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Keywords = long-term seed storage

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24 pages, 1817 KB  
Review
Hydrogel Systems in Plant Germplasm Cryopreservation: A Comprehensive Review
by Olena Bobrova, Viktor Husak, Alois Bilavcik and Milos Faltus
Gels 2026, 12(2), 106; https://doi.org/10.3390/gels12020106 - 27 Jan 2026
Abstract
Cryopreservation is a critical strategy for the long-term conservation of plant germplasm, particularly for clonally propagated crops, endangered species, and plants producing recalcitrant seeds. Hydrogel-based encapsulation systems can improve survival during ultra-low-temperature storage by providing mechanical protection, moderating dehydration, and regulating cryoprotectant uptake. [...] Read more.
Cryopreservation is a critical strategy for the long-term conservation of plant germplasm, particularly for clonally propagated crops, endangered species, and plants producing recalcitrant seeds. Hydrogel-based encapsulation systems can improve survival during ultra-low-temperature storage by providing mechanical protection, moderating dehydration, and regulating cryoprotectant uptake. Although calcium–alginate beads remain the traditional matrix for encapsulation–dehydration and encapsulation–vitrification, recent advances in biomaterials science have enabled the development of composite polysaccharide blends, protein-based matrices, synthetic polymer networks, macroporous cryogels, and functionalized hybrid hydrogels incorporating surfactants, antioxidants, or nanomaterials. These engineered systems provide improved control over water state, pore architecture, diffusion kinetics, and thermal behavior, thereby reducing cryoinjury and enhancing post-thaw recovery across diverse plant explants. This review synthesizes current knowledge on hydrogel platforms used in plant cryopreservation, with emphasis on how physicochemical properties influence dehydration dynamics, cryoprotectant transport, vitrification stability, and rewarming responses. Performance across major explant types is assessed, key limitations in existing materials and protocols are identified, and design principles for next-generation hydrogel systems are outlined. Future progress will depend on material standardization, integration with automated cryopreservation workflows, and the development of responsive hydrogel matrices capable of mitigating cryogenic stresses. Full article
(This article belongs to the Special Issue Recent Advances in Multi-Functional Hydrogels)
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22 pages, 937 KB  
Article
Interannual Variation in Seed Traits of Cedrela Species: Implications for Conservation in the Context of Climate Change
by Guadalupe Galíndez, Ana Álvarez, Diana Ceccato, Victoria Rivero, Gisela Malagrina, Tania Bertuzzi, Pablo Saravia, Stavros Nicolás Sola, Carol C. Baskin and Luis Fornes
Plants 2026, 15(3), 380; https://doi.org/10.3390/plants15030380 - 26 Jan 2026
Abstract
Climate change is altering temperature and precipitation regimes in Argentina, with potential consequences for regeneration and persistence of forest tree species, emphasizing the importance of ex situ seed conservation. We evaluated interannual variation in seed traits, desiccation tolerance, storage behavior, and longevity of [...] Read more.
Climate change is altering temperature and precipitation regimes in Argentina, with potential consequences for regeneration and persistence of forest tree species, emphasizing the importance of ex situ seed conservation. We evaluated interannual variation in seed traits, desiccation tolerance, storage behavior, and longevity of Cedrela balansae C. DC. and C. fissilis Vell. (Meliaceae), two endangered native species of subtropical rainforests in Argentina. Both species produced desiccation-tolerant seeds, independently of collection year, seed traits, or climatic conditions. Depending on the species, seed traits and longevity varied across years and showed strong relationships with temperature and precipitation, particularly during seed development. Cedrela balansae seeds are medium-lived seeds and have high longevity under standard seed banking conditions, suggesting strong potential for long-term ex situ conservation. Cedrela fissilis seeds are short-lived seeds and have high sensitivity to the storage environment. Correlations among climatic variables and seed traits and longevity parameters suggest that future warming and drying environments may shorten the window for germination and seedling establishment, with species-specific responses depending on climatic conditions during seed development. These results highlight the importance of climate effects in determining seed traits and seed longevity and emphasize the role of seed banking as a critical conservation strategy under climate change. Full article
(This article belongs to the Special Issue Seed Dormancy and Germination for Plant Adaptation to Climate Change)
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33 pages, 3157 KB  
Article
The Effect of Potato Seed Treatment on the Chemical Composition of Tubers and the Processing Quality of Chips Assessed Immediately After Harvest and After Long-Term Storage of Tubers
by Katarzyna Brążkiewicz, Elżbieta Wszelaczyńska, Bożena Bogucka and Jarosław Pobereżny
Agriculture 2026, 16(2), 199; https://doi.org/10.3390/agriculture16020199 - 13 Jan 2026
Viewed by 238
Abstract
Potatoes intended for chip production must meet strict quality requirements. The objective of the study was to determine the optimal cultivation approach most favorable for chip potato cultivars (Beo, Picus, Pirol) through the application of various agronomic treatments, including a biostimulant and a [...] Read more.
Potatoes intended for chip production must meet strict quality requirements. The objective of the study was to determine the optimal cultivation approach most favorable for chip potato cultivars (Beo, Picus, Pirol) through the application of various agronomic treatments, including a biostimulant and a fungicide. In the fresh tuber mass, the following components were determined: dry matter, starch, total and reducing sugars, as well as carotenoid and chlorophyll pigments. The chips were evaluated in terms of organoleptic traits: color, taste, aroma and consistency. All analyses were carried out directly after harvest and after 6 months of storage under constant temperature (8 °C) and relative air humidity (95%). In general, all experimental factors had a significant effect on the parameters studied. The potato cultivars differed significantly in the chemical composition of their tubers. The cultivar ‘Beo’ was characterized by the highest dry matter and starch content and, at the same time, the lowest content of total and reducing sugars (respectively, : 23.9%, 18.4%, 5.77 g kg−1 f.m., 459 mg kg−1 f.m.). The cultivar ‘Pirol’, on the other hand, contained the highest amounts of carotenoid and chlorophyll pigments (a, b and total): 10.31, 1.87, 0.927, 2.80 mg kg−1 f.m., respectively. The preparations Moncut 460 SC (MC) and Supporter® (SP) used in potato production showed a positive effect on the chemical composition of the cultivars studied. It was demonstrated that the combined use of both agents proved to be the most beneficial in this regard. The chips produced were characterized by high overall quality, averaging 4.6 points after harvest and 4.5 points after storage, fully meeting the standards required for this type of product. Chips fried from the tubers of the ‘Beo’ cultivar received the highest organoleptic scores: color—4.9, consistency—4.6, and taste—4.6 points. Regardless of the experimental factors, the chips were characterized by a very good aroma (5.0 points). The studies conducted generally demonstrated a positive effect of the potato seed treatments used in cultivation on the individual quality traits of the chips. The combined application of the preparations (MC and SP) generally had a significantly positive effect on the organoleptic characteristics of the chips. After long-term storage, the quality of tubers and chips slightly decreased overall, which indicates that appropriate conditions were maintained throughout the storage period and that proper handling of the tubers immediately after harvest was ensured. Full article
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31 pages, 5337 KB  
Article
Energy Management in Multi-Source Electric Vehicles Through Multi-Objective Whale Particle Swarm Optimization Considering Aging Effects
by Nikolaos Fesakis, Christos Megagiannis, Georgia Eirini Lazaridou, Efstratia Sarafoglou, Aristotelis Tzouvaras and Athanasios Karlis
Energies 2026, 19(1), 154; https://doi.org/10.3390/en19010154 - 27 Dec 2025
Viewed by 314
Abstract
As the adoption of electric vehicles increases, hybrid energy storage systems (HESS) combining batteries and supercapacitors mitigate the conflict between high energy capacity and power demand, particularly during acceleration and transient loads. However, frequent current fluctuations accelerate battery degradation, reducing long-term performance. This [...] Read more.
As the adoption of electric vehicles increases, hybrid energy storage systems (HESS) combining batteries and supercapacitors mitigate the conflict between high energy capacity and power demand, particularly during acceleration and transient loads. However, frequent current fluctuations accelerate battery degradation, reducing long-term performance. This study presents a multi-objective Whale–Particle Swarm Optimization Algorithm (MOWPSO) for tuning the control parameters of a HESS composed of a lithium-ion battery and a supercapacitor. The proposed full-active configuration with dual bidirectional DC converters enables precise current sharing and independent regulation of energy and power flow. The optimization framework minimizes four objectives: mean battery current amplitude, cumulative aging index, final state-of-charge deviation, and an auxiliary penalty term promoting consistent battery–supercapacitor cooperation. The algorithm operates offline to identify Pareto-optimal controller settings under the Federal Test Procedure 75 cycle, while the selected compromise solution governs real-time current distribution. Robustness is assessed through multi-seed hypervolume analysis, and results demonstrate over 20% reduction in battery aging and approximately 25% increase in effective cycle life compared to battery-only, rule-based and metaheuristic algorithm strategies control. Cross-cycle validation under highway and worldwide driving profiles confirms the controller’s adaptability and stable current-sharing performance without re-tuning. Full article
(This article belongs to the Special Issue Energy Management and Control System of Electric Vehicles)
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19 pages, 5752 KB  
Article
Physiology of Germination and Postharvest Deterioration in Chickpea (Cicer arietinum L., Fabaceae) Seeds Treated with Non-Thermal Plasma
by Ada S. Vélez, Brenda L. Fina, Juan A. Arguello, Matías G. Ferreyra, Brenda Santamaría, Pablo S. Vélez, Carla G. Zilli, Leandro Prevosto and Karina B. Balestrasse
Seeds 2025, 4(4), 69; https://doi.org/10.3390/seeds4040069 - 17 Dec 2025
Viewed by 374
Abstract
Chickpea seed quality is highly susceptible to mechanical damage during handling and to rapid deterioration under postharvest storage. Atmospheric pressure Non-Thermal Plasma (NTP) has shown positive effects on seed quality in several species, but its long-term impact on chickpea remains poorly understood. This [...] Read more.
Chickpea seed quality is highly susceptible to mechanical damage during handling and to rapid deterioration under postharvest storage. Atmospheric pressure Non-Thermal Plasma (NTP) has shown positive effects on seed quality in several species, but its long-term impact on chickpea remains poorly understood. This study evaluated the effect of NTP on the physiological germination process and postharvest deterioration of Cicer arietinum L. (Fabaceae) ’Felipe UNC-INTA’ seeds. Seeds were treated for three minutes with dielectric barrier discharge using O2 and N2 as carrier gases. Results showed that NTP optimized the triphasic germination response in embryo, especially in phases II and III, where radicle protrusion occurred earlier in treated (27 and 30 h) than in control (33 h) seeds, accompanied with a partition ratio < 1, indicating the roots’ preferential assimilate allocation. Fungal incidence decreased notably, e.g., Aspergillus decreased from 31% (control) to 11% (N2) and 10% (O2). O2-treated seeds exhibited higher germination (94%) than the control (90%) and an 11% reduction in individual electrical conductivity, indicating enhanced membrane integrity. After six months of storage, both treatments delayed aging, maintaining higher vigor than untreated seeds. Overall, NTP emerges as a promising postharvest technology to enhance and preserve seed vigor and viability in C. arietinum. Full article
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16 pages, 3700 KB  
Article
The Performance of Miscanthus Seeds During Long-Term Storage
by Shicheng Li, Hao Ren, Xiaoxia Huang, Zili Yi, Liang Xiao and Cheng Zheng
Plants 2025, 14(24), 3738; https://doi.org/10.3390/plants14243738 - 8 Dec 2025
Viewed by 391
Abstract
Seed storage is critical for preserving genetic resources, but optimal long-term storage conditions for Miscanthus seeds have not been established. In this five-year study, we evaluated storage protocols by comparing seed germination after four and five years, along with field establishment performance. The [...] Read more.
Seed storage is critical for preserving genetic resources, but optimal long-term storage conditions for Miscanthus seeds have not been established. In this five-year study, we evaluated storage protocols by comparing seed germination after four and five years, along with field establishment performance. The results demonstrated that genotype, storage conditions, and the storage duration all significantly influenced germination percentage and vigor index of Miscanthus seeds. Low temperature storage yielded the highest germination percentage (59.44%) and vigor index (132.06) in the 4th year, while low temperature with desiccant gave the highest germination percentage (42.41%) in the 5th year. The field performance after direct sowing was also significantly influenced by genotype and storage conditions, with the highest seedling survival (7.80%) observed under low temperature with desiccant. The seeds stored under low temperature exhibited minor structural damage, with the intact cell membranes, the small intercellular gaps, and the orderly cell arrangement. Through comprehensive evaluation, storage at −18 °C with desiccant was determined to be optimal. Based on these results, we strongly recommend storing Miscanthus seeds at −18 °C with desiccant. This protocol offers a reliable and effective solution for farmers, seed producers, and storage facilities to ensure long-term seed viability. Full article
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21 pages, 2220 KB  
Article
Phenolic Composition and Antioxidant Capacity of Pistachio Seed Coats at Different Tree Ages Under Saline Irrigation Conditions
by Takudzwa Chirenje, Rebecca Chavez, Sandhya Rijal, Irvin Arroyo, Gary S. Bañuelos and Monika Sommerhalter
Agronomy 2025, 15(12), 2816; https://doi.org/10.3390/agronomy15122816 - 7 Dec 2025
Viewed by 493
Abstract
Sustaining irrigated agriculture under drought conditions with alternative water sources such as saline groundwater requires understanding their effects on salt-tolerant crops like pistachio. During recent California droughts, pistachio trees planted in 2002, 2009, and 2011 were irrigated with high-saline water containing traces of [...] Read more.
Sustaining irrigated agriculture under drought conditions with alternative water sources such as saline groundwater requires understanding their effects on salt-tolerant crops like pistachio. During recent California droughts, pistachio trees planted in 2002, 2009, and 2011 were irrigated with high-saline water containing traces of boron (B) and selenium (Se). In 2018, irrigation was divided so that half of the trees received low-saline water, while the others continued under high-saline irrigation. Three years later, nuts were harvested to evaluate how irrigation quality affected seed coats, the main storage site of phenolic antioxidants. Sixty seed coat extracts from both irrigation treatments were analyzed for antioxidant capacity (ABTS, DPPH, FRAP and Folin–Ciocalteu assays). Nuts from the oldest trees (planted in 2002) had the highest antioxidant capacity. High-performance liquid chromatography (HPLC) identified gallic acid and nine flavonoids. Catechin, procyanidin B1, cyanidin-3-O-galactoside, and eriodictyol were most abundant in the oldest trees. Irrigation salinity significantly affected gallic acid, quercetin, and isoquercetin, with higher concentrations detected in seed coats from trees receiving continued high-saline irrigation. These compound-specific shifts, together with strong age-dependent patterns, provide insight into how long-term salinity exposure influences phenolic composition in pistachio seed coats. Full article
(This article belongs to the Special Issue Impact of Irrigation or Drainage on Soil Environment and Crop Growth)
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14 pages, 1016 KB  
Article
Response Patterns and Mechanisms of Seed Germination and Mortality of Common Plants in Subalpine Wet Meadows to In Situ Burial
by Suyao Yuan, Haijun Cui, Yuzhen Liu, Weifeng Song, Junbao Yu, Jie Li, Xuyan Zhao, Xiaoyan Wei, Xiaoting Bi, Putao Zhang, Tingting Wang and Jingyuan Pu
Plants 2025, 14(19), 2975; https://doi.org/10.3390/plants14192975 - 25 Sep 2025
Viewed by 624
Abstract
The effects of different storage conditions on seed germination and mortality may exhibit species-specific patterns. Burial serves as a natural seed storage mechanism, and its impact on seed germination and mortality holds critical implications for understanding the formation mechanisms of soil seed banks [...] Read more.
The effects of different storage conditions on seed germination and mortality may exhibit species-specific patterns. Burial serves as a natural seed storage mechanism, and its impact on seed germination and mortality holds critical implications for understanding the formation mechanisms of soil seed banks and the restoration of vegetation. Seed size is closely related to storage conditions, as it affects the ease with which seeds penetrate the soil, thereby potentially influencing their germination and mortality responses to those storage conditions. This study used 12 common plant species from a subalpine wet meadow. Employing in situ unheated storage as the control and in situ burial at a 15 cm depth (for seven months) as the experimental treatment, we aimed to explore the effects of burial on seed germination and survival, as well as the underlying mechanisms, in relation to seed size. The results showed the following: (1) Compared with the control, the burial treatment significantly increased the germination rates of four species (burial-promoted germination type), while no significant effect was observed on the germination of the remaining eight species (burial-insensitive germination type); it significantly increased the mortality rate of two species (survival-inhibited type), significantly decreased the mortality rate of four species (survival-promoted type), and had no significant impact on the mortality rate of the remaining six species (survival-insensitive type). (2) Seed size exhibited significant negative correlations with both post-burial germination rates and mortality rates under control conditions, while showing a significant positive correlation with the magnitude of mortality change. The species-specific responses of seed germination and mortality to storage conditions, and their close association with seed size, represent products of long-term plant evolution. This study provides important insights for understanding the mechanisms of soil seed bank formation and offers valuable guidance for vegetation restoration practices. Full article
(This article belongs to the Section Plant Physiology and Metabolism)
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28 pages, 5081 KB  
Article
Comprehensive Profiling of the miRNome and Degradome Reveals Regulatory Signatures of Seed Aging and Germination
by Marta Puchta-Jasińska, Paulina Bolc, Adrian Motor, Andreas Börner and Maja Boczkowska
Int. J. Mol. Sci. 2025, 26(19), 9292; https://doi.org/10.3390/ijms26199292 - 23 Sep 2025
Viewed by 914
Abstract
Small noncoding RNAs are recognized as crucial regulators of seed germination, but their role in seed aging remains unclear. To address this, we performed RNA sequencing (RNA-seq) on barley (Hordeum vulgare L.) seeds with varying viability levels after long-term storage in hermetically [...] Read more.
Small noncoding RNAs are recognized as crucial regulators of seed germination, but their role in seed aging remains unclear. To address this, we performed RNA sequencing (RNA-seq) on barley (Hordeum vulgare L.) seeds with varying viability levels after long-term storage in hermetically sealed containers since the 1972 harvest. This globally unique material, characterized by genetic homogeneity and contrasting germination capacities, enabled an in-depth analysis of microtranscriptomic changes during germination. We identified 62 known miRNAs from 11 families and 234 novel miRNAs, with miR159, miR168, and miR166 showing consistently high expression across all germination stages and viability groups. Differential expression analysis revealed 28 miRNAs whose abundance varied significantly with seed viability and germination phase. Functional predictions supported by quantitative reverse transcription PCR (qRT–PCR) and degradome-based target identification indicated that these miRNAs regulate key developmental and metabolic pathways. Several isomiRs exhibited sample-specific expression, suggesting the viability-dependent activation of distinct molecular mechanisms. Gene Ontology analysis highlighted processes related to nucleic acid binding, nuclear organization, and cytoplasmic metabolism as central during germination. We propose that miRNA profiles may reflect an “epigenetic inheritance”—a molecular memory of aging stored in seeds—rather than solely a response to current conditions. This concept may help explain aging-related phenotypes such as delayed germination and reduced vigor, warranting further investigation. Full article
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20 pages, 1203 KB  
Article
Production and Evaluation of Green Soybean (Glycine max L.) Powder Fortified with Encapsulated Crude Procyanidin Extract Powder
by Saritanot Kosonphong, Noppol Leksawasdi, Sarana Rose Sommano, Charin Techapun, Pornchai Rachtanapun, Nutsuda Sumonsiri and Julaluk Khemacheewakul
Processes 2025, 13(9), 2955; https://doi.org/10.3390/pr13092955 - 17 Sep 2025
Cited by 1 | Viewed by 902
Abstract
Green soybean (Glycine max L.), commonly known as edamame, is recognized for its rich phytochemical content and nutritional and functional benefits. However, its limited shelf life and susceptibility to quality degradation restrict its commercial potential in fresh form. To address this, green [...] Read more.
Green soybean (Glycine max L.), commonly known as edamame, is recognized for its rich phytochemical content and nutritional and functional benefits. However, its limited shelf life and susceptibility to quality degradation restrict its commercial potential in fresh form. To address this, green soybean seeds can be processed into extract and powder forms, which offer greater stability and added value. The preparation of crude procyanidin extract was examined in this study along with the effects of three distinct extraction techniques: enzyme incubation, ultrasonic-assisted extraction (UAE), and enzymatic hydrolysis followed by ultrasonic-assisted extraction (EUAE). Additionally, the effects of two drying methods (drum-drying and spray-drying) on the retention of bioactive compounds and antioxidant activity were assessed. Optimal conditions for each drying method were selected to enhance antioxidant properties by fortifying instant green soybean powder (GSP) with encapsulated crude procyanidin extract (ECPE). The chemical, physical, and sensory properties of ECPE-fortified GSP were analyzed. Results indicated that the EUAE method was the most effective for procyanidin extraction. Encapsulation allowed for procyanidin retention of over 83% after storage at 25 and 35 °C for 12 weeks. The optimal conditions were determined to be drum-drying at 3 rpm and spray-drying at an inlet temperature of 200 °C for the drying techniques. Fortification of GSP with 3–5% ECPE powder positively correlated with increased phytochemical content and antioxidant activity. Both drum- and spray-dried GSP maintained color integrity comparable to the control. Drum-dried GSP preserved greater concentrations of bioactive compounds and exhibited superior antioxidant activity compared to spray-dried GSP. All powdered products had acceptable water activity (≤0.60) and moisture content (≤12%), suggesting suitability for long-term storage. Although spray-dried powders exhibited greater hygroscopicity, they demonstrated lower emulsion stability and solubility compared to drum-dried powders. Drum-dried GSP retained higher levels of carbohydrate, fat, fiber, and ash compared with spray-dried powder, while protein content was similarly preserved by both methods. In conclusion, ECPE powder serves as a promising functional ingredient in instant green soybean powder. Both drum-dried and spray-dried GSP products exhibit potential for application in a variety of functional food products. Full article
(This article belongs to the Special Issue Food Processing and Ingredient Analysis)
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11 pages, 795 KB  
Article
The Impact of Weather Conditions and Storage Duration on the Germination of Croatian Winter Wheat (Triticum aestivum L.) Varieties
by Vedran Orkić, Sunčica Kujundžić, Sanja Grubišić Šestanj, Boris Ravnjak, Sonja Petrović, Sonja Vila, Andrijana Rebekić, Darko Kiš, Jurica Jović, Antun Jozinović, Drago Šubarić, Nicolae Marinel Horablaga, Emilian Onișan and Vlado Guberac
Agronomy 2025, 15(9), 2115; https://doi.org/10.3390/agronomy15092115 - 2 Sep 2025
Cited by 1 | Viewed by 960
Abstract
Seed germination is a key determinant of wheat seed quality, strongly affected by genetic potential, weather conditions during production, and storage duration. Although numerous studies have investigated seed viability, little is known about how the interaction between annual climatic variability and storage length [...] Read more.
Seed germination is a key determinant of wheat seed quality, strongly affected by genetic potential, weather conditions during production, and storage duration. Although numerous studies have investigated seed viability, little is known about how the interaction between annual climatic variability and storage length affects long-term germination performance of winter wheat. The objective of this study was therefore to assess the influence of weather conditions and storage period on germination energy and germination of 50 Croatian winter wheat (Triticum aestivum L.) cultivars released between 1947 and 2010. The experiment was conducted over five consecutive production years (2013/2014–2017/2018). Seeds of each cultivar were reproduced under standardized field conditions, harvested annually, and stored under identical controlled conditions (5 °C, 30–35% RH). Germination energy (first count, day 4) and total germination (final count, day 8) were evaluated according to ISTA protocols. The results revealed significant effects of both production year and cultivar on germination performance. Seeds produced in 2016/2017 exhibited the highest germination (96.21%), which was ~15% higher than the lowest rate observed in 2013/2014 (80.48%). Germination energy of 2013/2014 seeds was 23% lower compared to 2015/2016 and 2016/2017. Unexpectedly, seeds stored for only one year (2017/2018 production) showed lower germination (90.92%) than those stored for two (96.21%) or three years (95.01%), likely due to excessive rainfall (>100% above average) during seed maturation in 2018 that impaired seed quality. Several cultivars, including Una, Tonka, Žitarka, and Kuna, consistently maintained high germination rates (>94%) even after five years of storage, demonstrating strong physiological stability and long-term viability. These findings underline the combined importance of weather conditions during seed production and storage duration for seed longevity. In practical terms, cultivars with proven stability may be recommended for long-term storage and reliable field performance. Future research should extend germination assessment to additional vigor indices (e.g., germination synchrony, vigor index, abnormal seedlings) and explore genetic mechanisms underlying superior seed longevity in modern wheat breeding. Full article
(This article belongs to the Section Plant-Crop Biology and Biochemistry)
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19 pages, 1124 KB  
Article
Assessing the Potential Agronomic Value of Spent Mushroom Substrates: Evaluating Their Suitability to Contribute to Soil Carbon Storage
by María R. Yagüe, José A. González-Pérez, Gonzalo Almendros and M. Carmen Lobo
Sustainability 2025, 17(16), 7335; https://doi.org/10.3390/su17167335 - 14 Aug 2025
Viewed by 1797
Abstract
The EU’s Circular Economy Action Plan promotes the use of organic waste as fertilizer, thus allowing the recycling of nutrients in the agricultural system. Research on the agronomic reuse of composted substrates previously employed for mushroom cultivation remains limited, despite their rich content [...] Read more.
The EU’s Circular Economy Action Plan promotes the use of organic waste as fertilizer, thus allowing the recycling of nutrients in the agricultural system. Research on the agronomic reuse of composted substrates previously employed for mushroom cultivation remains limited, despite their rich content of plant residues and fungal biomass, which could be repurposed as soil amendments under suitable conditions. This study evaluated the agronomic potential of spent mushroom substrates from Agaricus bisporus and Pleurotus ostreatus, including recomposted A. bisporus residues. A range of analytical procedures was employed to assess their suitability for soil improvement and the formation of humic-like substances, including physical, chemical, microbiological, phytotoxicity, and pyrolysis-gas chromatography/mass spectrometry (Py-GC/MS) analyses. The spent Pleurotus substrate exhibited low nutrient content (1.1% N, negligible P, 0.9% K), but high water retention (820 kg water Mg−1) and 48% organic carbon (OC), indicating its potential as a soil amendment or seedling substrate. In contrast, spent and composted Agaricus substrates showed moderate nutrient content (1.8–2.7% N; 0.8–0.7% P and 1.3–1.8% K), appropriate C/N ratios (10–15), and sufficient OC levels (24–30%), supporting their use as fertilizers. However, elevated salinity levels (18–23 dS m−1) may restrict their application for salt-sensitive crops. No significant phytotoxic effects on seed germination were observed, and microbiological analyses confirmed the absence of Salmonella spp. in the three substrates. Py-GC/MS revealed a humic acid-like fraction comprising altered lignin structures enriched with lipid and nitrogen compounds. Overall, the studied materials demonstrate promising agronomic value and the capacity to contribute to long-term soil carbon storage. Full article
(This article belongs to the Section Resources and Sustainable Utilization)
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26 pages, 11108 KB  
Article
Warming in the Maternal Environment Alters Seed Performance and Genetic Diversity of Stylosanthes capitata, a Tropical Legume Forage
by Priscila Marlys Sá Rivas, Fernando Bonifácio-Anacleto, Ivan Schuster, Carlos Alberto Martinez and Ana Lilia Alzate-Marin
Genes 2025, 16(8), 913; https://doi.org/10.3390/genes16080913 - 30 Jul 2025
Viewed by 1094
Abstract
Background/Objectives: Global warming and rising CO2 concentrations pose significant challenges to plant systems. Amid these pressures, this study contributes to understanding how tropical species respond by simultaneously evaluating reproductive and genetic traits. It specifically investigates the effects of maternal exposure to [...] Read more.
Background/Objectives: Global warming and rising CO2 concentrations pose significant challenges to plant systems. Amid these pressures, this study contributes to understanding how tropical species respond by simultaneously evaluating reproductive and genetic traits. It specifically investigates the effects of maternal exposure to warming and elevated CO2 on progeny physiology, genetic diversity, and population structure in Stylosanthes capitata, a resilient forage legume native to Brazil. Methods: Maternal plants were cultivated under controlled treatments, including ambient conditions (control), elevated CO2 at 600 ppm (eCO2), elevated temperature at +2 °C (eTE), and their combined exposure (eTEeCO2), within a Trop-T-FACE field facility (Temperature Free-Air Controlled Enhancement and Free-Air Carbon Dioxide Enrichment). Seed traits (seeds per inflorescence, hundred-seed mass, abortion, non-viable seeds, coat color, germination at 32, 40, 71 weeks) and abnormal seedling rates were quantified. Genetic diversity metrics included the average (A) and effective (Ae) number of alleles, observed (Ho) and expected (He) heterozygosity, and inbreeding coefficient (Fis). Population structure was assessed using Principal Coordinates Analysis (PCoA), Analysis of Molecular Variance (AMOVA), number of migrants per generation (Nm), and genetic differentiation index (Fst). Two- and three-way Analysis of Variance (ANOVA) were used to evaluate factor effects. Results: Compared to control conditions, warming increased seeds per inflorescence (+46%), reduced abortion (−42.9%), non-viable seeds (−57%), and altered coat color. The germination speed index (GSI +23.5%) and germination rate (Gr +11%) improved with warming; combined treatments decreased germination time (GT −9.6%). Storage preserved germination traits, with warming enhancing performance over time and reducing abnormal seedlings (−54.5%). Conversely, elevated CO2 shortened GSI in late stages, impairing germination efficiency. Warming reduced Ae (−35%), He (−20%), and raised Fis (maternal 0.50, progeny 0.58), consistent with the species’ mixed mating system; A and Ho were unaffected. Allele frequency shifts suggested selective pressure under eTE. Warming induced slight structure in PCoA, and AMOVA detected 1% (maternal) and 9% (progeny) variation. Fst = 0.06 and Nm = 3.8 imply environmental influence without isolation. Conclusions: Warming significantly shapes seed quality, reproductive success, and genetic diversity in S. capitata. Improved reproduction and germination suggest adaptive advantages, but higher inbreeding and reduced diversity may constrain long-term resilience. The findings underscore the need for genetic monitoring and broader genetic bases in cultivars confronting environmental stressors. Full article
(This article belongs to the Special Issue Genetics and Breeding of Forage)
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20 pages, 2342 KB  
Article
Metabolomic Profiling of Desiccation Response in Recalcitrant Quercus acutissima Seeds
by Haiyan Chen, Fenghou Shi, Boqiang Tong, Yizeng Lu and Yongbao Shen
Agronomy 2025, 15(7), 1738; https://doi.org/10.3390/agronomy15071738 - 18 Jul 2025
Cited by 1 | Viewed by 932
Abstract
Quercus acutissima seeds exhibit high desiccation sensitivity, posing significant challenges for long-term preservation. This study investigates the physiological and metabolic responses of soluble osmoprotectants—particularly soluble proteins and proline—during the desiccation process. Seeds were sampled at three critical moisture content levels: 38.8%, 26.8%, and [...] Read more.
Quercus acutissima seeds exhibit high desiccation sensitivity, posing significant challenges for long-term preservation. This study investigates the physiological and metabolic responses of soluble osmoprotectants—particularly soluble proteins and proline—during the desiccation process. Seeds were sampled at three critical moisture content levels: 38.8%, 26.8%, and 14.8%, corresponding to approximately 99%, 52%, and 0% germination, respectively. We measured germination ability, soluble protein content, and proline accumulation, and we performed untargeted metabolomic profiling using LC-MS. Soluble protein levels increased early but declined later during desiccation, while proline levels continuously increased for sustained osmotic adjustment. Metabolomics analysis identified a total of 2802 metabolites, with phenylpropanoids and polyketides (31.12%) and lipids and lipid-like molecules (29.05%) being the most abundant. Kyoto Encyclopedia of Genes and Genomes pathway enrichment analysis showed that differentially expressed metabolites were mainly enriched in key pathways such as amino acid metabolism, energy metabolism, and nitrogen metabolism. Notably, most amino acids decreased in content, except for proline, which showed an increasing trend. Tricarboxylic acid cycle intermediates, especially citric acid and isocitric acid, showed significantly decreased levels, indicating energy metabolism imbalance due to uncoordinated consumption without effective replenishment. The reductions in key amino acids such as glutamic acid and aspartic acid further reflected metabolic network disruption. In summary, Q. acutissima seeds fail to establish an effective desiccation tolerance mechanism. The loss of soluble protein-based protection, limited capacity for proline-mediated osmotic regulation, and widespread metabolic disruption collectively lead to irreversible cellular damage. These findings highlight the inherent metabolic vulnerabilities of recalcitrant seeds and suggest potential preservation strategies, such as supplementing critical metabolites (e.g., TCA intermediates) during storage to delay metabolic collapse and mitigate desiccation-induced damage. Full article
(This article belongs to the Section Plant-Crop Biology and Biochemistry)
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Article
Effects of Low-Temperature Plasma Treatment on Germination, Seedling Development, and Biochemical Parameters of Long-Term-Stored Seeds
by Martin Matějovič, Vladislav Čurn, Jan Kubeš, Eva Jozová, Zora Kotíková and Petra Hlásná Čepková
Agronomy 2025, 15(7), 1637; https://doi.org/10.3390/agronomy15071637 - 4 Jul 2025
Cited by 2 | Viewed by 2079
Abstract
The promising field of low-temperature plasma treatment, known for its non-invasive and environmentally sustainable nature, is being actively investigated for its ability to enhance germination, emergence, yield, and overall plant development in a broad spectrum of crops. For gene bank requirements, low-temperature plasma [...] Read more.
The promising field of low-temperature plasma treatment, known for its non-invasive and environmentally sustainable nature, is being actively investigated for its ability to enhance germination, emergence, yield, and overall plant development in a broad spectrum of crops. For gene bank requirements, low-temperature plasma technologies can also improve germination parameters and promote the development seeds suitable for long-term storage. Seeds from four selected cultivars of wheat, oats, flax, and rapeseed stored in the gene bank for 1, 10, and 20 years were subjected to plasma treatments for 20, 25, and 30 min. The study evaluated the mean root and shoot length, root–shoot ratio, and seedling vigour index. Additionally, the malondialdehyde level, total polyphenol content, total flavonoid content, and total antioxidant capacity were analysed. Plasma treatment displayed varying effects on the morphological characteristics and antioxidant activity of the tested cultivars, which were influenced by treatment duration and cultivar. A positive effect of plasma treatment on seedling length, seedling vigour index, and root–shoot ratio was observed in flax cultivar ‘N-9/62/K3/B’ in all periods and in variants T2 and T3. Conversely, the wheat cultivar ‘Granny’ showed variable results, and the oat cultivar ‘Risto’ showed variable negative results in regards to mean root length and mean shoot length after plasma treatment. The indicators of oxidative stress and antioxidant capacity were affected in all the cultivars studied. A positive effect of plasma treatment on these indicators was observed in the wheat cultivar ‘Granny’, while flax cultivar ‘N-9/62/K3/B’ exhibited inconsistent results. While in cereals, a decrease in malondialdehyde content after plasma treatment was associated with an increase in polyphenol and flavonoid content as the treatment duration increased, small-seeded species responded somewhat differently. The rapeseed cultivar ‘Skrivenskij’ and flax cultivar ‘N-9/62/K3/B’ showed an increase in polyphenol and flavonoid content following a decrease in malondialdehyde levels. This study highlights the potential of low-temperature plasma treatment for long-term-stored seeds and its applicability to plant genetic resources. The findings emphasize the need for the further optimization of low-temperature plasma treatment conditions for different plant species and cultivars. Full article
(This article belongs to the Section Farming Sustainability)
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