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Keywords = classical biocontrol

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15 pages, 2083 KiB  
Article
Identifying Key Pathogens and Effective Control Agents for Astragalus membranaceus var. mongholicus Root Rot
by Bo Zhang, Bingyan Xia, Chunyan Wang, Ouli Xiao, Tielin Wang, Haoran Zhao, Xiaofeng Dai, Jieyin Chen, Yonggang Wang and Zhiqiang Kong
J. Fungi 2025, 11(7), 544; https://doi.org/10.3390/jof11070544 - 21 Jul 2025
Viewed by 395
Abstract
Root rot is one of the most serious diseases affecting Astragalus membranaceus, significantly reducing its yield and quality. This study focused on root rot in Astragalus membranaceus var. mongholicus. Pathogenic fungi were isolated and identified. The pathogenicity of seven strains of [...] Read more.
Root rot is one of the most serious diseases affecting Astragalus membranaceus, significantly reducing its yield and quality. This study focused on root rot in Astragalus membranaceus var. mongholicus. Pathogenic fungi were isolated and identified. The pathogenicity of seven strains of pathogenic fungi was verified according to Koch’s postulates. The inhibitory effects of eight classic fungicides and nine strains of biocontrol agents on the pathogenic fungi were determined using the mycelial growth rate method. Through morphological and ITS phylogenetic analyses, strains CDF5, CDF6, and CDF7 were identified as Fusarium oxysporum, while strains CDF1, CDF2, CDF3, and CDF4 were identified as Fusarium solani. Indoor virulence tests showed that, among the eight tested fungicides, carbendazim exhibited the strongest inhibitory effect on the mycelial growth of both F. oxysporum and F. solani, with a half-maximal effective concentration (EC50) value of (0.44 ± 0.24) mg/mL, making it a highly promising chemical agent for the control of A. membranaceus var. mongholicus root rot. Among the nine biocontrol agents, KRS006 showed the best inhibitory effect against the seven pathogenic strains, with an inhibition rate ranging from 42.57% to 55.51%, and it can be considered a candidate strain for biological control. This study identified the biocontrol strain KRS006 and the chemical fungicide carbendazim as promising core agents for the biological and chemical control of A. membranaceus var. mongholicus root rot, respectively, providing a theoretical foundation for establishing a dual biocontrol–chemical control strategy. Based on the excellent performance of the biocontrol bacteria and fungicides in the pathogen control tests, future research should focus on field trials to verify the synergistic effect of this integrated control strategy and clarify the interaction mechanism between the antibacterial metabolites produced by the biocontrol bacteria KRS006 and carbendazim. Additionally, continuous monitoring of the evolution of Fusarium spp. resistance to carbendazim is critical to ensure the long-term sustainability of the integrated control system. Full article
(This article belongs to the Special Issue Biological Control of Fungal Plant Pathogens)
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11 pages, 1254 KiB  
Article
The Role of Root Endophyte Pseudomonas putida A32 in the Protection of Two Pepper Genotypes from Pseudomonas syringae pv. aptata
by Aleksandra Mesaroš, Marija Nedeljković, Iva Atanasković, Marija Anđelković, Dario Danojević, Slaviša Stanković and Jelena Lozo
Horticulturae 2025, 11(5), 536; https://doi.org/10.3390/horticulturae11050536 - 15 May 2025
Viewed by 537
Abstract
Endophytes, as an integral part of plants, form unique relationships with their hosts that go beyond classical definitions of symbiosis and influence plant development, immunity, and stress responses. The pepper endophyte strain Pseudomonas putida A32 has several plant growth-promoting properties and increases the [...] Read more.
Endophytes, as an integral part of plants, form unique relationships with their hosts that go beyond classical definitions of symbiosis and influence plant development, immunity, and stress responses. The pepper endophyte strain Pseudomonas putida A32 has several plant growth-promoting properties and increases the tolerance of pepper to drought, but its biocontrol potential is unknown. In this study, we investigated the protective role of P. putida A32 against infection with the pathogenic bacterium P. syringae pv. aptata P21 in two pepper genotypes in laboratory experiments. The percentage of lesion reduction in genotype 26 treated with P. putida A32 was 46.62%. The results showed a significant reduction in hydrogen peroxide and malondialdehyde levels by 29.45 and 20.22%, respectively, in infected genotype 26. The treated but uninfected controls showed a significant increase in superoxide dismutase activity in genotype 26 by 41.26% and ascorbate peroxidase activity in genotype 19 by 40.28% in the treated infected plants. The tolerant genotype 19 was much less dependent on the bacterial treatment under stress conditions than the susceptible genotype 26. Future research will investigate the role of P. putida A32 in the induced systemic resistance of different pepper genotypes to protect against pathogens. Full article
(This article belongs to the Section Biotic and Abiotic Stress)
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17 pages, 953 KiB  
Article
Fly in the Ointment: Host-Specificity Challenges for Botanophila turcica, a Candidate Agent for the Biological Control of Saffron Thistle in Australia
by Vincent Lesieur, Thierry Thomann, Mireille Jourdan, Javid Kashefi and Marie-Claude Bon
Insects 2025, 16(4), 357; https://doi.org/10.3390/insects16040357 - 28 Mar 2025
Viewed by 443
Abstract
In classical biological control of weeds, the risk posed by a candidate agent to close relatives of the target weed in the intended area of release is a key criterion (i.e., candidate agents that demonstrate a high degree of host specificity). In this [...] Read more.
In classical biological control of weeds, the risk posed by a candidate agent to close relatives of the target weed in the intended area of release is a key criterion (i.e., candidate agents that demonstrate a high degree of host specificity). In this study, we investigated if the rosette crown-feeding fly Botanophila turcica Hennig (Diptera: Anthomyiidae) could meet this criterion and thus be considered a good candidate to control saffron thistle Carthamus lanatus L. (Asteraceae: Cardueae) in Australia. Previous studies indicated that B. turcica is specific to Ca. lanatus and did not infest the closely related crop, safflower (Carthamus tinctorius L.). However, more recent field observations made in Greece reported that B. turcica infested safflower in cultivated fields. To determine if B. turcica is safe for release as a biocontrol agent, we re-examined the host range of B. turcica by performing new host-specificity testing combined with field surveys carried out in the south of France during two consecutive years. We also investigated the species identity of the flies by comparing DNA sequences (COI barcode region) of specimens collected in France from Ca. lanatus and Centaurea solstitialis L. with those from Greece collected from Ce. solstitialis and Centaurea diffusa Lam. Our COI analyses confirmed that French and Greek samples identified as B. turcica belonged to the same species, while a second group of Greek samples matched B. brunneilinea, indicating two distinct species. Our results also demonstrated that B. turcica has a wider host range than previously suggested. Laboratory testing indicated that Ca. lanatus, Ca. tinctorius, and Ce. solstitialis are suitable for the development of B. turcica. Field surveys also revealed that Ce. diffusa is part of the host range of the fly. Based on the results reported here, B. turcica may have the potential to control both the target weed, Ca. lanatus, and Ce. Solstitialis, but it may also be a threat to safflower, Ca. tinctorius. Further investigations to assess under what conditions B. turcica attacks Ca. tinctorius may help clarify the level of risk to Australian growers. Full article
(This article belongs to the Section Insect Pest and Vector Management)
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21 pages, 5344 KiB  
Article
Evaluating the Role of Nutrient Competition in Debaryomyces hansenii Biocontrol Activity Against Spoilage Molds in the Meat Industry
by Helena Chacón-Navarrete, Ignacio García-Álvarez de Toledo, José Ramos and Francisco Javier Ruiz-Castilla
J. Fungi 2025, 11(4), 242; https://doi.org/10.3390/jof11040242 - 22 Mar 2025
Viewed by 754
Abstract
The rejection of chemical preservatives reflects the growing demand for natural and safe products. This concern has spurred scientific interest in yeasts as biocontrol agents, given their antagonistic activity against undesired fungi, which is one of the main problems associated with preservative reduction. [...] Read more.
The rejection of chemical preservatives reflects the growing demand for natural and safe products. This concern has spurred scientific interest in yeasts as biocontrol agents, given their antagonistic activity against undesired fungi, which is one of the main problems associated with preservative reduction. Debaryomyces hansenii is a non-conventional yeast that has shown great potential for inhibiting filamentous fungi in the food industry. This study investigated the role of nutrient competition in the biocontrol activity of D. hansenii against unwanted molds. Potentially pathogenic molds from spoiled food were isolated using different media and identified using Sanger sequencing. The inhibitory effects of different autochthonous D. hansenii strains under varying nutrient conditions were assessed against isolated molds using semipermeable membranes. Inhibition activity was measured by assessing mycelial expansion and spore production using image software analysis and classical cell counting using a Neubauer chamber. The results indicated that D. hansenii effectively inhibited mold growth and sporulation, with the autochthonous strains LR2 and SRF1 showing higher inhibitory activity than the control strain CBS767. The effectiveness of inhibition varied with the yeast–mold combination, highlighting the need for a species-specific analysis. Nutrient competition plays a complementary role in D. hansenii biocontrol but does not directly impact overall inhibition. This suggests that other mechanisms, such as direct cell interactions or metabolite production, may be crucial. These findings enhance our understanding of the potential of D. hansenii as a natural preservative and advance biocontrol methods for food safety. Full article
(This article belongs to the Special Issue Biological Control of Fungal Diseases, 2nd Edition)
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14 pages, 12044 KiB  
Article
Estimating the Optimal Control Areas of Two Classical Biocontrol Agents Against the Fall Armyworm Based on Hotspot Matching Analysis
by Haoxiang Zhao, Shanqing Yi, Yu Zhang, Nianwan Yang, Jianyang Guo, Hongmei Li, Xiaoqing Xian and Wanxue Liu
Agriculture 2024, 14(12), 2276; https://doi.org/10.3390/agriculture14122276 - 11 Dec 2024
Cited by 1 | Viewed by 1037
Abstract
Spodoptera frugiperda, the fall armyworm (FAW), is a widespread and polyphagous crop pest, causing serious crop yield losses worldwide, especially maize and other cereals. Biological control (biocontrol) is considered as the generally safer and more environmentally benign strategies compared to chemical insecticides [...] Read more.
Spodoptera frugiperda, the fall armyworm (FAW), is a widespread and polyphagous crop pest, causing serious crop yield losses worldwide, especially maize and other cereals. Biological control (biocontrol) is considered as the generally safer and more environmentally benign strategies compared to chemical insecticides in managing FAW. Chelonus insularis and Eiphosoma laphygmae are two promising classical biocontrol parasitoids against FAW. However, the optimal control areas for FAW with the two parasitoids in its invasive ranges remain unclear. This study is first time to integrate species distribution models and hotspot analysis to estimate the optimal areas for controlling FAW with these two parasitoids worldwide. Key variables influencing distribution include human influence index, temperature, and precipitation. The optimal control areas of FAW with C. insularis and E. laphygmae are in most of sub-Saharan Africa, Mediterranean regions, eastern, southern, and southeastern Asia, and Oceania. These areas are expected to expand to high-latitude areas under changing climatic conditions. Niche comparisons indicated that the FAW and C. insularis niches were closely aligned. Chelonus insularis and E. laphygmae are potentially effective against FAW in Africa, Asia, and Oceania. Our findings offer insights into the strategic use of the two parasitoids against FAW worldwide. Full article
(This article belongs to the Section Crop Protection, Diseases, Pests and Weeds)
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21 pages, 2116 KiB  
Review
Staphylococcal Enterotoxins: Description and Importance in Food
by Mirian Yuliza Rubio Cieza, Erika Carolina Romão Bonsaglia, Vera Lucia Mores Rall, Marcos Veiga dos Santos and Nathália Cristina Cirone Silva
Pathogens 2024, 13(8), 676; https://doi.org/10.3390/pathogens13080676 - 9 Aug 2024
Cited by 16 | Viewed by 5792
Abstract
Staphylococcus aureus stands out as one of the most virulent pathogens in the genus Staphylococcus. This characteristic is due to its ability to produce a wide variety of staphylococcal enterotoxins (SEs) and exotoxins, which in turn can cause staphylococcal food poisoning (SFP), [...] Read more.
Staphylococcus aureus stands out as one of the most virulent pathogens in the genus Staphylococcus. This characteristic is due to its ability to produce a wide variety of staphylococcal enterotoxins (SEs) and exotoxins, which in turn can cause staphylococcal food poisoning (SFP), clinical syndromes such as skin infections, inflammation, pneumonia, and sepsis, in addition to being associated with the development of inflammation in the mammary glands of dairy cattle, which results in chronic mastitis and cell necrosis. SEs are small globular proteins that combine superantigenic and emetic activities; they are resistant to heat, low temperatures, and proteolytic enzymes and are tolerant to a wide pH range. More than 24 SE genes have been well described (SEA-SEE, SEG, SEH, SEI, SEJ, SElK, SElL, SElM, SElN, SElO, SElP, SElQ, SElR, SElS, SElT, SElU, SElV, SElW, SElX, SElY, and SElZ), being a part of different SFP outbreaks, clinical cases, and isolated animal strains. In recent years, new genes (sel26, sel27, sel28, sel31, sel32, and sel33) from SEs have been described, as well as two variants (seh-2p and ses-3p) resulting in a total of thirty-three genes from Ses, including the nine variants that are still in the process of genetic and molecular structure evaluation. SEs are encoded by genes that are located in mobile genetic elements, such as plasmids, prophages, pathogenicity islands, and the enterotoxin gene cluster (egc), and housed in the genomic island of S. aureus. Both classical SEs and SE-like toxins (SEls) share phylogenetic relationships, structure, function, and sequence homology, which are characteristics for the production of new SEs through recombination processes. Due to the epidemiological importance of SEs, their rapid assessment and detection have been crucial for food security and public health; for this reason, different methods of identification of SEs have been developed, such as liquid chromatography coupled with high-resolution mass spectrometry (LC-HRMS), molecular methods, and whole-genome sequencing; providing the diagnosis of SEs and a better understanding of the occurrence, spread, and eradication of SEs. This review provides scientific information on the enterotoxins produced by S. aureus, such as structural characteristics, genetic organization, regulatory mechanisms, superantigen activity, mechanisms of action used by SEs at the time of interaction with the immune system, methods of detection of SEs, and recent biocontrol techniques used in food. Full article
(This article belongs to the Collection New Insights into Bacterial Pathogenesis)
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16 pages, 5382 KiB  
Article
Genome-Wide Identification of SNARE Family Genes and Functional Characterization of an R-SNARE Gene BbSEC22 in a Fungal Insect Pathogen Beauveria bassiana
by Fang Li, Juefeng Zhang, Haiying Zhong, Kaili Yu and Jianming Chen
J. Fungi 2024, 10(6), 393; https://doi.org/10.3390/jof10060393 - 31 May 2024
Viewed by 1185
Abstract
Soluble N-ethylmaleimide-sensitive factor attachment protein receptors (SNAREs) are central components of the machinery mediating cell membrane fusion and intracellular vesicular trafficking in eukaryotic cells, and have been well-documented to play critical roles in growth, development, and pathogenesis in the filamentous fungal plant pathogens. [...] Read more.
Soluble N-ethylmaleimide-sensitive factor attachment protein receptors (SNAREs) are central components of the machinery mediating cell membrane fusion and intracellular vesicular trafficking in eukaryotic cells, and have been well-documented to play critical roles in growth, development, and pathogenesis in the filamentous fungal plant pathogens. However, little is known about the contributions of SNAREs to the physiology and biocontrol potential in entomopathogenic filamentous fungi. Here, a genome-wide analysis of SNARE genes was performed taking advantage of the available whole genome sequence of Beauveria bassiana, a classical entomopathogenic fungus. Based on the compared genomic method, 22 genes encoding putative SNAREs were identified from the whole genome of B. bassiana, and were classified into four groups (7 Qa-, 4 Qb-, 6 Qc-, and 5 R-SNAREs) according to the conserved structural features of their encoding proteins. An R-SNARE encoding gene BbSEC22 was further functionally characterized by gene disruption and complementation. The BbSEC22 null mutant showed a fluffy appearance in mycelial growth and an obvious lag in conidial germination. The null mutant also exhibited significantly increased sensitivity to oxidative stress and cell wall perturbing agents and reduced the yield of conidia production by 43.1% compared with the wild-type strain. Moreover, disruption of BbSEC22 caused a significant decrease in conidial virulence to Spodoptera litura larvae. Overall, our results provide an overview of vesicle trafficking in B. bassiana and revealed that BbSec22 was a multifunctional protein associated with mycelial growth, sporulation, conidial germination, stress tolerance, and insecticidal virulence. Full article
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16 pages, 12663 KiB  
Article
Modeling Study of Factors Determining Efficacy of Biological Control of Adventive Weeds
by Yuri V. Tyutyunov, Vasily N. Govorukhin and Vyacheslav G. Tsybulin
Mathematics 2024, 12(1), 160; https://doi.org/10.3390/math12010160 - 4 Jan 2024
Viewed by 1479
Abstract
We model the spatiotemporal dynamics of a community consisting of competing weed and cultivated plant species and a population of specialized phytophagous insects used as the weed biocontrol agent. The model is formulated as a PDE system of taxis–diffusion–reaction type and computer-implemented for [...] Read more.
We model the spatiotemporal dynamics of a community consisting of competing weed and cultivated plant species and a population of specialized phytophagous insects used as the weed biocontrol agent. The model is formulated as a PDE system of taxis–diffusion–reaction type and computer-implemented for one-dimensional and two-dimensional cases of spatial habitat for the Neumann zero-flux boundary condition. In order to discretize the original continuous system, we applied the method of lines. The obtained system of ODEs is integrated using the Runge–Kutta method with a variable time step and control of the integration accuracy. The numerical simulations provide insights into the mechanism of formation of solitary population waves (SPWs) of the phytophage, revealing the factors that determine the efficacy of combined application of the phytophagous insect (classical biological method) and cultivated plant (phytocenotic method) to suppress weed foci. In particular, the presented results illustrate the stabilizing action of cultivated plants, which fix the SPW effect by occupying the free area behind the wave front so that the weed remains suppressed in the absence of a phytophage. Full article
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14 pages, 1449 KiB  
Article
Age- and Density-Dependent Parasitism Rate and Development Time of the Generalist Egg-Parasitoid Ooencyrtus telenomicida (Hymenoptera: Encyrtidae) on Eggs of the Brown Marmorated Stink Bug, Halyomorpha halys
by Eleni I. Koutsogeorgiou, Theodoros Moysiadis, Georgios T. Fifis, Nikoloz E. Gogolashvili, Dimitrios Chatzimpalasis and Stefanos S. Andreadis
Insects 2024, 15(1), 14; https://doi.org/10.3390/insects15010014 - 28 Dec 2023
Cited by 4 | Viewed by 2013
Abstract
Halyomorpha halys (Hemiptera: Pentatomidae) is an invasive pest species that was imported into Greece in 2011 and since then, has caused severe qualitative and quantitative damage to economically important crops. Its management relies mainly on the use of broad-spectrum insecticides, with little to [...] Read more.
Halyomorpha halys (Hemiptera: Pentatomidae) is an invasive pest species that was imported into Greece in 2011 and since then, has caused severe qualitative and quantitative damage to economically important crops. Its management relies mainly on the use of broad-spectrum insecticides, with little to no information available concerning the potential use of native parasitoids in terms of classical biological control. Our study aimed to assess the parasitism rate and development time of the gregarious egg parasitoid Ooencyrtus telenomicida (Hymenoptera: Encyrtidae) on H. halys egg-masses, depending on several factors such as: (i) age of parasitoids, (ii) density of parasitoids, (iii) age of host eggs, and (iv) oviposition experience of parasitoids. According to our results, the younger the host eggs and the more parasitoids, the higher the parasitism rate achieved by adults of O. telenomicida, with the maximum mean value of the parasitism rate observed with 1-day-old host eggs and 4 parasitoid pairs (57.3%). On the contrary, the lowest mean value of the parasitism rate was observed with 4-day-old host eggs and 1 parasitoid pair (6.5%). Similarly, the age of parasitoids significantly affected parasitisation. The older the parasitoids were, the higher the parasitism rate achieved by adults of O. telenomicida, with a three-fold higher parasitism rate observed at 3–4 and 5–6-day-old O. telenomicida, compared to 1–2-day-old (31.8, 32.4, and 12.1%, respectively). Individuals that developed in younger host eggs displayed a shorter development time, and the shortest development time was observed for O. telenomicida laid by 2 parasitoid pairs. Parasitoid age did not affect the development time of O. telenomicida, although there was a tendency for individuals laid by younger female parasitoids to exhibit a shorter development time. Our findings provide valuable information on the potential use of O. telenomicida as a biocontrol agent of H. halys. Full article
(This article belongs to the Section Insect Physiology, Reproduction and Development)
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19 pages, 3439 KiB  
Article
Reproductive Parameters and Host Specificity of Eurytoma erythrinae (Hymenoptera: Eurytomidae), a Biological Control Agent of the Erythrina Gall Wasp, Quadrastichus erythrinae (Hymenoptera: Eulophidae)
by Walter T. Nagamine, Juliana A. Yalemar, Mark G. Wright and Mohsen M. Ramadan
Insects 2023, 14(12), 923; https://doi.org/10.3390/insects14120923 - 3 Dec 2023
Cited by 1 | Viewed by 2029
Abstract
Eurytoma erythrinae Gates & Delvare (Hymenoptera: Eurytomidae) is an important biological control agent of the erythrina gall wasp (EGW), Quadrastichus erythrinae Kim (Hymenoptera: Eulophidae), an invasive species likely originating in eastern Africa that is a threat to Erythrina trees in Hawaii and worldwide. Thousands [...] Read more.
Eurytoma erythrinae Gates & Delvare (Hymenoptera: Eurytomidae) is an important biological control agent of the erythrina gall wasp (EGW), Quadrastichus erythrinae Kim (Hymenoptera: Eulophidae), an invasive species likely originating in eastern Africa that is a threat to Erythrina trees in Hawaii and worldwide. Thousands of Erythrina trees in Hawaii have succumbed to EGW since 2005 and died within a few years of infestation. The endemic wiliwili tree, Erythrina sandwicensis, an important component of Hawaii’s dry forests and one of few deciduous native trees, were severely impacted by this wasp. Early during the invasion by EGW it became evident that the endemic species may be driven to extinction, and exploration programs for natural enemies of the EGW started in December 2005. East Africa was selected as the starting point for natural enemy exploration owing to high native Erythina species richness. Several gall formers were found in Tanzania and a putative color variant type of Q. erythrinae was detected in association with three ectoparasitoids. During January 2006, the dominant parasitoid of this gall former was introduced to Hawaii and described as the new species, E. erythrinae. It was found in Ghana and South Africa attacking other gall wasp species on Erythrina. Eurytoma erythrinae was a voracious ectoparasitoid feeding as a predator on 1–5 adjacent EGW immatures to complete its development. Host specificity studies that included seven nontarget gall-forming species showed no evidence of attraction or parasitism by this parasitoid. Mean ± SEM longevity of host-deprived females (40.4 ± 2.2 days) was significantly higher than males (20.5 ± 1.1 days). Host feeding enhanced longevity of ovipositing females (51.3 ± 1.5 days). Female E. erythrinae is synovigenic, with high egg-maturation rate. Peak fecundity (105–239 offspring/female), host feeding biology, short life cycle (18.4 ± 0.1 days), and synchronization with the host were additional desirable attributes of this species. The parasitoid was approved for field release in Hawaii in November 2008. A total of 3998 wasps were distributed on six Hawaiian Islands, with establishment in less than a year. Impacts on high density infestations of EGW were sufficient to prevent tree deaths. Limited rates of parasitism on low-density galled leaves, flowers, and seedpods necessitated the consideration for releasing a second parasitoid, Aprostocetus nitens Prinsloo & Kelly (Hymenoptera: Eulophidae). We report on the reproductive characteristics and host specificity of E. erythinae that could be of importance for classical biocontrol programs in areas with an EGW problem. Full article
(This article belongs to the Section Insect Pest and Vector Management)
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21 pages, 4559 KiB  
Article
Introducing Autochthonous Bacterium and Fungus Composition to Enhance the Phytopathogen-Suppressive Capacity of Composts against Clonostachys rosea, Penicillium solitum and Alternaria alternata In Vitro
by Vladimir Mironov, Anna Shchelushkina, Olga Selitskaya, Yury Nikolaev, Alexander Merkel and Shenghua Zhang
Agronomy 2023, 13(11), 2841; https://doi.org/10.3390/agronomy13112841 - 18 Nov 2023
Cited by 2 | Viewed by 2215
Abstract
Given their numerous positive characteristics, composts are widely used agriculturally in sustainable development and resource-saving technologies. The management of phytopathogen-suppressive potential and the fertilizing capacity of composts are of great interest. This study examines the impact of introducing the autochthonous compost species Bacillus [...] Read more.
Given their numerous positive characteristics, composts are widely used agriculturally in sustainable development and resource-saving technologies. The management of phytopathogen-suppressive potential and the fertilizing capacity of composts are of great interest. This study examines the impact of introducing the autochthonous compost species Bacillus subtilis, B. amyloliquefaciens, Pseudomonas aeruginosa, and Aspergillus corrugatus, both individually and in combination, to composts containing dry matter comprising 36% solid compost and 7% compost suspensions to study their phytopathogen-suppressive and phytostimulation activity. The test phytopathogens were Clonostachys rosea, Penicillium solitum, and Alternaria alternata. This is the first report on compost’s potential to biologically control C. rosea and P. solitum. Classical microbiological and molecular biological methods were used to evaluate the survival rate of microorganisms in compost and validate these results. Test plant (Raphanus sativus) germination indexes were determined to evaluate the phytotoxic/phytostimulation effects of the substrates. To assess the effectiveness of biocontrol, mycelial growth inhibition was measured using in vitro tests. The introduction of composition increased the composts’ fertilizing properties by up to 35% and improved antagonistic activity by up to 91.7%. Autochthonous bacterial–fungal composition can promote resistance to fungal root and foliar phytopathogens and raise the fertilizing quality of compost. Full article
(This article belongs to the Section Pest and Disease Management)
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22 pages, 3978 KiB  
Article
The Endophytic Microbiome of Wild Grapevines Vitis amurensis Rupr. and Vitis coignetiae Pulliat Growing in the Russian Far East
by Olga A. Aleynova, Nikolay N. Nityagovsky, Alexey A. Ananev, Andrey R. Suprun, Zlata V. Ogneva, Alina A. Dneprovskaya, Alina A. Beresh, Alexey P. Tyunin, Alexandra S. Dubrovina and Konstantin V. Kiselev
Plants 2023, 12(16), 2952; https://doi.org/10.3390/plants12162952 - 15 Aug 2023
Cited by 5 | Viewed by 2269
Abstract
Many grape endophytic microorganisms exhibit high potential for suppressing the development of grape diseases and stimulating grapevine growth and fitness, as well as beneficial properties of the crop. The microbiome of wild grapevines is a promising source of biocontrol agents, which can be [...] Read more.
Many grape endophytic microorganisms exhibit high potential for suppressing the development of grape diseases and stimulating grapevine growth and fitness, as well as beneficial properties of the crop. The microbiome of wild grapevines is a promising source of biocontrol agents, which can be beneficial for domesticated grapevines. Using next-generation sequencing (NGS) and classical microbiology techniques, we performed an analysis of bacterial and fungal endophytic communities of wild grapevines Vitis amurensis Rupr. and Vitis coignetiae Pulliat growing in the Russian Far East. According to the NGS analysis, 24 and 18 bacterial taxa from the class level were present in V. amurensis and V. coignetiae grapevines, respectively. Gammaproteobacteria (35%) was the predominant class of endophytic bacteria in V. amurensis and Alphaproteobacteria (46%) in V. coignetiae. Three taxa, namely Sphingomonas, Methylobacterium, and Hymenobacter, were the most common bacterial genera for V. amurensis and V. coignetiae. Metagenomic analysis showed the presence of 23 and 22 fungi and fungus-like taxa of class level in V. amurensis and V. coignetiae, respectively. The predominant fungal classes were Dothideomycetes (61–65%) and Tremellomycetes (10–11%), while Cladosporium and Aureobasidium were the most common fungal genera in V. amurensis and V. coignetiae, respectively. A comparative analysis of the endophytic communities of V. amurensis and V. coignetiae with the previously reported endophytic communities of V. vinifera revealed that the bacterial biodiversity of V. amurensis and V. coignetiae was similar in alpha diversity to V. vinifera’s bacterial biodiversity. The fungal alpha diversity of V. amurensis and V. coignetiae was statistically different from that of V. vinifera. The beta diversity analysis of bacterial and fungal endophytes showed that samples of V. vinifera formed separate clusters, while V. amurensis samples formed a separate cluster including V. coignetiae samples. The data revealed that the endophytic community of bacteria and fungi from wild V. amurensis was richer than that from V. coignetiae grapes and cultivated V. vinifera grapes. Therefore, the data obtained in this work could be of high value in the search for potentially useful microorganisms for viticulture. Full article
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12 pages, 688 KiB  
Article
Antifungal In Vitro Activity of Phoradendron sp. Extracts on Fungal Isolates from Tomato Crop
by Alma Leticia Salas-Gómez, César Alejandro Espinoza Ahumada, Rocío Guadalupe Castillo Godina, Juan Alberto Ascacio-Valdés, Raúl Rodríguez-Herrera, Ma. Teresa de Jesús Segura Martínez, Efraín Neri Ramírez, Benigno Estrada Drouaillet and Eduardo Osorio-Hernández
Plants 2023, 12(3), 672; https://doi.org/10.3390/plants12030672 - 3 Feb 2023
Cited by 3 | Viewed by 3044
Abstract
Synthetic chemicals are mainly used for the control of fungal diseases in tomato, causing the phytopathogens to generate resistance to the chemical active ingredient, with a consequent risk to human health and the environment. The use of plant extracts is an option for [...] Read more.
Synthetic chemicals are mainly used for the control of fungal diseases in tomato, causing the phytopathogens to generate resistance to the chemical active ingredient, with a consequent risk to human health and the environment. The use of plant extracts is an option for the control of these diseases, which is why the main objective of this research was to study an alternative biocontrol strategy for the management of plant diseases caused by fungi through obtaining polyphenol extracts from mistletoe plants growing on three different tree species—mesquite (Prosopis glandulosa), cedar (Cedrus), and oak (Quercus), which contain flavones, anthocyanins, and luteolin. The overall chemical structure of the obtained plant extracts was investigated by RP-HPLC-ESI-MS liquid chromatography. The antifungal effect of these extracts was examined. The target phytopathogenic fungi were isolated from tomato plantations located in Altamira, Tamaulipas, Mexico. The microorganisms were characterized by classical and molecular methods and identified as Alternaria alternata, Fusarium oxysporum, Fusarium sp., and Rhizoctonia solani. Full article
(This article belongs to the Special Issue Agricultural Microbiology)
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19 pages, 549 KiB  
Article
Considering the Geographic Diversity of Natural Enemy Traits in Biological Control: A Quantitative Approach Using Orius Predators as an Example
by Tarryn Schuldiner-Harpaz and Moshe Coll
Diversity 2022, 14(11), 963; https://doi.org/10.3390/d14110963 - 10 Nov 2022
Cited by 4 | Viewed by 2132
Abstract
The desirable characteristics of effective natural enemies and the causes for failure of biological control efforts have been discussed extensively in the literature, yet predicting which collection site may yield efficient natural enemies remains a challenge. Insect characteristics, such as morphology, physiology, life [...] Read more.
The desirable characteristics of effective natural enemies and the causes for failure of biological control efforts have been discussed extensively in the literature, yet predicting which collection site may yield efficient natural enemies remains a challenge. Insect characteristics, such as morphology, physiology, life history and behavior, often vary across geographic cline and location. These variations may reflect phenotypic plasticity across environments, or genetically based local (demic) adaptation. Parameters such as body size, photoperiod response, thermal tolerance and genetic diversity may greatly influence the outcome of biological control efforts. Therefore, geographic variation in such characteristics may be used to optimize the collection site of efficient enemies to be employed in biological control programs. The first step towards this goal is compilation of data on the trait diversity of promising natural enemies across their geographic distribution range. For example, we used published information to compile a database on the geographic distribution of various traits of 92 Orius species (Heteroptera: Anthocoridae), a genus known for its potential contribution to biological control in IPM systems. We discuss how the widespread distribution of this genus in different ecozones should enable the collection of species and populations that differ in various geographically dependent traits relevant to biological control. Finally, we suggest a quantitative method to optimize collection efforts of natural enemies. This approach balances the effects of several natural enemy traits that vary geographically. Lastly, we demonstrate the use of this method by evaluating the potential employment of two geographically distinct populations of O. albidipennis. Full article
(This article belongs to the Special Issue Heteroptera: Biodiversity, Evolution, Taxonomy and Conservation)
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18 pages, 7216 KiB  
Article
Isolation of Novel Xanthomonas Phages Infecting the Plant Pathogens X. translucens and X. campestris
by Sebastian H. Erdrich, Vikas Sharma, Ulrich Schurr, Borjana Arsova and Julia Frunzke
Viruses 2022, 14(7), 1449; https://doi.org/10.3390/v14071449 - 30 Jun 2022
Cited by 12 | Viewed by 4192
Abstract
The genus of Xanthomonas contains many well-known plant pathogens with the ability to infect some of the most important crop plants, thereby causing significant economic damage. Unfortunately, classical pest-control strategies are neither particularly efficient nor sustainable and we are, therefore, in demand of [...] Read more.
The genus of Xanthomonas contains many well-known plant pathogens with the ability to infect some of the most important crop plants, thereby causing significant economic damage. Unfortunately, classical pest-control strategies are neither particularly efficient nor sustainable and we are, therefore, in demand of alternatives. Here, we present the isolation and characterization of seven novel phages infecting the plant-pathogenic species Xanthomonas translucens and Xanthomonas campestris. Transmission electron microscopy revealed that all phages show a siphovirion morphology. The analysis of genome sequences and plaque morphologies are in agreement with a lytic lifestyle of the phages making them suitable candidates for biocontrol. Moreover, three of the isolated phages form the new genus “Shirevirus”. All seven phages belong to four distinct clusters underpinning their phylogenetic diversity. Altogether, this study presents the first characterized isolates for the plant pathogen X. translucens and expands the number of available phages for plant biocontrol. Full article
(This article belongs to the Section Bacterial Viruses)
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