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Keywords = induced polyploidy

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26 pages, 17214 KiB  
Article
Polyploid Induction Enhances Secondary Metabolite Biosynthesis in Clausena lansium: Morphological and Metabolomic Insights
by Yu Ding, Liangfang Wu, Hongyao Wei, Zhichun Zhang, Jietang Zhao, Guibing Hu, Yonghua Qin and Zhike Zhang
Agriculture 2025, 15(14), 1566; https://doi.org/10.3390/agriculture15141566 - 21 Jul 2025
Viewed by 354
Abstract
Polyploidy in plants can enhance stress resistance and secondary metabolite production, offering potential benefits for Clausena lansium (L.) Skeel, a medicinally valuable species. However, systematic studies of polyploidy-induced morphological, anatomical, and metabolic changes in this species are lacking. This study aimed to induce [...] Read more.
Polyploidy in plants can enhance stress resistance and secondary metabolite production, offering potential benefits for Clausena lansium (L.) Skeel, a medicinally valuable species. However, systematic studies of polyploidy-induced morphological, anatomical, and metabolic changes in this species are lacking. This study aimed to induce and characterize polyploid C. lansium lines, assess ploidy-dependent variations, and evaluate their impact on bioactive metabolite accumulation. Three cultivars were hybridized, treated with colchicine, and bred, yielding 13 stable polyploid lines confirmed by flow cytometry and chromosome counting. The polyploids exhibited distinct traits, including larger pollen grains, altered leaf margins, increased leaflet numbers, enlarged guard cells with reduced stomatal density, and thicker leaf tissues. Metabolomic analysis revealed that tetraploids accumulated significantly higher levels of flavonoids, alkaloids, and phenolic acids compared to diploids, while triploids showed moderate increases. These findings demonstrate that polyploidization, particularly tetraploidy, enhances C. lansium’s medicinal potential by boosting pharmacologically active compounds. The study expands germplasm resources and supports the development of high-quality cultivars for pharmaceutical applications. Full article
(This article belongs to the Special Issue Fruit Germplasm Resource Conservation and Breeding)
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24 pages, 2374 KiB  
Review
The Role of Colchicine in Plant Breeding
by Baljinder Singh, Sunyoung Yun, Yeji Gil and Myoung-Hwan Park
Int. J. Mol. Sci. 2025, 26(14), 6743; https://doi.org/10.3390/ijms26146743 - 14 Jul 2025
Viewed by 362
Abstract
Colchicine, a strong antimitotic drug produced by the crocus Colchicum autumnale, induces polyploidy by interfering with spindle formation during mitosis, making it a crucial tool in plant breeding. In this review, we give a comprehensive overview of the function of colchicine in [...] Read more.
Colchicine, a strong antimitotic drug produced by the crocus Colchicum autumnale, induces polyploidy by interfering with spindle formation during mitosis, making it a crucial tool in plant breeding. In this review, we give a comprehensive overview of the function of colchicine in plant enhancement, emphasizing its modes of action, application techniques, and effects on phytochemistry, physiology, and plant morphology. A wide variety of plant species, especially medicinal plants, have been studied in this context, utilizing in vitro, ex vitro, and in vivo methods for applying colchicine. In addition, we discuss the safety and effectiveness of colchicine in comparison to other polyploidy-inducing drugs, including oryzalin, trifluralin, and mutagens such as ethyl methanesulfonate and methyl methanesulfonate. Furthermore, the effects of colchicine on genetic stability and secondary metabolite production are discussed, with a focus on its usefulness in boosting the medicinal and economic potential of the target species. This synthesis highlights the ongoing use of colchicine in plant breeding and provides useful information and suggestions for future advancements in crop development via induced polyploidy. Full article
(This article belongs to the Special Issue New Insights in Plant Cell Biology)
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32 pages, 13931 KiB  
Article
Alisertib and Barasertib Induce Cell Cycle Arrest and Mitochondria-Related Cell Death in Multiple Myeloma with Enhanced Efficacy Through Sequential Combination with BH3-Mimetics and Panobinostat
by Andrea Benedi, Manuel Beltrán-Visiedo, Nelia Jiménez-Alduán, Alfonso Serrano-Del Valle, Alberto Anel, Javier Naval and Isabel Marzo
Cancers 2025, 17(14), 2290; https://doi.org/10.3390/cancers17142290 - 9 Jul 2025
Viewed by 578
Abstract
Background: The treatment landscape for multiple myeloma (MM) has significantly evolved in recent decades with novel therapies like proteasome inhibitors, immunomodulatory drugs and monoclonal antibodies. However, MM remains incurable, necessitating new pharmacological strategies. Mitotic kinases, such as Aurora proteins, have emerged as potential [...] Read more.
Background: The treatment landscape for multiple myeloma (MM) has significantly evolved in recent decades with novel therapies like proteasome inhibitors, immunomodulatory drugs and monoclonal antibodies. However, MM remains incurable, necessitating new pharmacological strategies. Mitotic kinases, such as Aurora proteins, have emerged as potential targets. Selective inhibitors of Aurora A and B,- alisertib (MLN8237) and barasertib (AZD1152), respectively, have shown anti-myeloma activity in preclinical studies, with alisertib demonstrating modest efficacy in early clinical trials. Methods and Results: This study investigated the mechanisms of action of alisertib and barasertib and their combination with antitumor agents in a panel of five MM cells lines. Both drugs induced cell cycle arrest phase and abnormal nuclear morphologies. Alisertib caused prolonged mitotic arrest, whereas barasertib induced transient arrest, both resulting in the activation of mitotic catastrophe. These findings revealed three potential outcomes: cell death, senescence, or polyploidy. High mitochondrial reactive oxygen species (mROS) were identified as possible drivers of cell death. Caspase inhibition reduced caspase-3 activation but did not prevent cell death. Interestingly, alisertib at low doses remained toxic to Bax/BakDKO cells, although mitochondrial potential disruption and cytochrome c release were observed. Sequential combinations of high-dose Aurora kinase inhibitors with BH3-mimetics, and in specific cases with panobinostat, showed a synergistic effect. Conversely, the simultaneous combination of alisertib and barasertib showed mostly antagonistic effects. Conclusions: Alisertib and barasertib emerge as potential in vitro candidates against MM, although further studies are needed to validate their efficacy and to find the best combinations with other molecules. Full article
(This article belongs to the Special Issue Advances in Molecular Oncology and Therapeutics)
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12 pages, 3949 KiB  
Article
Genome-Wide Identification and Evolutionary Analysis of the SnRK2 Gene Family in Nicotiana Species
by Yu Tang, Yangxin Zhang, Zhengrong Hu, Xuebing Yan, Risheng Hu and Jibiao Fan
Agriculture 2025, 15(13), 1396; https://doi.org/10.3390/agriculture15131396 - 29 Jun 2025
Viewed by 326
Abstract
Soil salinization threatens agriculture by inducing osmotic stress, ion toxicity, and oxidative damage. SnRK2 genes are involved in plant stress responses, but their roles in salt stress response regulation of tobacco remain unclear. Through genome-wide analysis, we identified 54 SnRK2 genes across four [...] Read more.
Soil salinization threatens agriculture by inducing osmotic stress, ion toxicity, and oxidative damage. SnRK2 genes are involved in plant stress responses, but their roles in salt stress response regulation of tobacco remain unclear. Through genome-wide analysis, we identified 54 SnRK2 genes across four Nicotiana species (N. tabacum, N. benthamiana, N. sylvestris, and N. tomentosiformis). Phylogenetic reconstruction clustered these genes into five divergent groups, revealing lineage-specific expansion in diploid progenitors (N. tomentosiformis) versus polyploidy-driven gene loss in N. tabacum. In silico promoter analysis uncovered regulatory networks involving light, hormones, stress, and developmental signals, with prevalent ABA-responsive elements (ABREs) supporting conserved stress-adaptive roles. Structural analysis highlighted functional diversification through variations in intron–exon architecture and conserved kinase motifs. This study provides a genomic atlas of SnRK2 evolution in Nicotiana, offering a foundation for engineering salt-tolerant crops. Full article
(This article belongs to the Section Crop Genetics, Genomics and Breeding)
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13 pages, 1975 KiB  
Article
Leaf Organogenesis Improves Recovery of Solid Polyploid Shoots from Chimeric Southern Highbush Blueberry
by Emily Walter, Akshaya Biswal, Peggy Ozias-Akins and Ye Chu
BioTech 2025, 14(2), 48; https://doi.org/10.3390/biotech14020048 - 12 Jun 2025
Viewed by 628
Abstract
Interspecific and intersectional crosses have introduced valuable genetic traits for blueberry (Vaccinium sect. Cyanococcus) cultivar improvement. Introgression from Vaccinium species at the diploid, tetraploid, and hexaploid levels has been found in cultivated blueberries. Continued efforts to integrate wild blueberry genetic resources [...] Read more.
Interspecific and intersectional crosses have introduced valuable genetic traits for blueberry (Vaccinium sect. Cyanococcus) cultivar improvement. Introgression from Vaccinium species at the diploid, tetraploid, and hexaploid levels has been found in cultivated blueberries. Continued efforts to integrate wild blueberry genetic resources into blueberry breeding are essential to broaden the genetic diversity of cultivated blueberries. However, performing heteroploid crosses among Vaccinium species is challenging. Polyploid induction through tissue culture has been useful in bridging ploidy barriers. Mixoploid or chimeric shoots often are produced, along with solid polyploid mutants. These chimeras are mostly discarded because of their genome instability and the difficulty in identifying periclinal mutants carrying germline mutations. Since induced polyploidy in blueberries often results in a low frequency of solid mutant lines, it is important to recover solid polyploids through chimera dissociation. In this study, two vegetative propagation methods, i.e., axillary and adventitious shoot induction, were evaluated for their efficiency in chimera dissociation. Significantly higher rates of chimera dissociation were found in adventitious shoot induction compared to axillary shoot induction. Approximately 89% and 82% of the adventitious shoots induced from mixoploid lines 145.11 and 169.40 were solid polyploids, respectively, whereas only 25% and 53% of solid polyploids were recovered through axillary shoot induction in these lines. Effective chimera dissociation provides useful and stable genetic materials to enhance blueberry breeding. Full article
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19 pages, 5589 KiB  
Article
Identification and Morphophysiological Characterization of Oryzalin-Induced Polyploids and Variants in Lysimachia xiangxiensis
by Yuanshan Zhang, Guanqun Chen, Ruixue Shen, Qiujing Li and Xiaohui Shen
Horticulturae 2025, 11(6), 654; https://doi.org/10.3390/horticulturae11060654 - 9 Jun 2025
Viewed by 339
Abstract
This study investigated the effects of oryzalin treatments on the induction of polyploids and variants, as well as their subsequent morphological and physiological characteristics, in Lysimachia xiangxiensis, a perennial herbaceous plant belonging to the Primulaceae family that is known for its ornamental value. [...] Read more.
This study investigated the effects of oryzalin treatments on the induction of polyploids and variants, as well as their subsequent morphological and physiological characteristics, in Lysimachia xiangxiensis, a perennial herbaceous plant belonging to the Primulaceae family that is known for its ornamental value. A total of 52 of the 162 treated stem segments survived after treatments and further developed into plantlets, and significant morphological changes in leaf color and growth status were observed. Using flow cytometry and chromosome counting, plants are categorized into the three variant types (VT1, VT2, and VT3), that is, VT1 and VT2 were diploid aneuploids, while VT3 was triploid. The optimized polyploid induction scheme involved treatment with 0.001% oryzalin for 4 days, resulting in an induction rate of up to 100%. Higher concentrations and longer exposure durations resulted in lower survival and polyploid induction rates of all stem segments during the above-mentioned processing. Observation of morphological features indicated that triploid VT3 vines were longer, with larger and thicker leaves and more guard cells, but lower stomatal density, compared with diploid aneuploids or the wild type. Polyploids outperformed other types in terms of chlorophyll content, net photosynthesis rate, stomatal conductance, and intercellular CO2 concentration, but had a lower flavonoid content. The results demonstrate that oryzalin can effectively induce polyploidy and variants in L. xiangxiensis, resulting in beneficial changes in morphology and physiological characteristics; this should provide valuable insight into the improvement of excellent varieties in plants. Full article
(This article belongs to the Section Propagation and Seeds)
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14 pages, 5415 KiB  
Article
Tetraploidization Altered Phenotypic Traits and Metabolite Profile of Java Ginseng (Talinum paniculatum (Jacq.) Gaertn.)
by Yingying Liu, Xiao Huang, Xinsheng Gao, Xiaofei Zhang, Huasun Huang, Weiguo Li and Yuanyuan Zhang
Plants 2025, 14(3), 480; https://doi.org/10.3390/plants14030480 - 6 Feb 2025
Viewed by 1052
Abstract
Polyploidization is a beneficial technique for enhancing the biomass of and secondary metabolite concentrations in plants. Java ginseng (Talinum paniculatum (Jacq.) Gaertn.) can be used as an alternative source of nutrition and has both ornamental and medicinal value. To improve the biomass [...] Read more.
Polyploidization is a beneficial technique for enhancing the biomass of and secondary metabolite concentrations in plants. Java ginseng (Talinum paniculatum (Jacq.) Gaertn.) can be used as an alternative source of nutrition and has both ornamental and medicinal value. To improve the biomass and content of medicinal ingredients, this study established an in vitro system that was used to induce polyploidy of java ginseng. Tetraploids were successfully produced by exposing the axillary buds to colchicine. The most favorable medium for inducing polyploidy was Murashige and Skoog medium devoid of hormonal substances, while immersing stem segments in a solution of 1–3 mg/mL colchicine for 48 h could achieve tetraploidy induction with a maximum rate of 18.03%. Tetraploids were distinguished from diploids by flow cytometry, with the tetraploids exhibiting darker and thicker leaves, bigger fruit and pollen, and larger stomata but lower stomatal density, while the aboveground biomass yield was reduced significantly compared with that of the diploids. Tetraploidization also altered the metabolite profile, with 22 metabolite concentrations being significantly increased (p < 0.05) and 74 metabolite concentrations being significantly decreased (p < 0.05) in the leaves of the tetraploids. The autotetraploid produced in this study could provide novel insights into artificial polyploid breeding and could be utilized as a germplasm to generate new polyploids. Full article
(This article belongs to the Special Issue Horticultural Plant Physiology and Molecular Biology)
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14 pages, 1321 KiB  
Article
Effect of Induced Polyploidy on Morphology, Antioxidant Activity, and Dissolved Sugars in Allium cepa L.
by Mujahid Ado Abubakar, Novitskaya Elena Gennadievna, Son Oksana Mikhailovna and Kim Ekaterina Mikhailovna
Horticulturae 2025, 11(2), 154; https://doi.org/10.3390/horticulturae11020154 - 2 Feb 2025
Cited by 1 | Viewed by 1261
Abstract
The role of onion as the second most-consumed and cultivated vegetable around the world and its renowned qualities that lead it to be called the “queen of the kitchen” have positioned it as a vital source of nutritional and economic contributions around the [...] Read more.
The role of onion as the second most-consumed and cultivated vegetable around the world and its renowned qualities that lead it to be called the “queen of the kitchen” have positioned it as a vital source of nutritional and economic contributions around the world. Polyploidy serves as a groundbreaking innovation in plant breeding, improving the yield and vigor of plants. This study was conducted to determine the effects of applying different concentrations of colchicine to onion seedlings on their morphology, antioxidant activity, and dissolved sugars. The mutagen was applied to the onion seeds at three different concentrations (0.05, 0.1, and 0.2% w/v) for an exposure period of 24 h. A chromosomal analysis confirmed the induction of polyploidy, which led to the successful duplication of the chromosome number from diploid (2n = 16) to tetraploid (4n = 32). The control recorded a survival rate of 91.57%, while 83.33%, 3.33%, and 0.00% survival rates were recorded for seedlings treated with 0.05%, 0.1%, and 0.2% (w/v) concentrations of colchicine, respectively. Furthermore, the tetraploids showed significant differences in morphology, producing the tallest seedlings (reaching up to 73.6 cm tall) and the greatest average bulb diameter (of 5.64 cm) after 14 weeks. The tetraploids also showed significant differences in antioxidant activity and the amount of dissolved sugars, recording the highest DPPH scavenging percentage of 72.58% and refractive index of 1.369. Successful induction of polyploidy was achieved with the application of 0.05% (w/v) colchicine, which produced tetraploids that are morphologically and biochemically superior to other treated and control plants at a significance level of p < 0.05. Full article
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20 pages, 5051 KiB  
Article
Identification and Evaluation of Diploid and Tetraploid Passiflora edulis Sims
by Xin Su, Xue Wang, Ruilian Li, Chiyu Zhou, Lin Chen, Shi Chen, Nianhui Cai and Yulan Xu
Plants 2024, 13(18), 2603; https://doi.org/10.3390/plants13182603 - 18 Sep 2024
Cited by 2 | Viewed by 1315
Abstract
Passiflora edulis Sims (2n = 18) is a perennial plant with high utilization values, but its spontaneous polyploidy in nature has yet to be seen. Thus, this study aims to enhance our understanding of polyploidy P. edulis and provide rudimentary knowledge for breeding [...] Read more.
Passiflora edulis Sims (2n = 18) is a perennial plant with high utilization values, but its spontaneous polyploidy in nature has yet to be seen. Thus, this study aims to enhance our understanding of polyploidy P. edulis and provide rudimentary knowledge for breeding new cultivars. In this study, colchicine-induced tetraploid P. edulis (2n = 36) was used as experimental material (T1, T2, and T3) to explore the variances between it and its diploid counterpart in morphology, physiology, and biochemical characteristics, and a comparison of their performance under cold stress was conducted. We measured and collected data on phenotype parameters, chlorophyll contents, chlorophyll fluorescence, photosynthesis, osmotic substances, and antioxidant enzymes. The results showed that tetraploid P. edulis exhibited a shorter phenotype, more giant leaves, darker leaf color, and longer and fewer roots. Moreover, the physiological and biochemical analysis indicated that the tetraploid P. edulis had better photosynthesis systems and higher chlorophyll fluorescence parameters than the diploid P. edulis. Additionally, the tetraploid P. edulis had higher activity of antioxidant enzymes (SOD, POD, CAT) and lower MDA content to maintain better resistance in low temperatures. Overall, we conclude that there were apparent differences in the morphological, physiological, and biochemical traits of the tetraploid and diploid P. edulis. The tetraploid plants showed better photosynthesis systems, higher osmotic substance content, and antioxidant enzyme activity than the diploid, even under cold stress. Our results suggest that tetraploids with more abundant phenotype variation and better physiological and biochemical traits may be used as a new genetic germplasm resource for producing new P. edulis cultivars. Full article
(This article belongs to the Special Issue Adaptive Mechanisms of Plants to Biotic or Abiotic Stresses)
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20 pages, 9576 KiB  
Article
Genome-Wide Identification and Expression Analysis of ADK Gene Family Members in Cotton under Abiotic Stress
by Peijun Huang, Ziwei Lin, Yuzhi Zhang, Yu Gao, Songjuan Tan, Shuai Wang, Xiaoyu Cao, Hongyan Shi, Chao Sun, Jiangping Bai and Xiongfeng Ma
Int. J. Mol. Sci. 2024, 25(14), 7821; https://doi.org/10.3390/ijms25147821 - 17 Jul 2024
Cited by 2 | Viewed by 1569
Abstract
Adenosine kinase (ADK) is a key enzyme widely distributed in plants, playing an important role in maintaining cellular energy homeostasis and regulating plant growth, development, and responses to environmental stresses. However, research on ADK genes in cotton (Gossypium hirsutum), an economically [...] Read more.
Adenosine kinase (ADK) is a key enzyme widely distributed in plants, playing an important role in maintaining cellular energy homeostasis and regulating plant growth, development, and responses to environmental stresses. However, research on ADK genes in cotton (Gossypium hirsutum), an economically significant crop, has been limited. This study identified 92 ADK genes from four cotton species (G. arboreum, G. raimondii, G. hirsutum, and G. barbadense) using HMMER and Local BLASTP methods and classified them into six groups. Chromosomal localization revealed a random distribution of ADK genes in G. hirsutum, with 13 genes located on the At subgenome and 14 genes on the Dt subgenome. Gene structure analysis showed consistency in exon–intron organization within subgroups, while conserved motif analysis identified subgroup-specific motifs, indicating functional diversity. Synteny and collinearity mapping analysis revealed that the primary expansion mechanisms of the ADK gene family in cotton are polyploidy and segmental duplication. Cis-regulatory elements in GhADK promoters were classified into light response, hormone response, developmental regulation, and stress response. We also analyzed the expression patterns of GhADK genes under a low temperature (4 °C) and drought conditions. Most GhADK genes responded to cold stress with different expression patterns, indicating their roles in rapid response and long-term cold adaptation. Under drought stress, expression patterns varied, with some genes showing sustained high expression levels. The qRT-PCR validation of transcriptomic data confirmed the stress-induced expression patterns of selected GhADK genes. Functional analysis through the VIGS silencing of GhADK25 demonstrated its importance in cold and drought stress responses, with silencing resulting in poor growth under stress, highlighting its significance in stress tolerance. This study provides a basis for further understanding the evolutionary relationships and functions of the cotton ADK gene family. Full article
(This article belongs to the Section Molecular Plant Sciences)
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27 pages, 15618 KiB  
Article
Polyploidy Promotes Hypertranscription, Apoptosis Resistance, and Ciliogenesis in Cancer Cells and Mesenchymal Stem Cells of Various Origins: Comparative Transcriptome In Silico Study
by Olga V. Anatskaya and Alexander E. Vinogradov
Int. J. Mol. Sci. 2024, 25(8), 4185; https://doi.org/10.3390/ijms25084185 - 10 Apr 2024
Cited by 2 | Viewed by 4389
Abstract
Mesenchymal stem cells (MSC) attract an increasing amount of attention due to their unique therapeutic properties. Yet, MSC can undergo undesirable genetic and epigenetic changes during their propagation in vitro. In this study, we investigated whether polyploidy can compromise MSC oncological safety and [...] Read more.
Mesenchymal stem cells (MSC) attract an increasing amount of attention due to their unique therapeutic properties. Yet, MSC can undergo undesirable genetic and epigenetic changes during their propagation in vitro. In this study, we investigated whether polyploidy can compromise MSC oncological safety and therapeutic properties. For this purpose, we compared the impact of polyploidy on the transcriptome of cancer cells and MSC of various origins (bone marrow, placenta, and heart). First, we identified genes that are consistently ploidy-induced or ploidy-repressed through all comparisons. Then, we selected the master regulators using the protein interaction enrichment analysis (PIEA). The obtained ploidy-related gene signatures were verified using the data gained from polyploid and diploid populations of early cardiomyocytes (CARD) originating from iPSC. The multistep bioinformatic analysis applied to the cancer cells, MSC, and CARD indicated that polyploidy plays a pivotal role in driving the cell into hypertranscription. It was evident from the upregulation of gene modules implicated in housekeeping functions, stemness, unicellularity, DNA repair, and chromatin opening by means of histone acetylation operating via DNA damage associated with the NUA4/TIP60 complex. These features were complemented by the activation of the pathways implicated in centrosome maintenance and ciliogenesis and by the impairment of the pathways related to apoptosis, the circadian clock, and immunity. Overall, our findings suggest that, although polyploidy does not induce oncologic transformation of MSC, it might compromise their therapeutic properties because of global epigenetic changes and alterations in fundamental biological processes. The obtained results can contribute to the development and implementation of approaches enhancing the therapeutic properties of MSC by removing polyploid cells from the cell population. Full article
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24 pages, 3405 KiB  
Article
In Vitro Characterization of Reversine-Treated Gingival Fibroblasts and Their Safety Evaluation after In Vivo Transplantation
by Carlos Miguel Marto, Mafalda Laranjo, Ana Cristina Gonçalves, Anabela Paula, Joana Jorge, Rui Caetano-Oliveira, Maria Inês Sousa, Bárbara Oliveiros, João Ramalho-Santos, Ana Bela Sarmento-Ribeiro, Manuel Marques-Ferreira, António Cabrita, Maria Filomena Botelho and Eunice Carrilho
Pharmaceutics 2024, 16(2), 207; https://doi.org/10.3390/pharmaceutics16020207 - 31 Jan 2024
Cited by 1 | Viewed by 2660
Abstract
Reversine is a purine derivative that has been investigated with regard to its biological effects, such as its anticancer properties and, mostly, its ability to induce the dedifferentiation of adult cells, increasing their plasticity. The obtained dedifferentiated cells have a high potential for [...] Read more.
Reversine is a purine derivative that has been investigated with regard to its biological effects, such as its anticancer properties and, mostly, its ability to induce the dedifferentiation of adult cells, increasing their plasticity. The obtained dedifferentiated cells have a high potential for use in regenerative procedures, such as regenerative dentistry (RD). Instead of replacing the lost or damaged oral tissues with synthetic materials, RD uses stem cells combined with matrices and an appropriate microenvironment to achieve tissue regeneration. However, the currently available stem cell sources present limitations, thus restricting the potential of RD. Based on this problem, new sources of stem cells are fundamental. This work aims to characterize mouse gingival fibroblasts (GFs) after dedifferentiation with reversine. Different administration protocols were tested, and the cells obtained were evaluated regarding their cell metabolism, protein and DNA contents, cell cycle changes, morphology, cell death, genotoxicity, and acquisition of stem cell characteristics. Additionally, their teratoma potential was evaluated after in vivo transplantation. Reversine caused toxicity at higher concentrations, with decreased cell metabolic activity and protein content. The cells obtained displayed polyploidy, a cycle arrest in the G2/M phase, and showed an enlarged size. Additionally, apoptosis and genotoxicity were found at higher reversine concentrations. A subpopulation of the GFs possessed stem properties, as supported by the increased expression of CD90, CD105, and TERT, the existence of a CD106+ population, and their trilineage differentiation capacity. The dedifferentiated cells did not induce teratoma formation. The extensive characterization performed shows that significant functional, morphological, and genetic changes occur during the dedifferentiation process. The dedifferentiated cells have some stem-like characteristics, which are of interest for RD. Full article
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9 pages, 945 KiB  
Communication
Naturally Occurring Triploidy in Cannabis
by Richard Philbrook, Marzieh Jafari, Sydney Gerstenberg, Krista L. Say, Jeremy Warren and Andrew Maxwell Phineas Jones
Plants 2023, 12(23), 3927; https://doi.org/10.3390/plants12233927 - 22 Nov 2023
Cited by 5 | Viewed by 5241
Abstract
Polyploidy is a significant evolutionary process in plants that involves the duplication of genomic content and has been recognized as a key mechanism driving plant diversification and adaptation. In natural populations, polyploids frequently arise from unreduced gametes, which subsequently fuse with reduced or [...] Read more.
Polyploidy is a significant evolutionary process in plants that involves the duplication of genomic content and has been recognized as a key mechanism driving plant diversification and adaptation. In natural populations, polyploids frequently arise from unreduced gametes, which subsequently fuse with reduced or unreduced gametes, resulting in triploid or tetraploid offspring, respectively. Cannabis sativa L. is a diploid species, but recent work using artificially induced polyploidy has demonstrated its potential advantages in an agricultural setting. Further, recent work has identified that some elite clonal cultivars, vis. Mac1, are triploid, with no indication that they were artificially produced. The current study was conducted to determine if polyploidy is a naturally occurring phenomenon in cannabis and to estimate the frequency of this phenomenon across populations. To do this, the presence of natural triploid individuals was evaluated in 13 seedling populations of cannabis using a flow cytometry analysis. Among the examined populations, natural triploids were identified in 10 groups with an average frequency of approximately 0.5%. The highest frequency of natural triploids was observed in a self-pollinated population at 2.3%. This research demonstrates that polyploidy is a naturally occurring event in cannabis and triploids are present at an average of approximately 0.5%, or 1 in 200 plants. These data shed light on the natural variation in ploidy within cannabis populations and contribute valuable insights to the understanding of cannabis genetics and breeding practices. Full article
(This article belongs to the Special Issue Cannabis sativa: Advances in Biology and Cultivation)
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18 pages, 2747 KiB  
Article
Multi-Omics Analysis of Gene and microRNA Expression in Diploid and Autotetraploid Poplar under Drought Stress by Transcriptome, microRNA, and Degradome Sequencing
by Qiang Han, Kang Du, Yufei Xia and Xiangyang Kang
Forests 2023, 14(11), 2268; https://doi.org/10.3390/f14112268 - 19 Nov 2023
Viewed by 1773
Abstract
Drought-induced forest death has become a global phenomenon, which is hindering the development of sustainable forestry. Polyploidy breeding has been considered as an effective method of genetic improvement for tree stress resistance. However, the response mechanisms of tetraploid poplars to drought stress are [...] Read more.
Drought-induced forest death has become a global phenomenon, which is hindering the development of sustainable forestry. Polyploidy breeding has been considered as an effective method of genetic improvement for tree stress resistance. However, the response mechanisms of tetraploid poplars to drought stress are unclear. In this study, based on high-throughput sequencing of transcriptome, small RNA, and degradome for these samples, which selected three genotypes of tetraploid poplars and their counterpart diploids for drought stress and rewatering trial in the experiment, we performed multi-omics analyses to investigate the distinction in drought resistance between tetraploid and diploid. A total of 3391 differentially expressed genes (DEGs) were found from the Dro-Di vs. CK-Di, 3753 DEGs from the Re-Di vs. Dro-Di, 3857 DEGs from the Dro-Te vs. CK-Te, and 4177 DEGs from the Re-Te vs. Dro-Te. Of the above DEGs, 1646 common-DEGs were identified significantly related to drought-stress response, 2034 common-DEGs related to rewater response, 158 and 114 common-DEGs showed opposite expression patterns between diploid and tetraploid, implying that these DEGs might play important roles in response to drought stress as a result of differences in ploidy. Additionally, 586 known miRNAs and 72 novel miRNAs were identified through analysis of 18 small RNA libraries, among which eight common-miRNAs were significantly related to drought-stress response, and four were related to rewater response. The degradome sequencing analysis revealed that 154 target transcripts for 24 drought-stress-associated differentially expressed miRNAs (DEmiRs), and 90 for 12 rewatering-associated DEmiRs were identified in the tetraploid based on both degradome and TargetFinder analyses. These findings provide valuable information for further functional characterization of genes and miRNAs in response to drought stress in Populus polyploidy, and potentially contribute to drought-resistant breeding of polypoid in the future. Full article
(This article belongs to the Special Issue Abiotic Stress in Tree Species)
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24 pages, 11206 KiB  
Article
Paclitaxel and Caffeine–Taurine, New Colchicine Alternatives for Chromosomes Doubling in Maize Haploid Breeding
by Saeed Arshad, Mengli Wei, Qurban Ali, Ghulam Mustafa, Zhengqiang Ma and Yuanxin Yan
Int. J. Mol. Sci. 2023, 24(19), 14659; https://doi.org/10.3390/ijms241914659 - 28 Sep 2023
Cited by 5 | Viewed by 2559
Abstract
The doubled haploid (DH) technology is employed worldwide in various crop-breeding programs, especially maize. Still, restoring tassel fertility is measured as one of the major restrictive factors in producing DH lines. Colchicine, nitrous oxide, oryzalin, and amiprophosmethyl are common chromosome-doubling agents that aid [...] Read more.
The doubled haploid (DH) technology is employed worldwide in various crop-breeding programs, especially maize. Still, restoring tassel fertility is measured as one of the major restrictive factors in producing DH lines. Colchicine, nitrous oxide, oryzalin, and amiprophosmethyl are common chromosome-doubling agents that aid in developing viable diploids (2n) from sterile haploids (n). Although colchicine is the most widely used polyploidy-inducing agent, it is highly toxic to mammals and plants. Therefore, there is a dire need to explore natural, non-toxic, or low-toxic cheaper and accessible substitutes with a higher survival and fertility rate. To the best of our knowledge, the advanced usage of human anticancer drugs “Paclitaxel (PTX)” and “Caffeine–Taurine (CAF–T)” for in vivo maize haploids doubling is being disclosed for the first time. These two antimitotic and antimicrotubular agents (PTX and CAF–T) were assessed under various treatment conditions compared to colchicine. As a result, the maximum actual doubling rates (ADR) for PTX versus colchicine in maize haploid seedlings were 42.1% (400 M, 16 h treatment) versus 31.9% (0.5 mM, 24 h treatment), respectively. In addition, the ADR in maize haploid seeds were CAF–T 20.0% (caffeine 2 g/L + taurine 12 g/L, 16 h), PTX 19.9% (100 μM, 24 h treatment), and colchicine 26.0% (2.0 mM, 8 h treatment). Moreover, the morphological and physiological by-effects in haploid plants by PTX were significantly lower than colchicine. Hence, PTX and CAF–T are better alternatives than the widely used traditional colchicine to improve chromosome-doubling in maize crop. Full article
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