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24 pages, 978 KB  
Article
Assessment of Small-Settlement Wastewater Discharges on the Irtysh River Using Tracer-Based Mixing Diagnostics and Regularized Predictive Models
by Samal Anapyanova, Valentina Kolpakova, Monika Kulisz, Madina Nabiollina, Yuliya Yeremeyeva, Nailya Nurbayeva and Anvar Sherov
Water 2026, 18(2), 232; https://doi.org/10.3390/w18020232 - 15 Jan 2026
Abstract
An integrated field–analytical framework was applied to quantify the impact of two small-settlement treatment facilities (TF1 and TF2) on the Irtysh River (East Kazakhstan). The main objective of this study is to quantify effluent-driven dilution and non-conservative changes in key water-quality indicators downstream [...] Read more.
An integrated field–analytical framework was applied to quantify the impact of two small-settlement treatment facilities (TF1 and TF2) on the Irtysh River (East Kazakhstan). The main objective of this study is to quantify effluent-driven dilution and non-conservative changes in key water-quality indicators downstream of TF1 and TF2 and to evaluate parsimonious models for predicting effluent-outlet BOD and COD from upstream measurements. Paired upstream–downstream control sections are sampled in 2024–2025 for 22 indicators, and plant influent–effluent records are compiled for key wastewater variables. Chloride-based conservative mixing indicated very strong dilution (approximately D ≈ 2.0 × 103 for TF1 and D ≈ 4.2 × 102 for TF2). Deviations from the mixing line were summarized using a transformation diagnostic θ. At TF1, several constituents exceeded mixing expectations (θ ≈ 13 for COD, θ ≈ 42 for ammonium, and θ ≈ 6 for phosphates), while nitrate shows net attenuation θ < 0. At TF2, θ values cluster near unity, indicating modest deviations. Under a small-sample regime (N = 10) and leave-one-out validation, regularized regression provided accurate forecasts of effluent-outlet BOD and COD. Lasso under LOOCV performed best (BOD_after: RMSE = 0.626, MAE = 0.459, and R2 = 0.976; COD_after: RMSE = 0.795, MAE = 0.634, and R2 = 0.997). The results reconcile strong reach-scale dilution with constituent-specific local departures and support targeted modernization and operational forecasting for water-quality management in small facilities. Full article
(This article belongs to the Special Issue Eco-Engineered Solutions for Industrial Wastewater)
17 pages, 780 KB  
Article
Streamlining Wetland Vegetation Mapping with AlphaEarth Embeddings: Comparable Accuracy to Traditional Methods with Cleaner Maps and Minimal Preprocessing
by Shawn Ryan, Megan Powell, Joanne Ling and Li Wen
Remote Sens. 2026, 18(2), 293; https://doi.org/10.3390/rs18020293 - 15 Jan 2026
Abstract
Accurate mapping of wetland vegetation is essential for ecosystem monitoring and conservation planning. Traditional workflows combining Sentinel-1 SAR, Sentinel-2 optical imagery, and topographic data have advanced vegetation classification but require extensive preprocessing and often yield fragmented boundaries and “salt-and-pepper” noise. In this study, [...] Read more.
Accurate mapping of wetland vegetation is essential for ecosystem monitoring and conservation planning. Traditional workflows combining Sentinel-1 SAR, Sentinel-2 optical imagery, and topographic data have advanced vegetation classification but require extensive preprocessing and often yield fragmented boundaries and “salt-and-pepper” noise. In this study, we compare a conventional multi-sensor classification framework with a novel embedding-based approach derived from the AlphaEarth foundation model, using a cluster-guided Random Forest classifier applied to the dynamic wetland system of Narran Lake, New South Wales. Both approaches achieved high accuracy ac with test performance typically in the ranges: OA = 0.985–0.991, Cohen’s κ = 0.977–0.990, weighted F1 = 0.986–0.991, and MCC = 0.977–0.990. Embedding based maps showed markedly improved spatial coherence (lower edge density, local entropy, and patch fragmentation), producing smoother, ecologically consistent boundaries while requiring minimal preprocessing. Differences in class delineation were most evident in fire-affected and agricultural areas, where embeddings demonstrated greater resilience to spectral disturbance and post-fire variability. Although overall accuracies exceeded 0.98, these high values reflect the use of spectrally pure, homogeneous training samples rather than overfitting. The results highlight that embedding-driven methods can deliver cleaner, more interpretable vegetation maps with far less data preparation, underscoring their potential to streamline large-scale ecological monitoring and enhance the spatial realism of wetland mapping. Full article
(This article belongs to the Section Environmental Remote Sensing)
17 pages, 3431 KB  
Review
Conservation and Sustainable Development of Rice Landraces for Enhancing Resilience to Climate Change, with a Case Study of ‘Pantiange Heigu’ in China
by Shuyan Kou, Zhulamu Ci, Weihua Liu, Zhigang Wu, Huipin Peng, Pingrong Yuan, Cheng Jiang, Huahui Li, Elsayed Mansour and Ping Huang
Life 2026, 16(1), 143; https://doi.org/10.3390/life16010143 - 15 Jan 2026
Abstract
Climate change poses a threat to global rice production by increasing the frequency and intensity of extreme weather events. The widespread cultivation of genetically uniform modern varieties has narrowed the genetic base of rice, increasing its vulnerability to these increased pressures. Rice landraces [...] Read more.
Climate change poses a threat to global rice production by increasing the frequency and intensity of extreme weather events. The widespread cultivation of genetically uniform modern varieties has narrowed the genetic base of rice, increasing its vulnerability to these increased pressures. Rice landraces are traditional rice varieties that have been cultivated by farming communities for centuries and are considered crucial resources of genetic diversity. These landraces are adapted to a wide range of agro-ecological environments and exhibit valuable traits that provide tolerance to various biotic stresses, including drought, salinity, nutrient-deficient soils, and the increasing severity of climate-related temperature extremes. In addition, many landraces possess diverse alleles associated with resistance to biotic stresses, including pests and diseases. In addition, rice landraces exhibit great grain quality characters including high levels of essential amino acids, antioxidants, flavonoids, vitamins, and micronutrients. Hence, their preservation is vital for maintaining agricultural biodiversity and enhancing nutritional security, especially in vulnerable and resource-limited regions. However, rice landraces are increasingly threatened by genetic erosion due to widespread adoption of modern high-yielding varieties, habitat loss, and changing farming practices. This review discusses the roles of rice landraces in developing resilient and climate-smart rice cultivars. Moreover, the Pantiange Heigu landrace, cultivated at one of the highest altitudes globally in Yunnan Province, China, has been used as a case study for integrated conservation by demonstrating the successful combination of in situ and ex situ strategies, community engagement, policy support, and value-added development to sustainably preserve genetic diversity under challenging environmental and socio-economic challenges. Finally, this study explores the importance of employing advanced genomic technologies with supportive policies and economic encouragements to enhance conservation and sustainable development of rice landraces as a strategic imperative for global food security. By preserving and enhancing the utilization of rice landraces, the agricultural community can strengthen the genetic base of rice, improve crop resilience, and contribute substantially to global food security and sustainable agricultural development in the face of environmental and socio-economic challenges. Full article
(This article belongs to the Section Plant Science)
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21 pages, 3713 KB  
Article
The Potential of Material and Product Passports for the Circular Management of Heritage Buildings
by Antonella Violano, Roxana Georgiana Aenoai, Genesis Camila Cervantes Puma and Luís Bragança
Appl. Sci. 2026, 16(2), 865; https://doi.org/10.3390/app16020865 - 14 Jan 2026
Abstract
Interventions on Heritage Buildings (HBs) involve significant challenges due to their tangible (embodied in the material, architectural, physical and technical integrity of the cultural asset), and intangible values (linked to socio-historical–cultural and collective identity, memory, customs and symbols meanings), which must be preserved [...] Read more.
Interventions on Heritage Buildings (HBs) involve significant challenges due to their tangible (embodied in the material, architectural, physical and technical integrity of the cultural asset), and intangible values (linked to socio-historical–cultural and collective identity, memory, customs and symbols meanings), which must be preserved while also adapting to current sustainability and circular economy goals. However, current conservation and management practices often lack systematic tools to trace, assess, and organise material and component information, hindering the implementation of circular strategies. In line with the European Union’s objectives for climate neutrality and resource efficiency and sufficiency, Material and Product Passports (MPPs) have emerged as digital tools that enhance data traceability, interoperability and transparency throughout a building’s lifecycle. This paper examines the potential of MPPs to support circular management of HBs by analysing the structure of MPPs and outlining the information flows generated by rehabilitation, maintenance and adaptive reuse strategies. A mixed methods approach, combining literature review and data structure analysis, is adopted to identify how the different categories of data produced during maintenance, rehabilitation and adaptive reuse processes can be integrated into MPP modules. The research highlights the conceptual opportunities of MPPs to document and interlink historical, cultural, and technical data, thereby improving decision-making and transparency across intervention stages. The analysis suggests that adapting MPPs to the specificities of historic contexts, such as authenticity preservation, reversibility, and contextual sensitivity, can foster innovative, sustainable, and circular practices in the conservation and management of HBs. Full article
(This article belongs to the Special Issue Heritage Buildings: Latest Advances and Prospects)
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20 pages, 6238 KB  
Article
Transcriptional and Metabolic Networks Underlying Melanin Deposition in Silkie Chicken Muscle: A Multi-Omics Insights
by Yuxian Pan, Lin Zhang, Xin Yue, Zhen Sun, Huaiyong Zhang, Xuemeng Si, Rui Zheng, Wen Chen, Meng Zhang and Yanqun Huang
Animals 2026, 16(2), 252; https://doi.org/10.3390/ani16020252 - 14 Jan 2026
Abstract
Silkie (SK) chickens, valued for dark meat, serve as a model to study melanin deposition in muscle. Integrated transcriptomics and metabolomics of SK vs. Arbor Acres (AA) broiler pectoralis were used to identify key molecular drivers of meat color. All birds were cage-raised [...] Read more.
Silkie (SK) chickens, valued for dark meat, serve as a model to study melanin deposition in muscle. Integrated transcriptomics and metabolomics of SK vs. Arbor Acres (AA) broiler pectoralis were used to identify key molecular drivers of meat color. All birds were cage-raised under standardized temperature and light conditions with free access to feed and water. Pectoralis muscle samples were collected from 24-day-old healthy SK and AA chickens (n = 6). Transcriptome profiling identified 488 differentially expressed genes in SK chickens, with seven conserved melanogenesis genes (TYRP1, MLANA, TYR, MLPH, EDNRB2, PMEL, GPNMB) consistently upregulated across dark-pectoralis breeds, and melanogenesis and WNT pathways were activated. Co-expression network analysis highlighted SOX10 as a key hub regulator. Metabolomics quantified 129 differentially abundant metabolites. A critical finding was the significant depletion of L-tyrosine and its derivatives in SK muscle, despite upregulated melanogenesis genes. It indicates intense metabolic flux toward pigment synthesis. Integrated analyses converged on tyrosine metabolism and redox pathways: oxidized glutathione and p-coumaric acid correlated negatively with pigment deposition, while ADP-ribose and pyridoxal correlated positively. Additionally, novel inhibitors PNMT and HIBADH may modulate melanin deposition. These findings reveal a trade-off between pigment deposition and redox balance, providing molecular markers for poultry melanin-related trait improvement. Full article
(This article belongs to the Special Issue Livestock and Poultry Genetics and Breeding Management)
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23 pages, 5209 KB  
Article
Genome-Wide Identification and Expression Analysis of the Hsp70 Gene Family in Hylocereus undatus Seedlings Under Heat Shock Stress
by Youjie Liu, Ke Wen, Hanyao Zhang, Xiuqing Wei, Liang Li, Ping Zhou, Yajun Tang, Dong Yu, Yueming Xiong and Jiahui Xu
Int. J. Mol. Sci. 2026, 27(2), 816; https://doi.org/10.3390/ijms27020816 - 14 Jan 2026
Abstract
Hylocereus undatus growth is limited by long-term heat stress, and heat shock protein 70 (Hsp70) is crucial in the plant’s heat stress (HS) response. In a previous study, transcriptomic data revealed that Hsp70 family members in pitaya seedlings respond to temperature changes. This [...] Read more.
Hylocereus undatus growth is limited by long-term heat stress, and heat shock protein 70 (Hsp70) is crucial in the plant’s heat stress (HS) response. In a previous study, transcriptomic data revealed that Hsp70 family members in pitaya seedlings respond to temperature changes. This study identified 27 HuHsp70 genes in pitaya, analyzed their physicochemical properties (such as molecular weight and isoelectric point), and divided them into five subfamilies with conserved gene structures, motifs (short conserved sequence patterns), and cis-acting elements (regulatory DNA sequences). The Ks value (synonymous substitution rate) ranged from 0.93~3.54, and gene duplication events occurred between 71.17 and 272.19 million years ago (Mya). Under HS, eight and nine differentially expressed genes (DEGs) were detected at 24 h and 48 h, respectively. Quantitative real-time PCR (qRT-PCR, a method for measuring gene expression) verified the expression trends, with HuHsp70-11 expression increasing with heat shock duration, indicating that HuHsp70-11 is a key candidate. Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) analyses revealed that HuHsp70s, especially HuHsp70-11, play key roles in responding to high temperatures (HT) in H. undatus seedlings. A potential model by which HuHsp70-11 removes excess reactive oxygen species (ROS) and enhances cell membrane permeability was constructed. These results provide new perspectives for exploring the HS response mechanisms and adaptability of H. undatus plants to heat stress. Full article
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17 pages, 3201 KB  
Article
Efficacy of B-TACE Versus C-TACE and Potential Predictive Value of Intraoperative Balloon-Occluded Stump Pressure in HCC
by Liting Shan, Zhuoyang Fan, Guowei Yang, Sheng Qian, Wei Zhang, Bo Zhou and Rong Liu
J. Clin. Med. 2026, 15(2), 668; https://doi.org/10.3390/jcm15020668 - 14 Jan 2026
Abstract
Objectives: To compare the therapeutic efficacy and safety of balloon-assisted transarterial chemoembolization (B-TACE) versus conventional TACE (C-TACE) in hepatocellular carcinoma (HCC) and to evaluate the potential predictive value of intraoperative balloon-occluded arterial stump pressure (Boasp). Methods: In this prospective, single-centre, randomized controlled study, [...] Read more.
Objectives: To compare the therapeutic efficacy and safety of balloon-assisted transarterial chemoembolization (B-TACE) versus conventional TACE (C-TACE) in hepatocellular carcinoma (HCC) and to evaluate the potential predictive value of intraoperative balloon-occluded arterial stump pressure (Boasp). Methods: In this prospective, single-centre, randomized controlled study, 60 patients with hepatocellular carcinoma were allocated to either the B-TACE group (n = 30) or the C-TACE group (n = 30). One patient in the B-TACE group was lost to follow-up after allocation. The primary analyses were conducted according to the intention-to-treat (ITT) principle, including all randomized patients, with conservative handling of missing data. Sensitivity analyses were performed to assess the robustness of the results. Tumor response and survival outcomes were evaluated using the modified Response Evaluation Criteria in Solid Tumors (mRECIST) and Cox proportional hazards regression models. Intraoperative balloon-occluded arterial stump pressure (BOASP) was measured as an exploratory parameter to quantify embolization adequacy. Adverse events (AEs) were systematically assessed and graded according to the Common Terminology Criteria for Adverse Events (CTCAE), version 5.0. Results: TACE achieved a higher 3-month ORR (63.3% vs. 10.0%, p < 0.001) and 6-month disease control rates (80.0% vs. 36.7%, p < 0.001), with PFS (HR = 0.30, 95% CI 0.148–0.608) and procedures within 6 months (1 vs. 3, p < 0.001). The 6-month surgical conversion rate was higher (34.5% vs. 6.7%, p = 0.009). Changes in Boasp correlated with efficacy (AUC = 0.825, p = 0.0398). Severe infections were lower in B-TACE (17.2% vs. 76.7%, p < 0.001). Conclusions: B-TACE offers superior efficacy, survival, and surgical conversion versus C-TACE with favorable safety. Boasp provides a quantitative biomarker for predicting treatment response. Full article
(This article belongs to the Section Gastroenterology & Hepatopancreatobiliary Medicine)
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25 pages, 504 KB  
Article
The Effect of Economic Policy Uncertainty on Banks: Distinguishing Short- and Long-Term Effects
by Badar Nadeem Ashraf and Ningyu Qian
Risks 2026, 14(1), 18; https://doi.org/10.3390/risks14010018 - 13 Jan 2026
Viewed by 26
Abstract
The interplay between government economic policy uncertainty (EPU) and bank risk remains a key concern in the financial stability literature. This study advances the field by examining the dynamic, time-varying impact of EPU on bank risk, explicitly differentiating between short- and long-term effects. [...] Read more.
The interplay between government economic policy uncertainty (EPU) and bank risk remains a key concern in the financial stability literature. This study advances the field by examining the dynamic, time-varying impact of EPU on bank risk, explicitly differentiating between short- and long-term effects. We posit a dual hypothesis: heightened EPU increases short-run bank risk by raising borrower default probabilities while decreasing long-run risk as banks adopt more conservative lending strategies, given the option value of waiting under high uncertainty. Analyzing bank-level data across 22 countries from 1998 to 2017, we find robust empirical support: EPU exerts an immediate positive effect on bank risk and a significant negative effect with a lag of two to four years. These findings are robust to endogeneity and multiple sensitivity checks. Our results explicitly demonstrate the dual role of policy uncertainty in shaping bank risk-taking and offer timely guidance for the design of regulatory and macroprudential frameworks. Full article
33 pages, 17231 KB  
Article
Comparative Chloroplast Genomics of Acanthaceae with a Focus on Medicinal Plant Thunbergia grandiflora Roxb.: Unveiling Adaptive Evolution, Diversification Mechanisms and Phylogenetic Relationships
by Yanlin Zhao, Wei Wu, Jinzhi Chen, Qingqing Lin, Chang An, Guoqiang Chen, Yanfang Zheng, Mingqing Huang and Yanxiang Lin
Biology 2026, 15(2), 137; https://doi.org/10.3390/biology15020137 - 13 Jan 2026
Viewed by 34
Abstract
The medicinally and ornamentally valuable genus Thunbergia faces taxonomic uncertainty, while certain Acanthaceae species are threatened by habitat loss, underscoring the need for chloroplast genome studies to support conservation efforts. The chloroplast genome of Thunbergia grandiflora was sequenced and assembled. Additionally, 28 Acanthaceae [...] Read more.
The medicinally and ornamentally valuable genus Thunbergia faces taxonomic uncertainty, while certain Acanthaceae species are threatened by habitat loss, underscoring the need for chloroplast genome studies to support conservation efforts. The chloroplast genome of Thunbergia grandiflora was sequenced and assembled. Additionally, 28 Acanthaceae species with significant medicinal value were selected for comparative genomic analysis. Based on the chloroplast genome data of Acanthaceae species, this study conducted phylogenetic and comparative evolutionary analyses. The results preliminarily support a systematic framework that divides Acanthaceae into eight tribes within five subfamilies. Concurrently, the study revealed significant inverted repeat (IR) region structural variations. A clear correspondence was observed between the contraction of IR length and the topological structure of the phylogenetic tree. In particular, species within the genus Strobilanthes exhibited significant contraction in their IR regions, which corresponded consistently with their tendency to cluster into an independent clade in the phylogenetic tree. This suggests that structural variation in the IR regions may be closely associated with the evolutionary divergence of this group. SSR analysis revealed a prevalent mononucleotide A/T repeat dominant pattern across Acanthaceae species. Furthermore, selection pressure analysis detected positive selection acting on multiple key genes, including rbcL, rps3, rps12, cemA, and ycf4, suggesting that these genes may play important roles in the adaptive evolution of Acanthaceae. This study reveals that the chloroplast genomes of Acanthaceae exhibit distinctive characteristics in phylogenetic architecture, dynamic variations in IR regions, and adaptive evolution of key genes, providing important molecular insights for understanding the mechanisms underlying species diversity and for the conservation of medicinal resources within this family. Full article
(This article belongs to the Special Issue Young Researchers in Conservation Biology and Biodiversity)
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24 pages, 5237 KB  
Article
DCA-UNet: A Cross-Modal Ginkgo Crown Recognition Method Based on Multi-Source Data
by Yunzhi Guo, Yang Yu, Yan Li, Mengyuan Chen, Wenwen Kong, Yunpeng Zhao and Fei Liu
Plants 2026, 15(2), 249; https://doi.org/10.3390/plants15020249 - 13 Jan 2026
Viewed by 29
Abstract
Wild ginkgo, as an endangered species, holds significant value for genetic resource conservation, yet its practical applications face numerous challenges. Traditional field surveys are inefficient in mountainous mixed forests, while satellite remote sensing is limited by spatial resolution. Current deep learning approaches relying [...] Read more.
Wild ginkgo, as an endangered species, holds significant value for genetic resource conservation, yet its practical applications face numerous challenges. Traditional field surveys are inefficient in mountainous mixed forests, while satellite remote sensing is limited by spatial resolution. Current deep learning approaches relying on single-source data or merely simple multi-source fusion fail to fully exploit information, leading to suboptimal recognition performance. This study presents a multimodal ginkgo crown dataset, comprising RGB and multispectral images acquired by an UAV platform. To achieve precise crown segmentation with this data, we propose a novel dual-branch dynamic weighting fusion network, termed dual-branch cross-modal attention-enhanced UNet (DCA-UNet). We design a dual-branch encoder (DBE) with a two-stream architecture for independent feature extraction from each modality. We further develop a cross-modal interaction fusion module (CIF), employing cross-modal attention and learnable dynamic weights to boost multi-source information fusion. Additionally, we introduce an attention-enhanced decoder (AED) that combines progressive upsampling with a hybrid channel-spatial attention mechanism, thereby effectively utilizing multi-scale features and enhancing boundary semantic consistency. Evaluation on the ginkgo dataset demonstrates that DCA-UNet achieves a segmentation performance of 93.42% IoU (Intersection over Union), 96.82% PA (Pixel Accuracy), 96.38% Precision, and 96.60% F1-score. These results outperform differential feature attention fusion network (DFAFNet) by 12.19%, 6.37%, 4.62%, and 6.95%, respectively, and surpasses the single-modality baselines (RGB or multispectral) in all metrics. Superior performance on cross-flight-altitude data further validates the model’s strong generalization capability and robustness in complex scenarios. These results demonstrate the superiority of DCA-UNet in UAV-based multimodal ginkgo crown recognition, offering a reliable and efficient solution for monitoring wild endangered tree species. Full article
(This article belongs to the Special Issue Advanced Remote Sensing and AI Techniques in Agriculture and Forestry)
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25 pages, 5666 KB  
Article
Ecosystem Service-Based Eco-Efficiency of Cultivated Land Use in Plateau Lake Regions: Spatial Dynamics and Nonlinear Drivers
by Ruijia Wang, Qiuchen Hong, Zonghan Zhang, Shuyu Zhou, Jinmin Hao and Dong Ai
Agriculture 2026, 16(2), 203; https://doi.org/10.3390/agriculture16020203 - 13 Jan 2026
Viewed by 34
Abstract
Plateau lake regions face escalating conflicts between food production and ecosystem conservation under rapid urbanization and strict ecological regulation. However, existing evaluations often overlook the positive ecosystem services generated by cultivated land and fail to capture the nonlinear mechanisms shaping eco-efficiency of cultivated [...] Read more.
Plateau lake regions face escalating conflicts between food production and ecosystem conservation under rapid urbanization and strict ecological regulation. However, existing evaluations often overlook the positive ecosystem services generated by cultivated land and fail to capture the nonlinear mechanisms shaping eco-efficiency of cultivated land use (ECLU). This study develops an ecosystem service-based framework to assess the ECLU of Kunming, a typical plateau lake-basin city in southwest China, from 2005 to 2022. Ecosystem service value (ESV) is incorporated as a desirable output within a super-efficiency SBM model, and an XGBoost–SHAP approach is applied to identify the intensity, nonlinear thresholds and interaction mechanisms. Results show an average ECLU of 1.12 with a fluctuating downward trend and widening spatial disparities. High-efficiency zones cluster in central–southern regions, while urbanizing cores experience ecological function degradation despite productivity gains. Cultivated land fragmentation is the dominant barrier, with a critical threshold of 31.90 mu, and fertilizer intensity turns detrimental beyond 0.19 t/ha. Urbanization exhibits an inverted-U pattern—initially suppressive (<35%), promotional (35–55%), and suppressive again (>55%)—with the promotion phase weakened by approximately 67% under severe fragmentation. Globally, threshold-based zoning and fragmentation mitigation must precede fertilizer optimization to ensure synergistic benefits. Full article
(This article belongs to the Section Ecosystem, Environment and Climate Change in Agriculture)
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17 pages, 1247 KB  
Article
Morphometric Relations Within Elasmobranch Species from the Amvrakikos Gulf (Central Mediterranean)
by Martina Ciprian, Ioannis Giovos, Carlotta Mazzoldi and Dimitrios K. Moutopoulos
Diversity 2026, 18(1), 41; https://doi.org/10.3390/d18010041 - 13 Jan 2026
Viewed by 40
Abstract
Despite their ecological and conservation significance, morphometric relations remain scarce for elasmobranch species in the Mediterranean. This study examined morphometric parameters of the eight elasmobranch species (one shark and seven batoids) presented in the Amvrakikos Gulf that has been designated as a National [...] Read more.
Despite their ecological and conservation significance, morphometric relations remain scarce for elasmobranch species in the Mediterranean. This study examined morphometric parameters of the eight elasmobranch species (one shark and seven batoids) presented in the Amvrakikos Gulf that has been designated as a National Park. A total of 1247 specimens were sampled between 2022 and 2025, caught by small-scale fishing vessels using trammel nets, gillnets or bottom longlines and collected through onboard surveys or landing sites monitoring. Linear regressions were applied to describe relations between total length and other body measures (disc length, disc width, fork length), and length measurements and body weight. Results showed strong relations across morphometric traits, with R2 values exceeding 0.655 for most relations. Growth patterns varied: four species (Aetomylaeus bovinus, Dasyatis pastinaca, D. tortonesei, Mustelus mustelus) exhibited positive allometry, one species (D. marmorata) displayed negative allometry and Gymnura altavela showed near-isometric growth. Sexual dimorphism was generally absent, although significant differences were found between sex in disc width slopes for D. marmorata, Myliobatis aquila and Torpedo torpedo, and in length–weight relations for M. mustelus. These findings substantially fill regional data gaps, offering new baseline estimates for rare and threatened elasmobranchs. Full article
(This article belongs to the Special Issue Integrating Biodiversity, Ecology, and Management in Shark Research)
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16 pages, 579 KB  
Article
The Short-Tailed Golden Dog Fragmented Realm: α-Hull Unravels the Maned Wolf’s Hidden Population
by Luan de Jesus Matos de Brito
Wild 2026, 3(1), 4; https://doi.org/10.3390/wild3010004 - 13 Jan 2026
Viewed by 36
Abstract
Understanding the spatial structure of large mammals is critical for conservation planning, especially under increasing habitat fragmentation. This study applies an integrated spatial analysis combining the DBSCAN density-based clustering algorithm and the α-hull method to delineate non-convex geographic ranges of the maned wolf [...] Read more.
Understanding the spatial structure of large mammals is critical for conservation planning, especially under increasing habitat fragmentation. This study applies an integrated spatial analysis combining the DBSCAN density-based clustering algorithm and the α-hull method to delineate non-convex geographic ranges of the maned wolf (Chrysocyon brachyurus) across South America. Using 454 occurrence records filtered for ecological reliability, we identified 11 geographically isolated α-populations distributed across five countries and multiple biomes, including the Cerrado, Chaco, and Atlantic Forest. The sensitivity analysis of the α parameter demonstrated that values below 2 failed to generate viable polygons, while α = 2 provided the best balance between geometric detail and ecological plausibility. Our results reveal a highly fragmented distribution, with α-populations varying in area from 43,077 km2 to 566,154.7 km2 and separated by distances up to 994.755 km. Smaller and peripheral α-populations are likely more vulnerable to stochastic processes, genetic drift, and inbreeding, while larger clusters remain functionally isolated due to anthropogenic barriers. We propose the concept of ‘α-population’ as an operational unit to describe geographically and functionally isolated groups identified through combined spatial clustering and non-convex hull analysis. This approach offers a reproducible and biologically meaningful framework for refining range estimates, identifying conservation units, and guiding targeted management actions. Overall, integrating α-hulls with density-based clustering improves our understanding of the species’ fragmented spatial structure and supports evidence-based conservation strategies aimed at maintaining habitat connectivity and long-term viability of C. brachyurus populations. Full article
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18 pages, 449 KB  
Review
Post-NAC Microcalcifications in Breast Cancer: Rethinking Surgical Indications in the Era of Precision Oncology
by Sabatino D’Archi, Beatrice Carnassale, Lorenzo Scardina, Cristina Accetta, Flavia De Lauretis, Alba Di Leone, Antonio Franco, Federica Gagliardi, Stefano Magno, Francesca Moschella, Maria Natale, Alejandro Martin Sanchez, Marta Silenzi, Pierluigi Maria Rinaldi and Gianluca Franceschini
J. Pers. Med. 2026, 16(1), 49; https://doi.org/10.3390/jpm16010049 - 12 Jan 2026
Viewed by 53
Abstract
Residual microcalcifications after neoadjuvant chemotherapy (NAC) in breast cancer remain a complex diagnostic and therapeutic challenge. Although NAC has significantly improved pathologic complete response (pCR) rates and transformed surgical approaches, the persistence or evolution of microcalcifications may not accurately reflect residual disease. This [...] Read more.
Residual microcalcifications after neoadjuvant chemotherapy (NAC) in breast cancer remain a complex diagnostic and therapeutic challenge. Although NAC has significantly improved pathologic complete response (pCR) rates and transformed surgical approaches, the persistence or evolution of microcalcifications may not accurately reflect residual disease. This discrepancy complicates radiologic interpretation, impacts surgical decision-making, and may lead to overtreatment or unnecessary mastectomies. This review synthesizes current evidence on the radiologic–pathologic correlation of post-NAC microcalcifications, their prognostic value, and their relevance to guiding surgical management in contemporary precision oncology. A narrative review of the literature was performed, focusing on imaging evolution after NAC, pathologic correlations, predictive and prognostic implications, and the role of microcalcifications in defining optimal surgical strategies, ranging from breast-conserving surgery to mastectomy. Emerging contributions from digital breast tomosynthesis, contrast-enhanced mammography (CEM), Magnetic Resonance (MR) and radiomics are also examined. Studies consistently demonstrate that residual microcalcifications are often poor predictors of viable tumor tissue after NAC. Up to half of cases with persistent calcifications may reflect minimal or absent residual invasive cancer, whereas calcifications may also persist in areas of treatment-induced necrosis or fibrosis. Reliance on calcifications alone may therefore lead to unnecessary extensive resections. Conversely, specific morphologic patterns, especially fine pleomorphic or branching calcifications, are more strongly associated with residual malignancy. Advanced imaging and radiomics show promise in improving predictive accuracy. Residual microcalcifications after NAC should not be interpreted as a direct surrogate of residual disease. A multimodal assessment integrating imaging evolution, tumor biology, and treatment response is essential to optimize surgical planning and avoid overtreatment. Precision surgery in the NAC era increasingly requires individualized decision-making supported by advanced imaging and robust radiologic–pathologic correlation. Full article
(This article belongs to the Special Issue Breast Cancer: New Advances in Diagnosis and Personalized Therapies)
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Article
Potential of Fermented Food-Derived Lactiplantibacillus Cell-Free Supernatants to Control Staphylococcus aureus Growth and Biofilm Development
by Lena Ilieva, Vesselin Baev, Mariana Marhova, Galina Yahubyan, Elena Apostolova, Mariyana Gozmanova, Velizar Gochev, Tsvetelina Paunova-Krasteva, Tsvetozara Damyanova, Sonya Kostadinova, Miroslava Gocheva and Ivan Iliev
Int. J. Mol. Sci. 2026, 27(2), 760; https://doi.org/10.3390/ijms27020760 - 12 Jan 2026
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Abstract
Staphylococcus aureus biofilms represent a critical healthcare challenge, driving chronic infections and antimicrobial resistance. This study investigates the anti-staphylococcal efficacy of two Lactiplantibacillus strains isolated from traditional Bulgarian pickled vegetables (turshiya): L. plantarum IZITR_24 and L. paraplantarum IZITR_13. Combining whole genome sequencing (WGS) [...] Read more.
Staphylococcus aureus biofilms represent a critical healthcare challenge, driving chronic infections and antimicrobial resistance. This study investigates the anti-staphylococcal efficacy of two Lactiplantibacillus strains isolated from traditional Bulgarian pickled vegetables (turshiya): L. plantarum IZITR_24 and L. paraplantarum IZITR_13. Combining whole genome sequencing (WGS) with functional assays, we established a robust genotype-to-phenotype framework to characterize their antimicrobial arsenal. Based on WGS, we identified conserved plantaricin (plnJK, plnEF) clusters in both isolates, with IZITR_13 additionally carrying genes for pediocin and enterolysin A—alongside the confirmed absence of virulence factors. Reconstituted lyophilized cell-free supernatants (LCFSs) were evaluated in dose–response microtiter assays to determine the minimum biofilm inhibitory concentration (MBIC) and minimum inhibitory concentration (MIC). Both strains demonstrated clear, dose-dependent inhibitory activity against the S. aureus growth and biofilm formation. Microscopy (SEM/CLSM) confirmed significant biofilm disruption and cell membrane permeabilization. The observed consistency between genome-inferred capacity and phenotypes highlights the strong predictive value of a genome-first screening approach for selecting bacteriocin-producing lactic acid bacteria (LAB). These findings position IZITR_24 and IZITR_13 as promising postbiotic producers with potent antibiofilm activity against S. aureus. By utilizing their stable postbiotic products rather than relying on live colonization, this study proposes a targeted, antibiotic-sparing strategy to combat persistent staphylococcal biofilms. Full article
(This article belongs to the Special Issue Antimicrobial Materials: Molecular Developments and Applications)
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