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37 pages, 9843 KiB  
Article
Soy Sauce Fermentation with Cordyceps militaris: Process Optimization and Functional Profiling
by Wanying Song, Xinyue Zhang, Huiyi Yang, Hanyu Liu and Baodong Wei
Foods 2025, 14(15), 2711; https://doi.org/10.3390/foods14152711 - 1 Aug 2025
Viewed by 229
Abstract
This study presents the development and optimization of a functional soy sauce fermented with Cordyceps militaris (C. militaris), a medicinal fungus known for its high cordycepin and polysaccharide content. Using C. militaris as the sole starter culture, the process aimed to [...] Read more.
This study presents the development and optimization of a functional soy sauce fermented with Cordyceps militaris (C. militaris), a medicinal fungus known for its high cordycepin and polysaccharide content. Using C. militaris as the sole starter culture, the process aimed to improve both nutritional and functional properties. Response surface methodology was employed to optimize the entire fermentation process. During the koji stage, temperature, aeration, and inoculum concentration were adjusted to maximize protease activity and cordycepin production. In the fermentation stage, temperature, brine concentration, and water-to-material ratio were optimized to increase amino acid nitrogen and bioactive compound levels. Under optimal conditions (24 °C, 679.60 LPM aeration, 9.6% inoculum for koji; 32 °C, 12% brine, 1.53:1 water-to-material ratio for fermentation), the resulting soy sauce contained 1.14 ± 0.05 g/100 mL amino acid nitrogen and 16.88 ± 0.47 mg/100 mL cordycepin. Compared with traditionally fermented soy sauce, the C. militaris product exhibited a darker color, enhanced umami taste, and a distinct volatile profile featuring linoleic acid, methyl palmitate, and niacinamide. These results demonstrate the feasibility of using C. militaris in soy sauce fermentation and its potential as a novel functional condiment with improved bioactivity and sensory quality. Full article
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20 pages, 6229 KiB  
Article
Integrating Network Pharmacology and Experimental Validation to Explore the Effect and Mechanism of Inonotus obliquus Polysaccharide in the Treatment of Rheumatoid Arthritis
by Yuan Fu, Tianyi Jiang, Xizhu Fang, Yifang Chen, Jiawei Li, Shengnan Huang, Fangfang Li and Dan Jin
Pharmaceuticals 2025, 18(7), 1017; https://doi.org/10.3390/ph18071017 - 8 Jul 2025
Viewed by 509
Abstract
Background/Objectives: Rheumatoid arthritis (RA) is a chronic, systemic, and progressive autoimmune–inflammatory disease primarily affecting small joints. Inonotus obliquus polysaccharide (IOP) is the main component of the parasitic fungus obliquus, which has anti-tumor, anti-inflammatory, and antioxidant effects. However, whether IOP has a therapeutic effect [...] Read more.
Background/Objectives: Rheumatoid arthritis (RA) is a chronic, systemic, and progressive autoimmune–inflammatory disease primarily affecting small joints. Inonotus obliquus polysaccharide (IOP) is the main component of the parasitic fungus obliquus, which has anti-tumor, anti-inflammatory, and antioxidant effects. However, whether IOP has a therapeutic effect on RA is still unclear. Thus, this study aimed to reveal the effect of IOP on MH7A cells and collagen-induced arthritis (CIA) rats and to investigate the molecular mechanism of IOP in RA. Methods: In this study, network pharmacology was used to identify the key signaling pathways in IOP treatment of RA. The effect of IOP was verified in rats with CIA. We performed CCK-8, EdU, colony formation assay, cell apoptosis, cell migration and invasion, Western blot analysis, and immunofluorescence to elucidate the effect of IOP on the proliferation, apoptosis, migration and invasion of MH7A cells and revealed its modulation of the NF-κB and NLRP3 inflammasome signaling pathways. Results: IOP treatment of CIA rats significantly alleviated joint swelling, synovial tissue proliferation and erosion, and reduced the expression of inflammatory factors TNF-α, IL-6, IL-1β and IL-18. In vitro, IOP significantly inhibited the proliferation, migration, and invasion abilities of TNF-α-stimulated MH7A cells and promoted their apoptosis. Mechanistically, IOP inhibited the NF-κB and NLRP3 inflammasome activation. Conclusions: This study revealed that IOP exerts anti-RA effects by downregulating the NF-κB and NLRP3 inflammasome signaling pathways, promoting cell apoptosis, and inhibiting the expression of inflammatory cytokines, representing a promising therapeutic option for RA. Full article
(This article belongs to the Special Issue Natural Products Derived from Fungi and Their Biological Activities)
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29 pages, 4367 KiB  
Article
Endophytic Microbiome Is a Unique Repository of Bio-Foes Against Toxigenic Fungi Harming Peanut Productivity
by Nagwa I. M. Helal, Mona H. Badawi, Abeer M. El-Hadidy, Mohamed K. M. Agha, Ahmed Abou-Shady and Mohamed Fayez
Microbiol. Res. 2025, 16(7), 141; https://doi.org/10.3390/microbiolres16070141 - 1 Jul 2025
Viewed by 353
Abstract
The major objective was to investigate the protective capabilities of endophytic bacterial strains isolated from a number of medicinal plant species towards Aspergillus spp. secured from the internal tissues of fungi-infected peanuts. Among 32 fungal isolates surveyed for mycotoxin production in various culture [...] Read more.
The major objective was to investigate the protective capabilities of endophytic bacterial strains isolated from a number of medicinal plant species towards Aspergillus spp. secured from the internal tissues of fungi-infected peanuts. Among 32 fungal isolates surveyed for mycotoxin production in various culture media (PDA, RBCA, YES, CA), 10 isolates qualitatively producing AFB1, besides 10 OTA-producers, were assayed by HPLC for quantitative toxin production. Aspergillus spp. isolate Be 13 produced an extraordinary quantity of 1859.18 μg mL−1 AFB1, against the lowest toxin level of 280.40 μg mL−1 produced by the fungus isolate IS 4. The estimated amounts of OTA were considerably lower and fell in the range 0.88–6.00 μg mL−1; isolate Sa 1 was superior, while isolate Be 7 seemed inferior. Based on ITS gene sequencing, the highly toxigenic Aspergillus spp. isolates Be 13 and Sa 1 matched the description of A. novoparasiticus and A. ochraceus, respectively, ochraceus, respectively, which are present in GenBank with identity exceeding 99%. According to 16S rRNA gene sequencing, these antagonists labeled Ar6, Ma27 and So34 showed the typical characteristics of Pseudomonas aeruginosa, Bacillus subtilis and Bacillus velezensis, respectively, with similarity percentages of 99–100. The plant growth-promoting activity measurements of the identified endophytes indicated the production of 16.96–80.00 μg/100 mL culture medium of IAA. Phosphate-solubilizing capacity varied among endophytes from 2.50 to 21.38 μg/100 mL. The polysaccharide production pool of bacterial strains ranged between 2.74 and 6.57 mg mL−1. P. aeruginosa Ar6 and B. velezensis successfully produced HCN, but B. subtilis failed. The in vitro mycotoxin biodegradation potential of tested bacterial endophytes indicated the superiority of B. velezensis in degrading both mycotoxins (AFB1-OTA) with average percentage of 88.7; B. subtilis ranked thereafter (85.6%). The 30-day old peanut (cv. Giza 6) seedlings grown in gnotobiotic system severely injured due to infection with AFB1/OTA-producing fungi, an effect expressed in significant reductions in shoot and root growth traits. Simultaneous treatment with the endophytic antagonists greatly diminished the harmful impact of the pathogens; B. velezensis was the pioneer, not P. aeruginosa Ar6. In conclusion, these findings proved that several endophytic bacterial species have the potential as alternative tools to chemical fungicides for protecting agricultural commodities against mycotoxin-producing fungi. Full article
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19 pages, 1904 KiB  
Review
Research Progress on the Isolation, Purification, Structural Characteristics and Biological Activity Mechanism of Pleurotus citrinopileatus Polysaccharides
by Zixu Liu and Honglei Wang
Molecules 2025, 30(13), 2816; https://doi.org/10.3390/molecules30132816 - 30 Jun 2025
Viewed by 252
Abstract
Pleurotus citrinopileatus, a valuable edible fungus characterized by its distinctive light yellow coloration and saprophytic growth on elm wood, has garnered increasing scientific interest due to its diverse bioactive constituents. Among these, polysaccharides derived from P. citrinopileatus (PCPs) have received the most [...] Read more.
Pleurotus citrinopileatus, a valuable edible fungus characterized by its distinctive light yellow coloration and saprophytic growth on elm wood, has garnered increasing scientific interest due to its diverse bioactive constituents. Among these, polysaccharides derived from P. citrinopileatus (PCPs) have received the most extensive research attention. This review summarizes recent advances in the chemical structure and biological activities of PCPs. Structurally, PCPs are primarily composed of repeating units such as →3)-α-D-Glcp-(1→ and →6)-α-D-Galp-(1→. Functionally, PCPs exhibit a range of bioactivities, including immunomodulatory, hypoglycemic, and antitumor effects. Furthermore, the underlying mechanisms associated with these biological activities are also explored. This review aims to provide a comprehensive reference for future studies and facilitate the development and application of PCPs as potential functional food ingredients or therapeutic agents. Full article
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18 pages, 7422 KiB  
Article
Integrated Proteomics and Metabolomics Reveal Regulatory Pathways Underlying Quality Differences Between Wild and Cultivated Ophiocordyceps sinensis
by Chuyu Tang, Tao Wang, Yuejun Fan, Jie Wang, Mengjun Xiao, Min He, Xiyun Chang, Yuling Li and Xiuzhang Li
J. Fungi 2025, 11(7), 469; https://doi.org/10.3390/jof11070469 - 20 Jun 2025
Cited by 1 | Viewed by 399
Abstract
Ophiocordyceps sinensis, is an entomopathogenic fungus renowned for its medicinal properties, thriving in the frigid and high-altitude regions of the Qinghai–Tibet plateau. Given the limited availability of wild resources and the increasing recognition of their medicinal value, the cultivation of O. sinensis [...] Read more.
Ophiocordyceps sinensis, is an entomopathogenic fungus renowned for its medicinal properties, thriving in the frigid and high-altitude regions of the Qinghai–Tibet plateau. Given the limited availability of wild resources and the increasing recognition of their medicinal value, the cultivation of O. sinensis was initiated. However, there is a paucity of research investigating the disparities in their quality. This study evaluated the primary physiological indicators of both wild and cultivated O. sinensis. It also employed proteome and untargeted metabolome approaches to elucidate the differences in quality and underlying mechanisms between the two types. The results revealed that the contents of key representative components, including polysaccharide, crude protein, adenosine, and mannitol, were higher in wild O. sinensis than in cultivated O. sinensis. A total of 499 differentially expressed proteins (DEPs), including 117 up-regulated and 382 down-regulated DEPs, were identified in wild and cultivated O. sinensis. Additionally, 369 up-regulated differentially accumulated metabolites (DAMs) and 737 down-regulated DAMs were also identified. Wild O. sinensis had higher relative levels of lysophospholipid metabolites, while cultivated O. sinensis had higher relative levels of aldehydes and carboxylic acids. Correlation analysis revealed that different habitats altered 47 pathways shared between the proteome and metabolome, including carbohydrate metabolism and energy metabolism. β-glucosidase and α-galactosidase play essential roles in carbohydrate catabolism and may indirectly influence amino acid synthesis through energy metabolic pathways. The differential expression of polyamine oxidase (PAO) could reflect variations in polyamine metabolism and ammonia production between wild and cultivated O. sinensis. These variations may consequently affect nitrogen homeostasis and the biosynthesis of nitrogen-containing compounds, ultimately leading to differences in nutritional quality. In conclusion, these findings offer a novel perspective on the applications of O. sinensis and serve as a reference for the targeted development of cultivated O. sinensis. Full article
(This article belongs to the Special Issue Fungal Metabolomics and Genomics)
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14 pages, 1793 KiB  
Article
Characterization of Biofilm Formation by the Dermatophyte Nannizzia gypsea
by Bruno B. A. Arantes, Ana Karla L. F. Cabral, Kelvin S. dos Santos, Matheus B. Mendonça, Rafaela C. dos Santos, Beatriz C. M. Bugalho, Lígia De S. Fernandes, Luis R. Martinez, Ana Marisa Fusco-Almeida and Maria José S. Mendes-Giannini
J. Fungi 2025, 11(6), 455; https://doi.org/10.3390/jof11060455 - 14 Jun 2025
Viewed by 653
Abstract
Dermatophytosis is a fungal infection that affects the skin, hair, and nails, impacting approximately 25% of the global population. Nannizzia gypsea is a geophilic fungus that can cause infections in humans and animals. Several studies have been conducted regarding its virulence, or ability [...] Read more.
Dermatophytosis is a fungal infection that affects the skin, hair, and nails, impacting approximately 25% of the global population. Nannizzia gypsea is a geophilic fungus that can cause infections in humans and animals. Several studies have been conducted regarding its virulence, or ability to cause disease. This species may produce keratinolytic enzymes and form biofilms, which can increase resistance to treatment. Thus, this study focuses on investigating the biofilm formation of N. gypsea isolated from canine dermatophytosis using an ex vivo hair model, its biofilm extracellular matrix macromolecular contents, and the expression of genes involved in the colonization of keratinized surfaces. The biofilm was analyzed for metabolic activity using the XTT reduction assay, crystal violet staining to measure biofilm biomass, scanning electron microscopy (SEM), and the presence of polysaccharides, proteins, and extracellular DNA in the biofilm extracellular matrix. The virulence genes subtilisin 7, fungalysin (extracellular metalloproteinase), and efflux pump (Multidrug and Toxin Extrusion Protein 2) were evaluated by qPCR, comparing the planktonic and biofilm phenotypes. N. gypsea formed a robust biofilm, which matured after 5 days. Scanning electron microscopy (SEM) revealed the presence of an extensive extracellular matrix. In the hair model, the characteristic ectothrix parasitism of the species is observable. The gene expression analysis revealed a higher expression of all evaluated genes in the biofilm form compared to the planktonic form. Thus, N. gypsea exhibits a biofilm characterized by a robust extracellular matrix and high gene expression of factors related to pathogenesis and resistance. Full article
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19 pages, 3538 KiB  
Article
Aquafaba and Cinnamon Essential Oil for the Production of Biodegradable and Compostable Wine Vineyard Waste-Based Material
by Sergio Moraga-Bustos, Yessica Rivas, Ricardo Villalobos and Marcela Jarpa-Parra
Resources 2025, 14(5), 76; https://doi.org/10.3390/resources14050076 - 1 May 2025
Viewed by 862
Abstract
(1) Grape stalks and aquafaba (Aq) from chickpeas are promising agricultural byproducts with potential applications in the development of sustainable biocomposite materials due to their ligno-cellulose and protein content. (2) This study aimed to evaluate the incorporation of Aq and cinnamon essential oil [...] Read more.
(1) Grape stalks and aquafaba (Aq) from chickpeas are promising agricultural byproducts with potential applications in the development of sustainable biocomposite materials due to their ligno-cellulose and protein content. (2) This study aimed to evaluate the incorporation of Aq and cinnamon essential oil (CEO) into grape stalk-based materials to enhance mechanical properties and prevent microbial contamination. Four formulations were prepared, and their mechanical, physicochemical, and antifungal properties were assessed. (3) The incorporation of CEO significantly reduced water absorption, while formulations containing Aq exhibited the highest mechanical resistance, likely due to synergistic interactions between proteins and polysaccharides that modified the microstructure of cellulose fibers. Scanning electron microscopy (SEM) images supported these findings. Additionally, CEO-treated samples showed resistance to fungal contamination by Botrytis cinerea, unlike untreated samples, which were colonized by the fungus. Biodegradability tests indicated slower degradation for CEO-treated samples (10 weeks) compared to those without CEO (5–7 weeks). (4) The results suggest that the combination of Aq and CEO creates a promising material for use in food packaging, though further research is needed to fully understand the reinforcement mechanisms. Full article
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18 pages, 3330 KiB  
Article
Structural Elucidation of Heteropolysaccharides from the Peach-Shaped Dictyophora indusiata and Its Anti-Inflammatory Activity
by Ying He, Hao Yang, Yaxin Liu, Yanting Sun, Zeguo Feng, Xueying Zheng, Fei Wang, Lei Ma, Jianbao Zhang, Dan Xu, Hui Guo, Liguo Qin and Yali Zhang
Foods 2025, 14(9), 1536; https://doi.org/10.3390/foods14091536 - 27 Apr 2025
Viewed by 522
Abstract
Dictyophora indusiata is commonly utilized as a functional food in China and other Asian countries. The peach-shaped phase of this fungus is nutritionally and taste-wise similar to its mature fruiting bodies. However, there is limited research on the polysaccharides found in the peach-shaped [...] Read more.
Dictyophora indusiata is commonly utilized as a functional food in China and other Asian countries. The peach-shaped phase of this fungus is nutritionally and taste-wise similar to its mature fruiting bodies. However, there is limited research on the polysaccharides found in the peach-shaped D. indusiata. A heteropolysaccharide was extracted from the volva of peach-shaped D. indusiata (DIVP). Analyses using high-performance gel permeation chromatography, methylation and NMR revealed that DIVP comprises glucose, glucuronic acid, galactose, and mannose. Its structure features a backbone that consists of →3)-β-D-Glcp-(1→ units with branches at →4)-β-D-Glcp-(1→, →6)-α-D-Galp-(1→ and terminal α-Manp-(1→ residues. Physicochemical assessments including X-ray diffraction, thermal, zeta potential and viscosity characterization indicated that DIVP is a semi-crystalline polymer exhibiting excellent physical and thermal stability. Cytokine antibody array and proteome profiler human phosphokinase analyses demonstrated that DIVP downregulates the expression levels of cytokines and alters the phosphorylation status of 16 proteins in human U937 macrophages induced by lipopolysaccharides, indicating its anti-inflammatory activity. These findings suggest that the polysaccharide from the volva of peach-shaped D. indusiata is primarily composed of β-1,3-glucan, which exhibits stable physicochemical properties and anti-inflammatory activity, providing a foundation for its potential use as an anti-inflammatory agent or functional food. Full article
(This article belongs to the Section Nutraceuticals, Functional Foods, and Novel Foods)
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40 pages, 4058 KiB  
Review
Bioactive Polysaccharides from Hericium erinaceus: Extraction, Structure, Bioactivities, and Applications
by Fangzhi Ge, Yan Chen, Binshuo Wang, Wenxin Zhou, Baoxiang Du and Lin Hou
Molecules 2025, 30(8), 1850; https://doi.org/10.3390/molecules30081850 - 20 Apr 2025
Cited by 1 | Viewed by 2195
Abstract
Hericium erinaceus, an edible fungus belonging to the family Odontaceae, is predominantly found in Western Europe, North America, and East Asia. In China, it primarily thrives in the mountainous and forested regions in the northeast, north, and southwest. Historically, Hericium erinaceus has [...] Read more.
Hericium erinaceus, an edible fungus belonging to the family Odontaceae, is predominantly found in Western Europe, North America, and East Asia. In China, it primarily thrives in the mountainous and forested regions in the northeast, north, and southwest. Historically, Hericium erinaceus has served as a medicinal and nutritional entity. Its mycelia and fruiting bodies are the products of its vegetative growth stage and reproductive growth stage, respectively. The principal active components are different Hericium erinaceus polysaccharides (HEPs), which are a group of polysaccharides primarily composed of galactose, glucose, and a small amount of mannose and fucose. An extremely small number of HEPs contain fructose, glucuronic acid, xylose, arabinose, and other components. The common extraction method employed is water extraction followed by alcohol precipitation. HEPs exhibit a diverse array of biological activities, including immune enhancement, anti-tumor effects, anti-inflammatory properties, antioxidant capabilities, and antiviral functions. This paper provides a comprehensive review of recent advancements in the extraction, separation, purification, structural analysis, biological activity, and toxicity assessments of HEPs. Additionally, it discusses the opportunities and challenges associated with scientific research and practical applications in this field. Full article
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21 pages, 4951 KiB  
Article
The Nearly Complete Genome of Grifola frondosa and Light-Induced Genes Screened Based on Transcriptomics Promote the Production of Triterpenoid Compounds
by Yang Yang and Xuebo Hu
J. Fungi 2025, 11(4), 322; https://doi.org/10.3390/jof11040322 - 18 Apr 2025
Viewed by 529
Abstract
Grifola frondosa, commonly known as turkey tail, is a valuable fungus with medicinal and culinary uses, rich in bioactive compounds like triterpenoid polysaccharides that contribute to health benefits. Here, we constructed a nearly complete genome of G. frondosa CH1 using Illumina, PacBio [...] Read more.
Grifola frondosa, commonly known as turkey tail, is a valuable fungus with medicinal and culinary uses, rich in bioactive compounds like triterpenoid polysaccharides that contribute to health benefits. Here, we constructed a nearly complete genome of G. frondosa CH1 using Illumina, PacBio HiFi, and Hi-C sequencing technologies, resulting in a 35.74 Mb genome with 12,526 protein-coding genes. The genome spans 12 chromosomes, all with intact telomeric structures and no gaps. The BUSCO completeness scores of 95.1% and 99.1% for the genome and genes, respectively, indicate high assembly quality and high completeness of gene prediction. Phylogenetic analysis showed a close relationship between G. frondosa CH1 and Trametes cinnabarina. Transcriptomic analysis under varying light conditions showed changes in the expression of genes, especially those related to terpenoid synthesis, with several CAZymes and CYP450 genes also exhibiting light-induced variations. Ten triterpenoid secondary metabolite gene clusters were identified, three of which were light-sensitive, indicating that light exposure regulates triterpenoid metabolism. This study provides valuable data supporting the high-quality genome of G. frondosa and offers new insights into the light-induced regulation of its metabolism. Full article
(This article belongs to the Section Fungal Genomics, Genetics and Molecular Biology)
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12 pages, 3097 KiB  
Communication
L-Rhamnose Dehydrogenase LraA of Aspergillus niger Shows High Substrate Specificity Matching Its Expression Profile
by Agata Terebieniec, Li Xu, Mao Peng, Miia R. Mäkelä and Ronald P. de Vries
J. Fungi 2025, 11(4), 301; https://doi.org/10.3390/jof11040301 - 10 Apr 2025
Viewed by 514
Abstract
L-rhamnose is one of the main monomeric sugars of rhamnogalacturonan I and II, which are polysaccharide components of pectin. In the ascomycete fungus Aspergillus niger it is metabolized through the non-phosphorylated L-rhamnose pathway, of which the first step is catalyzed by L-rhamnose dehydrogenase [...] Read more.
L-rhamnose is one of the main monomeric sugars of rhamnogalacturonan I and II, which are polysaccharide components of pectin. In the ascomycete fungus Aspergillus niger it is metabolized through the non-phosphorylated L-rhamnose pathway, of which the first step is catalyzed by L-rhamnose dehydrogenase (LraA), converting L-rhamnose into L-rhamnono-γ-lactone. This enzyme belongs to PFAM PF00106, unlike most of other reductases/dehydrogenases involved in fungal sugar catabolism that are typically assigned to PF00248 and PF00107. The enzymes of those families have broad substrate specificity and in some cases have been shown to be involved in multiple pathways. In this study we heterologously produced and biochemically characterized A. niger LraA and studied its expression on a set of monosaccharides. This revealed that, in contrast to other metabolic redox enzymes, LraA is highly specific for L-rhamnose and has no activity on most other substrates tested in this study. This specificity is matched by a highly specific expression profile, which only shows significant expression on L-rhamnose. It therefore can be concluded that LraA has evolved with a highly specific function in fungal sugar catabolism, unlike most other sugar reductases/dehydrogenases described so far. The high specificity of LraA also affects its biotechnological applications, as it may benefit L-rhamnose-based processes, but would be less suitable for applications involving conversion of multiple sugars. Full article
(This article belongs to the Section Fungal Cell Biology, Metabolism and Physiology)
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19 pages, 2127 KiB  
Article
Identification and Nutrient Composition of a Wild Pleurotus pulmonarius Strain from Tibet, and the Antioxidant and Cytotoxic Activities of Polysaccharides from This Fungus
by Hao Jiang, Lei Gao, Xin Hu, Junsheng Fu and Junli Zhang
Foods 2025, 14(7), 1198; https://doi.org/10.3390/foods14071198 - 28 Mar 2025
Cited by 1 | Viewed by 749
Abstract
The selection and breeding of high-quality wild edible fungal strains can bring significant economic and social benefits. A wild fungal strain (X21185) from the Tibetan Plateau was isolated and identified as a novel Pleurotus pulmonarius (P. pulmonarius) based on its morphological [...] Read more.
The selection and breeding of high-quality wild edible fungal strains can bring significant economic and social benefits. A wild fungal strain (X21185) from the Tibetan Plateau was isolated and identified as a novel Pleurotus pulmonarius (P. pulmonarius) based on its morphological and molecular characteristics. The appropriate culture conditions for P. pulmonarius were determined. The nutrient contents of P. pulmonarius fruiting bodies were analyzed. Compared with the conventional nutritional contents of the representative edible fungi (Pleurotus ostreatu and Pleurotus eryngii) and egg, the protein, ash, and dietary fiber contents of P. pulmonarius were higher. Four types of essential amino acids, seven types of nonessential amino acids, the total essential and nonessential amino acids of P. pulmonarius were present in considerably higher quantities than those of representative edible fungi (Pleurotus ostreatus and Pleurotus citrinopileatus) and egg, respectively. P. pulmonarius polysaccharides (PPPs) had strong ABTS+, DPPH, and hydroxyl free radical scavenging activities (EC50: 0.051, 3.322, and 2.87 mg/mL, respectively), and the cytotoxicity was higher against HepG2 hepatocellular carcinoma cells (IC50: 1.501 mg/mL) than against MDA-MB-468 triple-negative breast cancer cells (IC50: 2.183 mg/mL). This study provides a foundation for the development of the novel wild P. pulmonarius strain. Full article
(This article belongs to the Section Nutraceuticals, Functional Foods, and Novel Foods)
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35 pages, 1520 KiB  
Review
The Hidden Fortress: A Comprehensive Review of Fungal Biofilms with Emphasis on Cryptococcus neoformans
by Hope M. Pruitt, Jinyi C. Zhu, Sean P. Riley and Meiqing Shi
J. Fungi 2025, 11(3), 236; https://doi.org/10.3390/jof11030236 - 19 Mar 2025
Cited by 2 | Viewed by 4349
Abstract
Biofilms are structurally organized communities of microorganisms that adhere to a variety of surfaces. These communities produce protective matrices consisting of polymeric polysaccharides, proteins, nucleic acids, and/or lipids that promote shared resistance to various environmental threats, including chemical, antibiotic, and immune insults. While [...] Read more.
Biofilms are structurally organized communities of microorganisms that adhere to a variety of surfaces. These communities produce protective matrices consisting of polymeric polysaccharides, proteins, nucleic acids, and/or lipids that promote shared resistance to various environmental threats, including chemical, antibiotic, and immune insults. While algal and bacterial biofilms are more apparent in the scientific zeitgeist, many fungal pathogens also form biofilms. These surprisingly common biofilms are morphologically distinct from the multicellular molds and mushrooms normally associated with fungi and are instead an assemblage of single-celled organisms. As a collection of yeast and filamentous cells cloaked in an extracellular matrix, fungal biofilms are an extreme threat to public health, especially in conjunction with surgical implants. The encapsulated yeast, Cryptococcus neoformans, is an opportunistic pathogen that causes both pulmonary and disseminated infections, particularly in immunocompromised individuals. However, there is an emerging trend of cryptococcosis among otherwise healthy individuals. C. neoformans forms biofilms in diverse environments, including within human hosts. Notably, biofilm association correlates with increased expression of multiple virulence factors and increased resistance to both host defenses and antifungal treatments. Thus, it is crucial to develop novel strategies to combat fungal biofilms. In this review, we discuss the development and treatment of fungal biofilms, with a particular focus on C. neoformans. Full article
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15 pages, 3777 KiB  
Article
Quality Characteristics and Metabolomics Analysis of Two New Varieties of Tremella fuciformis
by Jianqiu Chen, Lingli Wei, Jiacheng Xie, Yuanyuan Zhang, Jiahui Jia, Liding Chen and Shujing Sun
Horticulturae 2025, 11(3), 273; https://doi.org/10.3390/horticulturae11030273 - 3 Mar 2025
Cited by 1 | Viewed by 939
Abstract
Tremella fuciformis Berk., also known as white fungus and snow fungus, is one of the important edible and medicinal mushrooms in China. The quality characteristics and metabolites of different T. fuciformis varieties directly affect the stability of their processed products. In this study, [...] Read more.
Tremella fuciformis Berk., also known as white fungus and snow fungus, is one of the important edible and medicinal mushrooms in China. The quality characteristics and metabolites of different T. fuciformis varieties directly affect the stability of their processed products. In this study, two new varieties of Tremella fuciformis, namely ’TYH-SD1’ (yellow) and ’TWH-SD2’ (white), which were obtained by the team through single-spore crossbreeding and its control varieties Tr21 (yellow) and Tr01 (white), were used as test materials. The characteristics and nutritional quality of the four varieties of substrates were comparatively analyzed, while metabolomics was employed to investigate the differences in flavor substances. The results demonstrate that TYH-SD1 and TWH-SD2 had a higher rehydration rate and faster rehydration speed compared with the control strains Tr21 and Tr01, with a smaller stem and higher yield. Notably, TWH-SD2 had a 29.06% increase in its rehydration rate and it had higher contents of crude polysaccharide and vitamin D3. The surface of TYH-SD1 ear pieces exhibited a porous structure with a larger pore size and the surface of TWH-SD2 ear pieces displayed a surface characterized by connected gully-like protrusions and fewer indentations, which were significantly different from that of Tr21 and Tr01 ear pieces. The textural analysis shows that TYH-SD1 and TWH-SD2 ear pieces were softer and more elastic, with greater cohesion and recovery, indicating that they had high tensile and deformation recovery ability. Metabolomics analysis revealed that the relative content of aldehydes in the volatile flavor substances TYH-SD1 and TWH-SD2 was high in n-alpha-aldehyde, nonanaldehyde, and n-pentanal. The relative content of alkanes in TYH-SD1 was second only to that of aldehydes, with decane having the highest content, contributing to its more almond aroma, fruity aroma, and fat aroma. TWH-SD2 exhibited the highest concentration of alcohols, accounting for 43.57%, which may result in a clear, mushroom, and lipid odor. The above results will provide theoretical basis for the further production, processing, and application of the new varieties. Full article
(This article belongs to the Special Issue Edible Mushrooms: Genetics, Genomics, and Breeding)
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18 pages, 7843 KiB  
Article
Biocontrol Activity of Alternaria angustiovoidea Against Trichothecium roseum Through Inhibiting Its Growth, Pathogenicity, and Gene Expression
by Xiuna Guo, Meiting Xu, Shaoli Wang, Wei Zhang and Baoyou Liu
Agronomy 2025, 15(3), 547; https://doi.org/10.3390/agronomy15030547 - 23 Feb 2025
Viewed by 817
Abstract
Apple mold heart disease, primarily caused by Trichothecium roseum, is the most severe disease affecting stored apples. Developing biocontrol resources as an alternative to chemical pesticides is crucial for the advancement of green agriculture. This study demonstrated that a pathogenic fungus isolated [...] Read more.
Apple mold heart disease, primarily caused by Trichothecium roseum, is the most severe disease affecting stored apples. Developing biocontrol resources as an alternative to chemical pesticides is crucial for the advancement of green agriculture. This study demonstrated that a pathogenic fungus isolated from sunflower leaves exhibited specific inhibitory effects against T. roseum. Through morphological observation, identification, and the construction of a phylogenetic tree analysis, the fungus was identified as Alternaria angustiovoidea. GW2A was found to inhibit the spread of diseases on apple twigs. Additionally, GW2A has significant preventive and therapeutic effects on apple mold heart disease. Furthermore, GW2A can induce apple trees to upregulate defense-related genes, thereby enhancing resistance. Transcriptome analysis revealed that GW2A inhibits T. roseum growth by suppressing the function of polysaccharide hydrolases, oxidoreductases, and intermediate steps in carbohydrate metabolism. In conclusion, our research has effectively isolated and characterized A. angustiovoidea, revealing its significant potential as a biocontrol agent against T. roseum and apple mold heart disease, particularly in areas where sunflowers and apple trees are not co-cultivated. Additionally, we demonstrated its ability to induce resistance in apple trees, offering a sustainable approach to disease management in apple cultivation. Full article
(This article belongs to the Section Pest and Disease Management)
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