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Keywords = Shewanella baltica

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18 pages, 4093 KiB  
Article
Blue Crab (Callinectes sapidus) Haemolymph as a Potential Reservoir of Mesophilic Shewanella Species
by Giuseppe Esposito, Fabio Bondavalli, Matteo Riccardo Di Nicola, Paolo Pastorino, Sonia Scala, Martina Gini, Giulia Milanese, Edoardo Turolla, Alessandra Maganza, Simona Sciuto, Domenico Meloni, Rita Melillo, Pierluigi Acutis, Elena Bozzetta, Sebastiano Virgilio, Caterina Faggio, Silvia Colussi and Marino Prearo
Animals 2025, 15(12), 1731; https://doi.org/10.3390/ani15121731 - 11 Jun 2025
Viewed by 1402
Abstract
The blue crab (Callinectes sapidus) is an invasive alien species in the Mediterranean Sea, posing threats to biodiversity, fisheries, and aquaculture. Climate change has worsened these challenges, influencing the distribution of bacterial species, including Shewanella species, which are sensitive to changes [...] Read more.
The blue crab (Callinectes sapidus) is an invasive alien species in the Mediterranean Sea, posing threats to biodiversity, fisheries, and aquaculture. Climate change has worsened these challenges, influencing the distribution of bacterial species, including Shewanella species, which are sensitive to changes in temperature and salinity. In this study, 300 blue crabs were sampled between June and October 2024 from the Sacca di Goro (Northern Adriatic Sea, Italy) to investigate the prevalence of Shewanella species in their haemolymph. The prevalence was found to be 7% (21/300), with species such as S. mesophila, S. algae, S. cowelliana, and S. baltica identified, particularly in the months of September and October. Molecular techniques, including MALDI-TOF MS and rpoB gene amplification, were used to identify isolates. Antibiotic susceptibility testing (AST) revealed a trend of resistance to beta-lactam antibiotics. A network analysis was also conducted to examine the global trends of Shewanella research in relation to humans, animals, and the marine environment. While proper cooking eliminates the risk to consumers, handling without personal protective equipment can increase exposure, particularly for vulnerable individuals such as those who are elderly or immunocompromised. Mild symptoms are observed in children. Further studies, particularly with a One Health approach, are crucial to better understand the transmission dynamics and evolving antibiotic resistance of Shewanella species. Full article
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16 pages, 1964 KiB  
Article
Integrated Metagenomic and LC–MS/MS Analysis Reveals the Biogenic Amine-Producing Strains of Two Typical Chinese Traditional Fish Products: Fermented Mandarin Fish (Siniperca chuatsi) and Semi-Dried Yellow Croaker (Larimichthys crocea)
by Xuan Zhang, Hai Chi, Di Peng, Mei Jiang, Cuihua Wang, Haiyan Zhang, Wei Kang and Lei Li
Foods 2025, 14(6), 1016; https://doi.org/10.3390/foods14061016 - 17 Mar 2025
Viewed by 606
Abstract
Two typical fish products—fermented mandarin fish and semi-dried yellow croaker—are associated with biogenic amines (BAs), which are harmful to human health. The objective of this study was to investigate the bacterial ecology of the two fish products and to determine their capacity for [...] Read more.
Two typical fish products—fermented mandarin fish and semi-dried yellow croaker—are associated with biogenic amines (BAs), which are harmful to human health. The objective of this study was to investigate the bacterial ecology of the two fish products and to determine their capacity for producing BAs. Putrescine and cadaverine were major BAs detected in the fish products. Concentrations of BAs were significantly corrected with microbial count (p < 0.05). BA-producing isolates (33) in the two fish products were all multiple BA producers. Several of them, including Lactobacillus sakei, Bacillus cereus and Hafnia alvei isolated from fermented mandarin fish, as well as Shewanella baltica, Aeromonas veronii, and Photobacterium phosphoreum isolated from semi-dried yellow croaker, showed remarkable BA-producing capacity. Hafnia alvei produced the greatest abundance of putrescine, cadaverine, tyramine and 2-phenylethylamine. Lactobacillus sakei mainly produced tryptamine and putrescine. Photobacterium phosphoreum showed the strongest histamine-producing capacity. Full article
(This article belongs to the Special Issue Quality Changes of Blue Food During Preservation and Processing)
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13 pages, 470 KiB  
Article
Evaluation of the Antimicrobial Effects of Olive Mill Wastewater Extract Against Food Spoiling/Poisoning, Fish-Pathogenic and Non-Pathogenic Microorganisms
by Dilek Kahraman Yılmaz, Fevziye Işıl Kesbiç, Ekrem Şanver Çelik, Deniz Anıl Odabaşı, Sevdan Yilmaz and Hany M. R. Abdel-Latif
Microorganisms 2024, 12(11), 2216; https://doi.org/10.3390/microorganisms12112216 - 31 Oct 2024
Cited by 2 | Viewed by 1346
Abstract
Although antibiotics are the main therapy for bacterial infections, the reports showed that the overuse (or misuse) of antibiotics will results in several problems such as the development of antibiotic-resistant strains, persistence of drug residues, and numerous environmental concerns. Therefore, finding antibiotic alternatives [...] Read more.
Although antibiotics are the main therapy for bacterial infections, the reports showed that the overuse (or misuse) of antibiotics will results in several problems such as the development of antibiotic-resistant strains, persistence of drug residues, and numerous environmental concerns. Therefore, finding antibiotic alternatives is considered of vital importance. Investigation of the antimicrobial properties of several plant substances and extracts is of great value to replace antibiotics. With this objective, this study aimed to evaluate the antimicrobial activities of an ethanolic extract prepared from olive mill wastewater (OMWW), which is a by-product of olive oil production with considerable environmental burden, against 38 bacterial strains, including fish-associated pathogens, non-pathogenic isolates, collection strains, and one yeast strain, Candida albicans. Disk diffusion, minimum inhibitory concentration (MIC), and minimum bactericidal/fungicidal concentration (MBC/MFC) tests were used to determine the antimicrobial activity of the OMWWE. According to the results, OMWWE provoked strong inhibitory effects against Shewanella baltica strain SY-S145. It also showed a moderate inhibitory effect on Plesiomonas shigelloides strain SY-PS16 and Vibrio anguillarum strain SY-L24. The MIC and MBC of OMWWE on Shewanella baltica SY-S145, Vibrio gigantis strain C24, and V. anguillarum strain SY-L24 were 500 µg/mL. The MIC and MBC on V. parahaemolyticus ATCC 17802 were 1000 µg/mL, whereas the values for Aeromonas salmonicida ATCC 33658 were 500 µg/mL and 1000 µg/mL, respectively. To put it briefly, the OMWW extract showed high antimicrobial activity and can act as an environmentally friendly additive for the control and prevention of diseases caused by A. veronii, A. hydrophila, P. shigelloides, S. baltica, V. anguillarum, and V. parahaemolyticus. Its active agents also prevented infections of both fish-associated pathogens and food spoiling bacteria, which means it can not only help in the disease control mechanism but also in improving the safety of food by reduction of the microbial contamination. Full article
(This article belongs to the Special Issue Waterborne Pathogen Infection and Antibiotic Resistance)
17 pages, 3185 KiB  
Article
Effect of pH, COD, and HRT on the Performance of Microbial Fuel Cell Using Synthetic Dairy Wastewater
by Aritro Banerjee, Rajnish Kaur Calay and Subhashis Das
Water 2023, 15(19), 3472; https://doi.org/10.3390/w15193472 - 30 Sep 2023
Cited by 18 | Viewed by 4367
Abstract
Microbial fuel cells (MFC) are emerging technologies that can produce electricity while treating wastewater. A series of tests were carried out to evaluate the efficiency of this technology for treating dairy wastewater (DWW). The experiments used Shewanella baltica as an exoelectrogen in a [...] Read more.
Microbial fuel cells (MFC) are emerging technologies that can produce electricity while treating wastewater. A series of tests were carried out to evaluate the efficiency of this technology for treating dairy wastewater (DWW). The experiments used Shewanella baltica as an exoelectrogen in a small single MFC to treat simulated DWW. The impacts of various operational factors, specifically pH, hydraulic retention time (HRT), and chemical oxygen demand (COD) in the influent to the anode chamber, were investigated, and the effect of these variables on the output performance of the cell was evaluated. The best performance of the MFC was found when the pH, HRT, and COD were 8, 6.66 h, and 20,632 mg/L, respectively, in the scaled experimental setup. Under these conditions, the maximum power density and percentage removal of COD in terms of wastewater treatment ability were found to be 138 mW/m2 and 71%, respectively. It may be concluded that MFCs are suitable treatment technologies for treating dairy wastewater while potentially simultaneously generating power. Full article
(This article belongs to the Special Issue Biological Wastewater Treatment around the Globe)
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13 pages, 2178 KiB  
Article
Characterization of a Novel Myrosinase with High Activity from Marine Bacterium Shewanella baltica Myr-37
by Qinwen Ye, Yaowei Fang, Mengjiao Li, Haoyu Mi, Shu Liu, Guang Yang, Jing Lu, Yaling Zhao, Qitong Liu, Wei Zhang and Xiaoyue Hou
Int. J. Mol. Sci. 2022, 23(19), 11258; https://doi.org/10.3390/ijms231911258 - 24 Sep 2022
Cited by 11 | Viewed by 3269
Abstract
Myrosinase can hydrolyze glucosinolates to generate isothiocyanates, which have cancer prevention and anti-cancer properties. The main sources of myrosinase are cruciferous plants. To further improve the efficiency of isothiocyanates preparation, it is necessary to explore novel sources of myrosinases. In this study, we [...] Read more.
Myrosinase can hydrolyze glucosinolates to generate isothiocyanates, which have cancer prevention and anti-cancer properties. The main sources of myrosinase are cruciferous plants. To further improve the efficiency of isothiocyanates preparation, it is necessary to explore novel sources of myrosinases. In this study, we described a bacterium, Shewanella baltica Myr-37, isolated from marine mud, capable of producing a novel myrosinase (Smyr37) with a molecular weight of 100 kDa. The crude enzyme of Smyr37 showed the highest activity at 50 °C and pH 8.0. The sinigrin- and glucoraphanin-hydrolyzing activities of Smyr37 were 6.95 and 5.87 U/mg, respectively. Moreover, when the reaction temperature was 40 °C and pH was 7.0, the crude enzyme of Smyr37 could efficiently degrade glucoraphanin into sulforaphane within 25 min with a yield of 0.57 mg/mL. The corresponding conversion efficiency of sulforaphane from glucoraphanin was 89%. In summary, S. baltica Myr-37 myrosinase Smyr37, a novel myrosinase, can be used in the preparation of isothiocyanates. Full article
(This article belongs to the Special Issue Microbial Enzymes and Metabolites)
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12 pages, 2803 KiB  
Article
Experimental Study of Power Generation and COD Removal Efficiency by Air Cathode Microbial Fuel Cell Using Shewanella baltica 20
by Subhashis Das and Rajnish Kaur Calay
Energies 2022, 15(11), 4152; https://doi.org/10.3390/en15114152 - 5 Jun 2022
Cited by 22 | Viewed by 3704
Abstract
Microbial fuel cells (MFCs) are a kind of bioreactor for generating electricity, facilitated by exoelectrogens while treating wastewater. The present article focuses on the performance of an air cathode plexiglass MFC in terms of chemical oxygen demand (COD) removal efficiency and power output [...] Read more.
Microbial fuel cells (MFCs) are a kind of bioreactor for generating electricity, facilitated by exoelectrogens while treating wastewater. The present article focuses on the performance of an air cathode plexiglass MFC in terms of chemical oxygen demand (COD) removal efficiency and power output by performing two sets of experiments. The proton exchange membrane and electrode materials were Nafion 117 and carbon felts, whereas, for stable biofilm formation on the anode surface, a pure culture of Shewanella baltica 20 was used. Firstly, sterile Luria-Bertani (LB) media containing lactate, ranging from 20 to 100 mM, was continuously fed to an MFC, and a maximum power density of 55 mW/m2 was observed. Similarly, artificial wastewater with COD ranging from 3250 mg/L to 10,272 mg/L was supplied to the MFC in the second set of experiments. In this case, the maximum power density and COD removal efficiency were 12 mW/m2 and 57%, respectively. In both cases, the hydraulic retention time (HRT) was 1.5 h. It was found that electricity generation depends on the characteristics of the wastewater. These initial findings confirm that the design aspects of an MFC, i.e., surface area to volume ratio, and external resistance with respect to the quality of influent need to be optimised to improve the MFC’s performance. Full article
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20 pages, 4235 KiB  
Article
Genomic Insights into Omega-3 Polyunsaturated Fatty Acid Producing Shewanella sp. N2AIL from Fish Gut
by Anchal Chaudhary, Omkar Avinash Ketkar, Sayed Irfan, Varnika Rana, Praveen Rahi, Rupesh Deshmukh, Jagdeep Kaur and Hena Dhar
Biology 2022, 11(5), 632; https://doi.org/10.3390/biology11050632 - 21 Apr 2022
Cited by 5 | Viewed by 3419
Abstract
The genus Shewanella is widely distributed in niches ranging from an aquatic environment to spoiled fish and is loaded with various ecologically and commercially important metabolites. Bacterial species under this genus find application in bioelectricity generation and bioremediation due to their capability to [...] Read more.
The genus Shewanella is widely distributed in niches ranging from an aquatic environment to spoiled fish and is loaded with various ecologically and commercially important metabolites. Bacterial species under this genus find application in bioelectricity generation and bioremediation due to their capability to use pollutants as the terminal electron acceptor and could produce health-beneficial omega-3 fatty acids, particularly eicosapentaenoic acid (EPA). Here, the genome sequence of an EPA-producing bacterium, Shewanella sp. N2AIL, isolated from the gastrointestinal tract of Tilapia fish, is reported. The genome size of the strain was 4.8 Mb with a GC content of 46.3% containing 4385 protein-coding genes. Taxonogenomic analysis assigned this strain to the genus Shewanella on the basis of average nucleotide identity (ANI) and in silico DNA-DNA hybridization (DDH), phylogenetically most closely related with S. baltica NCTC 10735T. The comparative genome analysis with the type strain of S. baltica revealed 693 unique genes in the strain N2AIL, highlighting the variation at the strain level. The genes associated with stress adaptation, secondary metabolite production, antibiotic resistance, and metal reduction were identified in the genome suggesting the potential of the bacterium to be explored as an industrially important strain. PUFA synthase gene cluster of size ~20.5 kb comprising all the essential domains for EPA biosynthesis arranged in five ORFs was also identified in the strain N2AIL. The study provides genomic insights into the diverse genes of Shewanella sp. N2AIL, which is particularly involved in adaptation strategies and prospecting secondary metabolite potential, specifically the biosynthesis of omega-3 polyunsaturated fatty acids. Full article
(This article belongs to the Section Genetics and Genomics)
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15 pages, 1715 KiB  
Article
Effects of Modified Atmosphere Packaging with Various CO2 Concentrations on the Bacterial Community and Shelf-Life of Smoked Chicken Legs
by Qiang Wang, Qian Chen, Jianhang Xu, Fangda Sun, Haotian Liu and Baohua Kong
Foods 2022, 11(4), 559; https://doi.org/10.3390/foods11040559 - 16 Feb 2022
Cited by 24 | Viewed by 3209
Abstract
The effects of modified atmosphere packaging (MAP) with various CO2 concentrations on the bacterial community and shelf-life of smoked chicken legs during 25 d of storage at 4 °C were evaluated herein. Four treatments were stored in pallets (PAL) and MAP under [...] Read more.
The effects of modified atmosphere packaging (MAP) with various CO2 concentrations on the bacterial community and shelf-life of smoked chicken legs during 25 d of storage at 4 °C were evaluated herein. Four treatments were stored in pallets (PAL) and MAP under 20% (M20), 60% (M60), and 100% (M100) CO2, respectively. The results indicated that the MAP treatments provided the legs with higher redness and hardness and lower yellowness, luminance, and lipid oxidation, compared with the PAL treatment. In addition, the MAP treatments effectively inhibited the growth of viable bacteria, delayed bacterial spoilage, and extended the shelf-life of the samples. The M60 and M100 treatments had a better inhibition effect on bacteria. In terms of bacterial community, Carnobacterium, Pseudomonas, Brochothrix, and Lactococcus were the most predominant genera in the 25 d-stored MAP samples, with Carnobacterium maltaromaticum, Pseudomonas fragi, Shewanella baltica, and Lactococcus piscium being the dominant species. However, while the inhibition effects of the M60 and M100 treatments on the bacterial community at Day 25 were similar, the outer package of the M100 treatment collapsed. Overall, the M60 treatment may be a promising approach to improving the quality and extending the shelf-life of smoked chicken legs. Full article
(This article belongs to the Section Food Microbiology)
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29 pages, 3688 KiB  
Article
Three Microbial Musketeers of the Seas: Shewanella baltica, Aliivibrio fischeri and Vibrio harveyi, and Their Adaptation to Different Salinity Probed by a Proteomic Approach
by Anna Kloska, Grzegorz M. Cech, Dariusz Nowicki, Monika Maciąg-Dorszyńska, Aleksandra E. Bogucka, Stephanie Markert, Dörte Becher, Katarzyna Potrykus, Paulina Czaplewska and Agnieszka Szalewska-Pałasz
Int. J. Mol. Sci. 2022, 23(2), 619; https://doi.org/10.3390/ijms23020619 - 6 Jan 2022
Cited by 6 | Viewed by 3394
Abstract
Osmotic changes are common challenges for marine microorganisms. Bacteria have developed numerous ways of dealing with this stress, including reprogramming of global cellular processes. However, specific molecular adaptation mechanisms to osmotic stress have mainly been investigated in terrestrial model bacteria. In this work, [...] Read more.
Osmotic changes are common challenges for marine microorganisms. Bacteria have developed numerous ways of dealing with this stress, including reprogramming of global cellular processes. However, specific molecular adaptation mechanisms to osmotic stress have mainly been investigated in terrestrial model bacteria. In this work, we aimed to elucidate the basis of adjustment to prolonged salinity challenges at the proteome level in marine bacteria. The objects of our studies were three representatives of bacteria inhabiting various marine environments, Shewanella baltica, Vibrio harveyi and Aliivibrio fischeri. The proteomic studies were performed with bacteria cultivated in increased and decreased salinity, followed by proteolytic digestion of samples which were then subjected to liquid chromatography with tandem mass spectrometry analysis. We show that bacteria adjust at all levels of their biological processes, from DNA topology through gene expression regulation and proteasome assembly, to transport and cellular metabolism. The finding that many similar adaptation strategies were observed for both low- and high-salinity conditions is particularly striking. The results show that adaptation to salinity challenge involves the accumulation of DNA-binding proteins and increased polyamine uptake. We hypothesize that their function is to coat and protect the nucleoid to counteract adverse changes in DNA topology due to ionic shifts. Full article
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11 pages, 855 KiB  
Article
Primary Processing and Storage Affect the Dominant Microbiota of Fresh and Chill-Stored Sea Bass Products
by Faidra Syropoulou, Foteini F. Parlapani, Stefanos Kakasis, George-John E. Nychas and Ioannis S. Boziaris
Foods 2021, 10(3), 671; https://doi.org/10.3390/foods10030671 - 22 Mar 2021
Cited by 18 | Viewed by 3293
Abstract
The cultivable microbiota isolated from three sea bass products (whole, gutted, and filleted fish from the same batch) during chilled storage and the effect of primary processing on microbial communities in gutted and filleted fish were studied. Microbiological and sensory changes were also [...] Read more.
The cultivable microbiota isolated from three sea bass products (whole, gutted, and filleted fish from the same batch) during chilled storage and the effect of primary processing on microbial communities in gutted and filleted fish were studied. Microbiological and sensory changes were also monitored. A total of 200 colonies were collected from TSA plates at the beginning and the end of fish shelf-life, differentiated by High Resolution Sequencing (HRM) and identified by sequencing analysis of the V3–V4 region of the 16S rRNA gene. Pseudomonas spp. followed by potential pathogenic bacteria were initially found, while Pseudomonasgessardii followed by other Pseudomonas or Shewanella species dominated at the end of fish shelf-life. P. gessardii was the most dominant phylotype in the whole sea bass, P. gessardii and S. baltica in gutted fish, while P. gessardii and P. fluorescens were the most dominant bacteria in sea bass fillets. To conclude, primary processing and storage affect microbial communities of gutted and filleted fish compared to the whole fish. HRM analysis can easily differentiate bacteria isolated from fish products and reveal the contamination due to handling and/or processing, and so help stakeholders to immediately tackle problems related with microbial quality or safety of fish. Full article
(This article belongs to the Section Food Quality and Safety)
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22 pages, 3219 KiB  
Article
Adaptation of the Marine Bacterium Shewanella baltica to Low Temperature Stress
by Anna Kloska, Grzegorz M. Cech, Marta Sadowska, Klaudyna Krause, Agnieszka Szalewska-Pałasz and Paweł Olszewski
Int. J. Mol. Sci. 2020, 21(12), 4338; https://doi.org/10.3390/ijms21124338 - 18 Jun 2020
Cited by 30 | Viewed by 6032
Abstract
Marine bacteria display significant versatility in adaptation to variations in the environment and stress conditions, including temperature shifts. Shewanella baltica plays a major role in denitrification and bioremediation in the marine environment, but is also identified to be responsible for spoilage of ice-stored [...] Read more.
Marine bacteria display significant versatility in adaptation to variations in the environment and stress conditions, including temperature shifts. Shewanella baltica plays a major role in denitrification and bioremediation in the marine environment, but is also identified to be responsible for spoilage of ice-stored seafood. We aimed to characterize transcriptional response of S. baltica to cold stress in order to achieve a better insight into mechanisms governing its adaptation. We exposed bacterial cells to 8 °C for 90 and 180 min, and assessed changes in the bacterial transcriptome with RNA sequencing validated with the RT-qPCR method. We found that S. baltica general response to cold stress is associated with massive downregulation of gene expression, which covered about 70% of differentially expressed genes. Enrichment analysis revealed upregulation of only few pathways, including aminoacyl-tRNA biosynthesis, sulfur metabolism and the flagellar assembly process. Downregulation was observed for fatty acid degradation, amino acid metabolism and a bacterial secretion system. We found that the entire type II secretion system was transcriptionally shut down at low temperatures. We also observed transcriptional reprogramming through the induction of RpoE and repression of RpoD sigma factors to mediate the cold stress response. Our study revealed how diverse and complex the cold stress response in S. baltica is. Full article
(This article belongs to the Section Molecular Microbiology)
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