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Keywords = crosses potency ratio

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28 pages, 8033 KB  
Review
The Application of Microfluidics in Traditional Chinese Medicine Research
by Shanxi Zhu, Xuanqi Ke, Yayuan Li, Zixuan Shu, Jiale Zheng, Zihan Xue, Wuzhen Qi and Bing Xu
Biosensors 2025, 15(12), 770; https://doi.org/10.3390/bios15120770 - 25 Nov 2025
Cited by 1 | Viewed by 2164
Abstract
Microfluidics enables precise manipulation of scarce Traditional Chinese Medicine (TCM) samples while accelerating analysis and enhancing sensitivity. Device-level structures explain these gains: staggered herringbone and serpentine mixers overcome low-Reynolds-number constraints to shorten diffusion distances and reduce incubation time; flow-focusing or T-junction droplet generators [...] Read more.
Microfluidics enables precise manipulation of scarce Traditional Chinese Medicine (TCM) samples while accelerating analysis and enhancing sensitivity. Device-level structures explain these gains: staggered herringbone and serpentine mixers overcome low-Reynolds-number constraints to shorten diffusion distances and reduce incubation time; flow-focusing or T-junction droplet generators create one-droplet–one-reaction compartments that suppress cross-talk and support high-throughput screening; “Christmas-tree” gradient generators deliver quantitative dosing landscapes for mechanism-aware assays; micropillar/weir arrays and nanostructured capture surfaces raise surface-to-volume ratios and probe density, improving capture efficiency and limits of detection; porous-membrane, perfused organ-on-a-chip architectures recreate apical–basolateral transport and physiological shear, enabling metabolism-aware pharmacology and predictive toxicology; wax-patterned paper microfluidics (µPADs) use capillary networks for instrument-free metering in field settings; and lab-on-a-disc radial channels/valves exploit centrifugal pumping for parallelised workflows. Framed by key performance indicators—sensitivity (LOD/LOQ), reliability/reproducibility, time-to-result, throughput, sample volume, and sustainability/cost—this review synthesises how such structures translate into value across TCM quality/safety control, toxicology, pharmacology, screening, and delivery. Emphasis on structure–function relationships clarifies where microfluidics most effectively closes gaps between chemical fingerprints and biological potency and indicates practical routes for standardisation and deployment. Full article
(This article belongs to the Special Issue Recent Advances in Biosensors for Pharmaceutical Analysis)
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16 pages, 2879 KB  
Article
The Association of HIV-1 Neutralization in Aviremic Children and Adults with Time to ART Initiation and CD4+/CD8+ Ratios
by Victor Sanchez-Merino, Miguel Martin-Serrano, Manuela Beltran, Beatriz Lazaro-Martin, Eloisa Cervantes, Manuel Oltra, Talia Sainz, Felipe Garcia, Maria Luisa Navarro and Eloisa Yuste
Vaccines 2024, 12(1), 8; https://doi.org/10.3390/vaccines12010008 - 20 Dec 2023
Cited by 2 | Viewed by 2448
Abstract
Broadly neutralizing antibodies (bnAbs) bind and neutralize diverse HIV isolates and demonstrate protective effects in primate models and humans against specific isolates. To develop an effective HIV vaccine, it is widely believed that inducing these antibodies is crucial. However, the high somatic hypermutation [...] Read more.
Broadly neutralizing antibodies (bnAbs) bind and neutralize diverse HIV isolates and demonstrate protective effects in primate models and humans against specific isolates. To develop an effective HIV vaccine, it is widely believed that inducing these antibodies is crucial. However, the high somatic hypermutation in bnAbs and the limited affinity of HIV Env proteins for bnAb germline precursors suggest that extended antigen exposure is necessary for their production. Consequently, HIV vaccine research is exploring complex sequential vaccination strategies to guide the immune response through maturation stages. In this context, the exploration of the factors linked to the generation of these antibodies across diverse age groups becomes critical. In this study, we assessed the anti-HIV-1 neutralization potency and breadth in 108 aviremic adults and 109 aviremic children under 15 years of age who were receiving ART. We used a previously described minipanel of recombinant viruses and investigated the factors associated with neutralization in these individuals. We identified individuals in both groups who were capable of neutralizing viruses from three different subtypes, with greater cross-neutralization observed in the adult group (49.0% vs. 9.2%). In both groups, we observed an inverse association between neutralization breadth and the CD4+/CD8+ ratio, as well as a direct association with the time to ART initiation. However, we found no association with time post-infection, cumulative ART duration, or CD8+ cell levels. The present study demonstrates that children receiving antiretroviral therapy generate broadly neutralizing responses to HIV-1, albeit with lower magnitude compared to adults. We also observed that neutralization breadth is associated with CD4+/CD8+ levels and time to treatment initiation in both children and adults living with HIV-1. Our interpretation of these results is that a delay in ART initiation could have prolonged the antigenic stimulation associated with viral replication and thus facilitate the capacity to elicit long-lasting broadly neutralizing responses. These results corroborate prior findings that show that HIV-1-neutralizing responses can persist for years, even at low antigen levels, implying an HIV-1 vaccine may induce lasting neutralizing antibody response. Full article
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17 pages, 3841 KB  
Article
Generation Mean Analysis, Heterosis, and Genetic Diversity in Five Egyptian Faba Beans and Their Hybrids
by Mohamed S. Abd El-Aty, Mahmoud A. El-Hity, Tharwat M. Abo Sen, Ibrahim A. E. Abd El-Rahaman, Omar M. Ibrahim, Ammar Al-Farga and Amira M. El-Tahan
Sustainability 2023, 15(16), 12313; https://doi.org/10.3390/su151612313 - 12 Aug 2023
Cited by 7 | Viewed by 4347
Abstract
The faba bean (Vicia faba L.) is a major legume crop; thus, it is important to apply various biometrical techniques to develop the most efficient breeding procedures to face biotic and abiotic stressors. During the four consecutive winter seasons of 2017–2021, five [...] Read more.
The faba bean (Vicia faba L.) is a major legume crop; thus, it is important to apply various biometrical techniques to develop the most efficient breeding procedures to face biotic and abiotic stressors. During the four consecutive winter seasons of 2017–2021, five populations of five faba bean hybrids were studied at Sakha agricultural research station in Egypt. Five basic generations, including two parents (P1 and P2) and the first, second, and third generations, were studied. This analysis found significant variations between generations in all attributes studied in all crosses (P1, P2, F1, F2, and F3). Sakha 4 was the earliest parent (138 days) based on the maturity date, whereas Giza 40 had the most significant number of pods and seeds per plant (25.68–78.94), and Giza 716 had the tallest plant height (124.00 cm). Giza 843 and Sakha 4 had the highest seed yield per plant values (62.84 g and 61.77 g). The data demonstrated highly substantial heterosis in the favorable direction over mid and better parents for all features, except for the number of branches in Cross 3 (Giza 40 × Giza 843) over mid and better parents and a maturity date in Cross 1 over mid parents. Contrarily, opposite-direction dominance and dominance × dominance effects increased narrow-sense heredity. Broad-sense heritability values for all examined characteristics were high in all crosses, ranging from 90.24% to 97.67%. In both Crosses 5 (Giza 716 × Qahera 4) and 3, genetic advance through selection ranged from 1.73% at the maturity date to 95.12% for seed yield per plant. Cross 3 (Giza 40 × Giza 843) had the greatest number of branches, pods, and seeds per plant. In conclusion, this study advances our understanding of employing faba beans in breeding programs. Full article
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22 pages, 5048 KB  
Article
An Iterative Filtering Based ECG Denoising Using Lifting Wavelet Transform Technique
by Shahid A. Malik, Shabir A. Parah, Hanan Aljuaid and Bilal A. Malik
Electronics 2023, 12(2), 387; https://doi.org/10.3390/electronics12020387 - 12 Jan 2023
Cited by 29 | Viewed by 5805
Abstract
This research article explores a hybrid strategy that combines an adaptive iterative filtering (IF) method and the fast discrete lifting-based wavelet transform (LWT) to eliminate power-line noise (PLI) and baseline wander from an electrocardiogram (ECG) signal. Due to its correct mathematical basis and [...] Read more.
This research article explores a hybrid strategy that combines an adaptive iterative filtering (IF) method and the fast discrete lifting-based wavelet transform (LWT) to eliminate power-line noise (PLI) and baseline wander from an electrocardiogram (ECG) signal. Due to its correct mathematical basis and its guaranteed a priori convergence, the iterative filtering approach was preferred over empirical mode decomposition (EMD). The noisy modes generated from the IF are fed to an LWT system so as to be disintegrated into the detail and the approximation coefficients. These coefficients are then scaled using a threshold method to generate a noise-free signal. The proposed strategy improves the quality and allows us to precisely preserve the vital components of the signal. The method’s potency has been established empirically by calculating the improvement in signal-to-noise ratio, cross-correlation coefficient and percent root-mean-square difference for different recordings available on the MIT-BIH arrhythmia database and then compared to numerous existing methods. Full article
(This article belongs to the Section Circuit and Signal Processing)
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12 pages, 1161 KB  
Article
Deciphering the Genetic Inheritance of Tocopherols in Indian Mustard (Brassica juncea L. Czern and Coss)
by Vijay Kamal Meena, Yashpal Taak, Rajat Chaudhary, Subhash Chand, Manoj Kumar Patel, Vignesh Muthusamy, Sangita Yadav, Navinder Saini, Sujata Vasudev and Devendra Kumar Yadava
Plants 2022, 11(13), 1779; https://doi.org/10.3390/plants11131779 - 5 Jul 2022
Cited by 6 | Viewed by 3392
Abstract
Tocopherol is vital for the nutritional value and stability of Indian mustard (Brassica juncea L. Czern and Coss) oil; nonetheless, the lack of information on genetic control is hampering its improvement. In this study, six populations (P1, P2, [...] Read more.
Tocopherol is vital for the nutritional value and stability of Indian mustard (Brassica juncea L. Czern and Coss) oil; nonetheless, the lack of information on genetic control is hampering its improvement. In this study, six populations (P1, P2, F1, F2, BC1P1, and BC1P2) of RLC3 × NPJ203 were evaluated in a family block design to evaluate the inheritance pattern, gene effects, and various other genetic parameters of tocopherol content (α, γ, and total), using generation mean analysis. The comparison of direct and reciprocal crosses indicated that the tocopherol content was not influenced by maternal inheritance. Negative directional heterosis showed that ATC, GTC, and TTC are governed by recessive genes. Potence ratio and degree of dominance highlighted an over-dominance type of gene interaction for GTC and TTC, whereas ATC was governed by epistatic interactions. Furthermore, the six-parameter model revealed a duplicate gene action for α-tocopherol content. Broad and narrow sense heritability coupled with genetic advances were high. Full article
(This article belongs to the Special Issue Development and Genetic Improvement in Brassica Crops)
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12 pages, 538 KB  
Brief Report
A Vaccine Based on the A/ASIA/G-VII Lineage of Foot-and-Mouth Disease Virus Offers Low Levels of Protection against Circulating Viruses from the A/ASIA/Iran-05 lineage
by Nagendrakumar Balasubramanian Singanallur, Phaedra Lydia Eblé, Anna Barbara Ludi, Bob Statham, Abdelghani Bin-Tarif, Donald P. King, Aldo Dekker and Wilna Vosloo
Viruses 2022, 14(1), 97; https://doi.org/10.3390/v14010097 - 6 Jan 2022
Cited by 15 | Viewed by 3997
Abstract
The recent emergence and circulation of the A/ASIA/G-VII (A/G-VII) lineage of foot-and-mouth disease virus (FMDV) in the Middle East has resulted in the development of homologous vaccines to ensure susceptible animals are sufficiently protected against clinical disease. However, a second serotype A lineage [...] Read more.
The recent emergence and circulation of the A/ASIA/G-VII (A/G-VII) lineage of foot-and-mouth disease virus (FMDV) in the Middle East has resulted in the development of homologous vaccines to ensure susceptible animals are sufficiently protected against clinical disease. However, a second serotype A lineage called A/ASIA/Iran-05 (A/IRN/05) continues to circulate in the region and it is therefore imperative to ensure vaccine strains used will protect against both lineages. In addition, for FMDV vaccine banks that usually hold a limited number of strains, it is necessary to include strains with a broad antigenic coverage. To assess the cross protective ability of an A/G-VII emergency vaccine (formulated at 43 (95% CI 8–230) PD50/dose as determined during homologous challenge), we performed a heterologous potency test according to the European Pharmacopoeia design using a field isolate from the A/IRN/05 lineage as the challenge virus. The estimated heterologous potency in this study was 2.0 (95% CI 0.4–6.0) PD50/dose, which is below the minimum potency recommended by the World Organisation for Animal Health (OIE). Furthermore, the cross-reactive antibody titres against the heterologous challenge virus were poor (≤log10 0.9), even in those cattle that had received the full dose of vaccine. The geometric mean r1-value was 0.2 (95% CI 0.03–0.8), similar to the potency ratio of 0.04 (95% CI 0.004–0.3). Vaccination decreased viraemia and virus excretion compared to the unvaccinated controls. Our results indicate that this A/G-VII vaccine does not provide sufficient protection against viruses belonging to the A/IRN/05 lineage and therefore the A/G-VII vaccine strain cannot replace the A/IRN/05 vaccine strain but could be considered an additional strain for use in vaccines and antigen banks. Full article
(This article belongs to the Special Issue Global Foot-and-Mouth Disease Control)
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18 pages, 2372 KB  
Article
Venomics of Trimeresurus (Popeia) nebularis, the Cameron Highlands Pit Viper from Malaysia: Insights into Venom Proteome, Toxicity and Neutralization of Antivenom
by Choo Hock Tan, Kae Yi Tan, Tzu Shan Ng, Evan S.H. Quah, Ahmad Khaldun Ismail, Sumana Khomvilai, Visith Sitprija and Nget Hong Tan
Toxins 2019, 11(2), 95; https://doi.org/10.3390/toxins11020095 - 6 Feb 2019
Cited by 46 | Viewed by 8749
Abstract
Trimeresurus nebularis is a montane pit viper that causes bites and envenomation to various communities in the central highland region of Malaysia, in particular Cameron’s Highlands. To unravel the venom composition of this species, the venom proteins were digested by trypsin and subjected [...] Read more.
Trimeresurus nebularis is a montane pit viper that causes bites and envenomation to various communities in the central highland region of Malaysia, in particular Cameron’s Highlands. To unravel the venom composition of this species, the venom proteins were digested by trypsin and subjected to nano-liquid chromatography-tandem mass spectrometry (LC-MS/MS) for proteomic profiling. Snake venom metalloproteinases (SVMP) dominated the venom proteome by 48.42% of total venom proteins, with a characteristic distribution of P-III: P-II classes in a ratio of 2:1, while P-I class was undetected. Snaclecs constituted the second most venomous protein family (19.43%), followed by snake venom serine proteases (SVSP, 14.27%), phospholipases A2 (5.40%), disintegrins (5.26%) and minor proteins including cysteine-rich secretory proteins, L-amino acid oxidases, phosphodiesterases, 5′-nucleotidases. The venomic profile correlates with local (painful progressive edema) and systemic (hemorrhage, coagulopathy, thrombocytopenia) manifestation of T. nebularis envenoming. As specific antivenom is unavailable for T. nebularis, the hetero-specific Thai Green Pit viper Monovalent Antivenom (GPVAV) was examined for immunological cross-reactivity. GPVAV exhibited good immunoreactivity to T. nebularis venom and the antivenom effectively cross-neutralized the hemotoxic and lethal effects of T. nebularis (lethality neutralizing potency = 1.6 mg venom per mL antivenom). The findings supported GPVAV use in treating T. nebularis envenoming. Full article
(This article belongs to the Section Animal Venoms)
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10 pages, 264 KB  
Article
Characterizing Permethrin and Etofenprox Resistance in Two Common Laboratory Strains of Anopheles gambiae (Diptera: Culicidae)
by Aaron D. Gross and Jeffrey R. Bloomquist
Insects 2018, 9(4), 146; https://doi.org/10.3390/insects9040146 - 22 Oct 2018
Cited by 8 | Viewed by 4351
Abstract
Anopheles gambiae Giles (Diptera: Culicidae) is the most prolific malaria vector in sub-Saharan Africa, where widespread insecticide resistance has been reported. An. gambiae laboratory strains are commonly used to study the basic biology of this important mosquito vector, and also in new insecticide [...] Read more.
Anopheles gambiae Giles (Diptera: Culicidae) is the most prolific malaria vector in sub-Saharan Africa, where widespread insecticide resistance has been reported. An. gambiae laboratory strains are commonly used to study the basic biology of this important mosquito vector, and also in new insecticide discovery programs, where insecticide-susceptible and -resistant strains are often used to screen new molecules for potency and cross-resistance, respectively. This study investigated the toxicity of permethrin, a Type-I pyrethroid insecticide, and etofenprox, a non-ester containing pyrethroid insecticide, against An. gambiae at three life stages. This characterization was performed with susceptible (G3; MRA-112) and resistant (Akdr; MRA-1280) An. gambiae strains; the Akdr strain is known to contain the L1014F mutation in the voltage-sensitive sodium channel. Surprisingly, etofenprox displays a lower level of resistance than permethrin against all stages of mosquitoes, except in a headless larval paralysis assay designed to minimize penetration factors. In first-instar An. gambiae larvae, permethrin had significant resistance, determined by the resistance ratio (RR50 = 5), but etofenprox was not significantly different (RR50 = 3.4) from the wild-type strain. Fourth-instar larvae displayed the highest level of resistance for permethrin (RR50 = 108) and etofenprox (RR50 = 35). Permethrin (PC50 = 2 ppb) and etofenprox (PC50 = 9 ppb) resulted in headless larval paralysis (5-h), but resistance, albeit lower, was still present for permethrin (RR50 = 5) and etofenprox (RR50 = 6.9). In adult female mosquitoes, permethrin displayed higher resistance (RR50 = 14) compared to etofenprox (RR50 = 4.3). The level of etofenprox resistance was different from that previously reported for a similar Akron An. gambiae laboratory strain (MRA-913). The chemical synergists piperonyl butoxide (PBO) and diethyl maleate (DEM) were able to synergize permethrin, but not etofenprox in the resistant strain (Akdr). In conclusion, multiple mechanisms are likely involved in pyrethroid resistance, but resistance profiles are dependent upon selection. Etofenprox is an effective insecticide against An. gambiae in the lab but will likely suffer from resistance in the field. Full article
(This article belongs to the Special Issue Integrative Mosquito Biology: From Molecules to Ecosystems)
17 pages, 560 KB  
Article
Spectral Inverse Quantum (Spectral-IQ) Method for Modeling Mesoporous Systems: Application on Silica Films by FTIR
by Ana-Maria Putz and Mihai V. Putz
Int. J. Mol. Sci. 2012, 13(12), 15925-15941; https://doi.org/10.3390/ijms131215925 - 28 Nov 2012
Cited by 65 | Viewed by 13549
Abstract
The present work advances the inverse quantum (IQ) structural criterion for ordering and characterizing the porosity of the mesosystems based on the recently advanced ratio of the particle-to-wave nature of quantum objects within the extended Heisenberg uncertainty relationship through employing the quantum fluctuation, [...] Read more.
The present work advances the inverse quantum (IQ) structural criterion for ordering and characterizing the porosity of the mesosystems based on the recently advanced ratio of the particle-to-wave nature of quantum objects within the extended Heisenberg uncertainty relationship through employing the quantum fluctuation, both for free and observed quantum scattering information, as computed upon spectral identification of the wave-numbers specific to the maximum of absorption intensity record, and to left-, right- and full-width at the half maximum (FWHM) of the concerned bands of a given compound. It furnishes the hierarchy for classifying the mesoporous systems from more particle-related (porous, tight or ionic bindings) to more wave behavior (free or covalent bindings). This so-called spectral inverse quantum (Spectral-IQ) particle-to-wave assignment was illustrated on spectral measurement of FT-IR (bonding) bands’ assignment for samples synthesized within different basic environment and different thermal treatment on mesoporous materials obtained by sol-gel technique with n-dodecyl trimethyl ammonium bromide (DTAB) and cetyltrimethylammonium bromide (CTAB) and of their combination as cosolvents. The results were analyzed in the light of the so-called residual inverse quantum information, accounting for the free binding potency of analyzed samples at drying temperature, and were checked by cross-validation with thermal decomposition techniques by endo-exo thermo correlations at a higher temperature. Full article
(This article belongs to the Special Issue Atoms in Molecules and in Nanostructures)
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