Search Results (21)

Potatoes are the most extensively cultivated vegetable crop in Canada and rank as the fifth largest primary agricultural commodity. Given their diverse end uses and significant market value, particularly in processed forms, ensuring consistent quality from harvest to consumption is of critical importance. Total glycoalkaloids (TGA) are nitrogen-containing secondary metabolites that are known to accumulate in the tuber as an effect of greening in-field or elsewhere in the supply chain. In this study, 210 Yukon Gold (YG) potatoes were exposed to a constant light source to green over a period of 14 days and sampled in 7-day intervals. The samples were scanned using a short-wave infrared (SWIR) hyperspectral imaging camera in the 900–2500 nm wavelength range. Once individually scanned, pixel-wise spectral data was extracted and averaged for each tuber and matched with its respective ground truth TGA values which were obtained using a High-Performance Liquid Chromatography (HPLC) system. Prediction models using the partial least squares regression technique were developed from the extracted hyperspectral data and reference TGA values. Wavelength selection techniques such as competitive adaptive re-weighted sampling (CARS) and backward elimination (BE) were deployed to reduce the number of contributing wavelengths for practical applications. The best model resulted in a correlation coefficient of cross-validation (R²_cv) of 0.72 with a root mean square error of cross-validation (RMSE_cv) of 51.50 ppm. Full article

Hyperspectral technology has been widely applied to the retrieval of soil properties, such as soil organic matter (SOM) and particle size distribution (PSD). However, most previous studies have focused on hyperspectral data acquired from the nadir direction, and the influence of viewing geometry on hyperspectral-based soil property retrieval remains unclear. In this study, bidirectional reflectance factors (BRFs) were collected at 48 different viewing angles for 154 soil samples with varying SOM contents and PSDs. SOM and PSD were then retrieved using combinations of ten spectral preprocessing methods (raw reflectance, Savitzky–Golay filter (SG), first derivative (D1), second derivative (D2), standard normal variate (SNV), multiplicative scatter correction (MSC), SG + D1, SG + D2, SG + SNV, and SG + MSC), one sensitive wavelength selection method, and three retrieval algorithms (partial least squares regression (PLSR), support vector machine (SVM), and convolutional neural networks (CNNs)). The influence of viewing geometry on the selection of spectral preprocessing methods, retrieval algorithms, sensitive wavelengths, and retrieval accuracy was systematically analyzed. The results showed that soil BRFs are influenced by both soil properties and viewing angles. The viewing geometry had limited effects on the choice of preprocessing method and retrieval algorithm. Among the preprocessing methods, D1, SG + D1, and SG + D2 outperformed the others, while PLSR achieved a higher accuracy than SVM and CNN when retrieving soil properties. The selected sensitive wavelengths for both SOM and PSD varied slightly with viewing angle and were mainly located in the near-infrared region when using BRFs from multiple viewing angles. Compared with single-angle data, multi-angle BRFs significantly improved retrieval performance, with the R² increasing by 11% and 15%, and RMSE decreasing by 16% and 30% for SOM and PSD, respectively. The optimal viewing zenith angle ranged from 10° to 20° for SOM and around 40° for PSD. Additionally, backward viewing directions were more favorable than forward directions, with the optimal viewing azimuth angles being 0° for SOM and 90° for PSD. These findings provide useful insights for improving the accuracy of soil property retrieval using multi-angle hyperspectral observations. Full article

This paper aimed to predict the mechanical composition of machine-picked fresh tea leaves (MPFTLs) using near-infrared spectroscopy (NIRS) rapidly and non-destructively. Samples of MPFTL with different mechanical composition ratios were collected and subjected to NIRS analysis. Subsequently, various preprocessing methods were employed to eliminate extraneous noise information. Next, characteristic spectral information was extracted using the backward interval partial least squares (biPLS) method, which was subsequently subjected to principal component analysis (PCA). Finally, a predictive model was constructed by applying the back propagation artificial neural network (BP-ANN) method, which was tested by external samples to assess its predictive efficacy, and the results were expressed as root mean square error and determination coefficient of prediction (R_p²). The optimal spectral pretreatment method was the following: (standard normal variate (SNV) + second derivative (SD)). Four characteristic spectral subintervals of ([2, 3, 7, 10]) were screened out, and the cumulative contribution rate of 95.20%, attributable to the first three principal components, was determined. When the tanh transfer function was applied to construct the BP-ANN-NIRS model, the results demonstrated optimal performance, exhibiting a root mean square error and a determination coefficient of prediction (R_p²) of 0.976 and 0.027, respectively. The absolute values of prediction deviation for all prediction set samples were found to be less than 0.04. The results of the best BP-ANN model for external samples were found to be in close agreement with those of the prediction set model. NIRS technology has successfully achieved the forecasting of the mechanical composition of machine-picked fresh tea leaves rapidly and accurately, providing a fair and convenient new method for purchasing fresh tea raw materials by machines, according to their quality, and promoting the sustainable high-quality and healthy development of the tea industry. Full article

Ginkgo is a multi-purpose economic tree species that plays a significant role in human production and daily life. The dry biomass of leaves serves as an accurate key indicator of the growth status of Ginkgo saplings and represents a direct source of economic yield. Given the characteristics of flexibility and high operational efficiency, affordable unmanned aerial vehicles (UAVs) have been utilized for estimating aboveground biomass in plantations, but not specifically for estimating leaf biomass at the individual sapling level. Furthermore, previous studies have primarily focused on image metrics while neglecting the potential of digital aerial photogrammetry (DAP) point cloud metrics. This study aims to investigate the estimation of crown-level leaf biomass in 3-year-old Ginkgo saplings subjected to different nitrogen treatments, using a synergistic approach that combines both image metrics and DAP metrics derived from UAV RGB images captured at varying flight heights (30 m, 60 m, and 90 m). In this study, image metrics (including the color and texture feature parameters) and DAP point cloud metrics (encompassing crown-level structural parameters, height-related and density-related metrics) were extracted and evaluated for modeling leaf biomass. The results indicated that models that utilized both image metrics and point cloud metrics generally outperformed those relying solely on image metrics. Notably, the combination of image metrics obtained from the 60 m flight height with DAP metrics derived from the 30 m height significantly enhanced the overall modeling performance, especially when optimal metrics were selected through a backward elimination approach. Among the regression methods employed, Gaussian process regression (GPR) models exhibited superior performance (CV-R² = 0.79, rRMSE = 25.22% for the best model), compared to Partial Least Squares Regression (PLSR) models. The common critical image metrics for both GPR and PLSR models were found to be related to chlorophyll (including G, B, and their normalized indices such as NGI and NBI), while key common structural parameters from the DAP metrics included height-related and crown-related features (specifically, tree height and crown width). This approach of integrating optimal image metrics with DAP metrics derived from multi-height UAV imagery shows great promise for estimating crown-level leaf biomass in Ginkgo saplings and potentially other tree crops. Full article

(1) Background: The effective selection of hyperspectral feature bands is pivotal in monitoring the nutritional status of intricate alpine grasslands on the Qinghai–Tibet Plateau. The traditional methods often employ hierarchical screening of multiple feature indicators, but their universal applicability suffers due to the use of a consistent methodology across diverse environmental contexts. To remedy this, a backward feature elimination (BFE) selection method has been proposed to assess indicator importance and stability. (2) Methods: As research indicators, the crude protein (CP) and chlorophyll (Chl) contents in degraded grasslands on the Qinghai–Tibet Plateau were selected. The BFE method was integrated with partial least squares regression (PLS), random forest (RF) regression, and tree-based regression (TBR) to develop CP and Chl inversion models. The study delved into the significance and consistency of the forage quality indicator bands. Subsequently, a path analysis framework (PLS-PM) was constructed to analyze the influence of grassland community indicators on Spec_Chl and Spec_CP. (3) Results: The implementation of the BFE method notably enhanced the prediction accuracy, with ΔR²_RF-Chl = 56% and ΔR²_RF-CP = 57%. Notably, spectral bands at 535 nm and 2091 nm emerged as pivotal for CP prediction, while vegetation indices like the PRI and mNDVI were critical for Chl estimation. The goodness of fit for the PLS-PM stood at 0.70, indicating the positive impact of environmental factors such as grassland cover on Spec_Chl and Spec_CP prediction (r_Chl = 0.73, r_CP = 0.39). Spec_Chl reflected information pertaining to photosynthetic nitrogen associated with photosynthesis (r = 0.80). (4) Disscusion: Among the applied model methods, the BFE+RF method is excellent in periodically discarding variables with the smallest absolute coefficient values. This variable screening method not only significantly reduces data dimensionality, but also gives the best balance between model accuracy and variables, making it possible to significantly improve model prediction accuracy. In the PLS-PM analysis, it was shown that different coverage and different community structures and functions affect the estimation of Spec_CP and Spec_Chl. In addition, Spec_Chl has a positive effect on the estimation of Spec_CP (r = 0.80), indicating that chlorophyll does reflect photosynthetic nitrogen information related to photosynthesis, but it is still difficult to obtain non-photosynthetic and compound nitrogen information. (5) Conclusions: The application of the BFE + RF method to monitoring the nutritional status of complex alpine grasslands demonstrates feasibility. The BFE filtration process, focusing on importance and stability, bolsters the system’s generalizability, resilience, and versatility. A key research avenue for enhancing the precision of CP monitoring lies in extracting non-photosynthetic nitrogen information. Full article

Biodiesel has emerged as an alternative to traditional fuels with the aim of reducing the impact on the environment. It is produced by the esterification of oleaginous seeds, animal fats, etc., with short-chain alcohols in an alkaline solution, which is one of the most commonly used methods. This increases the oxygen content (from the fatty acids) and promotes the fuel to burn faster and more efficiently. The accurate quantification of biodiesel is of paramount importance to the fuel market due to the possibility of adulteration, which can result in economic losses, engine performance issues and environmental concerns related to corrosion. In response to achieving this goal, in this work, synergy interval partial least squares (siPLS) algorithms in combination with Raman spectroscopy are used for the quantification of the biodiesel content. Different pretreatment methods are discussed to eliminate a large amount of redundant information of the original spectrum. The siPLS technique for extracting feature variables is then used to optimize the input variables after pretreatment, in order to enhance the predictive performance of the calibration model. Finally, the D1-MSC-siPLS calibration model is constructed based on the preprocessed spectra, the selected input variables and the optimized model parameters. Compared with the feature variable selection methods of interval partial least squares (iPLS) and backward interval partial least squares (biPLS), results elucidate that the D1-MSC-siPLS calibration model is superior to the D1-MSC-biPLS and the D1-MSC-iPLS in the quantitative analysis of adulterated biodiesel. The D1-MSC-siPLS calibration model demonstrates better predictive performance compared to the full spectrum PLS model, with the optimal determination coefficient of prediction (R²_P) being 0.9899; the mean relative error of prediction (MREP) decreased from 9.51% to 6.31% and the root--mean-squared error of prediction (RMSEP) decreased from 0.1912% (v/v) to 0.1367% (v/v), respectively. The above results indicate that Raman spectroscopy combined with the D1-MSC-siPLS calibration model is a feasible method for the quantitative analysis of biodiesel in adulterated hybrid fuels. Full article

Chlorophyll is an important indicator for monitoring crop growth and is vital for agricultural management. Therefore, rapid and accurate estimation of chlorophyll content is important for decision support in precision agriculture to accurately monitor the SPAD (Soil and Plant Analyzer Development) values of winter wheat. This study used winter wheat to obtain canopy reflectance based on UAV hyperspectral data and to calculate different vegetation indices and red-edge parameters. The best-performing vegetation indices and red-edge parameters were selected by Pearson correlation analysis and multiple stepwise regression (MSR). SPAD values were estimated using a combination of vegetation indices, vegetation indices and red-edge parameters as model factors, two types of machine learning (ML), a support vector machine (SVM), and a backward propagation neural network (BPNN), and partial least squares regression (PLSR) for four growth stages of winter wheat, and validated using independent samples. The results show that for the same data source, the best vegetation indices or red-edge parameters for estimating SPAD values differed at different growth stages and that combining vegetation indices with red-edge parameters gave better estimates than using only vegetation indices as an input factor for estimating SPAD values. There is no significant difference between PLSR, SVM, and BPNN methods in estimating SPAD values, with better stability of the estimated models using machine learning methods. Different growth stages have a large impact on winter wheat SPAD values estimates, with the accuracy of the four growth stage models increasing in the following order: booting < heading < filling < flowering. This study shows that using a combination of vegetation indices and red-edge parameters can improve SPAD values estimates compared to using vegetation indices alone. In the future, the choice of appropriate factors and methods will need to be considered when constructing models to estimate crop SPAD values. Full article

Apo pickle is a traditional Chinese fermented vegetable. However, the traditional fermentation process of Apo pickle is slow, easy to ruin, and cannot be judged with regard to time. To improve fermentation, LP-165 (L. Plantarum), which has a high salt tolerance, acidification, and growth capacity, was chosen as the starter culture. Meanwhile, a colorimetric sensor array (CSA) sensitive to pickle volatile compounds was developed to differentiate Apo pickles at varying degrees of fermentation. The color components were extracted from each dye in the color change profiles and were analyzed using principal component analysis (PCA) and linear discriminant analysis (LDA). The fermentation process of the Apo pickle was classified into four phases by LDA. The accuracy of backward substitution verification was 99% and the accuracy of cross validation was 92.7%. Furthermore, the partial least squares regression (PLSR) showed that data from the CSA were correlated with pH total acid, lactic acid, and volatile acids of the Apo pickle. These results illustrate that the CSA reacts quickly to inoculated Apo pickle and could be used to detect fermentation. Full article

Lushan Yunwu Tea is one of a unique Chinese tea series, and total polyphenols (TP), free amino acids (FAA), and polyphenols-to-amino acids ratio models (TP/FAA) represent its most important taste-related indicators. In this work, a feasibility study was proposed to simultaneously predict the authenticity identification and taste-related indicators of Lushan Yunwu tea, using near-infrared spectroscopy combined with multivariate analysis. Different waveband selections and spectral pre-processing methods were compared during the discriminant analysis (DA) and partial least squares (PLS) model-building process. The DA model achieved optimal performance in distinguishing Lushan Yunwu tea from other non-Lushan Yunwu teas, with a correct classification rate of up to 100%. The synergy interval partial least squares (siPLS) and backward interval partial least squares (biPLS) algorithms showed considerable advantages in improving the prediction performance of TP, FAA, and TP/FAA. The siPLS algorithms achieved the best prediction results for TP (R_P = 0.9407, RPD = 3.00), FAA (R_P = 0.9110, RPD = 2.21) and TP/FAA (R_P = 0.9377, RPD = 2.90). These results indicated that NIR spectroscopy was a useful and low-cost tool by which to offer definitive quantitative and qualitative analysis for Lushan Yunwu tea. Full article

The contents of cellulose and hemicellulose (C and H) in corn stover (CS) have an important influence on its biochemical transformation and utilization. To rapidly detect the C and H contents in CS by near-infrared spectroscopy (NIRS), the characteristic wavelength selection algorithms of backward partial least squares (BIPLS), competitive adaptive reweighted sampling (CARS), BIPLS combined with CARS, BIPLS combined with a genetic simulated annealing algorithm (GSA), and CARS combined with a GSA were used to select the wavelength variables (WVs) for C and H, and the corresponding regression correction models were established. The results showed that five wavelength selection algorithms could effectively eliminate irrelevant redundant WVs, and their modeling performance was significantly superior to that of the full spectrum. Through comparison and analysis, it was found that CARS combined with GSA had the best comprehensive performance; the predictive root mean squared errors of the C and H regression model were 0.786% and 0.893%, and the residual predictive deviations were 3.815 and 12.435, respectively. The wavelength selection algorithm could effectively improve the accuracy of the quantitative analysis of C and H contents in CS by NIRS, providing theoretical support for the research and development of related online detection equipment. Full article

Aggregate financial conditions indices (FCIs) are constructed to fulfil two aims: (i) The FCIs should resemble non-model-based composite indices in that their composition is adequately invariant for concatenation during regular updates; (ii) the concatenated FCIs should outperform financial variables conventionally used as leading indicators in macro models. Both aims are shown to be attainable once an algorithmic modelling route is adopted to combine leading indicator modelling with the principles of partial least-squares (PLS) modelling, supervised dimensionality reduction, and backward dynamic selection. Pilot results using US data confirm the traditional wisdom that financial imbalances are more likely to induce macro impacts than routine market volatilities. They also shed light on why the popular route of principal-component based factor analysis is ill-suited for the two aims. Full article

Monitoring and classification of dairy cattle behaviours is essential for optimising milk yields. Early detection of illness, days before the critical conditions occur, together with automatic detection of the onset of oestrus cycles is crucial for obviating prolonged cattle treatments and improving the pregnancy rates. Accelerometer-based sensor systems are becoming increasingly popular, as they are automatically providing information about key cattle behaviours such as the level of restlessness and the time spent ruminating and eating, proxy measurements that indicate the onset of heat events and overall welfare, at an individual animal level. This paper reports on an approach to the development of algorithms that classify key cattle states based on a systematic dimensionality reduction process through two feature selection techniques. These are based on Mutual Information and Backward Feature Elimination and applied on knowledge-specific and generic time-series extracted from raw accelerometer data. The extracted features are then used to train classification models based on a Hidden Markov Model, Linear Discriminant Analysis and Partial Least Squares Discriminant Analysis. The proposed feature engineering methodology permits model deployment within the computing and memory restrictions imposed by operational settings. The models were based on measurement data from 18 steers, each animal equipped with an accelerometer-based neck-mounted collar and muzzle-mounted halter, the latter providing the truthing data. A total of 42 time-series features were initially extracted and the trade-off between model performance, computational complexity and memory footprint was explored. Results show that the classification model that best balances performance and computation complexity is based on Linear Discriminant Analysis using features selected through Backward Feature Elimination. The final model requires 1.83 ± 1.00 ms to perform feature extraction with 0.05 ± 0.01 ms for inference with an overall balanced accuracy of 0.83. Full article

For large-scale problems, how to establish an algorithm with high accuracy and stability is particularly important. In this paper, the Householder bidiagonalization total least squares (HBITLS) algorithm and nonlinear iterative partial least squares for total least squares (NIPALS-TLS) algorithm were established, by which the same approximate TLS solutions was obtained. In addition, the propagation of the roundoff error for the process of the HBITLS algorithm was analyzed, and the mixed forward-backward stability of these two algorithms was proved. Furthermore, an upper bound of roundoff error was derived, which presents a more detailed and clearer approximation of the computed solution. Full article

Biochemical methane potential (BMP) of anaerobic co-digestion (co-AD) feedstocks is an essential basis for optimizing ratios of materials. Given the time-consuming shortage of conventional BMP tests, a rapid estimated method was proposed for BMP of co-AD—with straw and feces as feedstocks—based on near infrared spectroscopy (NIRS) combined with chemometrics. Partial least squares with several variable selection algorithms were used for establishing calibration models. Variable selection methods were constructed by the genetic simulated annealing algorithm (GSA) combined with interval partial least squares (iPLS), synergy iPLS, backward iPLS, and competitive adaptive reweighted sampling (CARS), respectively. By comparing the modeling performances of characteristic wavelengths selected by different algorithms, it was found that the model constructed using 57 characteristic wavelengths selected by CARS-GSA had the best prediction accuracy. For the validation set, the determination coefficient, root mean square error and relative root mean square error of the CARS-GSA model were 0.984, 6.293 and 2.600, respectively. The result shows that the NIRS regression model—constructed with characteristic wavelengths, selected by CARS-GSA—can meet actual detection requirements. Based on a large number of samples collected, the method proposed in this study can realize the rapid and accurate determination of the BMP for co-AD raw materials in biogas engineering. Full article

Identifying and mapping irrigated areas is essential for a variety of applications such as agricultural planning and water resource management. Irrigated plots are mainly identified using supervised classification of multispectral images from satellite or manned aerial platforms. Recently, hyperspectral sensors on-board Unmanned Aerial Vehicles (UAV) have proven to be useful analytical tools in agriculture due to their high spectral resolution. However, few efforts have been made to identify which wavelengths could be applied to provide relevant information in specific scenarios. In this study, hyperspectral reflectance data from UAV were used to compare the performance of several wavelength selection methods based on Partial Least Square (PLS) regression with the purpose of discriminating two systems of irrigation commonly used in olive orchards. The tested PLS methods include filter methods (Loading Weights, Regression Coefficient and Variable Importance in Projection); Wrapper methods (Genetic Algorithm-PLS, Uninformative Variable Elimination-PLS, Backward Variable Elimination-PLS, Sub-window Permutation Analysis-PLS, Iterative Predictive Weighting-PLS, Regularized Elimination Procedure-PLS, Backward Interval-PLS, Forward Interval-PLS and Competitive Adaptive Reweighted Sampling-PLS); and an Embedded method (Sparse-PLS). In addition, two non-PLS based methods, Lasso and Boruta, were also used. Linear Discriminant Analysis and nonlinear K-Nearest Neighbors techniques were established for identification and assessment. The results indicate that wavelength selection methods, commonly used in other disciplines, provide utility in remote sensing for agronomical purposes, the identification of irrigation techniques being one such example. In addition to the aforementioned, these PLS and non-PLS based methods can play an important role in multivariate analysis, which can be used for subsequent model analysis. Of all the methods evaluated, Genetic Algorithm-PLS and Boruta eliminated nearly 90% of the original spectral wavelengths acquired from a hyperspectral sensor onboard a UAV while increasing the identification accuracy of the classification. Full article