Search Results (33)

Over the past decade, increasing attention has been given to the impacts of anthropogenic microparticle (AM) pollution on marine ecosystems. This study investigates AM ingestion in three commercially important fish species—Sparus aurata Linnaeus, 1758, Dicentrarchus labrax Linnaeus, 1758, and Boops boops Linnaeus, 1758—collected from both wild and farmed populations in Greek marine and lagoon environments. A total of 60 specimens were sampled from the Messolonghi Lagoon, Rhodes Island, and the Cyclades. AM were detected in 61.7% of the individuals analyzed. The mean number of ingested items per individual was 1.1 ± 1.2 in B. boops, 1.0 ± 1.7 in wild and 2.3 ± 2.1 in farmed S. aurata, and 2.5 ± 3.1 in wild and 3.6 ± 2.2 in farmed D. labrax. Ingestion ranged from 0 to 9 items per fish. No significant correlations were found between fish size and either the number or the size of ingested AM in any species. The ingested AM were primarily classified as fibers and fragments, displaying variability in size and color. Black was the dominant color across all species, followed by red and blue, while yellow was rarely observed. A statistically significant difference in the mean size of AM was recorded between wild and farmed D. labrax, whereas no such difference was observed for S. aurata. Overall, these findings provide new evidence on AM contamination in seafood species and highlight their occurrence in both natural and aquaculture environments of the eastern Mediterranean. Full article

Evaluation of semen quality is crucial for predicting fertility success in artificial insemination and eventual rooster selection within poultry breeding programs. However, the multitude of parameters obtained in semen quality analysis makes it challenging for breeders to make informed selection decisions. This study evaluated semen samples from 210 roosters in seven chicken breeds, using a computer-aided sperm analysis (CASA) system. A multivariate approach utilizing factor analysis (FA) was applied to simplify the data. The FA condensed 14 semen quality traits into 3 factors, linearity factor, velocity factor, and quantitative factor, explaining 75.82% of the original variations. The Beijing-You breed was selected to analyze the association between fertility and these semen quality factors, and we found high correlation between fertility and quantitative (r = 0.84) and linearity (r = 0.63) factors, and low correlation with the velocity factor (r = 0.19). Based on individual factor scores, breed clustering revealed distinct profiles with Houdan, Tibetan, and White Leghorn demonstrating lower sperm counts and poor linearity. Columbian Plymouth Rock exhibited high speed with poor linearity while Beijing-You, Rhode Island Red, and Barred Plymouth Rock displayed higher sperm counts with compromised speed and linearity. This study demonstrates that FA effectively consolidates multiple semen quality traits into fewer, biologically relevant factors. These findings provide valuable insights into breed-specific reproductive characteristics and offer actionable information for optimizing breeding in poultry production. Full article

Mortality from Marek’s disease virus (MDV) infection results in economic loss for the poultry industry. It is controlled by vaccination, but the virus mutates and becomes more virulent. Variation within the MHC is well known to impact the outcomes following MDV infection from research performed utilizing the White Leghorn breed, with laboratory strains of the virus. The effect of the MHC haplotype following MDV challenge was determined from six lines of commercial elite (White Plymouth Rock (two), White Leghorn (three), and Rhode Island Red (one)) egg layer lines, challenged with vv+ virus. Mortality was recorded as sire daughter averages at 16–18 weeks of age from 19 generations of data. Sires were genotyped using a set of MHC-specific SNPs, encompassing 210,000 bp. Across all lines, there was a total of 23 unique MHC haplotypes, of which 15 were found at a frequency greater than 5% and used for further analysis. A significant impact on mortality was found for 16 of the haplotypes, with 9 haplotypes associated with decreased mortality and 7 haplotypes with increased mortality. There were three haplotypes identified in more than one line, allowing cross-line comparisons. The effect of these common haplotypes was consistent (either negative, positive or neutral) between lines. Full article

The potential of black soldier fly larvae (BSFL) and microalgae (MA) in poultry diets has garnered increasing interest due to their high nutritional value and reduced environmental footprint. BSFL represent a sustainable alternative to conventional protein sources such as soybean meal, whereas MA contributes to improved egg quality, particularly through its enrichment with polyunsaturated fatty acids. This study assessed the effects of BSFL and MA inclusion on the growth performance and egg quality of Rhode Island Red (RIR) laying hens. Three diets were formulated: Diet A (10% BSFL), Diet B (10% BSFL + 2% MA), and Diet C (commercial control). The diets were formulated to meet the age-specific nutrient requirements of RIR hens, according to the National Research Council (NRC, 1994) guidelines. A total of 96 four-week-old chicks were randomly allocated to six pens (n = 16 per pen) and provided ad libitum access to feed and water throughout the trial. The results demonstrated that the inclusion of BSFL and MA significantly influenced the growth rate, onset of lay, and egg characteristics. Hens fed Diet B exhibited the highest average weekly body weight gain (0.034 ± 0.001 kg/week); initiated laying at 20 weeks of age, three weeks earlier than hens on Diets B and C; and produced significantly heavier eggs (51.208 ± 0.511 g). Enhanced eggshell quality and yolk pigmentation were also observed. In addition, Diet B enhanced the nutritional profile of the eggs, yielding a higher albumen protein content (76.546 ± 1.382%DM) and lower lipid concentrations (0.451 ± 0.128%DM). These findings underscore the potential of BSFL and MA as functional feed ingredients for improving poultry performance and egg quality in a sustainable production system. Full article

The aim of this study was to evaluate the effect of the origin of hens of locally adapted breeds on the levels of selected stress indicators and neurotransmitter serotonin in blood, and also on the selected behaviour and plumage condition. A total of 168 one-day-old chicks of the hens Leghorn H-22, Sussex S-66 and Rhode Island Red R-11 were allocated to three experimental groups, respectively: 1, 2 and 3. The birds were reared on litter until 64 weeks of age. Bird mortality was monitored during the experiment, the duration of tonic immobility (TI) was measured and blood was collected and the following were determined: heterophil-to-lymphocyte ratio (H:L), levels of corticosterone, adrenaline, noradrenaline and serotonin. Behavioural observations were also made and the plumage condition of the hens was also assessed. The hen strains studied showed different levels of fear and stress during rearing, as reflected in the behavioural test carried out and the blood levels of basal corticosterone, noradrenaline and the H:L ratio. It was also shown that changes in the birds’ fear and stress response strategies can occur with age. H-22 hens showed greater fear and stress at both young age and adulthood, and were characterised by poorer plumage and higher mortality during rearing. The results, therefore, suggest that strain H-22 has a greater propensity to develop stereotypes such as feather pecking compared to strains S-66 and R-11. Full article

This study aimed to evaluate the effects of paprika extract supplementation on egg storage and blood biochemical parameters in 63-week-old Rhode Island Red (RIR) and Silky Fowl (SF) hens. The hens were divided into three groups: a control group with a basal diet and two groups receiving the basal diet with paprika extract. The trial lasted 28 days, with egg quality (yolk color and albumen pH) assessed after storing eggs at 25 °C for 21 days. A total of 144 eggs were used in 42 treatments (two breeds, three diets, and seven storage periods) with three eggs examined each (four eggs were used on day 0 and five eggs on day 21). Additionally, the yolk carotenoid content, yolk color, and pH of eggs stored at 4 °C and 25 °C were compared. Results showed that yolk color fan score (YCFS) decreased with storage, and SF had a higher albumen pH than RIR, with both breeds exhibiting an increase in pH over time. HDL cholesterol (HDL-C) levels and the HDL-C to total cholesterol ratio were significantly influenced by breed, diet, and their interaction. The HDL-C level in SF was affected linearly and quadratically by diet, while no such trend was observed in RIR. The study concluded that paprika extract affects egg quality and blood lipid profiles differently in different breeds, highlighting breed-specific responses to dietary supplementation. Full article

In the Mediterranean, the bluespotted cornetfish Fistularia commersonii Rüppell, 1838, presents a minor socioeconomic impact and the assessment of any environmental impact requires more relevant data. The congeneric red cornetfish Fistularia petimba Lacepède, 1803, has expanded its distribution range within the basin but only small numbers have been reported to date. A total of 207 individuals of F. commersonii were collected between April 2021 and March 2022 from the Levantine coast of Rhodes and 92 more from various locations. Additionally, 13 individuals of Fistularia petimba were caught in March 2024 from the Aegean coasts of the island. We aim to assess the current progression of the population of the two cornetfish, the possible further exploitation of F. commersonii to boost the local fishing economy, their possible dietary overlaps and to add valuable biological and ecological data. In F. commersonii, male to female ratio (1:1.33) significantly departed from 1:1, with length–weight relationships exhibiting positive allometric growth. Six age groups were identified. The highest reproductive intensity was observed during summer. The onset of sexual maturity was estimated at 65.52 cm in total length (1.8 years). Longevity was estimated at 11.1 years with females growing larger than males. The exploitation rate (E = 0.47) indicated that the population is underexploited. The optimum and target fishing mortality were higher in comparison with the present fishing mortality (F = 0.48), indicating a potential for commercial exploitation of the species. For F. petimba, the sex ratio was 1:2.25. The species preys on crustaceans, followed by fish and molluscs. The finding of Vanderhorstia mertensi (Klausewitz, 1974) in the stomach content of both cornetfishes constitutes the second published record for Hellenic waters and the first for the Dodecanese Islands. Full article

Selection of livestock for disease resistance is challenging due to the difficulty in obtaining reliable phenotypes. Antibodies are immunological molecules that provide direct and indirect defenses against infection and link the activities of both the innate and adaptive compartments of the immune system. As a result, antibodies have been used as a trait in selection for immune defense. The goal of this study was to identify genomic regions associated with natural and induced antibodies in chickens using low-pass sequencing. Enzyme-linked immunosorbent assays were used to quantify innate (natural) antibodies binding KLH, OVA, and PHA and induced (adaptive) antibodies binding IBD, IBV, NDV, and REO. We collected plasma from four White Leghorn (WL), two White Plymouth Rock (WPR), and two Rhode Island Red (RIR) lines. Samples numbers ranged between 198 and 785 per breed. GWAS was performed within breed on data pre-adjusted for Line-Hatch-Sex effects using GCTA. A threshold of p = 10⁻⁶ was used to select genes for downstream annotation and enrichment analysis with SNPEff and Panther. Significant enrichment was found for the defense/immunity protein, immunoglobulin receptor superfamily, and the antimicrobial response protein in RIR; and the immunoglobulin receptor superfamily, defense/immunity protein, and protein modifying enzyme in WL. However, none were present in WPR, but some of the selected SNP were annotated in immune pathways. This study provides new insights regarding the genetics of the antibody response in layer chickens. Full article

Genomic prediction plays an increasingly important role in modern animal breeding, with predictive accuracy being a crucial aspect. The classical linear mixed model is gradually unable to accommodate the growing number of target traits and the increasingly intricate genetic regulatory patterns. Hence, novel approaches are necessary for future genomic prediction. In this study, we used an illumina 50K SNP chip to genotype 4190 egg-type female Rhode Island Red chickens. Machine learning (ML) and classical bioinformatics methods were integrated to fit genotypes with 10 economic traits in chickens. We evaluated the effectiveness of ML methods using Pearson correlation coefficients and the RMSE between predicted and actual phenotypic values and compared them with rrBLUP and BayesA. Our results indicated that ML algorithms exhibit significantly superior performance to rrBLUP and BayesA in predicting body weight and eggshell strength traits. Conversely, rrBLUP and BayesA demonstrated 2–58% higher predictive accuracy in predicting egg numbers. Additionally, the incorporation of suggestively significant SNPs obtained through the GWAS into the ML models resulted in an increase in the predictive accuracy of 0.1–27% across nearly all traits. These findings suggest the potential of combining classical bioinformatics methods with ML techniques to improve genomic prediction in the future. Full article

Eggshell gloss is an important characteristic for the manifestation of eggshell appearance. However, no study has yet identified potential candidate genes for eggshell gloss between high-gloss (HG) and low-gloss (LG) chickens. The aim of this study was to perform a preliminary investigation into the formation mechanism of eggshell gloss and to identify potential genes. The eggshell gloss of 300-day-old Rhode Island Red hens was measured from three aspects. Uterine tissues of the selected HG and LG (n = 5) hens were collected for RNA-seq. Blood samples were also collected for whole-genome resequencing (WGRS). RNA-seq analysis showed that 150 differentially expressed genes (DEGs) were identified in the uterine tissues of HG and LG hens. These DEGs were mainly enriched in the calcium signaling pathway and the neuroactive ligand–receptor interaction pathway. Importantly, these two pathways were also significantly enriched in the WGRS analysis results. Further joint analysis of WGRS and RNA-seq data revealed that 5-hydroxytryptamine receptor 1F (HTR1F), zinc finger protein 536 (ZNF536), NEDD8 ubiquitin-like modifier (NEDD8), nerve growth factor (NGF) and calmodulin 1 (CALM1) are potential candidate genes for eggshell gloss. In summary, our research provides a reference for the study of eggshell gloss and lays a foundation for improving egg glossiness in layer breeding. Full article

The aim of this study was to evaluate whether production costs can be reduced and whether the profitability of organic chicken fattening can be increased by selecting the appropriate genotypes. Rhode Island Red (K-11) and Sussex (S-66) conservative chicken genotypes, as well as modern chicken genotypes such as slow-growing Hubbard JA 957 hybrids and fast-growing Ross 308 hybrids, were selected for the study. One hundred and sixty chickens were used in the experiment (forty birds per group). The birds were fed commercial organic complete feed up to 52 days of age and organic farm-made feed (to reduce costs) between 53 and 81 days of age. Population distribution was determined using the Kolmogorov–Smirnov test. The results were analyzed statistically using one-way analysis of variance (ANOVA) with multiple comparisons and the post hoc Tukey test at a significance level of p < 0.05. The 81-day fattening period (the minimum recommended period in organic farming) led to considerable weight deficits in Rhode Island Red and S-66 chickens and excessive slaughter/trade weights in Hubbard JA 957 and Ross 308 chickens. The feed conversion ratio was high in Rhode Island Red (K-11) and Sussex (S-66) chickens at 4.19 and 4.50, respectively, and much lower in Hubbard JA 957 and Ross 308 chickens at 2.79 and 2.53, respectively. The choice of chicken genotypes had a major impact on the profitability of organic farming, and the total costs of feed and other ingredients per kg of body weight were determined at EUR 3.83 for Rhode Island Red (K-11), EUR 3.90 for Sussex (S-66), EUR 6.57 for Hubbard JA 957, and EUR 6.62 for Ross 308 genotypes. The profitability of organic farming can be increased by selecting modern, meat-type, slow-growing chicken genotypes. Full article

Ethiopia is a developing nation that could highly benefit from securing food via improved smallholder poultry farming. To support farmer and breeding decisions regarding which chicken strain to use in which Ethiopian environment, G*E analyses for body weight (BW) of growing male and female chickens were conducted. Research questions were (1) if a G*E is present for BW and (2) which strain performs best in which environment in terms of predicted BW. Analyses were performed using predicted BW at four different ages (90, 120, 150, and 180 days) of five strains (Horro, Koekoek, Kuroiler, Sasso-Rhode Island Red (S-RIR), and Sasso) tested in five Ethiopian regions (Addis Ababa, Amhara, Oromia, South Region, and Tigray) that are part of three Agro-Ecological Zones (AEZ) (cool humid, cool sub-humid, and warm semi-arid). The indigenous Horro strain was used as a control group to compare four other introduced tropically adapted strains. The dataset consisted of 999 female and 989 male farm-average BW measurements. G*E was strongly present (p < 0.001) for all combinations of strain and region analyzed. In line with previous research, Sasso was shown to have the highest predicted BW, especially at an early age, followed by Kuroiler. Horro had the lowest predicted BW at most ages and in most regions, potentially due to its young breeding program. The highest predicted BW were observed in Tigray, Oromia, and Amhara regions, which are in the main part of the cool sub-humid AEZ. Full article

Low-temperature semen storage technologies are already being used in poultry conservation programs, but the quality of reproductive material stored in cryobanks varies greatly and cannot always be successfully used for practical purposes. Therefore, it is necessary to improve the compositions of cryoprotective media to improve their quality. This study aimed to investigate the composition of membrane lipids and carbohydrates in the cytosol of rooster spermatozoa, to explain the dose-dependent effect of a combination of trehalose and fructose in cryoprotective media on the preservation of their morphological and kinetic parameters during freezing/thawing, and to determine the most effective diluent composition. Ejaculates were collected from Rhode Island Red roosters (n = 10). The effectiveness of three diluents containing trehalose was evaluated: LCM-control (0 mM), Treh20 (9.5 mM), and Treh30 (13.4 mM). Chromatographic analysis of membrane lipids, carbohydrates, and polyols of the spermatozoa cytosol was performed. A decrease in the content of glycolipids in the plasma membranes of spermatozoa from 2.0% in native spermatozoa to 1.1–1.4% (frozen/thawed) and phospholipids from 71.2% (native) to 70.5% (frozen/thawed) reduced the progressive sperm motility from 65.7% in native spermatozoa to 12.6–27.6% (frozen/thawed). The same dynamics were observed for the viability parameter of 90.4% (native) and 27.0–41.2% (frozen/thawed). The Treh20 diluent, using a combination of fructose (36 mM) and trehalose (9.5 mM) saccharides, maximally preserved the lipid profile of plasma membranes and the composition of the cytosol of frozen/thawed rooster spermatozoa, which positively affected the indicators of general and progressive mobility and viability. Full article

The aim of the study was to evaluate the effect of genotype on the productivity and egg quality of three hen strains included in the genetic resource protection program in Poland. The study encompassed populations of laying hens, i.e., Rhode Island Red/RIR (R-11 and K-22) and Rhode Island White (A-33). The analysis over five generations included the basic production traits, i.e., the weight of the birds at 20 weeks (g), egg weights at 33 and 53 weeks, sexual maturity, the number of eggs laid up to 56 weeks of age, and hatchability parameters. In addition, the effective population size (N_e) and flock homozygosity coefficient (F_x) were calculated for each breed. Population health during the rearing and production periods was also recorded. The study also determined egg content and shell quality traits in relation to the age of the hens. The birds were kept on litter at a stocking rate of 5 hens/m² and fed ad libitum with a standard feed mixture for hens. Based on the results, it was concluded that the evaluated hen populations (R-11, K-22, and A-33) are valuable strains, representing a reservoir of unique phenotypic and egg quality traits. It was shown that the random mating system used in the reproduction of flocks effectively protects the populations from an increase in the degree of inbreeding. An influence of hens’ origin (genotype) and age on the performance results, as well as egg quality traits, was found. Over five generations, the evaluated hen strains were characterized by high survival rates (above 98%). The study also found a large variation between the R-11 and K-22 strains and the A-33 strain in terms of the evaluated performance traits, especially in the body and egg weights, sexual maturity age, and laying performance of hens. The earliest to start laying were hens from the K-22 strains, which also showed significantly (p ≤ 0.05) higher laying performances compared to R-11 hens. The results also indicate that the quality of eggs from hens of the compared strains varied. This was particularly true for such traits as shell color; egg, shell, and yolk weight; and shell quality. It was also shown that many egg and shell quality traits change with the age of the hens. The analysis of the obtained data indicates that the adopted methods of conservative breeding for these populations have influenced the success of the conservation program. Full article

According to research, egg quality and lysozyme content are influenced by a number of factors, which are mostly known in the case of commercial hybrids, while in breeds included in genetic resources conservation programmes, new research results in this regard are emerging. The aim of the study was to determine the effect of egg laying time and genotype of selected Polish native breeds of hens on egg quality and lysozyme content and activity in the albumen. The study material consisted of eggs collected from four strains of laying hens included in the Polish conservation programme, i.e., Green-legged Partridge (Z-11), Yellow-legged Partridge (Ż-33), Rhode Island Red (R-11) and Leghorn (H-22). At week 56, 28 eggs were randomly collected at 7:00 and 13:00 h from each breed of hen and assessed for quality. Laying time influenced certain egg quality traits. Eggs laid by hens in the morning were characterised by 1.7 g lower total weight and albumen weight, 2.4 pores/cm² higher number of shell pores, 0.15 higher albumen pH values and 0.17 lower yolk pH values compared to those laid in the morning. The time of laying did not affect the level and activity of lysozyme in the albumen. A significant negative correlation was found between eggshell traits and albumen height, and between Haugh unit and lysozyme content and activity in the albumen. The studied egg quality traits were more influenced by genotype than by the egg-laying time. Full article