Sign in to use this feature.

Years

Between: -

Subjects

remove_circle_outline
remove_circle_outline
remove_circle_outline
remove_circle_outline
remove_circle_outline

Journals

Article Types

Countries / Regions

Search Results (17)

Search Parameters:
Keywords = methyluracil

Order results
Result details
Results per page
Select all
Export citation of selected articles as:
21 pages, 2042 KiB  
Article
Ultrasound and Microwave-Assisted Synthesis and Antidiabetic and Hematopoietic Activity of Diphenhydramine Derivatives
by Anuar Dauletbakov, Yelizaveta Belyankova, Saniya Assylbekova, Darya Zolotareva, Sarah Bayazit, Layilya Baktybayeva, Ulan Kemelbekov, Valentina Yu, Nailya Ibragimova and Alexey Zazybin
Molecules 2025, 30(14), 2967; https://doi.org/10.3390/molecules30142967 - 15 Jul 2025
Viewed by 263
Abstract
This study presents the synthesis and antidiabetic and hematopoietic activity of ionic compounds based on 2-(diphenylmethoxy)-N,N-dimethylethanamine (diphenhydramine). Synthesis is carried out under ultrasonic (US) and microwave (MW) irradiation as well as using a conventional method (thermal activation). The synthesized [...] Read more.
This study presents the synthesis and antidiabetic and hematopoietic activity of ionic compounds based on 2-(diphenylmethoxy)-N,N-dimethylethanamine (diphenhydramine). Synthesis is carried out under ultrasonic (US) and microwave (MW) irradiation as well as using a conventional method (thermal activation). The synthesized ionic compounds have been tested for antidiabetic effect according to the inhibitory action against α-glucosidase and α-amylase (in vitro). All the synthesized derivatives of diphenhydramine showed higher inhibitory activity against α-glucosidase than commercially available diphenhydramine hydrochloride. Moreover, two of them, 1m (66.9%) and 1k (64.2%), had a greater inhibitory activity than the reference drug acarbose (51.8%). The hematopoietic activity was studied in albino laboratory female rats (in vivo). The compounds 1b, 1f, and 1k can restore immune blood cells (hematopoietic activity), equal to or exceeding that of the commercially available diphenhydramine hydrochloride and control (methyluracil). Full article
Show Figures

Figure 1

28 pages, 4663 KiB  
Article
Effect of Temperature on Adhesion Work of Model Organic Molecules on Modified Styrene–Divinylbenzene Copolymer Using Inverse Gas Chromatography
by Tayssir Hamieh and Vladimir Yu Gus’kov
Crystals 2025, 15(6), 490; https://doi.org/10.3390/cryst15060490 - 22 May 2025
Viewed by 344
Abstract
In previous studies, a new methodology was developed to determine the free dispersive and polar energies, the surface energies, and Lewis acid–base parameters of a polystyrene–divinylbenzene (S-DVB) copolymer modified by melamine, 5-Hydroxy-6-methyluracil, and 5-fluouracil. In this paper, we were interested in the determination [...] Read more.
In previous studies, a new methodology was developed to determine the free dispersive and polar energies, the surface energies, and Lewis acid–base parameters of a polystyrene–divinylbenzene (S-DVB) copolymer modified by melamine, 5-Hydroxy-6-methyluracil, and 5-fluouracil. In this paper, we were interested in the determination of the work of the adhesion of solvents on the modified copolymer as a function of temperature and for the different modifiers with the help of inverse gas chromatography at infinite dilution. The variations in the London dispersive and polar surface properties of copolymers against the temperature led to the determination of the different acid–base components of their surface energies. Using Fowkes’s equation, van Oss’s relation, and Owens’s concept, we obtained the variations in the dispersive and polar works of the adhesion of the different solid surfaces, and the corresponding forces of interaction between the organic solvents and the modified copolymer. It was shown that the work of adhesion is a function of two thermodynamic variables: the temperature and the modifier percentage. Full article
(This article belongs to the Section Organic Crystalline Materials)
Show Figures

Graphical abstract

19 pages, 4241 KiB  
Article
London Dispersive and Polar Surface Properties of Styrene–Divinylbenzene Copolymer Modified by 5-Hydroxy-6-Methyluracil Using Inverse Gas Chromatography
by Tayssir Hamieh and Vladimir Yu Gus’kov
Crystals 2025, 15(5), 438; https://doi.org/10.3390/cryst15050438 - 3 May 2025
Cited by 1 | Viewed by 1633
Abstract
The London dispersive and polar surface properties of solid materials are very important in many chemical processes, such as adsorption, coatings, catalysis, colloids, and mechanical engineering. One of the materials, a styrene–divinylbenzene copolymer modified with 5-hydroxy-6-methyluracil at different percentages, has not been deeply [...] Read more.
The London dispersive and polar surface properties of solid materials are very important in many chemical processes, such as adsorption, coatings, catalysis, colloids, and mechanical engineering. One of the materials, a styrene–divinylbenzene copolymer modified with 5-hydroxy-6-methyluracil at different percentages, has not been deeply characterized in the literature, and it isparticularly crucial to determine its London dispersive and polar properties. Recent research in the inverse gas chromatography (IGC) technique allowed a full determination of the surface properties of a styrene–divinylbenzene copolymer modified with 5-hydroxy-6-methyluracil by using well-known polar and non-polar organic solvents and varying the temperature. Applying the IGC technique at infinite dilution resulted in the retention volume of adsorbed molecules on styrene–divinylbenzene copolymer modified with 5-hydroxy-6-methyluracil at different percentages, using the Hamieh thermal model and our recent results on the separation of the two polar and dispersive contributions to the free energy of interaction. The surface properties of these materials, such as the surface free energy of adsorption, the polar acid and base surface energy, and the Lewis acid–base parameters, were obtained as a function of temperature and for different percentages of 5-hydroxy-6-methyluracil. The obtained results proved that the polar free energy of adsorption on styrene–divinylbenzene copolymer increased when the percentage of 5-hydroxy-6-methyluracil (HMU) increased. However, a decrease in the London dispersive surface energy of the copolymer was observed for higher percentages of 5-hydroxy-6-methyluracil. A Lewis amphoteric character was shown for the copolymer with the highest acidity, while the basicity linearly increased when the percentage of HMU increased. Full article
Show Figures

Figure 1

26 pages, 4909 KiB  
Article
Ionic and Non-Ionic Counterparts Based on Bis(Uracilyl)Alkane Moiety with Highest Selectivity Towards Acetylcholinesterase for Protection Against Organophosphate Poisoning and Treating Alzheimer’s Disease
by Irina V. Zueva, Liliya F. Saifina, Liliya M. Gubaidullina, Marina M. Shulaeva, Alexandra D. Kharlamova, Oksana A. Lenina, Grigory P. Belyaev, Albina Y. Ziganshina, Shan Gao, Wenjian Tang, Vyacheslav E. Semenov and Konstantin A. Petrov
Int. J. Mol. Sci. 2025, 26(8), 3759; https://doi.org/10.3390/ijms26083759 - 16 Apr 2025
Viewed by 535
Abstract
A series of bisuracils, in which uracil and 3,6-dimethyluracil moieties were bridged with a polymethylene spacer, and the uracil moiety contained a pentamethylene radical with ionic and non-ionic aminobenzyl groups, were synthesised. These bisuracils have been identified as cholinesterase inhibitors with exceptional selectivity [...] Read more.
A series of bisuracils, in which uracil and 3,6-dimethyluracil moieties were bridged with a polymethylene spacer, and the uracil moiety contained a pentamethylene radical with ionic and non-ionic aminobenzyl groups, were synthesised. These bisuracils have been identified as cholinesterase inhibitors with exceptional selectivity for acetylcholinesterase (AChE) over butyrylcholinesterase (BuChE). These bisuracils, which have been identified as highly effective AChE inhibitors, demonstrated activity at nano- and sub-nanomolar concentrations, with exceptional selectivity for AChE over BuChE. In kinetic studies of lead bisuracils 2b and 3c, both compounds exhibited mixed-type inhibition against AChE and BuChE. Additionally, molecular dynamic simulations demonstrated robust and stable interactions of 2b and 3c with the binding sites of their target. Bisuracil 2b showed significant potential for protection of AChE from irreversible inhibition by paraoxon; the most effective dose of 0.01 mg/kg was shown to reduce mortality in paraoxon-poisoned mice. Bisuracil 3c effectively inhibited brain AChE activity, reversing scopolamine-induced amnesia in mice at a dose of 5 mg/kg, which indicates its potential for cognitive enhancement. These findings position ionic bisuracils as promising prophylactics against organophosphate poisoning and non-ionic bisuracils as viable candidates for Alzheimer’s disease therapeutics. Full article
(This article belongs to the Section Molecular Pharmacology)
Show Figures

Graphical abstract

27 pages, 5507 KiB  
Article
The Wound-Healing Effect of a Novel Fibroblasts-Impregnated Hydroxyethylcellulose Gel in a Rat Full-Thickness Burn Model: A Preclinical Study
by Yury A. Novosad, Anton S. Shabunin, Natella I. Enukashvily, Olga V. Supilnikova, Anastasia I. Konkina, Natalia Yu. Semenova, Gleb S. Yatsemirsky, Evgenii V. Zinoviev, Kristina N. Rodionova, Kirill L. Kryshen, Antonina Yu. Borodina, Alexander Yu. Makarov, Andrey M. Fedyuk, Alexander D. Nilov, Elena V. Chikulaeva, Lidiya S. Konkova, Irina S. Chustrak, Veronika V. Traxova, Platon A. Safonov, Sergey V. Vissarionov, Egor M. Prikhodko and Yury V. Yurkevichadd Show full author list remove Hide full author list
Biomedicines 2024, 12(10), 2215; https://doi.org/10.3390/biomedicines12102215 - 28 Sep 2024
Cited by 3 | Viewed by 2321
Abstract
Background/Objectives: The objective of this study was to assess the efficacy of a cell-containing wound dressing based on fibroblasts in hydroxyethylcellulose (HEC) gel for the local treatment of deep partial-thickness and/or full-thickness skin burns in an animal model. Methods: The rats (male Wistar, [...] Read more.
Background/Objectives: The objective of this study was to assess the efficacy of a cell-containing wound dressing based on fibroblasts in hydroxyethylcellulose (HEC) gel for the local treatment of deep partial-thickness and/or full-thickness skin burns in an animal model. Methods: The rats (male Wistar, n = 100) were subjected to a full-thickness thermal burn (16 cm2). Radical necrectomy was performed one day after the burn. Three days later, the rats were randomly assigned to one of four groups: group 1 (no treatment), group 2 (chloramphenicol and methyluracil ointment, a routine clinical treatment), group 3 (a gel without cells, mock treatment), and group 4 (a dermal fibroblast-impregnated HEC gel). The treatment lasted for five days. The wound-healing process was evaluated by planimetric, cytologic, histologic, and immunohistochemical methods. Results: The differences in the rate of wound healing and the characteristics of wound cytology were identified. In the group 4, a regenerative type of cytogram was revealed, characterized by a significantly increased number of fibroblastic cells in comparison to samples from non-treated and mock-treated animals. Biopsy samples of burn wounds from animals in the group 4l demonstrated the presence of mature granulation tissue and a large number of microvessels. The repair process was stimulated, as evidenced by the increased thickness of newly formed granulation tissue and epidermis in the wound zone, elevated cellularity, and enhanced re-epithelialization activity. The number of Ki-67-positive proliferating cells was significantly higher in group 4 than in the control groups). A small number of non-proliferating donor fibroblasts was observed in the wound area 3 days after the end of treatment. Conclusions: The cell product is an effective agent for promoting wound healing during the regenerative phase. The experiments demonstrated that a gel populated by dermal fibroblasts can stimulate reparative regeneration processes in deep partial- and full-thickness burn wounds. Full article
(This article belongs to the Section Biomedical Engineering and Materials)
Show Figures

Figure 1

14 pages, 1693 KiB  
Article
Baseline Serum Biomarkers Predict Response to a Weight Loss Intervention in Older Adults with Obesity: A Pilot Study
by David H. Lynch, Blake R. Rushing, Wimal Pathmasiri, Susan McRitchie, Dakota J. Batchek, Curtis L. Petersen, Danae C. Gross, Susan C. J. Sumner and John A. Batsis
Metabolites 2023, 13(7), 853; https://doi.org/10.3390/metabo13070853 - 17 Jul 2023
Cited by 10 | Viewed by 2769
Abstract
Caloric restriction and aerobic and resistance exercise are safe and effective lifestyle interventions for achieving weight loss in the obese older population (>65 years) and may improve physical function and quality of life. However, individual responses are heterogeneous. Our goal was to explore [...] Read more.
Caloric restriction and aerobic and resistance exercise are safe and effective lifestyle interventions for achieving weight loss in the obese older population (>65 years) and may improve physical function and quality of life. However, individual responses are heterogeneous. Our goal was to explore the use of untargeted metabolomics to identify metabolic phenotypes associated with achieving weight loss after a multi-component weight loss intervention. Forty-two older adults with obesity (body mass index, BMI, ≥30 kg/m2) participated in a six-month telehealth-based weight loss intervention. Each received weekly dietitian visits and twice-weekly physical therapist-led group strength training classes with a prescription for aerobic exercise. We categorized responders’ weight loss using a 5% loss of initial body weight as a cutoff. Baseline serum samples were analyzed to determine the variable importance to the projection (VIP) of signals that differentiated the responder status of metabolic profiles. Pathway enrichment analysis was conducted in Metaboanalyst. Baseline data did not differ significantly. Weight loss was 7.2 ± 2.5 kg for the 22 responders, and 2.0 ± 2.0 kg for the 20 non-responders. Mummichog pathway enrichment analysis revealed that perturbations were most significant for caffeine and caffeine-related metabolism (p = 0.00028). Caffeine and related metabolites, which were all increased in responders, included 1,3,7-trimethylxanthine (VIP = 2.0, p = 0.033, fold change (FC) = 1.9), theophylline (VIP = 2.0, p = 0.024, FC = 1.8), paraxanthine (VIP = 2.0, p = 0.028, FC = 1.8), 1-methylxanthine (VIP = 1.9, p = 0.023, FC = 2.2), 5-acetylamino-6-amino-3-methyluracil (VIP = 2.2, p = 0.025, FC = 2.2), 1,3-dimethyl uric acid (VIP = 2.1, p = 0.023, FC = 2.3), and 1,7-dimethyl uric acid (VIP = 2.0, p = 0.035, FC = 2.2). Increased levels of phytochemicals and microbiome-related metabolites were also found in responders compared to non-responders. In this pilot weight loss intervention, older adults with obesity and evidence of significant enrichment for caffeine metabolism were more likely to achieve ≥5% weight loss. Further studies are needed to examine these associations in prospective cohorts and larger randomized trials. Full article
(This article belongs to the Special Issue Treatment of Obesity and Its Metabolic Complications)
Show Figures

Figure 1

13 pages, 1391 KiB  
Article
Stimulation of B-Lymphopoiesis by Administration of a Trimecaine-Based Ionic Compound in Cyclophosphamide-Induced Hematopoietic-Depressive Model
by Layilya Baktybayeva, Guldana Daulet, Alexey Zazybin, Valentina Yu, Yekaterina Ostapchuk, Yuliya Perfilyeva, Aikyn Kali, Nurshat Abdolla, Aigul Malmakova, Nuraly Baktybai, Zhanerke Temirbekova and Khadichahan Rafikova
Molecules 2023, 28(3), 1378; https://doi.org/10.3390/molecules28031378 - 1 Feb 2023
Cited by 1 | Viewed by 2361
Abstract
According to the WHO, the secondary form of hematopoietic-depressive status increases the risk of death in people with oncological, infectious, and hormonal diseases. The choice of drugs that stimulate the hematopoietic activity of B-lymphopoiesis is limited. The current leucopoiesis drugs have a number [...] Read more.
According to the WHO, the secondary form of hematopoietic-depressive status increases the risk of death in people with oncological, infectious, and hormonal diseases. The choice of drugs that stimulate the hematopoietic activity of B-lymphopoiesis is limited. The current leucopoiesis drugs have a number of side effects: thymic preparations stimulate the production of PGE2, which causes chronic inflammation and various autoimmune diseases through the differentiation of T helper 1 (Th1) cells, the proliferation of Th17 cells, and the production of IL-22 from Th22 cells through EP2 and EP4 receptors; cytokine preparations can cause uncontrolled immune reactions and impaired contractility of smooth and cardiac muscles; drugs based on nucleic acids can stimulate the division of all cells, including bacterial and cancerous ones. The use of oligonucleotides such as ribozymes and antisense oligodeoxynucleotides (AS-ODNs) shows promise as therapeutic moieties, but faces a number of challenges such as nuclease sensitivity, off-target effects, and efficient delivery. The search for substances that stimulate B-lymphopoiesis among ionic compounds was motivated by the discovery of the unique properties of lidocaine docusate, one of the first ionic liquid forms of the known drugs. The lidocaine docusate (protonated form of lidocaine (2-(diethylamino)-N-(2,6-dimethylphenyl) acetamide + docusate-anion (dioctylsulfosuccinate))) suppresses the division of pheochromocytoma cells and activates immunity in rats. The trimecaine-based ionic compound (TIC) demonstrates high B-lymphopoiesis-stimulating activity. The TIC compound stimulates an increase in the volume of transitional B cells, which play an important role for further differentiation and formation of a sufficient number of mature B1 cells and mature B2 cells, where mature B2 cells make up the bulk of the functional population of B lymphocytes. The TIC compound most strongly stimulated the restoration of the number of marginal zone B cells, follicular B cells, and activated germinal center B cells after the cytotoxic emptying of the follicular centers of the spleen induced cyclophosphamide. It significantly exceeds the activity of the comparison drug methyluracil. The TIC compound does not affect the level of pro-B, pre-B-I, or pre-B-II bone marrow cells, which prevents the risk of the formation of immature functionally defective cells. Full article
(This article belongs to the Section Medicinal Chemistry)
Show Figures

Figure 1

5 pages, 481 KiB  
Communication
Synthesis of 6-Methyluracilpentylviologen Resorcinarene Cavitand
by Albina Y. Ziganshina, Elina E. Mansurova, Marina M. Shulaeva, Viktor V. Syakaev, Vyacheslav E. Semenov and Igor S. Antipin
Molbank 2022, 2022(4), M1507; https://doi.org/10.3390/M1507 - 25 Nov 2022
Cited by 3 | Viewed by 1721
Abstract
Resorcinarenes, as macrocyclic compounds, are widely used to recognize substrates and create supramolecular assemblies. Their bowl-like form organizes functional groups at the upper and lower rims, which has a substantial impact on the molecular recognition of various substrates. As a result, resorcinarenes make [...] Read more.
Resorcinarenes, as macrocyclic compounds, are widely used to recognize substrates and create supramolecular assemblies. Their bowl-like form organizes functional groups at the upper and lower rims, which has a substantial impact on the molecular recognition of various substrates. As a result, resorcinarenes make good drug nanocarrier candidates. This paper presents the synthesis of a new resorcinarene cavitand functionalized along the upper rim with methyluracil and viologen fragments for its potential use in drug delivery. Methyluracils and viologens are well-known receptor-targeted compounds capable of facilitating the vector transfer of drugs and increasing the effectiveness of their action on cells. The paper describes the synthesis of resorcinarene modified with methyluracil and viologen groups along with its structure determined by 1H-, 13C-NMR and IR spectroscopy. Full article
Show Figures

Scheme 1

21 pages, 5313 KiB  
Article
Novel Uracil-Based Inhibitors of Acetylcholinesterase with Potency for Treating Memory Impairment in an Animal Model of Alzheimer’s Disease
by Vyacheslav E. Semenov, Irina V. Zueva, Sofya V. Lushchekina, Eduard G. Suleimanov, Liliya M. Gubaidullina, Marina M. Shulaeva, Oksana A. Lenina and Konstantin A. Petrov
Molecules 2022, 27(22), 7855; https://doi.org/10.3390/molecules27227855 - 14 Nov 2022
Cited by 6 | Viewed by 2141
Abstract
Novel derivatives based on 6-methyluracil and condensed uracil, 2,4-quinazoline-2,4-dione, were synthesized with terminal meta- and para-benzoate moieties in polymethylene chains at the N atoms of the pyrimidine ring. In the synthesized compounds, the polymethylene chains were varied from having tris- to [...] Read more.
Novel derivatives based on 6-methyluracil and condensed uracil, 2,4-quinazoline-2,4-dione, were synthesized with terminal meta- and para-benzoate moieties in polymethylene chains at the N atoms of the pyrimidine ring. In the synthesized compounds, the polymethylene chains were varied from having tris- to hexamethylene chains and quaternary ammonium groups; varying substituents (ester, salt, acid) at benzene ring were introduced into the chains and benzoate moieties. In vivo biological experiments demonstrated the potency of these compounds in decreasing the number of β-amyloid plaques and their suitability for the treatment of memory impairment in a transgenic model of Alzheimer’s disease. Full article
(This article belongs to the Special Issue Recent Advances in the Modulation of Cholinergic Signaling II)
Show Figures

Graphical abstract

19 pages, 8015 KiB  
Article
Synthesis and Antiviral Evaluation of Nucleoside Analogues Bearing One Pyrimidine Moiety and Two D-Ribofuranosyl Residues
by Olga V. Andreeva, Bulat F. Garifullin, Vladimir V. Zarubaev, Alexander V. Slita, Iana L. Yesaulkova, Alexandrina S. Volobueva, Mayya G. Belenok, Maria A. Man’kova, Liliya F. Saifina, Marina M. Shulaeva, Alexandra D. Voloshina, Anna P. Lyubina, Vyacheslav E. Semenov and Vladimir E. Kataev
Molecules 2021, 26(12), 3678; https://doi.org/10.3390/molecules26123678 - 16 Jun 2021
Cited by 11 | Viewed by 2977
Abstract
A series of 1,2,3-triazolyl nucleoside analogues in which 1,2,3-triazol-4-yl-β-d-ribofuranosyl fragments are attached via polymethylene linkers to both nitrogen atoms of the heterocycle moiety (uracil, 6-methyluracil, thymine, quinazoline-2,4-dione, alloxazine) or to the C-5 and N-3 atoms of the 6-methyluracil moiety was [...] Read more.
A series of 1,2,3-triazolyl nucleoside analogues in which 1,2,3-triazol-4-yl-β-d-ribofuranosyl fragments are attached via polymethylene linkers to both nitrogen atoms of the heterocycle moiety (uracil, 6-methyluracil, thymine, quinazoline-2,4-dione, alloxazine) or to the C-5 and N-3 atoms of the 6-methyluracil moiety was synthesized. All compounds synthesized were evaluated for antiviral activity against influenza virus A/PR/8/34/(H1N1) and coxsackievirus B3. Antiviral assays revealed three compounds, 2i, 5i, 11c, which showed moderate activity against influenza virus A H1N1 with IC50 values of 57.5 µM, 24.3 µM, and 29.2 µM, respectively. In the first two nucleoside analogues, 1,2,3-triazol-4-yl-β-d-ribofuranosyl fragments are attached via butylene linkers to N-1 and N-3 atoms of the heterocycle moiety (6-methyluracil and alloxazine, respectively). In nucleoside analogue 11c, two 1,2,3-triazol-4-yl-2′,3′,5′-tri-O-acetyl-β-d-ribofuranose fragments are attached via propylene linkers to the C-5 and N-3 atoms of the 6-methyluracil moiety. Almost all synthesized 1,2,3-triazolyl nucleoside analogues showed no antiviral activity against the coxsackie B3 virus. Two exceptions are 1,2,3-triazolyl nucleoside analogs 2f and 5f, in which 1,2,3-triazol-4-yl-2′,3′,5′-tri-O-acetyl-β-d-ribofuranose fragments are attached to the C-5 and N-3 atoms of the heterocycle moiety (6-methyluracil and alloxazine respectively). These compounds exhibited high antiviral potency against the coxsackie B3 virus with IC50 values of 12.4 and 11.3 µM, respectively, although both were inactive against influenza virus A H1N1. According to theoretical calculations, the antiviral activity of the 1,2,3-triazolyl nucleoside analogues 2i, 5i, and 11c against the H1N1 (A/PR/8/34) influenza virus can be explained by their influence on the functioning of the polymerase acidic protein (PA) of RNA-dependent RNA polymerase (RdRp). As to the antiviral activity of nucleoside analogs 2f and 5f against coxsackievirus B3, it can be explained by their interaction with the coat proteins VP1 and VP2. Full article
(This article belongs to the Special Issue Bioactive Molecules in Medicinal Chemistry)
Show Figures

Graphical abstract

19 pages, 4749 KiB  
Article
Anharmonic Thermal Motion Modelling in the Experimental XRD Charge Density Determination of 1-Methyluracil at T = 23 K
by Riccardo Destro, Pietro Roversi, Mario Barzaghi and Leonardo Lo Presti
Molecules 2021, 26(11), 3075; https://doi.org/10.3390/molecules26113075 - 21 May 2021
Cited by 9 | Viewed by 3271
Abstract
The experimental electron density distribution (EDD) of 1-methyluracil (1-MUR) was obtained by single crystal X-ray diffraction (XRD) experiments at 23 K. Four different structural models fitting an extensive set of XRD data to a resolution of (sinθ/λ)max = 1.143 Å−1 are [...] Read more.
The experimental electron density distribution (EDD) of 1-methyluracil (1-MUR) was obtained by single crystal X-ray diffraction (XRD) experiments at 23 K. Four different structural models fitting an extensive set of XRD data to a resolution of (sinθ/λ)max = 1.143 Å−1 are compared. Two of the models include anharmonic temperature factors, whose inclusion is supported by the Hamilton test at a 99.95% level of confidence. Positive Fourier residuals up to 0.5 eÅ–3 in magnitude were found close to the methyl group and in the region of hydrogen bonds. Residual density analysis (RDA) and molecular dynamics simulations in the solid-state demonstrate that these residuals can be likely attributed to unresolved disorder, possibly dynamical and long–range in nature. Atomic volumes and charges, molecular moments up to hexadecapoles, as well as maps of the molecular electrostatic potential were obtained from distributed multipole analysis of the EDD. The derived electrostatic properties neither depend on the details of the multipole model, nor are significantly affected by the explicit inclusion of anharmonicity in the least–squares model. The distribution of atomic charges in 1-MUR is not affected by the crystal environment in a significant way. The quality of experimental findings is discussed in light of in-crystal and gas-phase quantum simulations. Full article
Show Figures

Graphical abstract

15 pages, 1300 KiB  
Article
Tobacco Smoke and CYP1A2 Activity in a US Population with Normal Liver Enzyme Levels
by Alexis Garduno and Tianying Wu
Int. J. Environ. Res. Public Health 2021, 18(5), 2225; https://doi.org/10.3390/ijerph18052225 - 24 Feb 2021
Cited by 10 | Viewed by 4324
Abstract
Non-alcoholic fatty liver disease (NAFLD) is common among 30% of American adults. Former and current smokers are at higher risk for NAFLD compared to never smokers. The ratio of urine caffeine metabolites to caffeine intake—namely, urine caffeine metabolite indices—has previously been used as [...] Read more.
Non-alcoholic fatty liver disease (NAFLD) is common among 30% of American adults. Former and current smokers are at higher risk for NAFLD compared to never smokers. The ratio of urine caffeine metabolites to caffeine intake—namely, urine caffeine metabolite indices—has previously been used as a proxy for CYP1A2 activity, which is one of the main liver metabolizing enzymes. CYP1A2 activity is associated with NAFLD progression. No studies to our knowledge have examined the associations of liver enzymes, smoking intensity, and secondhand smoke (SES) with CYP1A2 activity (using caffeine metabolite indices) across smoking status. We analyzed national representative samples from the 2009–2010 National Health and Nutrition Examination Survey (NHANES). Interestingly, even within a normal range, several liver enzymes were associated with caffeine metabolite indices, and patterns of many of these associations varied by smoking status. For instance, within a normal range, aspartate aminotransferase (AST) in never smokers and bilirubin in current smokers were inversely associated with 1-methyluric acid and 5-acetylamino-6-amino-3-methyluracil (URXAMU). Furthermore, we observed a common pattern: across all smoking statuses, higher AST/alanine aminotransferase (AST/ALT) was associated with 1-methyluric acid and URXAMU. Moreover, in current smokers, increased lifelong smoking intensity was associated with reduced caffeine metabolite indices, but acute cigarette exposure as measured by SES levels was associated with increased caffeine metabolite indices among never smokers. In summary, commonly used liver enzyme tests can reflect the CYP1A2 activity even within a normal range, but the selection of these enzymes depends on the smoking status; the associations between smoking and the CYP1A2 activity not only depend on the intensity but also the duration of tobacco exposure. Full article
(This article belongs to the Section Toxicology and Public Health)
Show Figures

Figure 1

19 pages, 3170 KiB  
Article
Novel Acetylcholinesterase Inhibitors Based on Uracil Moiety for Possible Treatment of Alzheimer Disease
by Vyacheslav E. Semenov, Irina V. Zueva, Marat A. Mukhamedyarov, Sofya V. Lushchekina, Elena O. Petukhova, Lilya M. Gubaidullina, Evgeniya S. Krylova, Lilya F. Saifina, Oksana A. Lenina and Konstantin A. Petrov
Molecules 2020, 25(18), 4191; https://doi.org/10.3390/molecules25184191 - 12 Sep 2020
Cited by 18 | Viewed by 3917
Abstract
In this study, novel derivatives based on 6-methyluracil and condensed uracil were synthesized, namely, 2,4-quinazoline-2,4-dione with ω-(ortho-nitrilebenzylethylamino) alkyl chains at the N atoms of the pyrimidine ring. In this series of synthesized compounds, the polymethylene chains were varied from having tetra- [...] Read more.
In this study, novel derivatives based on 6-methyluracil and condensed uracil were synthesized, namely, 2,4-quinazoline-2,4-dione with ω-(ortho-nitrilebenzylethylamino) alkyl chains at the N atoms of the pyrimidine ring. In this series of synthesized compounds, the polymethylene chains were varied from having tetra- to hexamethylene chains, and secondary NH, tertiary ethylamino, and quaternary ammonium groups were introduced into the chains. The molecular modeling of the compounds indicated that they could function as dual binding site acetylcholinesterase inhibitors, binding to both the peripheral anionic site and active site. The data from in vitro experiments show that the most active compounds exhibit affinity toward acetylcholinesterase within a nanomolar range, with selectivity for acetylcholinesterase over butyrylcholinesterase reaching four orders of magnitude. In vivo biological assays demonstrated the potency of these compounds in the treatment of memory impairment using an animal model of Alzheimer disease. Full article
(This article belongs to the Special Issue Development of Novel Drugs for Alzheimer´s Disease)
Show Figures

Graphical abstract

17 pages, 3144 KiB  
Article
Oxidative Repair of Pyrimidine Cyclobutane Dimers by Nitrate Radicals (NO3): A Kinetic and Computational Study
by Tomas Haddad, Joses G. Nathanael, Jonathan M. White and Uta Wille
Chemistry 2020, 2(2), 453-469; https://doi.org/10.3390/chemistry2020027 - 9 May 2020
Viewed by 3381
Abstract
Pyrimidine cyclobutane dimers are hazardous DNA lesions formed upon exposure of DNA to UV light, which can be repaired through oxidative electron transfer (ET). Laser flash photolysis and computational studies were performed to explore the role of configuration and constitution at the cyclobutane [...] Read more.
Pyrimidine cyclobutane dimers are hazardous DNA lesions formed upon exposure of DNA to UV light, which can be repaired through oxidative electron transfer (ET). Laser flash photolysis and computational studies were performed to explore the role of configuration and constitution at the cyclobutane ring on the oxidative repair process, using the nitrate radical (NO3) as oxidant. The rate coefficients of 8–280 × 107 M−1 s−1 in acetonitrile revealed a very high reactivity of the cyclobutane dimers of N,N’-dimethylated uracil (DMU), thymine (DMT), and 6-methyluracil (DMU6-Me) towards NO3, which likely proceeds via ET at N(1) as a major pathway. The overall rate of NO3 consumption was determined by (i) the redox potential, which was lower for the syn- than for the anti-configured dimers, and (ii) the accessibility of the reaction site for NO3. In the trans dimers, both N(1) atoms could be approached from above and below the molecular plane, whereas in the cis dimers, only the convex side was readily accessible for NO3. The higher reactivity of the DMT dimers compared with isomeric DMU dimers was due to the electron-donating methyl groups on the cyclobutane ring, which increased their susceptibility to oxidation. On the other hand, the approach of NO3 to the dimers of DMU6-Me was hindered by the methyl substituents adjacent to N(1), making these dimers the least reactive in this series. Full article
Show Figures

Graphical abstract

19 pages, 4530 KiB  
Article
Reductive Evolution and Diversification of C5-Uracil Methylation in the Nucleic Acids of Mollicutes
by Pascal Sirand-Pugnet, Damien Brégeon, Laure Béven, Catherine Goyenvalle, Alain Blanchard, Simon Rose, Henri Grosjean, Stephen Douthwaite, Djemel Hamdane and Valérie de Crécy-Lagard
Biomolecules 2020, 10(4), 587; https://doi.org/10.3390/biom10040587 - 10 Apr 2020
Cited by 7 | Viewed by 4661
Abstract
The C5-methylation of uracil to form 5-methyluracil (m5U) is a ubiquitous base modification of nucleic acids. Four enzyme families have converged to catalyze this methylation using different chemical solutions. Here, we investigate the evolution of 5-methyluracil synthase families in Mollicutes, [...] Read more.
The C5-methylation of uracil to form 5-methyluracil (m5U) is a ubiquitous base modification of nucleic acids. Four enzyme families have converged to catalyze this methylation using different chemical solutions. Here, we investigate the evolution of 5-methyluracil synthase families in Mollicutes, a class of bacteria that has undergone extensive genome erosion. Many mollicutes have lost some of the m5U methyltransferases present in their common ancestor. Cases of duplication and subsequent shift of function are also described. For example, most members of the Spiroplasma subgroup use the ancestral tetrahydrofolate-dependent TrmFO enzyme to catalyze the formation of m5U54 in tRNA, while a TrmFO paralog (termed RlmFO) is responsible for m5U1939 formation in 23S rRNA. RlmFO has replaced the S-adenosyl-L-methionine (SAM)-enzyme RlmD that adds the same modification in the ancestor and which is still present in mollicutes from the Hominis subgroup. Another paralog of this family, the TrmFO-like protein, has a yet unidentified function that differs from the TrmFO and RlmFO homologs. Despite having evolved towards minimal genomes, the mollicutes possess a repertoire of m5U-modifying enzymes that is highly dynamic and has undergone horizontal transfer. Full article
(This article belongs to the Collection RNA Modifications)
Show Figures

Figure 1

Back to TopTop