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16 pages, 2629 KB  
Article
The Diversity and Biochemical Composition of Zooplankton as a Potential Indicator of Dietary Requirements for Pikeperch Larvae (Sander lucioperca)
by Anatoliy Lyutikov, Alexander Korolev, Artem Trifonov, Anastasia Zubareva and Artem Nedoluzhko
Hydrobiology 2025, 4(2), 13; https://doi.org/10.3390/hydrobiology4020013 - 6 May 2025
Viewed by 2165
Abstract
Freshwater fish species play an important role in global aquaculture. Currently, sturgeon, carp, and tilapia are at the forefront of this industry. However, as human populations continue to grow, the demand for new sources of animal protein increases, making the use of other [...] Read more.
Freshwater fish species play an important role in global aquaculture. Currently, sturgeon, carp, and tilapia are at the forefront of this industry. However, as human populations continue to grow, the demand for new sources of animal protein increases, making the use of other freshwater species in aquaculture essential. The pikeperch (Sander lucioperca) is one of the most promising fish species for European aquaculture, but its usage has been hindered by a lack of effective larval-rearing protocols. Most studies focus on using cultured or nutrient-rich zooplankton for larval cultivation, while natural zooplankton from the local environment are rarely used. In this study, we aim to investigate the nutritional requirements of pikeperch larvae by describing the taxonomic diversity and biochemical composition of zooplankton collected from a natural oligotrophic lake in Northwest Russia. The chemical composition of zooplankton is characterized by a high protein content (up to 70% of dry matter), a moderate lipid content (up to 25%), and a deficiency of certain fatty acids and amino acids. Specifically, there is a low concentration of docosahexaenoic acid and methionine. The dry matter content in the zooplankton averages 10%, with nitrogen-free extracts accounting for 4% and ash making up 4%. These biochemical parameters meet the nutritional requirements of freshwater pikeperch larvae, with the notable exception of the lower levels of DHA and methionine, which are typically characteristic of freshwater zooplankton. This information sheds light on the nutritional requirements of pikeperch larvae and the development of more efficient rearing methods. Full article
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38 pages, 3907 KB  
Article
Genomic and Epidemiological Investigations Reveal Chromosomal Integration of the Acipenserid Herpesvirus 3 Genome in Lake Sturgeon Acipenser fulvescens
by Sharon Clouthier, Umberto Rosani, Arfa Khan, Qiuwen Ding, Eveline Emmenegger, Zhuozhi Wang, Thomas Nalpathamkalam and Bhooma Thiruvahindrapuram
Viruses 2025, 17(4), 534; https://doi.org/10.3390/v17040534 - 5 Apr 2025
Viewed by 2018
Abstract
DNA sequence from a new alloherpesvirus named acipenserid herpesvirus 3 (AciHV-3) was found in sturgeon species that are vulnerable to decline globally. A study was undertaken to develop a better understanding of the virus genome and to develop diagnostic tools to support an [...] Read more.
DNA sequence from a new alloherpesvirus named acipenserid herpesvirus 3 (AciHV-3) was found in sturgeon species that are vulnerable to decline globally. A study was undertaken to develop a better understanding of the virus genome and to develop diagnostic tools to support an epidemiological investigation. A 184,426 bp genome was assembled from PacBio HiFi sequences generated with DNA from a Lake Sturgeon Acipenser fulvescens gonad cell line. The AciHV-3 genome was contiguous with host chromosomal DNA and was structured with telomere-like terminal direct repeat regions, five internal direct repeat regions and a U region that included intact open reading frames encoding alloherpesvirus core proteins. Diagnostic testing conducted with a newly developed and analytically validated qPCR assay established the ubiquitous presence and high titer of AciHV-3 DNA in somatic and germline tissues from wild Lake Sturgeon in the Hudson Bay drainage basin. Phylogenetic reconstructions confirm that the monophyletic AciHV-3 lineage shares a common ancestor with AciHV-1 and that AciHV-3 taxa cluster according to their sturgeon host. The same genotype of AciHV-3 is found in disjunctive Lake Sturgeon populations within and among drainage basins. The results support the hypotheses that AciHV-3 has established latency through germline chromosomal integration, is vertically transmitted via a Mendelian pattern of inheritance, is evolving in a manner consistent with a replication competent virus and has co-evolved with its host reaching genetic fixation in Lake Sturgeon populations in central Canada. Full article
(This article belongs to the Special Issue Animal Herpesvirus)
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18 pages, 985 KB  
Article
Community Structure Characteristics and Changes in Fish Species at Poyang Lake after the Yangtze River Fishing Ban
by Yanping Zhang, Haixin Zhang, Zijun Wu, Mingguang Zhao and Guangpeng Feng
Fishes 2024, 9(7), 281; https://doi.org/10.3390/fishes9070281 - 15 Jul 2024
Cited by 17 | Viewed by 4703
Abstract
To understand the fish community structure characteristics and changes in Poyang Lake after the Yangtze River fishing ban in 2021, seven sampling stations were established, namely in Hukou, Lushan, Duchang, Yongxiu, Nanjishan, Ruihong, and Poyang, for fishery resource surveys between 2020 and 2021. [...] Read more.
To understand the fish community structure characteristics and changes in Poyang Lake after the Yangtze River fishing ban in 2021, seven sampling stations were established, namely in Hukou, Lushan, Duchang, Yongxiu, Nanjishan, Ruihong, and Poyang, for fishery resource surveys between 2020 and 2021. The results showed that 93 fish species were identified, belonging to 11 orders, 20 families, and 61 genera, which was an increase of 4.5% from before the fishing ban. Of these, 52 Cyprinidae species were identified, comprising the highest proportion (55.91%). Four invasive alien species (hybrid sturgeon, Cirrhina mrigala, Piaractus brachypomus, and Mugil cephalus) were identified, and the number of alien species in Poyang Lake was higher than before the fishing ban. Carnivorous and mid-lower-level fish showed a significant increase, accounting for 47.31% and 38.71% of the total species, respectively. Compared with the Yangtze River before the fishing ban, the body length and body weight of the main economic fish in Poyang Lake increased by 6.10–61.26% and by 15.14–291.57%, respectively. In terms of age structure, the proportion of major economically important fish aged 1 or 2 years decreased significantly, while the proportion of older fish increased substantially. There was little difference in the diversity of fish communities at different stations in Poyang Lake. In terms of biodiversity, the Shannon–Wiener index ranged from 2.158 to 2.909, with Poyang having the highest value and Nanjishan the lowest. Margalef’s index ranged from 4.265 to 6.459, with Lushan having the highest value and Nanjishan the lowest. Pielou’s index ranged from 0.617 to 0.822, with Duchang having the highest value and Nanjishan the lowest. Hence, the Yangtze river fishing ban has played an important and positive role in the restoration of fishery resources in Poyang Lake. However, long-term tracking and monitoring are needed to provide information to comprehensively evaluate the ecological impact of the Poyang Lake fishing ban. Full article
(This article belongs to the Special Issue Biodiversity and Spatial Distribution of Fishes)
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8 pages, 233 KB  
Article
Assessing the Efficacy of Three Hatchery Disinfectants for the Inactivation of a Lake Sturgeon Herpesvirus (Family: Alloherpesviridae)
by Amber E. Johnston, Megan A. Shavalier, Kim T. Scribner, Esteban Soto, Susan Yun and Thomas P. Loch
Viruses 2024, 16(7), 1062; https://doi.org/10.3390/v16071062 - 30 Jun 2024
Cited by 1 | Viewed by 2729
Abstract
Infectious diseases are a leading cause of losses in the aquaculture industry and conservation programs globally. Simultaneously, infectious diseases pose a substantial risk to fish being hatchery-reared and released into natural habitats for conservation purposes, including the Great Lakes lake sturgeon (Acipenser [...] Read more.
Infectious diseases are a leading cause of losses in the aquaculture industry and conservation programs globally. Simultaneously, infectious diseases pose a substantial risk to fish being hatchery-reared and released into natural habitats for conservation purposes, including the Great Lakes lake sturgeon (Acipenser fulvescens, i.e., GL-LST). Recently, an alloherpesvirus (lake sturgeon herpesvirus 2, i.e., LSHV-2) capable of inducing disease and/or mortality in adult and juvenile GL-LSTs was detected in two adult GL-LST populations. To begin developing disease prevention and/or control methods, in vitro experiments were designed to determine the susceptibility of LSHV-2 to disinfectants commonly used in hatchery and aquaculture facilities (Virkon®-Aquatic: potassium peroxymonosulfate; Ovadine®: polyvinylpyrrolidone iodine complex; and Perox-Aid®: hydrogen peroxide). Cultured LSHV-2 was exposed to each disinfectant at two concentrations (Virkon®-Aquatic: 0.5% and 1%; Ovadine®: 50 and 100 ppm; and Perox-Aid®: 500 and 1000 ppm) in duplicate for durations of 1, 10, and 30 min. Following exposure, the disinfectant was neutralized, and after a 14-day incubation period on a white sturgeon × lake sturgeon hybrid cell line (WSxLS), percent reduction was calculated by comparing the 50% tissue culture infectious doses (TCID50/mL) of the virus with and without disinfectant exposure. When exposed to Perox-Aid®, LSHV-2 percent reduction ranged from 58.7% to 99.5%. When exposed to Ovadine®, the percent reduction ranged from 99.4% to 100%. Lastly, the percent reduction when exposed to Virkon®-Aquatic was 100% for both concentrations and all timepoints. The results herein provide evidence that both Virkon®-Aquatic and Ovadine® are virucidal to LSHV-2 and may represent a means to reduce virus transmission risk under field settings. Full article
21 pages, 2534 KB  
Article
Five Species of Wild Freshwater Sport Fish in Wisconsin, USA, Reveal Highly Diverse Viromes
by Charlotte E. Ford, Christopher D. Dunn, Eric M. Leis, Whitney A. Thiel and Tony L. Goldberg
Pathogens 2024, 13(2), 150; https://doi.org/10.3390/pathogens13020150 - 7 Feb 2024
Cited by 7 | Viewed by 3823
Abstract
Studies of marine fish have revealed distant relatives of viruses important to global fish and animal health, but few such studies exist for freshwater fish. To investigate whether freshwater fish also host such viruses, we characterized the viromes of five wild species of [...] Read more.
Studies of marine fish have revealed distant relatives of viruses important to global fish and animal health, but few such studies exist for freshwater fish. To investigate whether freshwater fish also host such viruses, we characterized the viromes of five wild species of freshwater fish in Wisconsin, USA: bluegill (Lepomis macrochirus), brown trout (Salmo trutta), lake sturgeon (Acipenser fulvescens), northern pike (Esox lucius), and walleye (Sander vitreus). We analyzed 103 blood serum samples collected during a state-wide survey from 2016 to 2020 and used a metagenomic approach for virus detection to identify known and previously uncharacterized virus sequences. We then characterized viruses phylogenetically and quantified prevalence, richness, and relative abundance for each virus. Within these viromes, we identified 19 viruses from 11 viral families: Amnoonviridae, Circoviridae, Coronaviridae, Hepadnaviridae, Peribunyaviridae, Picobirnaviridae, Picornaviridae, Matonaviridae, Narnaviridae, Nudnaviridae, and Spinareoviridae, 17 of which were previously undescribed. Among these viruses was the first fish-associated coronavirus from the Gammacoronavirus genus, which was present in 11/15 (73%) of S. vitreus. These results demonstrate that, similar to marine fish, freshwater fish also harbor diverse relatives of viruses important to the health of fish and other animals, although it currently remains unknown what effect, if any, the viruses we identified may have on fish health. Full article
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10 pages, 426 KB  
Communication
Rewilding the Detroit, Michigan, USA–Windsor, Ontario, Canada Metropolitan Area
by John H. Hartig
Resources 2023, 12(10), 117; https://doi.org/10.3390/resources12100117 - 1 Oct 2023
Cited by 5 | Viewed by 4693
Abstract
Rewilding attempts to increase biodiversity and restore natural ecosystem processes by reducing human influence. Today, there is growing interest in rewilding urban areas. Rewilding of the Detroit, Michigan, USA and Windsor, Ontario, Canada metropolitan area, and its shared natural resource called the Detroit [...] Read more.
Rewilding attempts to increase biodiversity and restore natural ecosystem processes by reducing human influence. Today, there is growing interest in rewilding urban areas. Rewilding of the Detroit, Michigan, USA and Windsor, Ontario, Canada metropolitan area, and its shared natural resource called the Detroit River, has been delineated through the reintroduction of peregrine falcons and osprey, and a return of other sentinel species like bald eagles, lake sturgeon, lake whitefish, walleye, beaver, and river otter. Rewilding has helped showcase the value and benefits of environmental protection and restoration, ecosystem services, habitat rehabilitation and enhancement, and conservation, including social and economic benefits. Improved ecosystem health and rewilding have become a catalyst for re-establishing a reconnection between urban denizens and natural resources through greenways and water trails. The provision of compelling outdoor experiences in nature, in turn, can help foster a personal attachment to the particular place people call home that can help inspire a stewardship ethic. Full article
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26 pages, 3394 KB  
Article
A New Sturgeon Herpesvirus from Juvenile Lake Sturgeon Acipenser fulvescens Displaying Epithelial Skin Lesions
by Sharon Clouthier, Marek Tomczyk, Tamara Schroeder, Cheryl Klassen, André Dufresne, Eveline Emmenegger, Thomas Nalpathamkalam, Zhuozhi Wang and Bhooma Thiruvahindrapuram
Pathogens 2023, 12(9), 1115; https://doi.org/10.3390/pathogens12091115 - 31 Aug 2023
Cited by 3 | Viewed by 2843
Abstract
Herpesvirus infections of sturgeon pose a potential threat to sturgeon culture efforts worldwide. A new epitheliotropic herpesvirus named Acipenser herpesvirus 3 (AciHV-3) was detected in hatchery-reared Lake Sturgeon Acipenser fulvescens displaying skin lesions in central Canada. The growths were discovered in the fall, [...] Read more.
Herpesvirus infections of sturgeon pose a potential threat to sturgeon culture efforts worldwide. A new epitheliotropic herpesvirus named Acipenser herpesvirus 3 (AciHV-3) was detected in hatchery-reared Lake Sturgeon Acipenser fulvescens displaying skin lesions in central Canada. The growths were discovered in the fall, reached average prevalence levels of 0.2–40% and eventually regressed. No unusual mortality was observed. The cellular changes within the lesions included epithelial hyperplasia and were reminiscent of other herpesvirus infections. The virus was not evident in lesions examined by electron microscopy. Skin tissue homogenates from symptomatic sturgeon produced atypical cytopathic effects on a primary Lake Sturgeon cell line, and next-generation sequence analysis of the DNA samples revealed the presence of an alloherpesvirus. A new genotyping PCR assay targeting the major capsid protein sequence detected AciHV-3 in symptomatic Lake Sturgeon as well as other apparently healthy sturgeon species. Bayesian inference of phylogeny reconstructed with a concatenation of five alloherpesvirus core proteins revealed a new Alloherpesviridae lineage isomorphic with a new genus. The presence of AciHV-3 homologs in cell lines and sturgeon sequence datasets, low sequence divergence among these homologs and branching patterns within the genotyping phylogeny provide preliminary evidence of an endogenous virus lifestyle established in an ancestral sturgeon. Full article
(This article belongs to the Special Issue Emerging Infections in Aquatic Animals)
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21 pages, 2438 KB  
Article
Conservation Genetics of Lake Sturgeon (Acipenser fulvescens): Nuclear Phylogeography Drives Contemporary Patterns of Genetic Structure and Diversity
by Shawna L. Kjartanson, Tim Haxton, Kristyne Wozney, Nathan R. Lovejoy and Chris C. Wilson
Diversity 2023, 15(3), 385; https://doi.org/10.3390/d15030385 - 7 Mar 2023
Cited by 10 | Viewed by 4586
Abstract
Sustainable management of exploited and endangered species is facilitated by knowledge of their geographic genetic structure. Lake sturgeon (Acipenser fulvescens) epitomizes both categories, but genetic information has largely been limited to the Laurentian Great Lakes basin. We assessed the hierarchical geographic [...] Read more.
Sustainable management of exploited and endangered species is facilitated by knowledge of their geographic genetic structure. Lake sturgeon (Acipenser fulvescens) epitomizes both categories, but genetic information has largely been limited to the Laurentian Great Lakes basin. We assessed the hierarchical geographic genetic structure of lake sturgeon across their Canadian range using a variation at 14 microsatellite loci. Observed patterns showed evidence of two ancestral groups which originated from Mississippian and Missourian glacial refugia. Coalescent analysis indicates the two lineages most recently shared common ancestry during the late Pleistocene and were likely isolated by the late Wisconsinan ice advance, with subsequent interpopulation divergences within each lineage reflecting their reciprocal isolation as glacial meltwaters receded. Hierarchical patterns of genetic relationships among contemporary populations largely reflect colonization histories and connections within primary and secondary watersheds. Populations in western Canada showed strong similarities based on their shared Missourian origins and colonization from glacial Lake Agassiz. By contrast, populations in the Great Lakes–St. Lawrence River drainage were largely founded from a Mississippian source. Sturgeon populations in northern parts of Ontario and Quebec showed evidence of mixed ancestry from secondary contact between the two refugial groups through Holocene meltwater lakes. Within major watersheds, the strong similarity among geographically separate populations reflects their shared ancestry during postglacial colonization. The general lack of structure within major river systems highlights historically continuous habitat (connectivity) and gene flow rather than contemporary barriers (dams). These data highlight the importance of Quaternary and prehistoric events on patterns of genetic diversity and divergence within and among contemporary populations, as well as the importance of these populations for conserving the species’ evolutionary legacy. Full article
(This article belongs to the Special Issue Conservation Genetics of Sturgeons)
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9 pages, 247 KB  
Article
Parentage Analysis Reveals Unequal Family Sizes during Hatchery Production
by Mary Akers, Henry Quinlan, Andrew Johnson, Edward Baker and Amy Welsh
Fishes 2023, 8(3), 140; https://doi.org/10.3390/fishes8030140 - 28 Feb 2023
Cited by 3 | Viewed by 2316
Abstract
Lake sturgeon (Acipenser fulvescens) is a species of conservation concern that has been stocked in several Great Lakes (North America) rivers. Lake sturgeon were extirpated in the Ontonagon River in Lake Superior and stocking began in 1998. In 2017, gametes were [...] Read more.
Lake sturgeon (Acipenser fulvescens) is a species of conservation concern that has been stocked in several Great Lakes (North America) rivers. Lake sturgeon were extirpated in the Ontonagon River in Lake Superior and stocking began in 1998. In 2017, gametes were collected from spawning lake sturgeon (9 females, 36 males) caught at the nearby Sturgeon River spawning ground, generating nine family groups using a 1:4 mating design (n = 862). In 2018, gametes were collected from 3 females and 15 males, generating three family groups, and additional collections of drifting fry from the Sturgeon River were reared in the hatchery, resulting in 84 hatchery-produced and 675 wild-caught fry for stocking in the Ontonagon River. The objective of this study was to compare paternal representation and genetic diversity between the two stocking strategies. Parentage analysis based on genetic data from 12 microsatellite loci determined none of the family groups in the hatchery had equal paternal representation (p < 0.001), while wild-produced offspring had equal paternal representation. Despite the larger number of breeders contributing to the wild-caught larvae, there was no significant difference in genetic diversity between the wild-caught larvae and representative hatchery-produced offspring. Full article
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26 pages, 8154 KB  
Article
First Isolation of a Herpesvirus (Family Alloherpesviridae) from Great Lakes Lake Sturgeon (Acipenser fulvescens)
by Amber E. Johnston, Megan A. Shavalier, Kim T. Scribner, Esteban Soto, Matt J. Griffin, Geoffrey C. Waldbieser, Bradley M. Richardson, Andrew D. Winters, Susan Yun, Edward A. Baker, Douglas L. Larson, Matti Kiupel and Thomas P. Loch
Animals 2022, 12(23), 3230; https://doi.org/10.3390/ani12233230 - 22 Nov 2022
Cited by 9 | Viewed by 5000
Abstract
The lake sturgeon (Acipenser fulvescens; LST) is the only native sturgeon species in the Great Lakes (GL), but due to multiple factors, their current populations are estimated to be <1% of historical abundances. Little is known about infectious diseases affecting GL-LST [...] Read more.
The lake sturgeon (Acipenser fulvescens; LST) is the only native sturgeon species in the Great Lakes (GL), but due to multiple factors, their current populations are estimated to be <1% of historical abundances. Little is known about infectious diseases affecting GL-LST in hatchery and wild settings. Therefore, a two-year disease surveillance study was undertaken, resulting in the detection and first in vitro isolation of a herpesvirus from grossly apparent cutaneous lesions in wild adult LST inhabiting two GL watersheds (Erie and Huron). Histological and ultrastructural examination of lesions revealed proliferative epidermitis associated with herpesvirus-like virions. A virus with identical ultrastructural characteristics was recovered from cells inoculated with lesion tissues. Partial DNA polymerase gene sequencing placed the virus within the Family Alloherpesviridae, with high similarity to a lake sturgeon herpesvirus (LSHV) from Wisconsin, USA. Genomic comparisons revealed ~84% Average Nucleotide Identity between the two isolates, leading to the proposed classification of LSHV-1 (Wisconsin) and LSHV-2 (Michigan) for the two viruses. When naïve juvenile LST were immersion-exposed to LSHV-2, severe disease and ~33% mortality occurred, with virus re-isolated from representative skin lesions, fulfilling Rivers’ postulates. Results collectively show LSHV-2 is associated with epithelial changes in wild adult LST, disease and mortality in juvenile LST, and is a potential threat to GL-LST conservation. Full article
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15 pages, 1621 KB  
Article
Feeding Strategies for Adapting Lake Sturgeon (Acipenser fulvescens) Larvae to Formulated Diets at Early Life Stages
by Seunghyung Lee, Shaowei Zhai, Dong-Fang Deng, Yuquan Li, Patrick Christopher Blaufuss, Bradley T. Eggold and Fred Binkowski
Animals 2022, 12(22), 3128; https://doi.org/10.3390/ani12223128 - 13 Nov 2022
Cited by 5 | Viewed by 3573
Abstract
Cost-effective feeding management is required to support conservation hatcheries for lake sturgeon (Acipenser fulvescens), an ecologically important species in the Great Lakes region. This study investigated an approach to transition lake sturgeon larvae from live feed (Artemia) to formulated [...] Read more.
Cost-effective feeding management is required to support conservation hatcheries for lake sturgeon (Acipenser fulvescens), an ecologically important species in the Great Lakes region. This study investigated an approach to transition lake sturgeon larvae from live feed (Artemia) to formulated feed and its effect on growth performance, survival, and response to acute hypoxia stress. The first experiment showed that sturgeon had similar (p > 0.05) growth and survival when fed Artemia or the combined feeding of Artemia with the commercial diet (crude protein, 551 g/kg diet). Feeding solely on the commercial or lab-made (crude protein, 491 g/kg diet) diet significantly reduced growth and survival (p < 0.05). In the second experiment, the growth performance of sturgeon (14 days post-hatch, DPH) fed with either Artemia only or combined feeding different feeding durations of two, three, and four weeks followed by a complete transition to the commercial diet. At the end of six weeks, the 3- and 4-week combined feeding periods resulted in significantly higher body weight and survival compared to the 2-week combined and the Artemia only feeding treatments. In the last experiment, sturgeons (27 DPH) were fed only with Artemia or combined feeding of Artemia with the commercial diet for four weeks followed by the complete transition to the commercial diet for two weeks. Eighteen fish from each treatment were investigated the response to acute hypoxic conditions (gradual decrease in dissolved oxygen level from 8 to 2.3 mg/L at the rate of 1 mg/L per hour). When the dissolved oxygen was between 3 and 4 mg/L, the mortality rate of the combination-fed sturgeon (11.7%) was significantly lower than those fed only Artemia (83.3%). These results clearly demonstrate that a commercial diet can partially replace Artemia at early life stages to improve growth, survival, and hypoxia tolerance and thus its co-feeding with Artemia is recommended. Full article
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8 pages, 810 KB  
Brief Report
Real-Time PCR-Based Method for Sex Determination in Lake Sturgeon (Acipenser fulvescens)
by Jeannette Kanefsky, Seth Smith and Kim T. Scribner
Diversity 2022, 14(10), 839; https://doi.org/10.3390/d14100839 - 5 Oct 2022
Cited by 9 | Viewed by 3967
Abstract
The characterization of demographic features in natural populations is important to understand recruitment dynamics, mating systems, and propensities for loss of genetic diversity. The accurate identification of sex can be difficult in sexually monomorphic species. We present a melt curve analysis based on [...] Read more.
The characterization of demographic features in natural populations is important to understand recruitment dynamics, mating systems, and propensities for loss of genetic diversity. The accurate identification of sex can be difficult in sexually monomorphic species. We present a melt curve analysis based on qPCR assays for lake sturgeon (Acipenser fulvescens) sex identification and validation using the AllWSex2 marker and adult males and females (total N = 143) with an assigned field sex from two populations (Black Lake, MI, and Menominee River, MI–WI border, USA). The assay is highly accurate (~98% concordance between putative or confirmed field and molecular sex classification), fast, and easy to use. The detected inconsistencies between field and molecular sexing were partially attributed to field-sexing uncertainty. This method will allow researchers to rapidly determine the sex of individuals of this regionally threatened species to use in conservation efforts and research. Full article
(This article belongs to the Special Issue Conservation Genetics of Sturgeons)
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25 pages, 1917 KB  
Article
Compositional Dynamics of Gastrointestinal Tract Microbiomes Associated with Dietary Transition and Feeding Cessation in Lake Sturgeon Larvae
by Shairah Abdul Razak, Shaley Valentine, Terence Marsh, John Bauman, Norfarhan Mohd-Assaad and Kim T. Scribner
Microorganisms 2022, 10(9), 1872; https://doi.org/10.3390/microorganisms10091872 - 19 Sep 2022
Cited by 4 | Viewed by 3364
Abstract
Compromised nutritional conditions associated with dietary transitions and feeding cessation in the wild and during fish aquaculture operations are common and can impact growth and survival. These effects are especially prevalent during early ontogenetic stages. We quantified phenotypic and GI tract microbial community [...] Read more.
Compromised nutritional conditions associated with dietary transitions and feeding cessation in the wild and during fish aquaculture operations are common and can impact growth and survival. These effects are especially prevalent during early ontogenetic stages. We quantified phenotypic and GI tract microbial community responses with an emphasis on protease-producing bacteria of lake sturgeon (Acipenser fulvescens) larvae, a species of aquacultural and conservational importance. To quantify responses associated with experimental food transition and feeding cessation, we performed a 36-day feeding experiment using two treatments: control and diet transition. However, larvae in the diet transition treatment failed to undergo transition and ceased feeding. Larvae in the diet transition treatment exhibited lower growth (total length and body weight) and survival than control larvae. Treatment had a greater effect than ontogenetic changes on taxonomic composition and diversity of the GI tract microbial community. Proteobacteria dominated the GI tract microbial community of the diet transition larvae whereas Firmicutes dominated the GI tracts of control larvae. Most of the 98 identified protease-producing isolates in both treatments were from genera Pseudomonas and Aeromonas: taxonomic groups that include known fish pathogens. Overall, failing to transition diets affected responses in growth and GI tract microbiome composition and diversity, with the later dysbiosis being an indicator of morbidity and mortality in larval lake sturgeon. Thus, microbiological interrogations can characterize responses to dietary regimes. The results can inform fish culturalists and microbiologists of the importance of dietary practices consistent with the establishment and maintenance of healthy GI tract microbiota and optimal growth during early ontogeny. Full article
(This article belongs to the Special Issue Microbiomes of Aquatic Organisms)
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22 pages, 3235 KB  
Article
Changes in Lake Sturgeon Gut Microbiomes Relative to Founding Origin and in Response to Chemotherapeutant Treatments
by Shairah Abdul Razak, John M. Bauman, Terence L. Marsh and Kim T. Scribner
Microorganisms 2022, 10(5), 1005; https://doi.org/10.3390/microorganisms10051005 - 10 May 2022
Cited by 9 | Viewed by 3107
Abstract
Antibiotics, drugs, and chemicals (collectively referred to as chemotherapeutants) are widely embraced in fish aquaculture as important tools to control or prevent disease outbreaks. Potential negative effects include changes in microbial community composition and diversity during early life stages, which can reverse the [...] Read more.
Antibiotics, drugs, and chemicals (collectively referred to as chemotherapeutants) are widely embraced in fish aquaculture as important tools to control or prevent disease outbreaks. Potential negative effects include changes in microbial community composition and diversity during early life stages, which can reverse the beneficial roles of gut microbiota for the maintenance of host physiological processes and homeostatic regulation. We characterized the gut microbial community composition and diversity of an ecologically and economically important fish species, the lake sturgeon (Acipenser fulvescens), during the early larval period in response to weekly treatments using chemotherapeutants commonly used in aquaculture (chloramine-T, hydrogen peroxide, and NaCl2 followed by hydrogen peroxide) relative to untreated controls. The effects of founding microbial community origin (wild stream vs. hatchery water) were also evaluated. Gut communities were quantified using massively parallel next generation sequencing based on the V4 region of the 16S rRNA gene. Members of the phylum Firmicutes (principally unclassified Clostridiales and Clostridium_sensu_stricto) and Proteobacteria were the dominant taxa in all gut samples regardless of treatment. The egg incubation environment (origin) and its interaction with chemotherapeutant treatment were significantly associated with indices of microbial taxonomic diversity. We observed large variation in the beta diversity of lake sturgeon gut microbiota between larvae from eggs incubated in hatchery and wild (stream) origins based on nonmetric dimensional scaling (NMDS). Permutational ANOVA indicated the effects of chemotherapeutic treatments on gut microbial community composition were dependent on the initial source of the founding microbial community. Influences of microbiota colonization during early ontogenetic stages and the resilience of gut microbiota to topical chemotherapeutic treatments are discussed. Full article
(This article belongs to the Special Issue Gut Microorganisms of Aquatic Animals 2.0)
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13 pages, 1674 KB  
Article
Advancing Wildlife Policy of Eastern Timber Wolves and Lake Sturgeon through Traditional Ecological Knowledge
by Hannah L. Schley, Ilene F. West and Christopher K. Williams
Sustainability 2022, 14(7), 3859; https://doi.org/10.3390/su14073859 - 24 Mar 2022
Cited by 6 | Viewed by 5445
Abstract
Traditional Ecological Knowledge (TEK) is becoming more prominent in wildlife management decisions and policy making. The cooperation of TEK and Western science paradigms have been beneficial for conserving our natural resources and wildlife populations. However, there are still concerns with accepting TEK as [...] Read more.
Traditional Ecological Knowledge (TEK) is becoming more prominent in wildlife management decisions and policy making. The cooperation of TEK and Western science paradigms have been beneficial for conserving our natural resources and wildlife populations. However, there are still concerns with accepting TEK as part of wildlife management, policy, and regulations. With increasing challenges to wildlife conservation, it is vital to implement Indigenous TEK to form more robust and holistic approaches to wildlife management. Here, we present two case studies in the upper Midwest region of the United States involving the Ojibwe tribe that show the importance of TEK collaboration and how that knowledge can be used for the betterment of ecologically sensitive species—lake sturgeon and eastern timber wolves. Full article
(This article belongs to the Special Issue Sustainable Conservation Planning and Wildlife Management)
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