Search Results (166)

In this study, we evaluated the nitrous oxide production potential of denitrifying bacterial strains isolated from sediments of the urban wetland Santa María del Lago under anaerobic and aerobic conditions to determine their potential role in mitigating anthropogenic N₂O emissions, which have increased by approximately 40% since 1980, and if these emissions could be related to the absence of the nitrous oxide reductase gene (nosZ). The results demonstrated that denitrifying bacteria belonging to the genus Bacillus were able to generate nitrous oxide in high concentrations under both aerobic (up to 83 nM/h) and anaerobic (up to 3865.5 nM/h) conditions in cultures with optimal concentrations of nitrate and carbon. The amplification of the nosZ gene as marker of denitrifying microorganisms showed that only 50% of strains possess this gene, and its presence did not correlate with nitrous oxide reduction under anoxic conditions. Interestingly, one strain was able to reduce nitrous oxide in the presence of air, which is promising for its potential use in aerobic bioremediation systems that require microorganisms with a high affinity for this greenhouse gas to reduce emissions into the atmosphere. Full article

Anticoagulants, including warfarin, are often administered to patients who are exhibiting early symptoms of thromboembolic episodes or who have already experienced such episodes. However, warfarin has a limited therapeutic index and might cause bleeding and other clinical problems. Warfarin inhibits the vitamin K epoxide reductase complex subunit 1 (VKORC1), an enzyme essential for activating vitamin K, in the coagulation cascade. Genetic factors, such as polymorphisms, can change the natural function of VKORC1, causing variations in the medication reaction among individuals. Hence, before prescribing warfarin, the patient’s genetic profile should also be considered. In this study, an electrochemical genosensor capable of detecting the VKORC1 1639 G>A polymorphism was designed and optimized. This analytical approach detects the electric current obtained during the hybridization reaction between two 52 base pair complementary oligonucleotide sequences. Investigating public bioinformatic platforms, two DNA sequences with the A and G single-nucleotide variants were selected and designed. The experimental protocol of the genosensor implied the formation of a bilayer composed of a thiolate DNA and an alkanethiol immobilized onto gold electrodes, as well as the formation of a DNA duplex using a sandwich-format hybridization reaction through a fluorescein labelled DNA signalling probe and the enzymatic amplification of the electrochemical signal, detected by chronoamperometry. A detection limit of 20 pM and a linear range of 0.05–1.00 nM was obtained. A clear differentiation between A/A, G/A and G/G genotypes in biological samples was successfully identified by his novel device. Full article

This paper presents a 17–38 GHz wideband low-noise amplifier (LNA) designed in a 150-nm GaAs pHEMT process. The proposed amplifier adopts a cascode topology with an interstage inductor between the common-source (CS) and common-gate (CG) stages, and a series inductor at the source node of the CS stage for source degeneration. By incorporating these inductors in the amplification stage, simultaneous noise and input matching is facilitated, while achieving flat gain characteristics over a broad frequency range and ensuring stability. In addition, the amplification stage with inductors achieves input matching using only a shunt component in the DC bias path, without any series matching elements. This approach allows the amplifier to achieve simultaneous noise and input matching (SNIM), ensuring low-noise performance over a wide bandwidth. The simulation results show a flat gain of 20–23 dB and a low noise figure of 1.1–2.1 dB over the 17–38 GHz band. Full article

MIKC-type MADS-box transcription factors constitute one of the largest gene families in plants, playing pivotal roles in regulating plant growth and development, hormone signaling transduction, and responses to biotic and abiotic stresses. However, there have been no reports on the systematic identification and characterization of MIKC-type MADS-box proteins in walnuts. In this study, we identified 52 JrMADS genes in the walnut genome and transcriptome, and categorized them into 14 subfamilies through structural domain and phylogenetic tree analysis. It was found that these genes were unevenly distributed across 16 chromosomes. Within the MIKC-type MADS-box gene family, we identified three pairs of tandem-duplicated genes and 40 pairs of segmental duplicated genes, indicating that segmental duplication was the primary mechanism of gene amplification in walnut. Ka/Ks analysis showed that the family genes have undergone purifying selection during evolutionary processes. The promoter was predicted to contain cis-acting elements related to growth, development, plant hormones, and stress response. Expression profile analysis showed that JrMADS genes have different expression patterns in various tissues and developmental stages of male and female flower buds. Notably, an ancient clade of TM8 (JrMADS43) genes was found, which is absent in Arabidopsis but present in other flowering plants. Another gene, TM6 gene (JrMADS4), belongs to the AP3 subfamily and is a clade that has diverged from tomatoes. Through qPCR analysis, we verified the differential expression of JrMADS genes at different developmental stages (MB-1/2/3 and FB-1/2/3), with JrMADS5, JrMADS8, JrMADS14, JrMADS24, JrMADS40, JrMADS46, JrMADS47, JrGA3ox1, and JrGA3ox3 showing significantly higher expression in male than in female flower buds. In summary, our results provide valuable information for further biological functions research on MIKC-type MADS-box genes in walnut, such as flower organ development, and lays a solid foundation for future studies. Full article

This study presents high-fidelity numerical simulations of the shock-accelerated single-mode Richtmyer–Meshkov instability (RMI) in a light helium layer confined between two interfaces and surrounded by nitrogen gas. A high-order modal discontinuous Galerkin method is employed to solve the two-dimensional compressible Euler equations, enabling detailed investigation of interface evolution, vorticity dynamics, and flow structure development under various physical conditions. The effects of helium layer thickness, initial perturbation amplitude, and incident shock Mach number are systematically explored by analyzing interface morphology, vorticity generation, enstrophy, and kinetic energy. The results show that increasing the helium layer thickness enhances vorticity accumulation and interface deformation by delaying interaction with the second interface, allowing more sustained instability growth. Larger initial perturbation amplitudes promote earlier onset of nonlinear deformation and stronger baroclinic vorticity generation, while higher shock strengths intensify pressure gradients across the interface, accelerating instability amplification and mixing. These findings highlight the critical interplay between layer confinement, perturbation strength, and shock strength in governing the nonlinear evolution of RMI in light fluid layers. Full article

Tetraselmis chuii is a microalga commercialized because of its richness in health-beneficial molecules. Previous studies have profusely demonstrated the biological properties of compounds isolated from T. chuii, but data are not yet available on the impact that gastrointestinal digestion could exert. This article describes the passage of T. chuii through the gastrointestinal tract, combining the INFOGEST procedure and in vitro colonic fermentation to examine potential effects on the human colonic microflora composition and its metabolic activity. Microbial plate counting was conducted to determine the different groups of microorganisms. Amplification of the 16S ribosomal RNA gene was performed via polymerase chain reaction to examine in detail the main genera of bacteria, and its metabolic activity was evaluated by measuring of short-chain fatty acids (SCFAs) by gas chromatography. The presence of T. chuii modified the fecal microbiota. Although the evolution of lactic acid bacteria and Enterococcus spp. content during 72 h showed that the use of T. chuii, compared to fructopolysaccharides such as inulin, would not provide nutritional advantages, the microalgae extract contributed to a significant decrease in Clostridium, Staphylococcus, and Enterobacteriaceae. Furthermore, T. chuii increased the relative abundance of Akkermansia and Butyricimonas, genera considered highly beneficial. In correlation with the presence of these microorganisms, the results show that the presence of T. chuii favored the release of SCFA, such as acetic (20 mM), propionic (>5 mM), isovaleric (0.3 mM), isobutyric (0.15 mM), and, mainly, butyric (>2 mM), after 72 h colonic fermentation, being indicators of gut health. These findings suggest that T. chuii has potential as a functional ingredient for promoting health through its modulatory effects on the intestinal microbiota. Full article

Stretchable organic field-effect transistors (OFETs), with inherent flexibility, versatile sensing mechanisms, and signal amplification properties, provide a unique device-level solution for the real-time, in situ detection of trace gaseous pollutants. However, serious challenges remain regarding the synergistic optimization of OFET gas sensor production preparation, mechano-electrical properties, and gas-sensing performance. Although the introduction of microstructures can theoretically provide OFETs with enhanced sensing performance, the high-precision process required for microstructure fabrication limits scale-up. Herein, a straightforward hybrid solvent strategy is proposed for regulating the intrinsic microstructure of the organic semiconductor layer, with the aim of constructing an ultrasensitive PDVT-10/SEBS fully stretchable OFET NO₂ sensor. The binary solvent system induces the formation of nanoneedle-like structures in the PDVT-10/SEBS organic semiconductor, which achieves a maximum mobility of 2.71 cm² V⁻¹ s⁻¹, a switching current ratio generally exceeding 10⁶, and a decrease in mobility of only 30% at 100% strain. Specifically, the device exhibits a response of up to 77.9 × 10⁶ % within 3 min and a sensitivity of up to 1.4 × 10⁶ %/ppm, and it demonstrates effective interference immunity, with a response of less than 100% to nine interferences. This work paves the way for next-generation wearable smart sensors. Full article

Compact, broadband, multi-channel RF chips with low loss and high integration are required for high-performance phased-array systems. Presented in this paper is a four-channel, multifunction RF chip operating in the 5–18 GHz frequency range that integrates broadband phase shifting, amplitude control, power amplification, and switching functions. The chip is designed to have flip-chip bonding and stacked gold bumps to enable the compact 3D integration of the GaAs pHEMT and Si-CMOS. To ensure high-density interconnects with minimal parasitic effects, a fan-in redistribution process is implemented. The RF front-end part of this chip, fabricated through a 0.15 µm GaAs pHEMT process, integrates 6-bit digital phase shifters, 6-bit digital attenuators, low-noise amplifiers (LNAs), power amplifiers (PAs), and single-pole double-throw (SPDT) switches. To enhance multi-channel isolation and reduce crosstalk between RF chips and digital circuits, high isolation techniques, including a ground-coupled shield layer in the fan-in process and on-chip shield cavities, are utilized, which achieve isolation levels greater than 41 dB between adjacent RF channels. The measurement results demonstrate a reception gain of 0 dB with ±0.6 dB flatness, an NF below 11 dB, and transmit gain of more than 10 dB, with a VSWR of below 1.6 over the entire 5–18 GHz frequency band. The 6-bit phase shifter achieves a root mean square (RMS) phase error below 2.5° with an amplitude variation of less than 0.8 dB, while the 6-bit attenuator exhibits an RMS attenuation error of below 0.5 dB and a phase variation of less than 7°. The RF and digital chips are heterogeneously integrated using flip-chip and fan-in technology, resulting in a compact chip size of 6.2 × 6.2 × 0.33 mm³. These results validate that this is a compact, high-performance solution for advanced phased-array radar applications. Full article

Efficient traffic signal control plays a critical role in promoting sustainable mobility by reducing congestion and minimizing vehicle emissions. This paper proposes an enhanced max-pressure (MP) signal control strategy that explicitly accounts for phase switching time losses in grid road networks. While the traditional MP control strategy is recognized for its decentralized architecture and simplicity, it often neglects the delays introduced by frequent phase changes, limiting its real-world effectiveness. To address this issue, three key improvements are introduced in this study. First, a redefined phase pressure formulation is presented, which incorporates imbalances in traffic demand across multiple inlet roads within a single phase. Second, a dynamic green phase extension mechanism is developed, which adjusts phase durations in real time based on queue lengths to improve traffic flow responsiveness. Third, a current-phase protection mechanism is implemented by applying an amplification factor to the current-phase pressure calculations, thereby mitigating unnecessary phase switching. Simulation results using SUMO on a grid network demonstrate that the proposed strategy significantly reduces average vehicle delays and queue lengths compared with traditional MP, travel-time based MP, and fixed-time control strategies, leading to improved overall traffic efficiency. Specifically, the proposed method reduces total delay by 24.83%, 26.67%, and 47.11%, and average delay by approximately 16.18%, 18.91%, and 36.22%, respectively, while improving traffic throughput by 2.25%, 2.76%, and 5.84%. These improvements directly contribute to reducing traffic congestion, fuel consumption, and greenhouse gas emissions, thereby reinforcing the role of adaptive signal control in achieving smart and sustainable cities. The proposed approach can serve as a practical reference for improving real-world traffic signal control systems, particularly in regions seeking to improve sustainability and operational efficiency. Full article

The Arctic is undergoing unprecedented transformations with implications for regional ecosystems, Indigenous communities, and global climate systems. Ocean heat transport, permafrost thawing, and ice–albedo interactions are some of the feedback mechanisms that contribute to the increase in average temperatures in the Arctic. These processes increase the risks associated with climate change globally by speeding up the loss of sea ice, changes in biodiversity, and greenhouse gas emissions. This review synthesises recent advances in Arctic climate science, focusing on the drivers and feedback mechanisms of Arctic amplification, its cascading impacts on ecosystems and socioeconomic systems, and emerging governance challenges. It highlights critical knowledge gaps, specifically regarding the importance of Indigenous knowledge and interdisciplinary approaches in climate adaptation strategies. This study emphasises the need for inclusive, transformative, and collaborative approaches by analysing governance frameworks, climate policies, and community resilience initiatives. Innovative adaptation strategies are suggested, such as ecosystem-based adaptations, climate-resilient infrastructure, and the switch to renewable energy to address these issues. Arctic-specific governance recommendations are proposed to develop sustainable solutions that preserve its ecology while reducing its global effects by filling research gaps and promoting international collaboration. The future of the Arctic is not merely a regional issue but also a global one, requiring swift and coordinated action to address climate challenges. Full article

In spite of the increasing industrial cultivation of lavender (Lavandula angustifolia Mill.), no genetic linkage map and mapping of QTLs (quantitative trait locus) has been reported for Lavandula species. We present the development of a set of SSR (simple sequence repeat) markers and the first genetic linkage map of lavender following the genotyping of a segregating population obtained by the self-pollination of the industrial lavender variety Hemus. The resulting genetic map comprises 25 linkage groups (LGs) corresponding to the chromosome number of the lavender reference genome. The map includes 375 loci covering a total of 2631.57 centimorgan (cM). The average marker distance in the established map is 7.01 cM. The comparison of the map and reference genome sequence shows that LG maps cover an average of 82.6% of the chromosome sequences. The PCR amplification tests suggest that the developed SSR marker set possesses high intra-species (>93%) and inter-species (>78%) transferability. The QTL analysis employing the constructed map and gas chromatography/mass spectrometry (GC/MS) dataset of flower extracted volatiles resulted in the mapping of a total of 43 QTLs for the accumulation of 25 different floral volatiles. The comparison of the genome location of the QTLs and known biosynthetic genes suggests candidate genes for some QTLs. Full article

Background: Rice bacterial leaf blight, caused by the Gram-negative bacterium Xanthomonas oryzae pv. Oryzae (Xoo), significantly impacts rice production. To address this disease, research efforts have focused on discovering and utilizing novel disease-resistant genes and examining their functional mechanisms. Methods and Results: In this study, a variety of bacterial strains were utilized. CX28-3, AX-11, JC12-2, and X10 were isolated from the high-altitude japonica rice-growing region on the Yunnan Plateau. Additionally, PXO61, PXO86, PXO99, and PXO339, sourced from the International Rice Research Institute (IRRI), were included in the analysis. To evaluate the resistance characteristics of Haonuoyang, artificial leaf cutting and inoculation methods were applied. Results indicated that Haonuoyang exhibited broad-spectrum resistance. Additionally, to explore the genetic mechanisms of resistance, the TFAIII-type transcription factor OsZFPH was cloned from Haonuoyang using PCR amplification. The subcellular localization method identified the precise location of the OsZFPH gene within the cell. The expression of OsZFPH was induced by Xoo stress. The overexpression of OsZFPH resulted in increased activities of enzymes, including SOD, CAT, and POD, while silencing the gene led to reduced enzyme activities. Furthermore, the hormones SA (salicylic acid), JA (jasmonic acid), and GA (gibberellin) were shown to positively regulate the gene expression. Protein interactions with OsZFPH were verified through a yeast two-hybrid system and BiFC technology. Hap5, which aligned with the sequence of Haonuoyang, was found to belong to a haplotype consisting of Jingang 30, 40 resequenced rice varieties, 18 Oryza rufipogon, and 29 Oryza granulata. Conclusions: The findings of this study emphasize the vital role of OsZFPH in rice resistance to bacterial leaf blight. The identification of broad-spectrum resistance in Haonuoyang and the understanding of OsZFPH gene functions provide valuable insights for the future development of rice varieties with improved resistance to this destructive disease. Full article

Organic field-effect transistors (OFETs) are an ideal platform for intrinsically stretchable sensors due to their diverse mechanisms and unique electrical signal amplification characteristics. The remarkable advantages of intrinsically stretchable sensors lie in their molecular tunability, lightweight design, mechanical robustness, solution processability, and low Young’s modulus, which enable them to seamlessly conform to three-dimensional curved surfaces while maintaining electrical performance under significant deformations. Intrinsically stretchable sensors have been widely applied in smart wearables, electronic skin, biological detection, and environmental protection. In this review, we summarize the recent progress in intrinsically stretchable sensors based on OFETs, including advancements in functional layer materials, sensing mechanisms, and applications such as gas sensors, strain sensors, stress sensors, proximity sensors, and temperature sensors. The conclusions and future outlook discuss the challenges and future outlook for stretchable OFET-based sensors. Full article

In situ X-ray reciprocal space mapping was performed during the interval heating and cooling of InGaN/GaN quantum wells (QWs) grown via metal–organic vapor phase epitaxy (MOVPE). Our detailed in situ X-ray analysis enabled us to track changes in the peak intensities and radial and angular broadenings of the reflection. By simulating the radial diffraction profiles recorded during the thermal cycle treatment, we demonstrate the presence of indium concentration distributions (ICDs) in the different QWs of the heterostructure (1. QW, bottom, 2. QW, middle, and 3. QW, upper). During the heating process, we found that the homogenization of the QWs occurred in the temperature range of 850 °C to 920 °C, manifesting in a reduction in ICDs in the QWs. Furthermore, there is a critical temperature (T = 940 °C) at which the mean value of the indium concentration starts to decrease below 15% in 1. QW, indicating the initiation of decomposition in 1. QW. Moreover, further heating up to 1000 °C results in extended diffuse scattering along the angular direction of the diffraction spot, confirming the propagation of the decomposition and the formation of trapezoidal objects, which contain voids and amorphous materials (In-Ga). Heating InGaN QWs up to T = 1000 °C led to a simultaneous decrease in the indium content and ICDs. During the cooling phase, there was no significant variation in the indium concentrations in the different QWs but rather an increase in the defect area, which contributes to the amplification of diffuse scattering. A comparison of ex situ complementary high-resolution transmission microscopy (Ex-HRTEM) measurements performed at room temperature before and after the thermal cycle treatment provides proof of the formation of four different types of defects in the QWs, which result from the decomposition of 1. QW during the heating phase. This, in turn, has strongly influenced the intensity of the photoluminescence emission spectra without any detectable shift in the emission wavelength λ_MQWs. Full article

Zanthoxylum armatum (Z. armatum) is a significant economic tree species known for its medicinal and edible properties. However, the presence of prickles on Z. armatum poses a considerable challenge to the advancement of its industry. Numerous studies have indicated that the C2H2 zinc finger protein (C2H2-ZFPs) families are crucial in the development of plant trichomes or prickles. This study identified 78 ZaC2H2 genes from the Z. armatum genome, categorizing them into three groups and analyzing their protein physicochemical properties, chromosomal locations, conserved domains, and gene structures. The evolutionary analysis indicates that the amplification of ZaC2H2 genes primarily results from whole-genome duplication or segmental duplication, and these genes have undergone strong purifying selection pressure throughout their evolutionary history. The analysis of cis-acting elements revealed that they contain various hormone response elements, such as ABRE, AuxRR, the CGTCA motif, GARE motifs, and TCA elements, which are responsive to ABA, IAA, MeJA, GA, and SA signals. RT-qPCR was employed to assess the expression levels of the candidate genes ZaC2H2-45, ZaC2H2-46, ZaC2H2-49, and ZaC2H2-55 under the treatment of five hormones. The results indicated that the expression levels of the ZaC2H2-46 and ZaC2H2-55 genes were significantly up-regulated under NAA, SA, and MeJA treatments. These results will help to further understand the characteristics of the ZaC2H2 gene family and provide a theoretical basis for studying the development of prickles. Full article