microbial composition in forensically relevant flies. However, most studies to date have relied primarily on phenotypic observations, with limited insight into underlying molecular mechanisms. Significant interspecies and dose-dependent variability also exists in the absorption, metabolism, and physiological responses to xenobiotics. We highlight recent advances in multi-omics technologies that facilitate the identification of molecular biomarkers associated with xenobiotic exposure, particularly within the insect detoxification system. Key components such as cytochrome P450 monooxygenases (P450s), glutathione S-transferases (GSTs), and ATP-binding cassette (ABC) transporters play essential roles in xenobiotic metabolism and insecticide resistance. Additionally, the insect fat body serves as a central hub for detoxification, hormonal regulation, and energy metabolism. It integrates signals related to xenobiotic exposure and modulates larval development, making it a promising model for future mechanistic studies in insect toxicology. Altogether, this review offers a comprehensive and reliable framework for understanding the complex interactions between toxic substance exposure, insect ecology, and decomposition in forensic investigations. Full article

The human exposome, including dietary exposures such as pesticides, additives, and environmental contaminants, plays a critical role in shaping the gut microbiota (GM) and long-term health outcomes. While the Mediterranean Diet is known for its health-promoting effects, the role of food quality, specifically organic vs. conventional products, in modulating GM within this dietary pattern remains underexplored. The aim of this study was to evaluate (1) whether an Italian Mediterranean Organic Diet (IMOD) confers additional benefits compared to an Italian Mediterranean non-Organic Diet (IMnOD), and (2) the impact of IMOD and IMnOD versus a free diet (No Diet) on GM and anthropometric parameters. A randomized, controlled trial was conducted on 39 healthy subjects. Eligible subjects were divided into the following groups: (1) 4 weeks No Diet, (2) 4 weeks IMOD, and (3) 4 weeks IMnOD. Microbiota profiling (16S rRNA sequencing), body composition (BIA), and dietary adherence (MEDAS, FFQ) were evaluated. Distinct microbial shifts following both IMOD and IMnOD compared to No Diet were revealed. Several taxa previously associated with short-chain fatty acid (SCFA) biosynthesis (i.e., Anaerobutyricum hallii, Anaerostipes hadrus, and Dorea longicatena) were increased after both Mediterranean Diet interventions, while Parabacteroides distasonis showed a specific increase in the IMOD group. No significant changes in body weight or composition were observed. These findings suggest that adherence to a Mediterranean Diet, regardless of food source, reshapes the gut microbiota, while organic food intake may influence specific microbial trajectories. Our results support the relevance of food quality in dietary interventions. Full article

In this review, we aim to provide a comprehensive overview of the roles of fungi in horticultural crops. Their beneficial roles and pathogenic effects are investigated. In addition, the recent advancements in fungal detection and management strategies (especially the use of spectral analysis) are summarized. Beneficial fungi, including plant growth-promoting fungi (PGPF), ectomycorrhizal fungi (ECM), and arbuscular mycorrhizal fungi (AMF), enhance nutrient uptake, promote root and shoot development, improve photosynthetic efficiency, and support plant resilience against biotic and abiotic stresses. Additionally, beneficial fungi contribute to flowering, seed germination, and disease management through biofertilizers, microbial pesticides, and mycoinsecticides. Conversely, pathogenic fungi cause significant diseases affecting roots, stems, leaves, flowers, and fruits, leading to crop yield losses. Advanced spectral analysis techniques, such as Fourier Transform Infrared Spectroscopy (FTIR), Near-Infrared Spectroscopy (NIR), Raman, and Visible and Near-Infrared Spectroscopy (Vis-NIR), alongside traditional methods like Polymerase Chain Reaction (PCR) and Enzyme-Linked Immunosorbent Assay (ELISA), have shown promise in detecting and managing fungal pathogens. Emerging applications of fungi in sustainable agriculture, including biofertilizers and eco-friendly pest management, are discussed, underscoring their potential to enhance crop productivity and mitigate environmental impacts. This review provides a comprehensive understanding of the complex roles of fungi in horticulture and explores innovative detection and management strategies. Full article

Nanomaterials (NMs) are currently widely used in a wide range of industrial production and scientific applications, starting from molecular and medical diagnostics to agriculture. In the agricultural and food systems, NMs are now used in various ways, to improve the nutritional value of crops, detect microbial activity and inhibit biofilms, encapsulate and deliver pesticides, protect plants from chemical spoilage, as nanosensors and more. Despite these applications, NMs are described as “dual-face technologies”: they can also act as environmental contaminants. For instance, nanoplastics (NPs) dispersed in the environment can damage plants at different levels and undermine their viability. Epigenetic modifications induced by NMs have potentially wider and longer-term impacts on gene expression and plant functions. Therefore, it is important to verify whether plants are also affected by NMs on the molecular level, including epigenetic mechanisms and any induced variation on the epigenome. This review focusses on gene expression modulation and epigenetic alterations such as DNA methylation and the role of microRNAs and long non-coding RNAs (lncRNAs) induced in plants and crops by NMs and NPs. Full article

Beneficial microorganisms are emerging as promising alternatives to conventional pesticides for the biological control of plant diseases. This study evaluated the efficacy of a consortium composed of Pseudomonas yamanorum and Trichoderma longibrachiatum and compost against three grapevine pathogens, Botrytis cinerea, Erysiphe necator, and Plasmopara viticola, in three cultivars: Victoria, Superior Seedless, and Early Sweet. The microbial consortium (P. yamanorum + T. longibrachiatum) combined with compost (treatment T4) significantly outperformed the individual treatments, reducing disease severity indices (DSIs) to 7.72, 5.35, and 3.37% in Victoria; 5.70, 6.95, and 3.32% in Superior Seedless; and 4.98, 2.35, and 2.84% in Early Sweet. The treatment also enhanced physiological traits, such as the chlorophyll content, and defense responses, including ascorbate peroxidase (APX), peroxidase (POX), and catalase (CAT) enzyme activities. Biochemical markers, including the total protein content, phenolic content, and reduced malondialdehyde (MDA) levels, indicated an improved oxidative stress tolerance. The soil analysis confirmed an increased pH, organic matter, nitrogen content, and microbial biomass. T4 further reduced the fruit disease incidence and improved quality attributes, including the sugar content and size, while lowering nitrate accumulation. These findings highlight the synergistic benefits of combining a microbial consortium with compost as a sustainable strategy to promote grapevine health, productivity, and soil resilience. Full article

Postharvest losses of Solanaceae crops, which include potatoes (Solanum tuberosum), tomatoes (Solanum lycopersicum), bell peppers (Capsicum annuum), and others, are one of the major challenges in agriculture throughout the world, impacting food security and economic viability. Agrochemicals have been successfully employed to prevent postharvest losses in agriculture. However, the excessive use of agrochemicals may cause detrimental effects on consumer health, the emergence of pesticide-resistant pathogens, increased restrictions on existing pesticides, environmental harm, and the decline of beneficial microorganisms, such as natural antagonists to pests and pathogens. Hence, there is a need to search for a safer and more environmentally friendly alternative. Microbial antagonists have gained more attention in recent years as substitutes for the management of pests and pathogens because they minimize the excessive applications of toxic substances while providing a sustainable approach to plant health management. However, more research is required to make microbial agents more stable and effective and less toxic before they can be used in commercial settings. Therefore, research is being conducted to develop new biological control agents and obtain knowledge of the mechanisms of action that underlie biological disease control. To accomplish this objective, the review aims to investigate microbial antagonists’ modes of action, potential future applications for biological control agents, and difficulties encountered during the commercialization process. We also highlight earlier publications on the function of microbial biological control agents against postharvest crop diseases. Therefore, we can emphasize that the prospects for biological control are promising and that the use of biological control agents to control crop diseases can benefit the environment. Full article

Baculoviruses represent a promising group of microbial insecticides for the biological control of agricultural pests, particularly those within the order Lepidoptera. Their high host specificity and environmental safety make them ideal candidates for inclusion in integrated pest management (IPM) programs. This review presents a comprehensive overview of baculovirus biology, highlighting their infection mechanisms, selectivity, and ecological compatibility. Special attention is given to advances in mass production systems—both in vivo and in vitro—and formulation technologies that improve field efficacy and environmental persistence, including UV protectants and microencapsulation. Regulatory aspects are also discussed, comparing international approval pathways and highlighting the disparity between regions with supportive policies (e.g., Latin America, Asia) and those with more restrictive frameworks (e.g., the European Union). Additionally, the current global market landscape for baculovirus-based products is examined, with emphasis on recent growth, commercialized formulations, and challenges such as host resistance and the limited spectrum of action. By synthesizing findings from the scientific literature and industry reports, this review underscores the role of baculoviruses as effective, sustainable alternatives or complements to chemical insecticides in modern agriculture, contributing to the reduction in pesticide residues and environmental impact. Full article

Fluorinated xenobiotics, such as per- and polyfluoroalkyl substances (PFAS), fluorinated pesticides, and pharmaceuticals, are extensively used across industries, but their extreme persistence, driven by the high carbon–fluorine (C–F) bond dissociation energy (~485 kJ/mol), poses serious environmental and health risks. These compounds have been detected in water, soil, and biota at concentrations from ng/L to µg/L, leading to widespread contamination and bioaccumulation. Traditional remediation approaches are often costly (e.g., EUR >100/m³ for advanced oxidation), energy-intensive, and rarely achieve complete degradation. In contrast, microbial defluorination offers a low-energy, sustainable alternative that functions under mild conditions. Microorganisms cleave C–F bonds through reductive, hydrolytic, and oxidative pathways, mediated by enzymatic and non-enzymatic mechanisms. Factors including electron donor availability and oxygen levels critically influence microbial defluorination efficiency. Microbial taxa, including bacteria, fungi, algae, and syntrophic consortia, exhibit varying defluorination capabilities. Metagenomic and microbial ecology studies continue to reveal novel defluorinating organisms and metabolic pathways. Key enzymes, such as fluoroacetate dehalogenases, cytochrome P450 monooxygenases, reductive dehalogenases, peroxidases, and laccases, have been characterised, with structural and mechanistic insights enhancing the understanding of their catalytic functions. Enzyme engineering and synthetic biology tools now enable the optimisation of these enzymes, and the design of microbial systems tailored for fluorinated compound degradation. Despite these advances, challenges remain in improving enzyme efficiency, broadening substrate specificity, and overcoming physiological constraints. This review emphasises the emerging promise of microbial defluorination as a transformative and green solution, uniquely integrating recent multidisciplinary findings to accelerate the development of sustainable microbial defluorination strategies for effective remediation of fluorinated xenobiotics. Full article

Trichoderma spp., Metarhizium spp., and Bacillus spp. are commonly used as biocontrol microorganisms domestically and internationally. However, microbial pesticides currently prepared from single living microorganisms have problems such as a short shelf life, particularly under stressful environment conditions. Secondary metabolites produced from biocontrol microorganisms are comparatively stable when used under field conditions. This study screened the optimal combination of biocontrol metabolites, referred to as TMB, composed of culture filtrates from certain isolates of Trichoderma asperellum 10264, Bacillus subtilis S4-4-10, and Metarhizium anisopliae 3.11962 (1:4:1 (v/v)). RNA-seq analysis and transmission electron microscope observations were carried out to identify the major functions of the most effective culture filtrates against Magnaporthe oryzae (the pathogen causing rice blast disease) and Chilo suppressalis (an insect pest in rice cultivation). TMB was found to disrupt the midgut subcellular structure of C. suppressalis larvae and inhibit the expression of genes related to immunity, membrane components, protein synthesis, and other functions in C. suppressalis larvae and M. oryzae, thereby interfering with their normal growth, reproduction, and infection potential in rice. In addition, TMB was also able to promote rice growth and trigger host defense responses against infections by the target pests and pathogens. In summary, TMB generated different inhibitory activities against multiple targets in C. suppressalis and M. oryzae and induced plant immunity in rice. Therefore, it can be used as a new environmentally friendly agent or alternative to control rice pests and diseases. Full article

With the sustainable increase in agricultural productivity, the need for safer, environmentally friendly pesticide alternatives is also growing. Metabolites of microorganisms (bacteria, fungi, actinomycetes) are emerging as potential bioactive compounds for integrated pest and disease management. These compounds comprise amino acids, carbohydrates, lipids, organic acids, phenolics, peptides, alkaloids, polyketides, and volatile organic compounds. The majority of them have insecticidal, fungicidal, and nematicidal activities. In this review, the classifications, biosynthetic pathways, and ecological functions of primary and secondary metabolites produced by microorganisms are discussed, including their mechanisms of action, ranging from competition to systemic acquired resistance in host plants. The article highlights the importance of microbial genera (viz., Bacillus sp., Pseudomonas sp., Trichoderma sp., Streptomyces sp., etc.) in making chemicals and biopesticides for crop defense. We present the possible applications of microbial biosynthesis strategies and synthetic biology tools in bioprocess development, covering recent innovations in formulation, delivery, and pathway engineering to enhance metabolite production. This review emphasizes the significance of microbial metabolites in improving the plant immunity, yield performance, reduction in pesticide application, and the sustainability of an ecological, sustainable, and resilient agricultural system. Full article

The natural and biological processes of organisms offer significant potential for the removal and remediation of environmental contaminants including organic pollutants such as persistent organic pollutants (POPs) like polychlorinated biphenyls (PCBs), pesticides, herbicides, industrial chemicals, and pharmaceuticals. Biotechnology provides various approaches to detoxify or remove these pollutants from ecosystems through the use of microorganisms and plants. This review explores the application of biotechnology for the remediation of organic pollutants in coastal marine ecosystems. A thorough analysis of the existing literature highlights bioremediation methods, such as biostimulation, bioaugmentation, and bioattenuation, and phytoremediation methods, like phytoextraction, phytostabilization, phytovolatilization, phytodegradaton, and phytofiltration. as the most widely used techniques in biotechnology. While bioremediation has advanced substantially in fields such as electrochemistry, genetic engineering, and nanotechnology, there is still limited research on the compatibility and application of these technologies in phytoremediation. This paper therefore aims to examine biotechnological methods for tackling organic pollutants in coastal marine environments with an emphasis on the need for further research on enhancing phytoremediation through microbial inoculation and nanomaterial-assisted uptake. Full article

American ginseng (AG) cultivation suffers from severe diseases, requiring heavy pesticide use. This study aimed to explore whether companion planting with maize (AG-maize) or Perilla frutescens (AG-perilla) could enhance AG growth and alter rhizosphere/root microbiomes in a root rot-infested field. Compared to monoculture (CK), companion planting significantly improved AG growth and survival rate at wither stage, with AG-maize showing the superior efficacy- increasing root length and fresh weight, and plant height by 39.04%, 46.10%, and 48.69%, respectively, while raising survival rate from 1.51% to 14.54%. Microbial analysis revealed that companion planting increased microbiome diversity and network complexity. At green fruit stage, AG-perilla increased rhizosphere fungal Chao1 index by 42.6%, while AG-maize and AG-perilla elevated endophytic fungal Shannon indices by 46.68% and 74.84%, respectively. At wither stage, AG-maize notably enriched beneficial microbes (e.g., soil Pseudomonas +108.49%, Bacillus +200.73%) while reducing pathogens (soil Fusarium −20.04%, root endophytic Alternaria −54.55%). Structural equation model indicated AG-maize improved AG survival via core species-driven antibiosis and nutrient regulation, with keystone species Lysobacter sp. RHLT3-4 and Verrucomicrobium sp. IMCC25902 significantly correlating with AG health. The AG-maize system fostered synergistic microbial networks, enriching beneficial taxa and suppressing pathogens. These findings provide a foundation for developing eco-friendly disease management and high-yield AG cultivation strategies. Full article

(1) Background: Exposure to pesticide residues through food remains a critical issue in public health, especially given their potential cumulative neurotoxic effects. (2) Methods: This study investigated the presence of pesticide residues in commonly consumed vegetables, fruits, and cereals based on official laboratory reports and evaluated the intestinal microbiome profiles of individuals whose diets consisted of over 50% plant-based foods. (3) Results: Analytical results from accredited laboratories in Romania demonstrated that all tested food samples were compliant with European regulations (Regulation (EC) 396/2005), with either undetectable or below-quantification-limit pesticide residues. However, organophosphates such as chlorpyrifos and diazinon were frequently tested, indicating persistent regulatory concern due to their known neurotoxic potential. A parallel analysis of stool samples revealed significant imbalances in neuroactive gut bacteria, including consistently low levels of Bifidobacterium and Lactobacillus species, and elevated levels of Oscillibacter and Alistipes, which are implicated in modulating GABA and serotonin pathways. Markers of proinflammatory activity, such as LPS-positive bacteria and histamine producers, were also elevated. (4) Conclusions: These findings suggest that even in diets rich in plant-based foods, microbial dysbiosis with neuroactive relevance can occur, potentially linked to environmental or dietary factors. The study underscores the need for a comprehensive evaluation of food safety and microbiome function as interconnected determinants of neurological health. Full article

The Mekong Delta, an important agricultural and economic hub in Vietnam, has suffered from severe water quality issues caused by both natural and anthropogenic forces. This paper aims to conduct a rational statistical approach to evaluate the current situation of surface water quality in the Mekong Delta, applying Factor Analysis (FA), Principal Component Analysis (PCA), and Agglomerative Hierarchical Clustering (AHC) to a database of 3117 samples collected by national and provincial monitoring stations. The results revealed significant contamination with organic pollutants (BOD5: 3.50–172.870 mg/L, COD: 6.493–472.984 mg/L), pesticides (e.g., DDTs: n.d to 1.227 mg/L), trace metals (As: 0.006–0.046 mg/L, Cr: n.d–1.960 mg/L), and microbial indicators (Coliforms: n.d–45,100 MPN/100 mL), often higher than the WHO drinking water threshold. PCA/AHC analysis identified the following five major pollution components: (1) organic pollution and sewage/industrial and deposited chemicals (PCA1—23.08% variance); (2) pesticide and agricultural runoff derived contamination with Hg (PCA2—15.44%); (3) microbial pollution of the water was found to correlate positively with Zn and Cu content (PCA3—8.90%); (4) salinity was found to mobilize As and Cr (PCA4—8.00%); (5) nutrient/microbial pollution presumably from agricultural and sewage inputs (PCA5—7.22%). AHC showed some spatial variability that grouped samples in urban/industrial (Cluster 1), rural/agricultural (Cluster 2), and a highly contaminated one, where water was toxic and presented with microbial and Cd contamination (Cluster 3). Levels of pesticides, Cr, and microbial pollution were higher than reported in previous Mekong Delta studies and exceeded regional trends. These results emphasize the importance of holistic water management strategies, including better wastewater treatment, pesticide control, sustainable farming, and climate-adaptive measures to reduce saltwater intrusion and safeguard drinking water quality for the Mekong Delta. Full article

The presence of pesticide residues in wine raises concerns about consumer health and regulatory compliance. This study evaluates the behaviour of seven pesticides (boscalid, penconazole, tebufenozide, kresoxim-methyl, trifloxystrobin, chlorpyrifos and lambda-cyhalothrin) during key stages of vinification, including clarification, fermentation, and racking, using liquid chromatography–tandem mass spectrometry. Penconazole, kresoxim-methyl and trifloxystrobin were not detected at the beginning of the vinification stage. Boscalid, chlorpyrifos and lambda-cyalothrin showed a reduction of 100% whit, a concentration below the limit of quantification at the end of the vinification stage. However, tebufenozide showed the lower elimination rate (88.1%), presenting a concentration at the end of the vinification process of 21.71 µg/kg. Experimental data confirm that pesticide concentrations progressively decline due to a combination of physicochemical transformations, adsorption onto solids, and biochemical processes. The clarification and racking stages are particularly important for reducing residues, primarily by removing suspended solids that adsorb pesticides. Fermentation also contributes to this reduction through microbial metabolism and enzymatic hydrolysis. The effectiveness of these stages depends on the pesticide’s solubility, chemical stability, and interactions with components in the wine matrix. Additionally, a risk assessment based on Acceptable Daily Intake and Estimated Daily Intake was performed to evaluate potential consumer exposure, showing lower risk for all pesticides studied. The findings emphasise the importance of optimising clarification and racking procedures, selecting effective fining agents, and refining filtration techniques to further enhance pesticide removal. Full article