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Keywords = Stylophora pistillata

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14 pages, 1328 KiB  
Article
Irradiance Level Only Moderately Affects Thermal Bleaching in the Stony Coral Stylophora pistillata
by Ronald Osinga, Emma van Veenendaal, Daniëlle S. L. Geschiere, Britt J. A. van Herpen and Saskia Oosterbroek
Oceans 2025, 6(2), 32; https://doi.org/10.3390/oceans6020032 - 4 Jun 2025
Viewed by 700
Abstract
Light is considered an important co-factor in causing thermal bleaching in photosymbiotic corals. To quantify the effects of light strength on thermal bleaching, colonies of the stony coral Stylophora pistillata were experimentally subjected to a gradual increase in temperature (1 °C per 4 [...] Read more.
Light is considered an important co-factor in causing thermal bleaching in photosymbiotic corals. To quantify the effects of light strength on thermal bleaching, colonies of the stony coral Stylophora pistillata were experimentally subjected to a gradual increase in temperature (1 °C per 4 days) under two irradiance levels: 100 and 500 µmole quanta m−2 s−1. Corals kept under the same irradiance levels at a constant temperature of 26 °C were used as controls. The apparent photochemical yield ΔF/Fm′ of Photosystem II of the coral symbionts was monitored daily as an indicator for the onset of thermal bleaching, the onset of bleaching being defined as a steep decrease in ΔF/Fm′. In heat-treated corals incubated under the high irradiance of 500 µmole quanta m−2 s−1, the onset of bleaching occurred 26 days after the start of the heat ramp, at a temperature of 33 °C. ΔF/Fm′ in corals incubated under the low irradiance of 100 µmole quanta m−2 s−1 started to drop 1 day later at the same temperature. Before and after the observed drop in ΔF/Fm′, coral samples were taken for analysis of symbiont densities and levels of chlorophyll-a. At the onset of bleaching, symbiont densities and chlorophyll-a levels in heat-treated corals were not different from those of corals kept under control conditions. Three days after the onset of bleaching, symbiont densities and levels of chlorophyll-a in heat-treated corals had substantially decreased in comparison to controls. Under low irradiance, symbiont density and chlorophyll-a content were 84% and 76% lower than controls, respectively, whereas under high irradiance, symbiont density and chlorophyll-a content were 41% and 46% lower. These data suggest that damage to the photosystem in coral symbionts is the root cause of thermal bleaching in symbiotic corals, followed later by a collapse of the symbiosis. The role of light in augmenting thermal bleaching was only moderate, with a five-fold reduction in irradiance causing only a 1-day delay in bleaching. These results suggest that temperature is the main driver of bleaching in the studied coral. Full article
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36 pages, 19294 KiB  
Article
Red Sea Coral Reef Monitoring Site in Sudan after 39 Years Reveals Stagnant Reef Growth, Continuity and Change
by Sarah Abdelhamid, Götz B. Reinicke, Rebecca Klaus, Johannes Höhn, Osama S. Saad and Görres Grenzdörffer
Diversity 2024, 16(7), 379; https://doi.org/10.3390/d16070379 - 29 Jun 2024
Viewed by 3832
Abstract
Coral reefs off the coast of the Republic of Sudan are still considered to be among the most pristine reefs in the central Red Sea. The complex coastal fringing reefs, offshore banks, and shoals of Dungonab Bay in the north and Sanganeb atoll [...] Read more.
Coral reefs off the coast of the Republic of Sudan are still considered to be among the most pristine reefs in the central Red Sea. The complex coastal fringing reefs, offshore banks, and shoals of Dungonab Bay in the north and Sanganeb atoll situated further to the south, about 23 km off the Sudanese mainland coast, were inscribed on the UNESCO World Heritage List in 2016. Due to their remote location and limited access, monitoring of the status of the reefs has been sporadic. Here, we present the results of a repeated large area photomosaic survey (5 m × 5 m plots) on the Sanganeb atoll, first established and surveyed in 1980, and revisited in 1991 and most recently in 2019. The 2019 survey recovered and reinstated the four original monitoring plots. Evaluation of photographic and video records from one photomosaic plot on the seaward slope of the atoll revealed general continuity of the overall community structure and composition over 39 years. Individual colonies of Echinopora gemmacea and Lobophyllia erythraea were recorded in the exact same positions as in the 1980 and 1991 plots. The genera Acropora and Pocillopora remain dominant, although in altered proportions. Shifts in composition were detected at the species level (e.g., increase in Pocillopora verrucosa, Stylophora pistillata, Acropora hemprichii, Dipsastraea pallida, and Echinopora gemmacea, decrease in Acropora cytherea and A. superba), in addition to changes in the extent of uncolonized substrate (e.g., increase from 43.9% in 1980 to 52.2% in 2019), and other scleractinian, hydrozoan, and soft coral living cover. While the temporal resolution only includes three sampling events over 39 years (1980, 1991, 2019), this study presents one of the longest time series of benthic community surveys available for the entire Red Sea. A semi-quantitative estimate of vertical reef growth in the studied test plot indicates a reduction in net accretion rates of more than 80%, from 2.27 to 2.72 cm/yr between 1980 and 1991 to 0.28–0.42 cm/yr between 1991 and 2019. We carefully conclude that the changes observed in the coral community in the plot in 2019 (Acropora–Pocillopora shift, increase in Montipora and calcareous algae) are representative of impacts at the community level, including rising sea surface temperatures and recent bleaching events. Full article
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20 pages, 9826 KiB  
Article
Coral Tissue Regeneration and Growth Is Associated with the Presence of Stem-like Cells
by Jonathan Levanoni, Amalia Rosner, Ziva Lapidot, Guy Paz and Baruch Rinkevich
J. Mar. Sci. Eng. 2024, 12(2), 343; https://doi.org/10.3390/jmse12020343 - 17 Feb 2024
Cited by 4 | Viewed by 3001
Abstract
Members of the Cnidaria phylum were studied for centuries to depict the source of their unprecedented regeneration capacity. Although adult stem cells (ASCs) have been recognized in tissue growth/regeneration in many hydrozoans, there has not been any evidence of them in the ancestral [...] Read more.
Members of the Cnidaria phylum were studied for centuries to depict the source of their unprecedented regeneration capacity. Although adult stem cells (ASCs) have been recognized in tissue growth/regeneration in many hydrozoans, there has not been any evidence of them in the ancestral Anthozoa class. This study sheds light on the development of epidermal epithelium expansion, akin to blastema, during tissue regeneration after small circular incisions (each 2.77 mm2) and during the natural expansion of tissue across a flat surface in the scleractinian coral Stylophora pistillata. Regeneration was completed within 9 days in 84.5% (n = 64) of the assays. About 35% of the samples regrew a single polyp, 60% showed no polyp regrowth, and approximately 6% exhibited multiple new polyps. We further used histological staining, pH3, Piwi immuno-histochemistry, and qPCR for eight stemness markers: Piwi-1, Nanos-1, Nanos-1-like, Tudor-5, Tudor-7, Boule, Sox-2, and Myc-1. The results revealed the formation of an “addendum”, an epidermal epithelium in the growing edges (in regenerating and normal-growing fronts) inhabited by a cluster of small cells featuring dense nuclei, resembling ASCs, many expressing pH3 as well as Piwi proteins. Most of the stemness genes tested were upregulated. These results indicate the participation of ASCs-like cells in tissue regeneration and growth in scleractinian corals. Full article
(This article belongs to the Section Marine Biology)
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15 pages, 4009 KiB  
Article
Population Genetics Assessment of the Model Coral Species Stylophora pistillata from Eilat, the Red Sea
by Elad Nehoray Rachmilovitz, Jacob Douek and Baruch Rinkevich
J. Mar. Sci. Eng. 2024, 12(2), 315; https://doi.org/10.3390/jmse12020315 - 12 Feb 2024
Cited by 2 | Viewed by 2394
Abstract
The successful management of coral reefs necessitates understanding the genetic characteristics of reefs’ populations since levels of genetic diversity play a critical role in their resilience, enabling them to withstand environmental changes with greater efficacy. To assess the genetic diversity and connectivity of [...] Read more.
The successful management of coral reefs necessitates understanding the genetic characteristics of reefs’ populations since levels of genetic diversity play a critical role in their resilience, enabling them to withstand environmental changes with greater efficacy. To assess the genetic diversity and connectivity of the widespread Indo-Pacific coral, Stylophora pistillata, eight microsatellite loci were employed on 380 tissue samples collected from eight sites along the northern Gulf of Eilat, Red Sea. We documented deviations from the Hardy–Weinberg equilibrium and observed low heterozygosity and high values of expected heterozygosity (0.59 and 0.82, respectively). The relatively high FST values and STRUCTURE analysis results showed population fragmentation along the short coastline (<12 km). These results signify isolation by distance, low gene flow between most populations, and possible non-random mating. These results are connected to this species’ sexual reproduction traits, a brooding coral species with planulae that settle shortly upon release with limited connectivity that are most probably further exacerbated by anthropogenic impacts imposed on Eilat’s reefs. This study provides insights into the connectivity and population genetics of S. pistillata residing in an urbanized northern Red Sea reef and reinforces the need for better management of the current MPA, employing future active coral reef restoration in the area. Full article
(This article belongs to the Section Marine Biology)
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15 pages, 3774 KiB  
Article
Three-Dimensional-Printed Coral-like Structures as a Habitat for Reef Fish
by Asa Oren, Ofer Berman, Reem Neri, Ezri Tarazi, Haim Parnas, Offri Lotan, Majeed Zoabi, Noam Josef and Nadav Shashar
J. Mar. Sci. Eng. 2023, 11(4), 882; https://doi.org/10.3390/jmse11040882 - 21 Apr 2023
Cited by 7 | Viewed by 4408
Abstract
Coral reefs are three-dimensional biogenic structures that provide habitat for plenty of marine organisms; yet, coral reefs are deteriorating worldwide. Hence, it is essential to identify suitable substitutes for such coral services. This study examines reef fishes’ behavior and reactions to three-dimensional-printed (3DP) [...] Read more.
Coral reefs are three-dimensional biogenic structures that provide habitat for plenty of marine organisms; yet, coral reefs are deteriorating worldwide. Hence, it is essential to identify suitable substitutes for such coral services. This study examines reef fishes’ behavior and reactions to three-dimensional-printed (3DP) corals based on scanned Stylophora pistillata, as well as modified 3DP models. In particular, fishes’ unresponsiveness to the color, shape, morphology, and material of 3DP models both in vitro and in situ experiments was investigated. Coral reef fishes responded to the 3DP corals and demonstrated their usage in a range of services. Moreover, a greater number of fish species interacted more with 3DP models than they did with live corals. Furthermore, specific reef fish species, such as Sea Goldies (Pseudanthias squamipinnis), showed a preference for specific 3DP coral color, and other species demonstrated preferences for specific 3DP model shapes. The current study results show that three-dimensional-printed coral models can substitute for live corals for certain types of reef fish services. Full article
(This article belongs to the Topic Marine Ecology, Environmental Stress and Management)
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7 pages, 645 KiB  
Brief Report
New Microsatellite Markers for the Model Coral Species Stylophora pistillata from Eilat, the Red Sea
by Jacob Douek, Elad Nehoray Rachmilovitz and Baruch Rinkevich
J. Mar. Sci. Eng. 2023, 11(2), 244; https://doi.org/10.3390/jmse11020244 - 18 Jan 2023
Cited by 1 | Viewed by 2307
Abstract
Nineteen microsatellite loci, obtained by the whole genome sequencing approach, were developed and validated for the ‘smooth cauliflower’ coral Stylophora pistillata, a widespread Indo Pacific branching coral species. A sample size of 40 colonies collected at five reef sites along the northern [...] Read more.
Nineteen microsatellite loci, obtained by the whole genome sequencing approach, were developed and validated for the ‘smooth cauliflower’ coral Stylophora pistillata, a widespread Indo Pacific branching coral species. A sample size of 40 colonies collected at five reef sites along the northern Gulf of Eilat, the Red Sea, were genotyped, revealing loci reproducibly and suitable outcomes for wide applications, including population genetic studies. The 19 new microsatellite loci in this sample were composed of 4–20 alleles/locus, of which 10 microsatellites are highly polymorphic (≥10 alleles/locus). The observed and expected heterozygosity ranged between 0.289 and 0.957 (mean 0.597) and 0.101 and 0.911 (mean 0.726), respectively, and the Fixation Index (F), which also indicates the inbreeding coefficient, ranges between −0.174 and 0.569 (mean 0.207). The polymorphic information content (PIC) ranges between 0.100 and 0.904 (mean 0.699). This new set of microsatellite loci will be employed for population genetics studies as for identifying the distribution of various genotypes within S. pistillata chimeras. Full article
(This article belongs to the Special Issue Feature Papers in Marine Biology)
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32 pages, 14134 KiB  
Review
Red Sea Atlas of Coral-Associated Bacteria Highlights Common Microbiome Members and Their Distribution across Environmental Gradients—A Systematic Review
by Nathalia Delgadillo-Ordoñez, Inês Raimundo, Adam R. Barno, Eslam O. Osman, Helena Villela, Morgan Bennett-Smith, Christian R. Voolstra, Francesca Benzoni and Raquel S. Peixoto
Microorganisms 2022, 10(12), 2340; https://doi.org/10.3390/microorganisms10122340 - 26 Nov 2022
Cited by 6 | Viewed by 5217
Abstract
The Red Sea is a suitable model for studying coral reefs under climate change due to its strong environmental gradient that provides a window into future global warming scenarios. For instance, corals in the southern Red Sea thrive at temperatures predicted to occur [...] Read more.
The Red Sea is a suitable model for studying coral reefs under climate change due to its strong environmental gradient that provides a window into future global warming scenarios. For instance, corals in the southern Red Sea thrive at temperatures predicted to occur at the end of the century in other biogeographic regions. Corals in the Red Sea thrive under contrasting thermal and environmental regimes along their latitudinal gradient. Because microbial communities associated with corals contribute to host physiology, we conducted a systematic review of the known diversity of Red Sea coral-associated bacteria, considering geographic location and host species. Our assessment comprises 54 studies of 67 coral host species employing cultivation-dependent and cultivation-independent techniques. Most studies have been conducted in the central and northern Red Sea, while the southern and western regions remain largely unexplored. Our data also show that, despite the high diversity of corals in the Red Sea, the most studied corals were Pocillopora verrucosa, Dipsastraea spp., Pleuractis granulosa, and Stylophora pistillata. Microbial diversity was dominated by bacteria from the class Gammaproteobacteria, while the most frequently occurring bacterial families included Rhodobacteraceae and Vibrionaceae. We also identified bacterial families exclusively associated with each of the studied coral orders: Scleractinia (n = 125), Alcyonacea (n = 7), and Capitata (n = 2). This review encompasses 20 years of research in the Red Sea, providing a baseline compendium for coral-associated bacterial diversity. Full article
(This article belongs to the Special Issue Microbiomes of Aquatic Organisms)
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16 pages, 4012 KiB  
Article
Trapezia Crabs That Dwell in Distinctive Day/Night Canopy Compartments of a Marine Animal Forest, Forage on Demersal Plankton
by Yaniv Shmuel, Yaron Ziv and Baruch Rinkevich
J. Mar. Sci. Eng. 2022, 10(10), 1522; https://doi.org/10.3390/jmse10101522 - 18 Oct 2022
Cited by 3 | Viewed by 2567
Abstract
Canopies of branching corals harbor a wide range of sessile- and mobile-dwelling species that benefit from the physical compartments and the micro-environments created by the complex three-dimensional structures. Although different compartments within canopies are differentially used by inhabitant species, the distribution of mobile [...] Read more.
Canopies of branching corals harbor a wide range of sessile- and mobile-dwelling species that benefit from the physical compartments and the micro-environments created by the complex three-dimensional structures. Although different compartments within canopies are differentially used by inhabitant species, the distribution of mobile animals between coral canopy compartments are not fully explored. Here, we study Stylophora pistillata, a common branching coral in the Gulf of Eilat that harbors obligatory crabs from the family Trapezia. Two in situ surveys elucidated diel dynamics in compartmental distributions of Trapezia species within S. pistillata canopies compartments, associated with the crab’s body size and day/night activities. Whereas all crabs were found within sheltered spaces in the coral canopy understory or in the base during day hours, laboratory experiments revealed that nighttime distributions of small and large crabs (in middle and up compartments, respectively) are not intraspecific competition-borne, but rather, the outcome of preferred crab-size location for a novel feeding type, predation on demersal plankton. This study, thus, disclosed the importance of studying the coral’s three-dimensional structures and within canopies’ compartments for understanding the biology of dwelling species in the animal forests’ canopies. Full article
(This article belongs to the Special Issue Benthic Species and Habitats)
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23 pages, 3156 KiB  
Article
Impacts of Warming and Acidification on Coral Calcification Linked to Photosymbiont Loss and Deregulation of Calcifying Fluid pH
by Louise P. Cameron, Claire E. Reymond, Jelle Bijma, Janina V. Büscher, Dirk De Beer, Maxence Guillermic, Robert A. Eagle, John Gunnell, Fiona Müller-Lundin, Gertraud M. Schmidt-Grieb, Isaac Westfield, Hildegard Westphal and Justin B. Ries
J. Mar. Sci. Eng. 2022, 10(8), 1106; https://doi.org/10.3390/jmse10081106 - 12 Aug 2022
Cited by 10 | Viewed by 4863
Abstract
Corals are globally important calcifiers that exhibit complex responses to anthropogenic warming and acidification. Although coral calcification is supported by high seawater pH, photosynthesis by the algal symbionts of zooxanthellate corals can be promoted by elevated pCO2. To investigate the mechanisms [...] Read more.
Corals are globally important calcifiers that exhibit complex responses to anthropogenic warming and acidification. Although coral calcification is supported by high seawater pH, photosynthesis by the algal symbionts of zooxanthellate corals can be promoted by elevated pCO2. To investigate the mechanisms underlying corals’ complex responses to global change, three species of tropical zooxanthellate corals (Stylophora pistillata, Pocillopora damicornis, and Seriatopora hystrix) and one species of asymbiotic cold-water coral (Desmophyllum pertusum, syn. Lophelia pertusa) were cultured under a range of ocean acidification and warming scenarios. Under control temperatures, all tropical species exhibited increased calcification rates in response to increasing pCO2. However, the tropical species’ response to increasing pCO2 flattened when they lost symbionts (i.e., bleached) under the high-temperature treatments—suggesting that the loss of symbionts neutralized the benefit of increased pCO2 on calcification rate. Notably, the cold-water species that lacks symbionts exhibited a negative calcification response to increasing pCO2, although this negative response was partially ameliorated under elevated temperature. All four species elevated their calcifying fluid pH relative to seawater pH under all pCO2 treatments, and the magnitude of this offset (Δ[H+]) increased with increasing pCO2. Furthermore, calcifying fluid pH decreased along with symbiont abundance under thermal stress for the one species in which calcifying fluid pH was measured under both temperature treatments. This observation suggests a mechanistic link between photosymbiont loss (‘bleaching’) and impairment of zooxanthellate corals’ ability to elevate calcifying fluid pH in support of calcification under heat stress. This study supports the assertion that thermally induced loss of photosymbionts impairs tropical zooxanthellate corals’ ability to cope with CO2-induced ocean acidification. Full article
(This article belongs to the Special Issue The Effect of Ocean Acidification on Skeletal Structures)
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20 pages, 4636 KiB  
Article
Effect of Various Local Anthropogenic Impacts on the Diversity of Coral Mucus-Associated Bacterial Communities
by Emad I. Hussein, Abdul-Salam F. Juhmani, Jacob H. Jacob, Mahmoud A. Telfah, Mutaz A. Abd Al-razaq, Fuad A. Al-Horani, Mazhar Salim Al Zoubi and Hanan I. Malkawi
J. Mar. Sci. Eng. 2022, 10(7), 863; https://doi.org/10.3390/jmse10070863 - 24 Jun 2022
Cited by 6 | Viewed by 3185
Abstract
The global continued decline in coral reefs is intensifying the need to understand the response of corals to local environmental stressors. Coral-associated bacterial communities have been suggested to have a swift response to environmental pollutants. This study aims to determine the variation in [...] Read more.
The global continued decline in coral reefs is intensifying the need to understand the response of corals to local environmental stressors. Coral-associated bacterial communities have been suggested to have a swift response to environmental pollutants. This study aims to determine the variation in the bacterial communities associated with the mucus of two coral species, Pocillopora damicornis (Linnaeus, 1758) and Stylophora pistillata (Esper, 1792), and the coral-surrounding seawater from three areas exposed to contamination at the Jordanian coast of the Gulf of Aqaba (Red Sea), and also explores the antibacterial activity of these bacteria. Corals were collected from three contaminated zones along the coast, and the bacteria were quantified and identified by conventional morphological and biochemical tests, as well as 16S rRNA gene sequencing. The average number of bacteria significantly varied among the coral mucus from the sampling zones and between the coral mucus and the surrounding seawater. The P. damicornis mucus-associated bacterial community was dominated by members of the classes Gammaproteobacteria, Cytophagia, and Actinomycetia, while the mucus of S. pistillata represented higher bacterial diversity, with the dominance of the bacterial classes Gammaproteobacteria, Actinomycetia, Alphaproteobacteria, and Bacilli. The effects of local anthropogenic impacts on coral mucus bacterial communities were represented in the increased abundance of bacterial species related to coral diseases. Furthermore, the results demonstrated the existence of bacterial isolates with antibacterial activity that possibly acted as a first line of defense to protect and maintain the coral host against pathogens. Indeed, the dynamics of coral-associated microbial communities highlight the importance of holistic studies that focus on microbial interactions across the coral reef ecosystem. Full article
(This article belongs to the Special Issue The Impact of Changes in the Marine Environment on Marine Organisms)
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13 pages, 2087 KiB  
Article
Ingestion of Diazotrophs Makes Corals More Resistant to Heat Stress
by Valentine Meunier, Sophie Bonnet, Mercedes Camps, Mar Benavides, Jeff Dubosc, Riccardo Rodolfo-Metalpa and Fanny Houlbrèque
Biomolecules 2022, 12(4), 537; https://doi.org/10.3390/biom12040537 - 2 Apr 2022
Cited by 6 | Viewed by 3889
Abstract
Over the past decade, coral bleaching events have continued to recur and intensify. During bleaching, corals expel millions of their symbionts, depriving the host from its main food source. One mechanism used by corals to resist bleaching consists in exploiting food sources other [...] Read more.
Over the past decade, coral bleaching events have continued to recur and intensify. During bleaching, corals expel millions of their symbionts, depriving the host from its main food source. One mechanism used by corals to resist bleaching consists in exploiting food sources other than autotrophy. Among the food sources available in the reefs, dinitrogen (N2)-fixing prokaryotes or planktonic diazotrophs (hereafter called ‘PD’) have the particularity to reduce atmospheric dinitrogen (N2) and release part of this nitrogen (diazotroph-derived nitrogen or DDN) in bioavailable form. Here, we submitted coral colonies of Stylophora pistillata, fed or not with planktonic diazotrophs, to a temperature stress of up to 31 ± 0.5 °C and measured their physiological responses (photosynthetic efficiency, symbiont density, and growth rates). Heat-unfed colonies died 8 days after the heat stress while heat-PD-fed corals remained alive after 10 days of heat stress. The supply of PD allowed corals to maintain minimal chlorophyll concentration and symbiont density, sustaining photosynthetic efficiency and stimulating coral growth of up to 48% compared to unfed ones. By providing an alternative source of bioavailable nitrogen and carbon, this specific planktonic diazotroph feeding may have a profound potential for coral bleaching recovery. Full article
(This article belongs to the Special Issue Invertebrates as Emerging Model Organisms in Nutrition Research)
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19 pages, 5587 KiB  
Article
Artificial Intelligence as a Tool to Study the 3D Skeletal Architecture in Newly Settled Coral Recruits: Insights into the Effects of Ocean Acidification on Coral Biomineralization
by Federica Scucchia, Katrein Sauer, Paul Zaslansky and Tali Mass
J. Mar. Sci. Eng. 2022, 10(3), 391; https://doi.org/10.3390/jmse10030391 - 9 Mar 2022
Cited by 6 | Viewed by 4945
Abstract
Understanding the formation of the coral skeleton has been a common subject uniting various marine and materials study fields. Two main regions dominate coral skeleton growth: Rapid Accretion Deposits (RADs) and Thickening Deposits (TDs). These have been extensively characterized at the 2D level, [...] Read more.
Understanding the formation of the coral skeleton has been a common subject uniting various marine and materials study fields. Two main regions dominate coral skeleton growth: Rapid Accretion Deposits (RADs) and Thickening Deposits (TDs). These have been extensively characterized at the 2D level, but their 3D characteristics are still poorly described. Here, we present an innovative approach to combine synchrotron phase contrast-enhanced microCT (PCE-CT) with artificial intelligence (AI) to explore the 3D architecture of RADs and TDs within the coral skeleton. As a reference study system, we used recruits of the stony coral Stylophora pistillata from the Red Sea, grown under both natural and simulated ocean acidification conditions. We thus studied the recruit’s skeleton under both regular and morphologically-altered acidic conditions. By imaging the corals with PCE-CT, we revealed the interwoven morphologies of RADs and TDs. Deep-learning neural networks were invoked to explore AI segmentation of these regions, to overcome limitations of common segmentation techniques. This analysis yielded highly-detailed 3D information about the RAD’s and TD’s architecture. Our results demonstrate how AI can be used as a powerful tool to obtain 3D data essential for studying coral biomineralization and for exploring the effects of environmental change on coral growth. Full article
(This article belongs to the Special Issue The Effect of Ocean Acidification on Skeletal Structures)
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18 pages, 4167 KiB  
Article
Strahler Ordering Analyses on Branching Coral Canopies: Stylophora pistillata as a Case Study
by Yaniv Shmuel, Yaron Ziv and Baruch Rinkevich
J. Mar. Sci. Eng. 2022, 10(1), 121; https://doi.org/10.3390/jmse10010121 - 17 Jan 2022
Cited by 7 | Viewed by 4269
Abstract
The three-dimensional structural complexities generated by living sessile organisms, such as trees and branching corals, embrace distinct communities of dwelling organisms, many of which are adapted to specific niches within the structure. Thus, characterizing the build-up rules and the canopy compartments may clarify [...] Read more.
The three-dimensional structural complexities generated by living sessile organisms, such as trees and branching corals, embrace distinct communities of dwelling organisms, many of which are adapted to specific niches within the structure. Thus, characterizing the build-up rules and the canopy compartments may clarify small-scale biodiversity patterns and rules for canopy constituents. While biodiversity within tree canopies is usually typified by the vertical axis that is delineated by its main compartments (understory, trunk, crown), traditional studies of coral canopy dwelling species are evaluated only by viewing the whole coral head as a single homogeneous geometric structure. Here, we employ the Strahler number of a mathematical tree for the numerical measurements of the coral’s canopy complexity. We use the branching Indo-Pacific coral species Stylophora pistillata as a model case, revealing five compartments in the whole coral canopy volume (Understory, Base, Middle, Up, and Bifurcation nods). Then, the coral’s dwellers’ diel distribution patterns were quantified and analyzed. We observed 114 natal colonies, containing 32 dwelling species (11 sessile), totaling 1019 individuals during day observations, and 1359 at night (1–41 individuals/colony). Biodiversity and abundance associated with Strahler numbers, diel richness, abundance, and patterns for compartmental distributions differed significantly between day/night. These results demonstrate that the coral-canopy Strahler number is an applicable new tool for assessing canopy landscapes and canopy associated species biodiversity, including the canopy-compartmental utilization by mobile organisms during day/night and young/adult behaviors. Full article
(This article belongs to the Section Marine Biology)
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20 pages, 5683 KiB  
Article
The Effects of Temperature, Light, and Feeding on the Physiology of Pocillopora damicornis, Stylophora pistillata, and Turbinaria reniformis Corals
by Kerri L. Dobson, Christine Ferrier-Pagès, Casey M. Saup and Andréa G. Grottoli
Water 2021, 13(15), 2048; https://doi.org/10.3390/w13152048 - 27 Jul 2021
Cited by 19 | Viewed by 4716
Abstract
Evidence has shown that individually feeding or reduced light can mitigate the negative effects of elevated temperature on coral physiology. We aimed to evaluate if simultaneous low light and feeding would mitigate, minimize, or exacerbate negative effects of elevated temperature on coral physiology [...] Read more.
Evidence has shown that individually feeding or reduced light can mitigate the negative effects of elevated temperature on coral physiology. We aimed to evaluate if simultaneous low light and feeding would mitigate, minimize, or exacerbate negative effects of elevated temperature on coral physiology and carbon budgets. Pocillopora damicornis, Stylophora pistillata, and Turbinaria reniformis were grown for 28 days under a fully factorial experiment including two seawater temperatures (ambient temperature of 25 °C, elevated temperature of 30 °C), two light levels (high light of 300 μmol photons m−2 s−1, low light of 150 μmol photons m−2 s−1), and either fed (Artemia nauplii) or unfed. Coral physiology was significantly affected by temperature in all species, but the way in which low light and feeding altered their physiological responses was species-specific. All three species photo-acclimated to low light by increasing chlorophyll a. Pocillopora damicornis required feeding to meet metabolic demand irrespective of temperature but was unable to maintain calcification under low light when fed. In T. reniformis, low light mitigated the negative effect of elevated temperature on total lipids, while feeding mitigated the negative effects of elevated temperature on metabolic demand. In S. pistillata, low light compounded the negative effects of elevated temperature on metabolic demand, while feeding minimized this negative effect but was not sufficient to provide 100% metabolic demand. Overall, low light and feeding did not act synergistically, nor additively, to mitigate the negative effects of elevated temperature on P. damicornis, S. pistillata, or T. reniformis. However, feeding alone was critical to the maintenance of metabolic demand at elevated temperature, suggesting that sufficient supply of heterotrophic food sources is likely essential for corals during thermal stress (bleaching) events. Full article
(This article belongs to the Special Issue Climate Impact on Sustainability of Aquatic Organisms)
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8 pages, 4070 KiB  
Communication
A Vital Staining Practice That Discerns Ancestry within Groups of Settling Larvae of a Brooding Coral
by Dor Shefy, Nadav Shashar and Baruch Rinkevich
J. Mar. Sci. Eng. 2021, 9(6), 616; https://doi.org/10.3390/jmse9060616 - 3 Jun 2021
Cited by 8 | Viewed by 3233
Abstract
Xenogeneic and allogeneic encounters following aggregated and clustered settlements of coral larvae (planulae) may carry important ecological consequences in shaping coral reefs’ communities. However, larval settlement behaviors and settlement location choices in the presence of conspecifics or heterospecifics have not been examined in [...] Read more.
Xenogeneic and allogeneic encounters following aggregated and clustered settlements of coral larvae (planulae) may carry important ecological consequences in shaping coral reefs’ communities. However, larval settlement behaviors and settlement location choices in the presence of conspecifics or heterospecifics have not been examined in detail, due to a lack of experimental tools. One potential approach is the employment of vital staining of planulae with dyes that do not impair larval metamorphosis processes, are stable for prolonged periods, and do not diffuse to un-labeled counterpart planulae. For these purposes, we examined the use of neutral red (NR) dye, as an identification marker, on the planulae of Stylophora pistillata, a Red Sea branching coral species. To examine possible NR impacts on larval settlement in the presence of conspecific planulae, we followed the settlement ratios of kin, non-kin, and mixed assemblages, as a proxy for metamorphosis success. We found no differences in settlement rates of stained vs. unstained larvae, lack of stain diffusion to other larvae and that NR stain is maintained for more than a week under a still water regimen. Thus, staining with NR may serve as a useful experimental tool, opening new opportunities in studying larval settlement patterns in sessile marine organisms. Full article
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