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Keywords = enhanced differential evolution

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17 pages, 6072 KiB  
Article
Climate Warming-Driven Expansion and Retreat of Alpine Scree in the Third Pole over the Past 45 Years
by Guanshi Zhang, Bingfang Wu, Lingxiao Ying, Yu Zhao, Li Zhang, Mengru Cheng, Liang Zhu, Lu Zhang and Zhiyun Ouyang
Remote Sens. 2025, 17(15), 2611; https://doi.org/10.3390/rs17152611 - 27 Jul 2025
Abstract
Alpine scree, a distinctive plateau ecosystem, serves as habitat for numerous rare and endangered species. However, current research does not differentiate it from desert in terms of spatial boundary, hindering biodiversity conservation and ecological monitoring efforts. Using the Tibetan Plateau as a case [...] Read more.
Alpine scree, a distinctive plateau ecosystem, serves as habitat for numerous rare and endangered species. However, current research does not differentiate it from desert in terms of spatial boundary, hindering biodiversity conservation and ecological monitoring efforts. Using the Tibetan Plateau as a case study, we defined the spatial boundary of alpine scree based on its surface formation process and examined its distribution and long-term evolution. The results show that in 2020, alpine scree on the Tibetan Plateau covered 73,735.34 km2, 1.5 times the area of glaciers. Alpine scree is mostly distributed at elevations between 4000 and 6000 m, with a slope of approximately 30–40 degrees. Characterized by low temperature and sparse rainfall, the regions are located in the humid zone. From 1975 to 2020, the area of alpine scree initially increased before declining, with an overall decrease of 560.68 km2. Climate warming was the primary driver of these changes, leading to an increase in scree from 1975 to 1995 and a decrease in scree from 1995 to 2020. Additionally, between 1975 and 2020, the Tibetan Plateau’s grasslands shifted upward by 16.47 km2. This study enhances our understanding of the spatial distribution and dynamics of this unique ecosystem, alpine scree, offering new insights into climate change impacts on alpine ecosystems. Full article
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46 pages, 85624 KiB  
Article
ROS-Based Autonomous Driving System with Enhanced Path Planning Node Validated in Chicane Scenarios
by Mohamed Reda, Ahmed Onsy, Amira Y. Haikal and Ali Ghanbari
Actuators 2025, 14(8), 375; https://doi.org/10.3390/act14080375 - 27 Jul 2025
Abstract
In modern vehicles, Autonomous Driving Systems (ADSs) are designed to operate partially or fully without human intervention. The ADS pipeline comprises multiple layers, including sensors, perception, localization, mapping, path planning, and control. The Robot Operating System (ROS) is a widely adopted framework that [...] Read more.
In modern vehicles, Autonomous Driving Systems (ADSs) are designed to operate partially or fully without human intervention. The ADS pipeline comprises multiple layers, including sensors, perception, localization, mapping, path planning, and control. The Robot Operating System (ROS) is a widely adopted framework that supports the modular development and integration of these layers. Among them, the path-planning and control layers remain particularly challenging due to several limitations. Classical path planners often struggle with non-smooth trajectories and high computational demands. Meta-heuristic optimization algorithms have demonstrated strong theoretical potential in path planning; however, they are rarely implemented in real-time ROS-based systems due to integration challenges. Similarly, traditional PID controllers require manual tuning and are unable to adapt to system disturbances. This paper proposes a ROS-based ADS architecture composed of eight integrated nodes, designed to address these limitations. The path-planning node leverages a meta-heuristic optimization framework with a cost function that evaluates path feasibility using occupancy grids from the Hector SLAM and obstacle clusters detected through the DBSCAN algorithm. A dynamic goal-allocation strategy is introduced based on the LiDAR range and spatial boundaries to enhance planning flexibility. In the control layer, a modified Pure Pursuit algorithm is employed to translate target positions into velocity commands based on the drift angle. Additionally, an adaptive PID controller is tuned in real time using the Differential Evolution (DE) algorithm, ensuring robust speed regulation in the presence of external disturbances. The proposed system is practically validated on a four-wheel differential drive robot across six scenarios. Experimental results demonstrate that the proposed planner significantly outperforms state-of-the-art methods, ranking first in the Friedman test with a significance level less than 0.05, confirming the effectiveness of the proposed architecture. Full article
(This article belongs to the Section Control Systems)
15 pages, 1961 KiB  
Article
Age-Dependent Immune Defense Against Beauveria bassiana in Long- and Short-Lived Drosophila Populations
by Elnaz Bagheri, Han Yin, Arnie Lynn C. Bengo, Kshama Ekanath Rai, Taryn Conyers, Robert Courville, Mansour Abdoli, Molly K. Burke and Parvin Shahrestani
J. Fungi 2025, 11(8), 556; https://doi.org/10.3390/jof11080556 - 27 Jul 2025
Abstract
Aging in sexually reproducing organisms is shaped by the declining force of natural selection after reproduction begins. In Drosophila melanogaster, experimental evolution shows that altering the age of reproduction shifts the timing of aging. Using the Drosophila experimental evolution population (DEEP) resource, [...] Read more.
Aging in sexually reproducing organisms is shaped by the declining force of natural selection after reproduction begins. In Drosophila melanogaster, experimental evolution shows that altering the age of reproduction shifts the timing of aging. Using the Drosophila experimental evolution population (DEEP) resource, which includes long- and short- lived populations evolved under distinct reproductive schedules, we investigated how immune defense against Beauveria bassiana changes with age and evolved lifespan. We tested survival post-infection at multiple ages and examined genomic differentiation for immune-related genes. Both population types showed age-related declines in immune defense. Long-lived populations consistently exhibited age-specific defense when both long- and short-lived populations were tested. Genomic comparisons revealed thousands of differentiated loci, yet no enrichment for canonical immune genes or overlap with gene sets from studies of direct selection for immunity. These results suggest that enhanced immune defense can evolve alongside extended lifespan, likely via general physiological robustness rather than traditional immune pathways. A more detailed analysis may reveal that selection for lifespan favors tolerance-based mechanisms that reduce infection damage without triggering immune activation, in contrast to direct selection for resistance. Our findings demonstrate the utility of experimentally evolved populations for dissecting the genetic architecture of aging and immune defense to inform strategies to mitigate age-related costs associated with immune activation. Full article
(This article belongs to the Special Issue Advances in Research on Entomopathogenic Fungi)
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19 pages, 2201 KiB  
Article
Spatiotemporal Evolution and Driving Factors of Agricultural Digital Transformation in China
by Jinli Wang, Jun Wen, Jie Lin and Xingqun Li
Agriculture 2025, 15(15), 1600; https://doi.org/10.3390/agriculture15151600 - 25 Jul 2025
Viewed by 183
Abstract
With the digital economy continuing to integrate deeply into the agricultural sector, agricultural digital transformation has emerged as a pivotal driver of rural revitalization and the development of a robust agricultural economy. Although existing studies have affirmed the positive role of agricultural digital [...] Read more.
With the digital economy continuing to integrate deeply into the agricultural sector, agricultural digital transformation has emerged as a pivotal driver of rural revitalization and the development of a robust agricultural economy. Although existing studies have affirmed the positive role of agricultural digital transformation in promoting rural development and enhancing agricultural efficiency, its spatiotemporal evolution patterns, regional disparities, and underlying driving factors have not yet been systematically and thoroughly investigated. This study seeks to fill that gap. Based on provincial panel data from China spanning 2011 to 2023, this study employs the Theil index, kernel density estimation, Moran’s index, and quantile regression to systematically assess the spatiotemporal dynamics and driving factors of agricultural digital transformation at both national and regional levels. The results reveal a steady overall improvement in agricultural digital transformation, yet regional development imbalances remain prominent, with a shift from inter-regional disparities to intra-regional disparities over time. The four major regions exhibit a stratified evolutionary trajectory marked by internal differentiation: the eastern region retains its lead, while central and western regions show potential for catch-up, and the northeastern region faces a “balance trap.” Economic development foundation, human capital quality, and policy environment support are identified as the core driving forces of transformation, while other factors demonstrate pronounced regional and phase-specific variability. This study not only deepens theoretical understanding of the uneven development and driving logic of agricultural digital transformation but also provides empirical evidence to support policy optimization and promote more balanced and sustainable development in the agricultural sector. Full article
(This article belongs to the Section Agricultural Economics, Policies and Rural Management)
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22 pages, 16961 KiB  
Article
Highly Accelerated Dual-Pose Medical Image Registration via Improved Differential Evolution
by Dibin Zhou, Fengyuan Xing, Wenhao Liu and Fuchang Liu
Sensors 2025, 25(15), 4604; https://doi.org/10.3390/s25154604 - 25 Jul 2025
Viewed by 129
Abstract
Medical image registration is an indispensable preprocessing step to align medical images to a common coordinate system before in-depth analysis. The registration precision is critical to the following analysis. In addition to representative image features, the initial pose settings and multiple poses in [...] Read more.
Medical image registration is an indispensable preprocessing step to align medical images to a common coordinate system before in-depth analysis. The registration precision is critical to the following analysis. In addition to representative image features, the initial pose settings and multiple poses in images will significantly affect the registration precision, which is largely neglected in state-of-the-art works. To address this, the paper proposes a dual-pose medical image registration algorithm based on improved differential evolution. More specifically, the proposed algorithm defines a composite similarity measurement based on contour points and utilizes this measurement to calculate the similarity between frontal–lateral positional DRR (Digitally Reconstructed Radiograph) images and X-ray images. In order to ensure the accuracy of the registration algorithm in particular dimensions, the algorithm implements a dual-pose registration strategy. A PDE (Phased Differential Evolution) algorithm is proposed for iterative optimization, enhancing the optimization algorithm’s ability to globally search in low-dimensional space, aiding in the discovery of global optimal solutions. Extensive experimental results demonstrate that the proposed algorithm provides more accurate similarity metrics compared to conventional registration algorithms; the dual-pose registration strategy largely reduces errors in specific dimensions, resulting in reductions of 67.04% and 71.84%, respectively, in rotation and translation errors. Additionally, the algorithm is more suitable for clinical applications due to its lower complexity. Full article
(This article belongs to the Special Issue Recent Advances in X-Ray Sensing and Imaging)
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15 pages, 1111 KiB  
Article
Analytical Approximations as Close as Desired to Special Functions
by Aviv Orly
Axioms 2025, 14(8), 566; https://doi.org/10.3390/axioms14080566 - 24 Jul 2025
Viewed by 191
Abstract
We introduce a modern methodology for constructing global analytical approximations of special functions over their entire domains. By integrating the traditional method of matching asymptotic expansions—enhanced with Padé approximants—with differential evolution optimization, a modern machine learning technique, we achieve high-accuracy approximations using elegantly [...] Read more.
We introduce a modern methodology for constructing global analytical approximations of special functions over their entire domains. By integrating the traditional method of matching asymptotic expansions—enhanced with Padé approximants—with differential evolution optimization, a modern machine learning technique, we achieve high-accuracy approximations using elegantly simple expressions. This method transforms non-elementary functions, which lack closed-form expressions and are often defined by integrals or infinite series, into simple analytical forms. This transformation enables deeper qualitative analysis and offers an efficient alternative to existing computational techniques. We demonstrate the effectiveness of our method by deriving an analytical expression for the Fermi gas pressure that has not been previously reported. Additionally, we apply our approach to the one-loop correction in thermal field theory, the synchrotron functions, common Fermi–Dirac integrals, and the error function, showcasing superior range and accuracy over prior studies. Full article
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22 pages, 2985 KiB  
Review
Class IIa HDACs Are Important Signal Transducers with Unclear Enzymatic Activities
by Claudio Brancolini
Biomolecules 2025, 15(8), 1061; https://doi.org/10.3390/biom15081061 - 22 Jul 2025
Viewed by 123
Abstract
Class IIa histone deacetylases (HDACs) are pleiotropic regulators of various differentiation pathways and adaptive responses. They form complexes with other co-repressors and can bind to DNA by interacting with selected transcription factors, with members of the Myocyte Enhancer Factor-2 (MEF2) family being the [...] Read more.
Class IIa histone deacetylases (HDACs) are pleiotropic regulators of various differentiation pathways and adaptive responses. They form complexes with other co-repressors and can bind to DNA by interacting with selected transcription factors, with members of the Myocyte Enhancer Factor-2 (MEF2) family being the best characterized. A notable feature of class IIa HDACs is the substitution of tyrosine for histidine in the catalytic site, which has occurred over the course of evolution and has a profound effect on the efficiency of catalysis against acetyl-lysine. Another distinctive feature of this family of “pseudoenzymes” is the regulated nucleus–cytoplasm shuttling associated with several non-histone proteins that have been identified as potential substrates, including proteins localized in the cytosol. Within the complexity of class IIa HDACs, several aspects deserve further investigation. In the following, I will discuss some of the recent advances in our knowledge of class IIa HDACs. Full article
(This article belongs to the Special Issue Recent Advances in Chromatin and Chromosome Molecular Research)
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20 pages, 1487 KiB  
Article
Structural Evolution and Factors of the Electric Vehicle Lithium-Ion Battery Trade Network Among European Union Member States
by Liqiao Yang, Ni Shen, Izabella Szakálné Kanó, Andreász Kosztopulosz and Jianhao Hu
Sustainability 2025, 17(15), 6675; https://doi.org/10.3390/su17156675 - 22 Jul 2025
Viewed by 293
Abstract
As global climate change intensifies and the transition to clean energy accelerates, lithium-ion batteries—critical components of electric vehicles—are becoming increasingly vital in international trade networks. This study investigates the structural evolution and determinants of the electric vehicle lithium-ion battery trade network among European [...] Read more.
As global climate change intensifies and the transition to clean energy accelerates, lithium-ion batteries—critical components of electric vehicles—are becoming increasingly vital in international trade networks. This study investigates the structural evolution and determinants of the electric vehicle lithium-ion battery trade network among European Union (EU) member states from 2012 to 2023, employing social network analysis and the multiple regression quadratic assignment procedure method. The findings demonstrate the transformation of the network from a centralized and loosely connected structure, with Germany as the dominant hub, to a more interconnected and decentralized system in which Poland and Hungary emerge as the leading players. Key network metrics, such as the density, clustering coefficients, and average path lengths, reveal increased regional trade connectivity and enhanced supply chain efficiency. The analysis identifies geographic and economic proximity, logistics performance, labor cost differentials, energy resource availability, and venture capital investment as significant drivers of trade flows, highlighting the interaction among spatial, economic, and infrastructural factors in shaping the network. Based on these findings, this study underscores the need for targeted policy measures to support Central and Eastern European countries, including investment in logistics infrastructure, technological innovation, and regional cooperation initiatives, to strengthen their integration into the supply chain and bolster their export capacity. Furthermore, fostering balanced inter-regional collaborations is essential in building a resilient trade network. Continued investment in transportation infrastructure and innovation is recommended to sustain the EU’s competitive advantage in the global electric vehicle lithium-ion battery supply chain. Full article
(This article belongs to the Section Economic and Business Aspects of Sustainability)
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26 pages, 2688 KiB  
Article
Improved Parallel Differential Evolution Algorithm with Small Population for Multi-Period Optimal Dispatch Problem of Microgrids
by Tianle Li, Yifei Li, Fang Wang, Cheng Gong, Jingrui Zhang and Hao Ma
Energies 2025, 18(14), 3852; https://doi.org/10.3390/en18143852 - 19 Jul 2025
Viewed by 239
Abstract
Microgrids have drawn attention due to their helpfulness in the development of renewable energy. It is necessary to make an optimal power dispatch scheme for each micro-source in a microgrid in order to make the best use of fluctuating and unpredictable renewable energy. [...] Read more.
Microgrids have drawn attention due to their helpfulness in the development of renewable energy. It is necessary to make an optimal power dispatch scheme for each micro-source in a microgrid in order to make the best use of fluctuating and unpredictable renewable energy. However, the computational time of solving the optimal dispatch problem increases greatly when the grid’s structure is more complex. An improved parallel differential evolution (PDE) approach based on a message-passing interface (MPI) is proposed, aiming at the solution of the optimal dispatch problem of a microgrid (MG), reducing the consumed time effectively but not destroying the quality of the obtained solution. In the new approach, the main population of the parallel algorithm is divided into several small populations, and each performs the original operators of a differential evolution algorithm, i.e., mutation, crossover, and selection, in different processes concurrently. The gather and scatter operations are employed after several iterations to enhance population diversity. Some improvements on mutation, adaptive parameters, and the introduction of migration operation are also proposed in the approach. Two test systems are employed to verify and evaluate the proposed approach, and the comparisons with traditional differential evolution are also reported. The results show that the proposed PDE algorithm can reduce the consumed time on the premise of obtaining no worse solutions. Full article
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32 pages, 2992 KiB  
Article
An Inter-Regional Lateral Transshipment Model to Massive Relief Supplies with Deprivation Costs
by Shuanglin Li, Na Zhang and Jin Qin
Mathematics 2025, 13(14), 2298; https://doi.org/10.3390/math13142298 - 17 Jul 2025
Viewed by 312
Abstract
Massive relief supplies inter-regional lateral transshipment (MRSIRLT) can significantly enhance the efficiency of disaster response, meet the needs of affected areas (AAs), and reduce deprivation costs. This paper develops an integrated allocation and intermodality optimization model (AIOM) to address the MRSIRLT challenge. A [...] Read more.
Massive relief supplies inter-regional lateral transshipment (MRSIRLT) can significantly enhance the efficiency of disaster response, meet the needs of affected areas (AAs), and reduce deprivation costs. This paper develops an integrated allocation and intermodality optimization model (AIOM) to address the MRSIRLT challenge. A phased interactive framework incorporating adaptive differential evolution (JADE) and improved adaptive large neighborhood search (IALNS) is designed. Specifically, JADE is employed in the first stage to allocate the volume of massive relief supplies, aiming to minimize deprivation costs, while IALNS optimizes intermodal routing in the second stage to minimize the weighted sum of transportation time and cost. A case study based on a typhoon disaster in the Chinese region of Bohai Rim demonstrates and verifies the effectiveness and applicability of the proposed model and algorithm. The results and sensitivity analysis indicate that reducing loading and unloading times and improving transshipment efficiency can effectively decrease transfer time. Additionally, the weights assigned to total transfer time and costs can be balanced depending on demand satisfaction levels. Full article
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25 pages, 8705 KiB  
Review
A Systems Perspective on Material Stocks Research: From Quantification to Sustainability
by Tiejun Dai, Zhongchun Yue, Xufeng Zhang and Yuanying Chi
Systems 2025, 13(7), 587; https://doi.org/10.3390/systems13070587 - 15 Jul 2025
Viewed by 346
Abstract
Material stocks (MS) serve as essential physical foundations for socio–economic systems, reflecting the accumulation, transformation, and consumption of resources over time and space. Positioned at the intersection of environmental and socio–economic systems, MS are increasingly recognized as leverage points for advancing sustainability. However, [...] Read more.
Material stocks (MS) serve as essential physical foundations for socio–economic systems, reflecting the accumulation, transformation, and consumption of resources over time and space. Positioned at the intersection of environmental and socio–economic systems, MS are increasingly recognized as leverage points for advancing sustainability. However, there is currently a lack of comprehensive overview, making it difficult to fully capture the latest developments and cutting–edge research. We adopt a systems perspective to conduct a comprehensive bibliometric and thematic review of 602 scholarly publications on MS research. The results showed that MS research encompasses has three development periods: preliminary exploration (before 2007), rapid development (2007–2016), and expansion and deepening (after 2016). MS research continues to deepen, gathering multiple teams and differentiating into diverse topics. MS research has evolved from simple accounting to intersection with socio–economic, resources, and environmental systems, and shifted from relying on statistical data to integrating high–spatio–temporal–resolution geographic big data. MS research is shifting from problem revelation to problem solving, constantly achieving new developments and improvements. In the future, it is still necessary to refine MS spatio–temporal distribution, reveal MS’s evolution mechanism, establish standardized databases, strengthen interaction with other systems, enhance problem–solving abilities, and provide powerful guidance for the formulation of dematerialization and decarbonization policies to achieve sustainable development. Full article
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31 pages, 3869 KiB  
Article
Evolutionary Game Analysis of Credit Supervision for Practitioners in the Water Conservancy Construction Market from the Perspective of Indirect Supervision
by Shijian Du, Song Xue and Quanhua Qu
Buildings 2025, 15(14), 2470; https://doi.org/10.3390/buildings15142470 - 14 Jul 2025
Viewed by 164
Abstract
Credit supervision of practitioners in the water conservancy construction market, a vital pillar of national infrastructure development, significantly impacts project safety and the maintenance of order in the industry. From the perspective of indirect supervision, this study constructs a tripartite evolutionary game model [...] Read more.
Credit supervision of practitioners in the water conservancy construction market, a vital pillar of national infrastructure development, significantly impacts project safety and the maintenance of order in the industry. From the perspective of indirect supervision, this study constructs a tripartite evolutionary game model involving government departments, enterprises, and practitioners to analyze the dynamic evolution mechanism of credit supervision. By examining the strategic interactions among the three parties under different regulatory scenarios, we identify key factors influencing the stable equilibrium of evolution and verify the theoretical conclusions through numerical simulations. The study yields several key insights. First, while government regulation and social supervision can substantially increase the likelihood of practitioners’ integrity, relying solely on administrative regulation has an efficiency limit. Second, the effectiveness of the reward and punishment mechanism of the direct manager plays a crucial leveraging role in credit evolution. Lastly, under differentiated regulatory strategies, high-credit practitioners respond more strongly to long-term cost optimization, while low-credit practitioners are more effectively deterred by short-term, high-intensity disciplinary actions. Based on these findings, this study proposes a systematic governance framework of “regulatory model innovation–corporate responsibility enhancement–social supervision deepening.” Unlike previous studies, this framework adopts a comprehensive approach from three dimensions: regulatory model innovation, corporate responsibility enhancement, and social supervision deepening. It offers a more holistic and systematic solution for refining the credit system in the water conservancy construction market, providing both theoretical support and practical approaches. Full article
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16 pages, 3716 KiB  
Article
Genome-Wide Analysis of Oxidosqualene Cyclase Genes in Artemisia annua: Evolution, Expression, and Potential Roles in Triterpenoid Biosynthesis
by Changfeng Guo, Si Xu and Xiaoyun Guo
Curr. Issues Mol. Biol. 2025, 47(7), 545; https://doi.org/10.3390/cimb47070545 - 14 Jul 2025
Viewed by 305
Abstract
Plant triterpenoids are structurally diverse specialized metabolites with significant ecological, medicinal, and agricultural importance. Oxidosqualene cyclases (OSCs) catalyze the crucial cyclization step in triterpenoid biosynthesis, generating the fundamental carbon skeletons that determine their structural diversity and biological functions. Genome-wide identification of OSC genes [...] Read more.
Plant triterpenoids are structurally diverse specialized metabolites with significant ecological, medicinal, and agricultural importance. Oxidosqualene cyclases (OSCs) catalyze the crucial cyclization step in triterpenoid biosynthesis, generating the fundamental carbon skeletons that determine their structural diversity and biological functions. Genome-wide identification of OSC genes was performed using bioinformatics tools, including HMMER and BLASTP, followed by phylogenetic analysis, gene structure analysis, conserved domain and motifs identification, cis-regulatory element prediction, protein–protein interaction analysis, and expression profiling using publicly available transcriptome data from UV-B treated A. annua six-week-old seedlings. We identified 24 AaOSC genes, classified into CAS, LAS, LUS, and unknown subfamilies. Phylogenetic analysis revealed evolutionary relationships with OSCs from other plant species. Gene structure analysis showed variations in exon–intron organization. Promoter analysis identified cis-regulatory elements related to light responsiveness, plant growth and development, hormone signaling, and stress response. Expression profiling revealed differential expression patterns of AaOSC genes under UV-B irradiation. This genome-wide characterization provides insights into the evolution and functional diversification of the OSC gene family in A. annua. The identified AaOSC genes and their regulatory elements lay the foundation for future studies aimed at manipulating triterpenoid biosynthesis for medicinal and biotechnological applications, particularly focusing on enhancing stress tolerance and artemisinin production. Full article
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18 pages, 3194 KiB  
Article
Identification and Characterization of the Complete Genome of the TGF-β Gene Family in Tupaia belangeri: Expression and Function of Adipose Tissue Under Cold Acclimation Conditions
by Lijie Du, Wanlong Zhu and Lin Zhang
Int. J. Mol. Sci. 2025, 26(14), 6681; https://doi.org/10.3390/ijms26146681 - 11 Jul 2025
Viewed by 270
Abstract
The transforming growth factor beta (TGF-β) gene family is widely distributed across the animal kingdom, playing a crucial role in various cellular processes and maintaining overall health and homeostasis. The present study identified 34 TGF-β family genes based on the [...] Read more.
The transforming growth factor beta (TGF-β) gene family is widely distributed across the animal kingdom, playing a crucial role in various cellular processes and maintaining overall health and homeostasis. The present study identified 34 TGF-β family genes based on the genome sequence in Tupaia belangeri, which were classified into the TGF-β, bone morphogenetic protein (BMP), growth differentiation factor (GDF), glial cell-derived neurotrophic factor (GDNF), and Activin/Inhibin subfamilies. A phylogenetic analysis revealed the evolutionary relationships among members of the TGF-β family in T. belangeri and their homologous genes in Homo sapiens, Mus musculus, and Pan troglodytes, indicating a high degree of conservation throughout evolution. A chromosomal distribution and collinearity analysis demonstrated the localization of these genes within the genome of T. belangeri and their collinearity with genes from other species. A gene structure and motif analysis further illustrated the conservation and diversity among TGF-β family members. A protein interaction network analysis highlighted the central roles of TGFB1, TGFB3, BMP7, and BMP2 in signal transduction. A functional enrichment analysis underscored the significance of the TGF-β signaling pathway in the biological processes of T. belangeri, particularly in cell proliferation, differentiation, and apoptosis. We assessed the impact of cold acclimation treatment on the expression of TGF-β family proteins in the adipose tissue (white adipose tissue [WAT] and brown adipose tissue [BAT]) of T. belangeri using ELISA technology, finding that protein expression levels in the experimental group were significantly higher than those of in the control group. These results suggested that cold acclimation may enhance the adaptability of T. belangeri to cold environments by modulating the expression of TGF-β family genes. This study offers new insights into the role of the TGF-β family in the cold acclimation adaptation of T. belangeri, providing a scientific foundation for future genetic improvements and strategies for cold acclimation. Full article
(This article belongs to the Section Molecular Biology)
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26 pages, 4750 KiB  
Article
Service Composition and Optimal Selection for Industrial Software Integration with QoS and Availability
by Yangzhen Cao, Shanhui Liu, Chaoyang Li, Hongen Yang and Yuanyang Wang
Appl. Sci. 2025, 15(14), 7754; https://doi.org/10.3390/app15147754 - 10 Jul 2025
Viewed by 172
Abstract
To address the growing demand for industrial software in the digital transformation of small and medium-sized enterprises (SMEs) in the manufacturing sector, and to ensure the stable integration and operation of multi-source heterogeneous industrial software under complex conditions—such as heterogeneous compatibility, component dependencies, [...] Read more.
To address the growing demand for industrial software in the digital transformation of small and medium-sized enterprises (SMEs) in the manufacturing sector, and to ensure the stable integration and operation of multi-source heterogeneous industrial software under complex conditions—such as heterogeneous compatibility, component dependencies, and uncertainty disturbances—this study established a comprehensive evaluation index system for service composition and optimal selection (SCOS). The system incorporated key criteria including service time, service cost, service reputation, service delivery quality, and availability. Based on this, a bi-objective SCOS model was established with the goal of maximizing both quality of service (QoS) and availability. To efficiently solve the proposed model, a hybrid enhanced multi-objective Gray Wolf Optimizer (HEMOGWO) was developed. This algorithm integrated Tent chaotic mapping and a Levy flight-enhanced differential evolution (DE) strategy. Extensive experiments were conducted, including performance evaluation on 17 benchmark functions and case studies involving nine industrial software integration scenarios of varying scales. Comparative results against state-of-the-art, multi-objective, optimization algorithms—such as MOGWO, MOEA/D_DE, MOPSO, and NSGA-III—demonstrate the effectiveness and feasibility of the proposed approach. Full article
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