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22 Results Found

  • Feature Paper
  • Article
  • Open Access
19 Citations
7,571 Views
23 Pages

The Secretome and N-Glycosylation Profiles of the Charophycean Green Alga, Penium margaritaceum, Resemble Those of Embryophytes

  • Eliel Ruiz-May,
  • Iben Sørensen,
  • Zhangjun Fei,
  • Sheng Zhang and ,
  • David S. Domozych and
  • Jocelyn K. C. Rose
  • + 1 author+ 0 author

The secretome can be defined as the population of proteins that are secreted into the extracellular environment. Many proteins that are secreted by eukaryotes are N-glycosylated. However, there are striking differences in the diversity and conservati...

(This article belongs to the Special Issue Plant Proteomics 2017)
  • Article
  • Open Access
2 Citations
1,494 Views
13 Pages

5 August 2025

The plant-specific TCP transcription factor family originated before the emergence of land plants. However, the timing of the appearance of their specific transcriptional repressor family, the TCP Interactor containing EAR motif protein (TIE), remain...

(This article belongs to the Special Issue Plant Molecular Phylogenetics and Evolutionary Genomics III)
  • Article
  • Open Access
2 Citations
5,052 Views
21 Pages

Molecular Evolution of RAMOSA1 (RA1) in Land Plants

  • Carolina Bellino,
  • Fernando E. Herrera,
  • Daniel Rodrigues,
  • A. Sergio Garay and ,
  • Sofía V. Huck and
  • Renata Reinheimer
  • + 1 author+ 0 author

RAMOSA1 (RA1) is a Cys2-His2-type (C2H2) zinc finger transcription factor that controls plant meristem fate and identity and has played an important role in maize domestication. Despite its importance, the origin of RA1 is unknown, and the evolution...

(This article belongs to the Special Issue Molecular Plant Reproduction: From Cells to Nature)
  • Review
  • Open Access
72 Citations
8,785 Views
9 Pages

18 February 2019

Xylans with a variety of structures have been characterised in green algae, including chlorophytes (Chlorophyta) and charophytes (in the Streptophyta), and red algae (Rhodophyta). Substituted 1,4-β-d-xylans, similar to those in land plants (embr...

(This article belongs to the Special Issue Polysaccharides)
  • Article
  • Open Access
5 Citations
4,581 Views
22 Pages

An Ancestry Perspective of the Evolution of PBS1 Proteins in Plants

  • Edgar Yebrán Villegas-Vázquez,
  • Beatriz Xoconostle-Cázares and
  • Roberto Ruiz-Medrano

The AVRPPHB SUSCEPTIBLE1 (PBS1) and RESISTANCE TO PSEUDOMONAS SYRINGAE 5 (RPS5) proteins are involved in signal transduction to evoke innate plant immune response. In Arabidopsis, PBS1 is cleaved by the AvrPphB (Pseudomonas phaseolicola Avirulence pr...

(This article belongs to the Special Issue Plant Disease Resistance 2.0)
  • Article
  • Open Access
2 Citations
4,495 Views
20 Pages

18 March 2021

Mitochondria carry the remnant of an ancestral bacterial chromosome and express those genes with a system separate and distinct from the nucleus. Mitochondrial genes are transcribed as poly-cistronic primary transcripts which are post-transcriptional...

(This article belongs to the Special Issue Genetics, Genomics and Biotechnology of Plant Cytoplasmic Organelles)
  • Article
  • Open Access
25 Citations
7,159 Views
12 Pages

20 February 2017

Nearly all land plants post‐transcriptionally modify specific nucleotides within RNAs, a process known as RNA editing. This adaptation allows the correction of deleterious mutations within the asexually reproducing and presumably non‐recombinant chlo...

(This article belongs to the Section Plant Genetics and Genomics)
  • Data Descriptor
  • Open Access
2 Citations
5,842 Views
12 Pages

10 February 2017

The main objective of this paper is to present the herbarium of the Pontifical Catholic University of Parana’s and its collection. The history of the HUCP had its beginning in the middle of the 1970s with the foundation of the Biology Museum that gat...

  • Review
  • Open Access
12 Citations
5,369 Views
20 Pages

A Fossil Record of Spores before Sporophytes

  • Paul K. Strother and
  • Wilson A. Taylor

22 July 2024

Because their resistant, sporopolleninous walls preserve a record of morphogenetic change during spore formation, fossil cryptospores provide a direct physical record of the evolution of sporogenesis during the algal–plant transition. That tran...

(This article belongs to the Section Plant Diversity)
  • Review
  • Open Access
493 Views
25 Pages

Another Story of O: On the Origin of the Ovule

  • Günter Theißen and
  • Robin Schulz

11 October 2026

Explaining the mechanisms by which fundamental novelties originated in the history of life is a key goal of evolutionary developmental biology (evo-devo). Several attractive systems for study are provided by land plants (embryophytes), a monophyletic...

(This article belongs to the Section Plant Development and Morphogenesis)
  • Article
  • Open Access
24 Citations
5,837 Views
29 Pages

Genome-Wide Identification of the CrRLK1L Subfamily and Comparative Analysis of Its Role in the Legume-Rhizobia Symbiosis

  • Jorge Solis-Miranda,
  • Citlali Fonseca-García,
  • Noreide Nava,
  • Ronal Pacheco and
  • Carmen Quinto

14 July 2020

The plant receptor-like-kinase subfamily CrRLK1L has been widely studied, and CrRLK1Ls have been described as crucial regulators in many processes in Arabidopsis thaliana (L.), Heynh. Little is known, however, about the functions of these proteins in...

(This article belongs to the Special Issue Genetic Evolution of Root Nodule Symbioses)
  • Communication
  • Open Access
6 Citations
4,569 Views
10 Pages

On the Occurrence of Arbuscular Mycorrhizal Fungi in a Bryophyte Community of Punta Lara Natural Reserve, Buenos Aires, Argentina

  • Fabricio Emanuel Valdés,
  • Denilson Fernandes Peralta,
  • María Silvana Velázquez,
  • Fernanda Covacevich and ,
  • Alejandra Gabriela Becerra and
  • Marta Noemí Cabello
  • + 1 author+ 0 author

17 March 2023

The evolutionary history of the symbiotic association between arbuscular mycorrhizal fungi (AMF) and embryophytes dates back to the Devonian period. Previous ecological and physiological studies have described the presence of arbuscules, inter- and i...

(This article belongs to the Special Issue Diversity, Systematics and Evolution of Bryophytes)
  • Article
  • Open Access
17 Citations
4,554 Views
13 Pages

Evolution of the Small Family of Alternative Splicing Modulators Nuclear Speckle RNA-Binding Proteins in Plants

  • Leandro Lucero,
  • Jeremie Bazin,
  • Johan Rodriguez Melo,
  • Fernando Ibañez and ,
  • Martín D. Crespi and
  • Federico Ariel
  • + 1 author+ 0 author

18 February 2020

RNA-Binding Protein 1 (RBP1) was first identified as a protein partner of the long noncoding RNA (lncRNA) ENOD40 in Medicago truncatula, involved in symbiotic nodule development. RBP1 is localized in nuclear speckles and can be relocalized to the cyt...

(This article belongs to the Special Issue Genetic Evolution of Root Nodule Symbioses)
  • Article
  • Open Access
35 Citations
6,407 Views
19 Pages

At-Hook Motif Nuclear Localised Protein 18 as a Novel Modulator of Root System Architecture

  • Marek Širl,
  • Tereza Šnajdrová,
  • Dolores Gutiérrez-Alanís,
  • Joseph G. Dubrovsky and ,
  • Jean Phillipe Vielle-Calzada,
  • Ivan Kulich and
  • Aleš Soukup
  • + 2 authors+ 0 author

The At-Hook Motif Nuclear Localized Protein (AHL) gene family encodes embryophyte-specific nuclear proteins with DNA binding activity. They modulate gene expression and affect various developmental processes in plants. We identify AHL18 (At3G60870) a...

(This article belongs to the Special Issue Plant Cell and Organism Development)
  • Article
  • Open Access
14 Citations
5,457 Views
14 Pages

Phylogenomics Provides New Insights into Gains and Losses of Selenoproteins among Archaeplastida

  • Hongping Liang,
  • Tong Wei,
  • Yan Xu,
  • Linzhou Li and ,
  • Sunil Kumar Sahu,
  • Hongli Wang,
  • Haoyuan Li,
  • Xian Fu,
  • Gengyun Zhang and
  • Huan Liu
  • + 8 authors+ 3 authors

Selenoproteins that contain selenocysteine (Sec) are found in all kingdoms of life. Although they constitute a small proportion of the proteome, selenoproteins play essential roles in many organisms. In photosynthetic eukaryotes, selenoproteins have...

(This article belongs to the Section Molecular Genetics and Genomics)
  • Article
  • Open Access
20 Citations
10,208 Views
16 Pages

The colonization of land by streptophyte algae, ancestors of embryophyte plants, was a fundamental event in the history of life on earth. Bryophytes are early diversifying land plants that mark the transition from freshwater to terrestrial ecosystems...

(This article belongs to the Special Issue Molecular Mechanisms of Leaf Morphogenesis)
  • Brief Report
  • Open Access
7 Citations
3,071 Views
12 Pages

12 July 2023

Plant primary cell walls are composite structures surrounding the protoplast and containing pectins, hemicelluloses, and cellulose polysaccharides, as well as proteins. Their composition changed during the evolution of the green lineage from algae to...

  • Article
  • Open Access
36 Citations
7,760 Views
17 Pages

Brassinosteroids (BRs) are steroid hormones essential for different biological processes, ranging from growth to environmental adaptation in plants. The plant brassinosteroid-signaling kinase (BSK) proteins belong to a family of receptor-like cytopla...

(This article belongs to the Special Issue Plant Genomics 2019)
  • Article
  • Open Access
64 Citations
10,463 Views
13 Pages

Paired Hierarchical Organization of 13-Lipoxygenases in Arabidopsis

  • Adeline Chauvin,
  • Aurore Lenglet,
  • Jean-Luc Wolfender and
  • Edward E. Farmer

24 March 2016

Embryophyte genomes typically encode multiple 13-lipoxygenases (13-LOXs) that initiate the synthesis of wound-inducible mediators called jasmonates. Little is known about how the activities of these different LOX genes are coordinated. We found that...

(This article belongs to the Special Issue The Jasmonate Pathway)
  • Article
  • Open Access
2 Citations
1,391 Views
21 Pages

Large-Scale Multigenome-Wide Study Predicts the Existence of Transmembrane Phosphotransfer Proteins in Plant Multistep Phosphorelay Signaling Pathway

  • Sergey N. Lomin,
  • Wolfram G. Brenner,
  • Ekaterina M. Savelieva,
  • Dmitry V. Arkhipov and
  • Georgy A. Romanov

25 December 2025

A new class of plant phosphotransfer proteins belonging to the multistep phosphorelay (MSP) system implicated in phytohormone cytokinin signaling was discovered based on large-scale bioinformatics methods. Unlike the canonical soluble nucleo-cytosoli...

(This article belongs to the Special Issue Emerging Insights into Phytohormone Signaling in Plants)
  • Article
  • Open Access
13 Citations
3,852 Views
16 Pages

Genome-Wide Analysis of the LATERAL ORGAN BOUNDARIES Domain (LBD) Members in Alfalfa and the Involvement of MsLBD48 in Nitrogen Assimilation

  • Xu Jiang,
  • Huiting Cui,
  • Zhen Wang,
  • Junmei Kang and ,
  • Qingchuan Yang and
  • Changhong Guo
  • + 1 author+ 0 author

28 February 2023

The LATERAL ORGAN BOUNDARIES DOMAIN (LBD) proteins, a transcription factor family specific to the land plants, have been implicated in multiple biological processes including organ development, pathogen response and the uptake of inorganic nitrogen....

(This article belongs to the Topic Genetic Engineering in Agriculture)
  • Article
  • Open Access
659 Views
26 Pages

Mexican Plants in the 21st Century: A Synthesis of over Two Decades of Species Proposals (2000–2025)

  • Leonardo O. Alvarado-Cárdenas,
  • Carla Sofia Islas-Hernández,
  • Daniela Quintos Baez,
  • Claudia J. Ramírez-Díaz and ,
  • Sarahí Díaz Mota,
  • Cristóbal Sánchez-Sánchez,
  • Emilio Estrada-Ruiz,
  • Juan Fernando Pío-León,
  • Camilo Álvarez-Chacón and
  • Perla Velázquez-Ríos
  • + 10 authors+ 5 authors

8 October 2026

Mexico is a global hotspot for plant diversity, yet its floristic inventory remains incomplete. Understanding whether taxonomic discovery is advancing evenly is essential for guiding future work. Here, we ask what the taxonomic, geographic, and metho...

(This article belongs to the Section Plant Taxonomy)