Search Results (15)

This research aimed to evaluate the effect of biofloc technology on the intestinal morphometry, productive performance, and survival of juvenile Mugil cephalus. An 87-day investigation was conducted with two treatments, each with three replicates. Treatment one involved rearing juvenile M. cephalus in a biofloc system with a C/N ratio of 15:1, and treatment two involved rearing juvenile M. cephalus with a water exchange and no carbon addition. Ninety (90) juveniles of Mugil cephalus with an average weight of 117.36 ± 6.48 g were randomly distributed into six (6) circular plastic tanks of 250 L (fifteen fish per tank). At the end of the experiment, 10% of each experimental unit’s population was sacrificed for intestinal morphometry analysis. The productive performance was evaluated every 30 days by randomly sampling fish from each tank for biometric measurements, including the specific growth rate (SGR), feed conversion ratio (FCR), condition factor (K), and survival. No structural changes were observed in the intestinal mucosa. The fish reared in biofloc exhibited a similar gut morphometry (villus length and villus thickness) compared to the fish in the water exchange system. The biofloc system does not compromise the gut health of mullet. No significant differences (p > 0.05) were observed in the final weight, weight gain (WG), daily weight gain (DWG), specific growth rate (SGR), condition factor (K), and survival between the treatments evaluated. M. cephalus can be reared using biofloc technology, demonstrating significant water savings compared to water exchange systems. Full article

Bacterial diseases cause high mortality and considerable losses in aquaculture. The rapid expansion of intensive aquaculture has further increased the risk of large-scale outbreaks. However, the emergence of drug-resistant bacteria, food safety concerns, and environmental regulations have severely limited the availability of antimicrobial. Compared to traditional antibiotics, antimicrobial peptides (AMPs) offer broad spectrum activity, physicochemical stability, and lower resistance development. However, their low natural yield and high extraction costs along with the time-consuming and expensive nature of traditional drug discovery, pose a challenge. In this study, we applied a machine-learning macro-model to predict AMPs from three macrogenomes in the water column of South American white shrimp aquaculture ponds. The AMP content per megabase in the traditional earthen pond (TC1) was 1.8 times higher than in the biofloc pond (ZA1) and 63% higher than in the elevated pond (ZP11). A total of 1033 potential AMPs were predicted, including 6 anionic linear peptides, 616 cationic linear peptides, and 411 cationic cysteine-containing peptides. After screening based on structural, and physio-chemical properties, we selected 10 candidate peptides. Using a rapid high-throughput cell-free protein expression system, we identified nine peptides with antimicrobial activity against aquatic pathogens. Three were further validated through chemical synthesis. The three antimicrobial peptides (K-5, K-58, K-61) showed some inhibitory effects on all four pathogenic bacteria. The MIC of K-5 against Vibrio alginolyticus was 25 μM, the cell viability of the three peptides was higher than 70% at low concentrations (≤12.5 μM), and the hemolysis rate of K-5 and K-58 was lower than 5% at 200 μM. This study highlights the benefits of machine learning in AMP discovery, demonstrates the potential of cell-free protein synthesis systems for peptide screening, and provides an efficient method for high-throughput AMP identification for aquatic applications. Full article

The tiger shrimp Penaeus monodon is a commercially important species; however, the intensification of the farming of this species has led to the production and release of significant amounts of organic waste. Traditional aquaculture uses water exchange for waste removal, which may cause pollution and infection of reared species with external pathogens. This study aimed to evaluate the effects of two different aquaculture modes on the antioxidant status, nonspecific immune response, and growth performance of P. monodon, and reveal differences in their microbial communities. The experiment was divided into two groups: one using bioflocs and zero water exchange (Group ZC), and the other using a clear water system (Group C). The results showed that, compared with those in Group C, P. monodon in Group ZC exhibited a higher final body weight, lower feed conversion ratio, higher survival rate, and higher unit yield. Additionally, P. monodon in Group ZC showed higher antioxidant and digestive enzyme activities, as well as upregulated expression of immune-related genes (such as lysozyme, anti-lipopolysaccharide factor, and Toll-like receptors). Therefore, biofloc technology can improve the growth performance, immunity, and antioxidant capacity of P. monodon, offering an environmentally friendly and efficient aquaculture model for P. monodon farming. Full article

Biofloc technology (BFT) is an advanced aquaculture method that uses microbial communities to enhance water quality and support aquatic species cultivation. Our research aims to delve into the pivotal role of aeration intensity within BFT systems, revealing its influence on microbial community structures, water quality, and nutrient cycling for L. vannamei culture. Three aeration levels were set with intensities of V75 (75 L/min), V35 (35 L/min), and V10 (10 L/min). The results showed that the lowest aeration intensity (V10) resulted in larger floc sizes and a reduction in the 2D-fractal dimensions, indicating a decreased overall structural complexity of the bioflocs. In addition, water quality parameters, including total ammonia nitrogen and nitrite, remained low across all treatments, highlighting the water-purifying capacity of biofloc. While protein and lipid contents in biofloc did not differ significantly among treatments, docosahexaenoic acid (DHA) levels were highest in the V75 treatment, suggesting that higher aeration promotes the accumulation of essential fatty acids. RDA analysis revealed that microorganisms like Ruegeria sp. and Sulfitobacter mediterraneus negatively correlated with ammonia and nitrite levels, suggesting their key role in converting ammonia to nitrite and nitrate in marine nitrogen cycles. The functional annotation of metagenomes across different aeration levels showed the similarly active roles of microorganisms in nitrogen metabolism and protein synthesis. In conclusion, while variations in aeration intensity affect floc size and the accumulation of essential fatty acids in biofloc, they do not significantly impact overall water quality or core microbial functions in L. vannamei aquaculture. Future research should focus on the effects of aeration strategies on microbial community dynamics and the integration of these data with performance metrics in L. vannamei. These insights can help optimize biofloc cultivation and enhance environmental sustainability in the aquaculture industry. Full article

Brasília, Distrito Federal, is among the Brazilian cities with the highest number of tilapia farms, with around 660 farms, of which 112 are commercial. The aim of this study was to validate a health characterization model for commercial tilapia production using the production chain in the Distrito Federal (DF), one of Brazil’s 27 federative units, by applying a semi-structured questionnaire. A total of 112 farms were categorized according to the degree of vulnerability to the introduction of pathogens and the risk of dissemination using two weighted scorecard tables that evaluated 15 items each. After calculating the mean between the two variables, the farms were classified from A (insignificant risk) to D (high risk). Most of the commercial tilapia farms in the Distrito Federal were categorized as B (39; 34.8%) and C (53; 47.3%), representing low and medium risk, respectively. When comparing the different commercial groups, a significant difference (p < 0.05) was observed in the mean scores between closed-system fattening farms and both semi-closed fattening farms and pay-to-fish farms. Closed-system fattening farms, such as those using biofloc, aquaponics, and recirculation aquaculture systems, showed the lowest vulnerability to pathogen entry and the lowest risk of disease spread. The study’s findings provide valuable health information for the official veterinary service of the DF, enabling the categorization of farms, identification of production units, and determination of the most vulnerable strata. Furthermore, the model can be easily applied by private companies and by official veterinary services in other states or countries with significant tilapia production that need to implement risk-based surveillance programs for tilapia farms. Full article

To investigate the effects of biofloc mode on the water environment and intestinal microbial community structure of largemouth bass, a 60-day culture experiment was conducted without water replacement in 300-L glass tanks. The experiment included a control group and a biofloc group, each with three replicates. The results showed the following: (i) the richness and diversity of the water environment and fish intestinal microbial community increased under the biofloc model; (ii) Proteobacteria, Patescibacteria, and Bacteroidota were the dominant phyla in the water environment of largemouth bass, while Proteobacteria, Firmicutes, Bacteroidota, Patescibacteria, and Actinobacteriota were the dominant phyla in the gut of largemouth bass. However, differences in the relative abundance and community structure of microorganisms were observed between the two groups, suggesting that the biofloc system impacts both the water environment and intestinal microbial community structure in largemouth bass culture. (iii) A correlation analysis between water quality indices and enzyme activity with microbial abundance revealed that microbial community composition could effectively reflect water quality and fish physiological health. Based on the analysis of microbial community structure, this study offers a theoretical foundation for integrating largemouth bass culture with the biofloc system, and provides valuable data for future health management and water quality control in largemouth bass production. Full article

Biofloc technology (BFT) systems heavily rely on microbiota to mitigate ammonia toxicity and manage essential nutrient cycling. Understanding the diversity and functional role of microbiota within BFT-applied aquaculture systems is crucial for ensuring sustainable operations. Though some studies exist on BFT microbiota, research on microbial differences in Japanese eel aquaculture is still limited, hindering the wider application of BFT systems. In this study, we analyzed the characteristics of water quality factors and microbiota in Japanese eel (Anguilla japonica) breeding water, applying the BFT system. Using a metabarcoding approach, the diversity and community structure of aquatic microbiota were compared between BFT and continuous flow (CF) systems. The pH was significantly higher in CF water, while total ammonia nitrogen (TAN) and nitrite (NO₂⁻-N) was higher in BFT water. Alpha diversity was significantly higher in BFT compared to CF systems, and it was correlated significantly with pH and TAN. In both BFT and CF water, the phyla Proteobacteria and Bacteroidota were found to be the most abundant. In the BFT water, a diverse array of bacterial taxa, including BFT-specific clades, were consistently present, while the microbiota in CF water was more variable and contained fewer specific taxa. In addition, bacterial functions related to nitrate reduction, sulfur compound oxidation, and chitinolysis were significantly more abundant in BFT than in CF systems. These findings highlight differences in water quality and microbiota between aquaculture systems, which can inform future research on the use of BFT for sustainable fish farming. Full article

The use of artificial substrates and biofloc technology can favor fish culture and improve water quality. The aim of this study was to evaluate whether artificial substrates and carbon source additions modify the microbial activity of water bodies. The diversity and structure of microflora in the water after adding artificial substrates and carbon sources to the ponds were analyzed using high-throughput sequencing based on the V3-V4 region of 16S rRNA genes. The results showed that there was no difference in the richness and diversity of intestinal microflora between the control and experimental groups. Principal coordinate analysis (PCoA) and nonmetric multidimensional scaling (NMDS) showed that artificial substrate and carbon source addition changed the structure of the microflora. The results of a linear discriminant analysis (LDA) effect size (LefSe) indicated 11 biomarkers in the EGˍst group. Spearman correlation heatmap analysis showed that environmental factors affected the bacterial communities, and the results of a redundancy analysis indicated that chemical oxygen demand was a critical factor in controlling the bacterial communities in the water. These results provide an understanding of the effect of artificial substrate and carbon source addition on bacterial diversity and community composition in water. Full article

This study focused on evaluating the effect of different concentrations of nutrients and total suspended solids on the removal rate of nutrients and biocompounds from the macroalgae U. lactuca in an integrated system with the shrimp Penaeus vannamei in biofloc. The experiment lasted 45 days and included five treatments with three replicates each, with percentages of 0 (control), 25, 50, 75, and 100% biofloc inoculum (73.3 ± 5.7 and 325.0 ± 21.2 mg L⁻¹ initial nitrate and solids, respectively, in the 100% inoculum), from a shrimp farm, resulting in different concentrations of solids and nutrients. The macroalgae were introduced into 280 L tanks at a density of 0.88 kg m⁻², along with 200 shrimp m⁻³. The algae were separated by a floating structure. Water quality parameters were measured, and the nutrient removal rate was evaluated. The treatment with 75% inoculum showed a removal rate of 55.0 ± 4.0 and 31.0 ± 10.0% of nitrate and phosphate, respectively. There was no difference in macroalgae growth between the treatments; however, macroalgae grown in 75% inoculum had higher protein, chlorophyll-a, and lower ash values compared with the control. The use of macroalgae in integrated production with shrimp under the conditions of the treatment with 75% biofloc inoculum proved to be viable and sustainable. Full article

Oysters have the potential to be a part of more sustainable farming systems, such as multitrophic systems integrated into biofloc systems, due to their filtration activity, which enables them to act as organic consumers. However, the stress experienced by animals in a system with a high organic load can compromise their productive performance. The objective of this study was to evaluate the biological responses of Crassostrea gasar oysters when exposed to different concentrations of total suspended solids in biofloc systems. The oysters were exposed to four different concentrations of solids for 28 days. Hall effect sensors were installed on the outside of the shells to detect the movement of the oyster valves. Also, biochemical and histological analyses were conducted to assess the biological responses of the oysters to exposure to varying levels of solids. A difference in valve opening detected by the Hall sensors was observed from the second week of culture, indicating a relationship between shell closure and higher concentrations of suspended solids present in the system. In terms of biochemical analysis, a significant increase in lipid damage was observed in treatments with medium and high levels of total suspended solids compared with the control group. Conversely, no changes were observed in the gill structure of the oysters caused by the concentrations of suspended solids in the system when compared with the control. According to the analyses of gill activity and biochemistry, it is suggested that C. gasar should be cultured with total suspended solids at less than 200 mg/L. Oysters cultivated in a biofloc system keep their shells closed when subjected to high concentrations of total suspended solids; concentrations of total suspended solids below 200 mg/L do not induce oxidative stress, changes in behavior or histological alterations in C. gasar oysters cultivated in a biofloc system. Full article

The constant production of solids in intensive shrimp and tilapia culture can affect the performance of macroalgae when cultivated in an integrated system, and little is known about culture structures that enhance the performance of macroalgae in biofloc systems. The objective of this work was to evaluate different depths of culture structure for the macroalgae Ulva lactuca in an integrated system with Litopenaeus vannamei and Oreochromis niloticus in a biofloc system. The experiment lasted 70 days, with six systems composed of: a 16 m³ shrimp tank, a 3 m³ tilapia tank, and a 3 m³ macroalgae tank, with water recirculation between tanks. Two treatments were carried out, shallow float, with a structural depth of 10 cm, and bottom float, where the depth was kept at 30 cm from the surface. The shallow float resulted in a growth rate of up to 0.95 ± 0.54% day⁻¹, with biomass loss only at the end of the culture due to the high density of macroalgae, decreasing temperature, and increasing solids concentration. The bottom float had biomass loss throughout the culture cycle. The integrated culture of shrimp, fish, and macroalgae is feasible with the use of shallow floats within 10 cm from the surface. Full article

In this study, a group of large-scale biofloc shrimp culturing facilities were designed. The bioflocs were domesticated by continuously reducing the ratio of carbon to feed. The bacterial community diversity on the 20th, 40th, 60th, and 80th days was analyzed by high-throughput sequencing technology. The results showed that the biofloc content (0~16.8 ± 4.3) mL/L, TSS concentration (0~247.46 ± 27.3) mL/L, total ammonia nitrogen concentration (0~0.28 ± 0.052) mg/L, nitrite nitrogen concentration (0~4.13 ± 1.42) mg/L, nitrate nitrogen concentration (108.57 ± 19.6) mg/L were all within the safe concentration range of Litopenaeus vannamei. With the progress of reducing carbon input, the Chao1 index, the number of operational taxonomic units, and the Shannon index increased significantly. The number of OTUs of B80 (572.36 ± 13.26) was significantly higher than that of B60 (489.69 ± 12.97), B40 (423.35 ± 18.46) and B20 (407.67 ± 15.65) (p < 0.05). The Chao1 index of B80 (768.58 ± 36.96) was significantly higher than that of B60 (646.8 ± 52.53), B40 (569.7 ± 46.53) and B20 (516.3 ± 21.35) (p < 0.05). The Shannon index of B80 (5.63 ± 0.16) was higher than that of B60 (4.85 ± 0.13), B40 (4.68 ± 0.21) and B20 (3.65 ± 0.22), with significant difference (p < 0.05). At the end of the experiment, the domestication formed a micro-ecosystem with Proteobacteria as the carrier (46.98 ± 15.82%), Chloroflexi as the skeleton (2.2 ± 0.36%), Nitrospirae (1.35 ± 0.26%) as the main water treatment functional bacteria, and other bacteria as auxiliary nitrogen and phosphorus removal; At the genus level, unclassified_f_Rhodobacteracea (22.97 ± 3.82%), Ruegeria (10.35 ± 1.26%), Muricauda (5.73 ± 0.61%), Algoriphagus (3.75% ± 0.85%) and Nitrospira (1.56 ± 0.56%) are the dominant bacteria. Under the synergistic effect of the above bacteria, the biofloc system remains relatively stable. The survival rate and unit yield of shrimp were (65.32 ± 6.85)% and (4.15 ± 1.58) kg/m³, respectively. Full article

The mycelium biofloc bioaugmented by Cordyceps strain C058 effectively purifies water, which may be related to the synthesis of extracellular polymer substances. To verify this conjecture, we analyzed the changes in extracellular polymer substances content in the mycelium biofloc under various hydraulic retention times (36 h, 18 h, and 11 h). The microstructure and microflora composition were analyzed using a scanning electron microscope and high-throughput sequencing. The ordinary biofloc without bioaugmentation was taken as a control. The results showed that under the above hydraulic retention time, the extracellular polymer substances contents of the mycelium biofloc were 51.20, 55.89, and 33.84 mg/g, respectively, higher than that of the ordinary biofloc (14.58, 15.72, and 18.19 mg/g). The protein content or the polysaccharide content also followed the same trend. Meanwhile, the sedimentation performance of the mycelium biofloc was better than that of the ordinary biofloc, attributed to the content of the extracellular polymer substances. It is worth noting that C058 is the main biofloc content, which promotes the synthesis of extracellular polymer substances in the mycelium biofloc. Other functional microorganisms in the mycelium biofloc were Janthinobacterium, Phormidium, Leptolyngbya, Hymenobacter, and Spirotrichea, which also promote the synthesis of extracellular polymer substances. Full article

To understand the long-term stability of nitrifying granules in a membrane bioreactor (GMBR), a membrane module was submerged in an airlift reactor to eliminate the hydraulic selection pressure that was believed to be the driving force of aerobic granulation. The long-term monitoring results showed that the structure of nitrifying granules could remain stable for 305 days in the GMBR without hydraulic selection pressure; however, the majority of the granule structure was actually inactive due to mass diffusion limitation. As a consequence, active biomass free of mass diffusion limitation only inhabited the top 60–80 µm layer of the nitrifying granules. There was a dynamic equilibrium between bioflocs and membrane, i.e., 25% of bioflocs attached on the membrane surface within the last nine days of the backwash cycle in synchronization with the emergence of a peak of soluble extracellular polymeric substances (sEPS), with a concentration of around 47 mg L⁻¹. Backwash can eventually detach and return these bioflocs to the bulk solution. However, the rate of membrane fouling did not change with and without the biofloc attachment. In a certain sense, the GMBR investigated in this study functioned in a similar fashion as an integrated fixed-film activated sludge membrane bioreactor and thus defeated the original purpose of GMBR development. The mass diffusion problem and sEPS production should be key areas of focus in future GMBR research. Full article

Application of biofloc technology could effectively treat wastewater. However, the effect of influent carbon to nitrogen ratio (C/N ratio) on water quality and microbial community structure evolution in suspended growth bioreactors (SGBRs) through biofloc technology is still unclear. Here, we show that the total ammonia nitrogen (TAN) and nitrite nitrogen in the effluent of the C/N 10 treatment was significantly higher than that in the C/N 15, C/N 20 and C/N 25 treatments (p < 0.05). Higher TAN removal efficiency was obtained in treatments of C/N 15, C/N 20 and C/N 25, and there was no accumulation of nitrite nitrogen and nitrate nitrogen. Increasing the C/N ratio strengthened the elimination ability of total phosphorus and chemical oxygen demand (COD). The concentrations of TAN and COD first dropped to the lowest level and then increased slightly within one cycle in all treatments. The accumulation of biomass in the reactors increased with the increasing C/N ratio, indicating that a higher C/N ratio was conducive to microbial proliferation. The 16S rRNA sequencing revealed that the microbial community diversity in SGBRs was significantly higher than that in the natural wastewater (P0). The predominant phylum were Proteobacteria, Bacteroidetes and Verrucomicrobia, but Saccharibacteria occupied a dominant position in the late period of the experiment. Pathogens, such as Aeromonas, Acidovorax, Flavobacterium, and Malikia were significantly decreased after high C/N ratio simulative wastewater treating natural wastewater in the reactors. In summary, the water quality and biomass concentrations in SGBRs can be improved under the conditions of influent C/N ratio, equal to or greater than 15. Full article