Search Results (83)

We clarified the effect of wheat straw return combined with microbial agents on rice yield and soil properties. A field experiment was conducted using hybrid indica rice ‘Chuankangyou 2115’ and five treatments: no wheat straw return (T₁), wheat straw return alone (T₂), T₂+ microbial agent application (Bacillus subtilis/Trichoderma harzianum = 1:1) (T₃); T₂+ microbial agent application (Bacillus subtilis/Trichoderma harzianum = 3:1) (T₄); T₂+ microbial agent application (Bacillus subtilis/Trichoderma harzianum = 1:3) (T₅). T₂–T₅ significantly increased dry matter accumulation, soil total N, ammonium N, nitrate N, and organic matter, improving yield by 3.81–26.63%. T₃ exhibited the highest yield increases in two consecutive years. At the jointing and heading stages, Penicillium and Saitozyma dominated under T₃ and positively correlated with dry matter, yield, and nitrogen levels. Straw return combined with Bacillus subtilis and Trichoderma harzianum (20 g m⁻² each) enhanced soil nitrogen availability and dry matter accumulation and translocation. Our findings guide efficient straw utilization, soil microbial regulation, and sustainable high-yield rice production. Full article

This study investigated how nitrogen fertilizer management influences the yield and grain quality of two rice cultivars, Nanjing 9108 (a late-maturing medium japonica) and Ming 1 Youzhenzhan (a three-line indica hybrid). Three field experiments were conducted to assess different nitrogen application strategies, including total nitrogen reduction, panicle-stage nitrogen reduction, and substitution of chemical fertilizer with compound fertilizer. The experiments analyzed changes in rice nitrogen uptake and transport efficiency, yield and its components, and quality and its components under different nitrogen application treatments, and fitted a function based on the effect of total nitrogen fertilizer on quality. Taking into account four quality indicators and ensuring yield reduction is less than 30%, replacing 100% chemical fertilizer with compound fertilizer in Nanjing 9108 was the optimal strategy for significantly improving quality. Reducing panicle fertilizer by 50% or omitting it also significantly improved quality. Replacing chemical fertilizers with 50% compound fertilizer also maintained nutritional quality. Reducing total nitrogen fertilizer by 25% in Ming 1 Youzhenzhan was the optimal strategy for significantly enhancing quality. Replacing chemical fertilizer with 100% compound fertilizer significantly improved quality. Reducing panicle fertilizer by 50% and substituting 50% of chemical fertilizer with compound fertilizer also significantly improved quality. Taking into account the synergistic effects of nitrogen application measures on rice yield and quality, the performance of the two rice varieties is not identical. The results showed that nitrogen fertilizer management significantly affected both yield and quality, with responses varying between the two varieties. But the two varieties can ensure optimal quality under yield conditions by reducing panicle fertilizer application by 50% and replacing chemical fertilizers with compound fertilizers. Full article

Background/Objectives: To overcome the limitations imposed by bacterial blight on widely adopted indica–japonica hybrid rice, this study employed molecular design breeding strategies to develop a resistant germplasm. Methods: Through conventional backcross breeding combined with molecular-marker-assisted selection, the Xa23-carrying material XR39 was hybridized with the wide-compatibility restorer line R5315 harboring the S5n gene. Progeny selection integrated evaluations of agronomic traits, disease resistance identification, and test-crossing with sterile lines. Results: Five wide-compatibility restorer lines simultaneously incorporating the Xa23 and S5n genes were successfully developed, demonstrating outstanding bacterial blight resistance and restoration ability. The selected hybrid combinations, A3/RP1, A1/RP4, and A4/RP4, exhibited yield increases of 2.6–8.6% compared to the control. Conclusions: This study not only established a novel germplasm for developing bacterial blight-resistant indica–japonica hybrid rice varieties, but also established a model for gene design breeding for rice improvement. Full article

Screening and breeding more resistant heat stress restorer lines represent an effective approach to addressing the decline in hybrid rice seed production caused by heat stress (HS). However, the molecular mechanisms affecting the differences in the heat resistance of anthers under HS remain unclear. This study compared the gene expression patterns of two hybrid rice restorer lines with differing heat resistances under HS and discusses the mechanisms of the heat response in rice. Under heat stress, 247 DEGs were co-expressed across varieties and were involved in biological processes such as protein processing and carbon metabolism, with heat shock proteins being the most ubiquitous. Interestingly, a substantial enrichment of genes related to non-structural carbohydrates and ATP was observed among the unique DEGs in R996 and R4628. Simultaneously, the contents of non-structural carbohydrates and ATP levels in the young spikes of R996 were significantly higher than those in R4628. This suggests that starch, soluble sugars and ATP play significant roles in heat tolerance during the flowering stage of rice. Overall, this study provides novel insights into the molecular mechanisms underlying heat stress resistance in indica rice restorer lines and informs future strategies for the genetic improvement of heat tolerance in these varieties. Full article

In recent years, there has been widespread cultivation of high-quality rice along the southeast coast of China, particularly in Shanghai. However, the specific changes in the yield and quality performance of rice in the Shanghai region have not been well understood. A study conducted on 194 rice varieties in the Shanghai region from 1994 to 2023 focused on yield, growth characteristics, and quality. The findings revealed significant increases in rice yield (+16.8%) and spikelets per panicle (+45.4%) in the Shanghai region over the past 30 years, along with a decrease in amylose content (−27.9%). However, parameters such as grain filling, 1000-grain weight, plant height, panicle length, chalkiness, and gel consistency showed no significant changes over the same period. Additionally, the study found that the yield, nitrogen application amount, growth period, and head rice rate of japonica rice and indica-japonica hybrid rice were higher than those of indica rice, although the panicle length was lower in comparison. Japonica inbred rice exhibited the lowest amylose content and superior taste. Correlation analyses suggested that the breeding of japonica rice varieties in the Shanghai region should focus on balancing nitrogen absorption and high chalkiness, plant biomass, and amylose content, and yield and the appearance and taste quality of rice. In addition, the potential rice yield per unit area in the Shanghai region in the future depends on the promotion of hybrid japonica rice planting and developing best management practices. Full article

To increase the seed setting rate and yield of large-panicle rice varieties, one agronomic and breeding strategy is to increase the proportion of spikelets in the middle portion of the panicle as many of the lower spikelets fail to produce grains. Current nitrogen management during panicle development mainly focuses on fertilization at the emergence of the top fourth leaf, which increases the number of secondary branch spikelets on the lower part of the panicle. Two-year field experiments were conducted in 2021 and 2022 with two typical large-panicle hybrid indica rice cultivars, IIYM86 and JLY8612. Nitrogen was applied at the emergence of the top fifth (TL5), fourth (TL4), third (TL3), and second (TL2) leaves, with no nitrogen application as a control. This study aimed to investigate the effects of nitrogen application on the panicle structure, seed setting rate, and grain yield at different stages of panicle development. Nitrogen application at TL3 achieved the highest grain yield, followed by application at TL4, for both cultivars over the two years. TL3 did not significantly alter the number of spikelets per panicle but increased the proportion of spikelets located in the middle part of the panicle and reduced the proportions in the upper and lower parts compared to TL4. These effects were attributed to a significant increase in secondary branch spikelet differentiation in the middle part and a decrease in secondary branch spikelet differentiation in the upper and lower parts. Compared to TL4, TL3 significantly increased the seed setting rate by 9.46 and 9.48% and the grain yield by 6.86 and 8.92% in IIYM86 and JLY8612, respectively. In TL3, the significant increase in secondary branch spikelet differentiation in the middle part was primarily due to significantly reduced indole acetic acid (IAA) and an increased cytokinin/IAA ratio, which inhibited apical dominance. The significant decrease in secondary branch spikelet differentiation in the lower part of TL3 was mainly related to a significant increase in IAA and a reduction in the cytokinin/IAA ratio. Transcriptome analysis of young panicles confirmed these results, and differentially expressed genes between TL3 and TL4 were primarily enriched in plant hormone signal transduction related to IAA biosynthesis and degradation. These findings indicate that postponing nitrogen application until TL3 can improve the PTI and the seed setting rate by regulating hormonal balance, thereby optimizing nitrogen management during panicle development in large-panicle hybrid indica rice cultivars. Full article

Awn length is a significant agronomic trait in rice. To analyze the genetic mechanism of awn length in the chromosome segment substitution line 29 (CSSL29) derived from 9311 (recipient) into Nipponbare (NIP, donor), an F₂ segregated population was constructed from 9311 (indica) and CSSL29. The population and candidate genes were analyzed using quantitative trait loci sequencing (QTL-seq), yeast two-hybrid assays, and 3 k and 10 k rice population databases. The results indicated that the awn length in the F₂ segregating population followed a normal distribution, and the long-awn phenotype in CSSL29 was controlled by multiple genes. Through BSA sequencing data, a major QTL qAWN4 associated with rice awn length was identified on chromosome 4, containing the cloned gene An-2. Further investigation of the CSSL29 long-awn substitution segment revealed the presence of the awn length gene An-1, with both genes exhibiting an additive effect on the regulation of the long-awn phenotype. Yeast two-hybrid experiments confirmed no interaction between An-2 and An-1, suggesting that additive effect awn length regulation is not mediated through simple protein-to-protein binding. Population genetic analysis indicated that the An-2 allele was artificially selected during domestication but did not significantly differ between indica and japonica subspecies. These findings enhance our understanding of the genetic regulation of rice awn length and the domestication of long-awn rice, laying the groundwork for future research in this area. Full article

This study aimed to develop an aromatic thermosensitive genic male sterile (TGMS) line in indica rice using CRISPR/Cas9 technology. The TMS5 and FGR in the high-quality conventional rice variety Huahang 48 were targeted for editing using CRISPR/Cas9 technology. CRISPR/Cas9 vectors designed for TMS5 and FGR were constructed and introduced into rice calli through Agrobacterium-mediated transformation. Transgenic seedlings were subsequently regenerated, and the target sites of the edited plants were analyzed via sequencing. A total of fifteen T₀ double mutants were successfully obtained. Three mutants without T-DNA insertion were screened in the T₁ generation by the PCR detection of hygromycin gene fragments, and homozygous mutants without T-DNA insertion were screened in the T₂ generation by the sequencing analysis of the mutation sites, named Huahang 48s. Huahang 48s exhibited complete sterility at 24 °C and pollen transfer at 23 °C. The 2-acetyl-1-pyrroline (2-AP) content was detected in the young panicles, leaves, and stems of Huahang 48s. The leaves of Huahang 48s had the highest 2-AP content, contrasting with the absence of 2-AP in HuaHang 48. F₁ hybrids that crossed Huahang 48s with two high-quality restorer lines were superior to the two parents in terms of yield per plant and 1000-grain weight. Huahang 48s has a certain combining ability and application potential in two-line cross breeding. The successful application of CRISPR/Cas9 technology in Huahang 48 established a foundation for developing aromatic TGMS lines, providing both theoretical insights and practical materials for breeding efforts. Full article

Previous studies have shown that a one-time application of polymer-coated urea (PCU) can increase rice yield and nitrogen (N) uptake. However, the connection between rice root morphology and physiological traits and grain yield and N absorption has still not been well understood. The objective of this study was to explore whether one-time application of PCU could enhance shoot growth, improve plant physiological activity, and ultimately boost rice yield and NUE by optimizing root morphological and physiological traits. In this study, a super-large-panicle indica-japonica hybrid rice variety, Yongyou1540, was cultivated under three N treatments during 2022 and 2023: (1) 0N, throughout the entire growth period, no N fertilizer was applied; (2) LFP, local farmers’ N management practices were followed, using urea as the N source, and N fertilizer management was carried out according to the local farmers’ customary fertilization practices; and (3) PCU, a one-time application of PCU was performed at one day before transplanting. PCU is a controlled-release fertilizer in which urea granules are coated with a synthetic polymer layer; it has been widely used in rice cultivation. In both LFP and PCU treatments, N was applied at a rate of 200 kg N ha⁻¹. PCU is a type of controlled-release fertilizer in which urea granules are coated with a layer of synthetic polymer. Compared to LFP, PCU significantly improved several root morphological traits, including increased deep-root proportion and specific root length (SRL), throughout the entire growth period; increased root length and root length density at heading and maturity; and increased root biomass growth rate from jointing to heading and reduced reduction rate after heading. Additionally, PCU enhanced root oxidative activity (ROA) and increased zeatin and zeatin riboside (Z+ZR) content in both roots and root bleeding sap at the middle and late grain-filling stages. Furthermore, PCU markedly increased the flag-leaf net photosynthetic rate, Z+ZR content in leaves, and activities of key enzymes involved in sucrose-to-starch conversion in grains during the middle and late grain-filling stages. Correlation analysis indicated that root and shoot biomass growth rate showed a significant positive correlation before heading, and that root biomass reduction rate was significantly negatively correlated with shoot biomass growth rate after heading. ROA and Z+ZR content in both roots and root bleeding sap were significantly associated with flag-leaf photosynthetic rate, Z+ZR content in leaves, and the activities of key enzymes involved in the sucrose-to-starch conversion in grains. On average, PCU increased rice yield by 10.0% and agronomic NUE by 46.2%, compared to LFP. These findings suggest that PCU could optimize root morphological and physiological traits, and thereby promote shoot growth, enhance physiological activity, and ultimately increase both rice yield and NUE. Further research could also investigate the potential for combining PCU with other agronomic practices to enhance both rice yield and NUE. Full article

Despite the successful breeding of hybrid japonica rice by the new strategy (the female parent with a restorer line containing an appropriate proportion of indica rice genes) in China, it remains unclear whether these cultivars exhibit a similar yield performance with the traditional high-yield hybrid cultivars in the Yangtze River region. Therefore, two field experiments were conducted in Fenghua City and Yuyao City, China, during the two growing seasons in 2019 and 2020. Six japonica hybrid rice cultivars and one control indica–japonica hybrid rice cultivar (Yongyou1540 [YY1540]) were chosen as the experimental materials in each year, and the seedling quality, grain yield, and yield components were evaluated. The results showed that the grain yield of YY1540 was 13.9 t ha⁻¹ and 14.5 t ha⁻¹ in 2019 and 2020, respectively, which was the highest among all cultivars in both years. However, the japonica hybrid rice cultivars CHY83 in 2019 and CHY112 in 2020 also achieved high yield performance with 13.7 t ha⁻¹ and 14.0 t ha⁻¹, respectively, which were not significantly difference from YY1540. The japonica hybrid cultivars with a high grain yield typically exhibited more spikelets per panicle, more spikelets per m², and a higher harvest index than those with a lower grain yield. Increasing the total growth duration had a limited impact on the grain yield of japonica hybrid rice. However, the post-heading daily grain yield was significantly positively correlated with grain yield in japonica hybrid rice cultivars. Moreover, significant quadratic relationships were observed between plant height at maturity and grain yield and between seedling dry weight and grain yield. The optimal plant height at maturity and seedling dry weight for achieving a high grain yield in japonica hybrid rice were approximately 130 cm and 300 mg plant⁻¹, respectively. This study provides useful information for breeding high-yield japonica hybrid cultivars. Full article

With the development and improvement of indica–japonica hybrid rice breeding technologies, it has become possible to directly utilize the heterosis between indica and japonica subspecies to cultivate high-yielding rice varieties. Precisely analyzing the attributes and heterosis levels of indica–japonica varieties is crucial for successfully breeding indica–japonica hybrid rice and utilizing heterosis. This study employed 34 insertion–deletion (InDel) molecular markers to identify the indica–japonica attributes in 122 rice varieties and validated the results using cluster analyses and principal component analyses (PCAs). Additionally, the yield-related traits of the hybrids and parents were assessed, heterosis was analyzed, and the feasibility of predicting heterosis using parental genetic distance (GD) was explored. InDel molecular markers showed that all the hybrids were indica–japonica crosses with varying genetic components, confirmed by the cluster analyses and the PCAs. A heterosis analysis revealed that an increase in the effective panicle number per plant (EP) was the main factor in increasing the yield. Different GD intervals showed varying correlations with trait heterosis. These results indicate the effectiveness of InDel molecular markers in accurately distinguishing indica–japonica attributes and that hybrid combinations demonstrate significant heterosis. This study provides a reference for parent selection and utilizing heterosis in indica–japonica hybrid rice. Full article

Background: The differing floret opening times between subsp. indica and subsp. japonica in rice limit the potential for increased hybrid seed production. Objectives: To elucidate the physiological basis underlying the differences in floret opening time between indica and japonica rice. Materials: A comparative analysis involved nine indica and ten japonica rice varieties. Methods: Using paraffin sectioning, transcriptome sequencing, RT-PCR, and endogenous substance quantification, we investigated the structural variations in floral organs, the differences in the initiation timing of floret opening regulatory pathways, and endogenous regulators. Results: The results indicated insignificant differences in lemma thickness, lodicule thickness, lodicule area, and the coupling-lodicule length between indica and japonica rice. However, japonica rice exhibited larger lodicule-lemma gaps and more vascular bundles compared to indica rice. Within the 9:00 a.m. to 10:00 a.m. interval, the expression of OsAOS1 in α-linolenic acid metabolism and OsISA3 in starch and sucrose metabolism notably increased in indica rice, with no significant change in japonica rice. Additionally, the endogenous JA and α-amylase surged more significantly in indica rice than in japonica rice. The increase in soluble carbohydrate in indica rice is greater than in japonica rice, but the difference is not significant. Conclusions: These findings suggest that in the process of the floret opening, the α-linolenic acid metabolism and starch and sucrose metabolism are initiated earlier in indica rice, accompanied by a more pronounced elevation in endogenous JA and α-amylase. Furthermore, the smaller lodicule-lemma gap in indica rice contributes to earlier floret opening compared to japonica rice. Full article

Research indicates that, owing to the enhanced grain-filling rate of tetraploid rice, its yield has notably improved compared to previous levels. Studies conducted on diploid rice have revealed that optimal planting density and fertilization rates play crucial roles in regulating rice yield. In this study, we investigated the effects of different nitrogen application and planting density treatments on the growth, development, yield, and nitrogen utilization in tetraploid (represented by T7, an indica–japonica conventional allotetraploid rice) and diploid rice (Fengliangyou-4, represented by FLY4, a two-line super hybrid rice used as a reference variety for the approval of super rice with a good grain yield performance). The results indicated that the highest grain-filling rate of T7 could reach 77.8% under field experimental conditions due to advancements in tetraploid rice breeding. This is a significant improvement compared with the rate seen in previous research. Under the same conditions, T7 exhibited a significantly lower grain yield than FLY4, which could be attributed to its lower grain-filling rate, spikelets per panicle, panicle number m⁻², and harvest index score. Nitrogen application and planting density displayed little effect on the grain yield of both genotypes. A higher planting density significantly enhanced the leaf area index and biomass accumulation, but decreased the harvest index score. Compared with T7, FLY4 exhibited a significantly higher nitrogen use efficiency (NUE_g), which was mainly due to the higher nitrogen content in the straw. Increasing nitrogen application significantly decreased NUE_g due to its minimal effect on grain yield combined with its significant enhancement of nitrogen uptake. Our results suggest that the yield and grain-filling rate of T7 have been improved compared with those of previously tested polyploid rice, but are still lower than those of FLY4, and the yield of tetraploid rice can be further improved by enhancing the grain-filling rate, panicle number m⁻², and spikelets per panicle via genotype improvement. Full article

During the later reproductive period of rice growth, the chlorophyll in the leaves degraded, accompanied by the nitrogen (N) transportation from leaves to panicle, resulting in a change in leaf color from green to yellow. This study aimed to investigate the effects of exogenous N supply on leaf color-changing, N accumulation, N transportation, and N loss of indica-japonica hybrid rice during the grain-filling stage. Two indica-japonica hybrid rice cultivars, Chunyou 167 (CY167) and Chunyou 927 (CY927), which exhibited significant differences in leaf color-changing during the grain-filling stage, were selected as materials for field experiment and hydroponic experiment with low, medium, and high N treatments (LN, MN, and HN). The dynamic changes in SPAD value from heading to maturity were measured and fitted with quadratic function to extract leaf color-changing parameters; labeled ¹⁵N was used as N source after heading to trace the source of N in the panicle and the remobilization of vegetative organ N. The results showed that 67.37–72.38% of the panicle N was transported from vegetative organs, the N transport efficiency was the upper three leaves > lower leaves > stem, and about 3.1–35.0% of the transported N was lost via volatilization. The effects of exogenous N concentration on N harvest index, N dry matter/grain production efficiency, N reuse efficiency, and N loss were closely related to leaf color-changing parameters. In MN and HN treatment, the N loss was negatively correlated with the onset time of leaf color-changing (T₀) and the final leaf color index (CI_f), but positively correlated with the leaf color-changing rate (R_mean). Increasing the supply of exogenous N increased T₀ and CI_f, but decreased R_mean, N transport/reuse efficiency, N harvest index, and N dry matter/grain production efficiency. Compared to the cultivar CY167 with normal leaf color-changing, the “stay-green” cultivar CY927 had higher T₀, CI_f, and lower R_mean, resulting in less N volatilization loss, lower N harvest index and N transport efficiency, while higher N reuse efficiency. In conclusion, the exogenous N supply affects leaf color by influencing the transportation and reuse of leaf N during the grain-filling stage. Full article

OsNRAMP5 is a pivotal gene involved in the uptake and transport of cadmium and manganese in rice plants. While the knockout of OsNRAMP5 has significantly decreased cadmium accumulation in rice grains, its impact on the adaptability of indica hybrid rice and its paternal parent still needs to be more adequately explored. This study conducted a three-year field experiment with two of the OsNRAMP5 knockout lines (indica hybrid rice LYDG-1 and its paternal parent DG-1) and their wild-type at four distinct locations in the middle reaches of the Yangtze River. Their adaptability was evaluated by cadmium and manganese accumulation, yield traits, and grain quality. The findings reveal that OsNRAMP5 knockout lines, when grown in mildly and moderately Cd-contaminated paddies, exhibit significantly and stably lower cadmium and manganese accumulation compared with the wild-type. However, there were no significant differences in cadmium and manganese content between LYDG-1 and DG-1. Regarding yield traits, OsNRAMP5 knockout lines did not show a significant reduction compared with the wild-type, except for DG-1 in soil with lower manganese content. For grain quality, the quality of the appearance of OsNRAMP5 knockout lines significantly improved compared with the wild-type. However, the milling quality of DG-1 significantly reduced compared with the wild-type, while this negative impact for LYDG-1 was only observed in soils with lower manganese content. Overall, the indica hybrid rice with an OsNRAMP5 knockout exhibits better adaptability than its paternal parent in the middle reaches of the Yangtze River. These findings offer valuable insights into the potential application and promotion of OsNRAMP5 mutant rice varieties in the middle reaches of the Yangtze River. Full article