Search Results (173)

The immune response triggered when plant cell surface receptors recognize pathogen-associated molecular patterns (PAMPs) is known as PAMP-triggered immunity (PTI). Several studies have demonstrated that extracellular plant ferredoxin-like protein (PFLP) can enhance PTI signaling, thereby conferring resistance to bacterial diseases in various plants. The C-terminal casein kinase II (CK2) phosphorylation region of PFLP is essential for strengthening PTI. However, whether phosphorylation at this site directly enhances PTI signaling and consequently increases plant disease resistance remains unclear. To investigate this, site-directed mutagenesis was used to generate PFLPT90A, a non-phosphorylatable mutant, and PFLPT90D, a phospho-mimetic mutant, for functional analysis. Based on the experimental results, none of the recombinant proteins were able to enhance the hypersensitive response induced by the HrpN protein or increase resistance to the soft rot pathogen Pectobacterium carotovorum subsp. carotovorum ECC17. These findings suggest that phosphorylation at the T90 residue might be essential for PFLP-mediated enhancement of plant immune responses, implying that this post-translational modification is likely required for its disease resistance function in planta. To further explore the relationship between PFLP phosphorylation and endogenous CK2, the Arabidopsis insertion mutant cka2 and the complemented line CKA2R were analyzed under treatment with flg22_Pst from Pseudomonas syringae pv. tomato. The effects of PFLP on the hypersensitive response, rapid oxidative burst, callose deposition, and susceptibility to soft rot confirmed that CK2 is required for these immune responses. Furthermore, expression analysis of PTI-related genes FRK1 and WRKY22/29 in the mitogen-activated protein kinase (MAPK) signaling pathway demonstrated that CK2 is necessary for PFLP to enhance flg22_Pst-induced immune signaling. Taken together, these findings suggest that PFLP enhances A. thaliana resistance to bacterial soft rot primarily by promoting the MAPK signaling pathway triggered by PAMP recognition, with CK2-mediated phosphorylation being essential for its function. Full article

This review presents information obtained over the past 10 years on the methods to control the widespread worldwide phytopathogen Pectobacterium carotovorum subsp. carotovorum (Pcc). This bacterium is among the ten most dangerous phytopathogens; it affects a wide range of cultivated plants: vegetables, ornamental and medicinal crops, both during vegetation and during the storage of fruits. Symptoms of Pcc damage include the wilting of plants, blackening of vessels on leaves, stems and petioles. At the flowering stage, the stem core gradually wilts and, starting from the root, the stem breaks and the plant dies. Pcc is a rod-shaped, non-capsule and endospore-forming facultative anaerobic Gram-negative bacterium with peritrichous flagellation. Pcc synthesizes bacteriocins—carocins. The main virulence factors of Pcc are the synthesis of N-acyl-homoserine lactone (AHL) and plant cell wall-degrading enzymes (PCWDEs) (pectinases, polygalacturonases, cellulases, and proteases). Diagnostic methods for this phytopathogen include polymerase chain reaction (PCR), loop-mediated isothermal amplification (LAMP), multilocus genotyping of strain-specific genes and detection of unique volatile organic compounds (VOCs). The main methods to control this microorganism include the use of various chemicals (acids, phenols, esters, salts, gases), plant extracts (from grasses, shrubs, trees, and algae), antagonistic bacteria (Bacillus, Pseudomonas, Streptomyces, and lactic acid bacteria), viruses (including a mixture of bacteriophages), and nanomaterials based on metals and chitosan. Full article

This study evaluated the effects of a plant pathogenic bacterium Pectobacterium carotovorum strain BD163 inoculation and nutrient solution (CaCO₃ (2 mM), NaCl (1 mM) and K₂Cr₂O₇ (0.001 mM)) on the growth, photosynthesis, nutrient uptake and metabolomics of tomato seedlings. The experiment had four experimental treatments (1. solution + BD163 inoculation, 2. solution alone, 3. BD163 inoculation, 4. control). Plant growth and photosynthesis responses were minimal, and differences in nutrient assimilation and metabolite profiles were clear-cut. Of the photosynthesis parameters, only water use efficiency was impacted; it was higher in the bacterium-only treatment and unchanged in the other treatments. The quantities of boron, bismuth and nickel were affected, accumulating mostly in the “solution + BD163 inoculation” experimental set. Principal component analysis of metabolomics data separated the treatments into three groupings; group 1 was the double treatment, group 2 was the nutrient solution treatment and, finally, group 3 was the P. carotovorum and control treatments. Correlation analysis of the data showed an assumed interdependence of several plant factors. The authors concluded that the interaction between the bacterium, the plant and the nutrient solution is complex and more pronounced at the chemical and metabolite level than at the growth and photosynthesis level. Full article

Phytopathogenic fungi and bacteria pose a serious threat to global agriculture, leading to significant economic losses and potential health risks. Consequently, the search for natural alternatives to synthetic agrochemicals has garnered increasing scientific attention, with plant extracts emerging as promising environmentally friendly solutions. In this context, the surface extract of Salvia discolor, obtained using dichloromethane, was analyzed for its bioactive potential. Chemical profiling revealed a rich composition of terpenoids and flavonoids. The antimicrobial potential of the ground extract was evaluated against nine phytopathogenic fungi (Alternaria solani, Botrytis cinerea, Colletotrichum lindemuthianum, Fusarium solani, Fusarium oxysporum f. sp. lactucae race 1, Phoma betae, Phaeomoniella chlamydospora, Pythium dissotocum, and Stemphylium sp.), and two phytopathogenic bacteria (Clavibacter michiganesis subsp. michiganesis and Pectobacterium carotovorum subsp. carotovorum), selected from common pathogens of agricultural interest. Complete inhibition of P. chlamydospora at 1000 µg mL⁻¹ and strong activity against P. dissotocum, F. solani and B. cinerea was observed, and low inhibition (<40%) against C. lindemuthianum and F. oxysporum f. sp. lactucae race 1. However, the extract showed promising results in the post-harvest protection of tomatoes against gray mold. Moderate antibacterial activity was seen against C. michiganensis subsp. michiganensis. These findings indicate that S. discolor extract has the potential to serve as an effective natural crop protection agent, though further optimization may be needed for broader application. Full article

It has been previously shown that a selenium (Se) nanocomposite (NC) based on the natural polysaccharide arabinogalactan (AG) produced from Siberian larch wood (Larix sibirica Ledeb.), containing 0.000625% of Se, has antibacterial properties against phytopathogens, such as Clavibacter sepedonicus, Pectobacterium carotovorum, and Phytophthora cactorum. The same concentration of Se/AG NC stimulated the growth and development of potato plants in vitro, as well as the formation of their roots, while Se did not accumulate in potato tissues after plant treatment. However, to realize the full potential of Se/AG NC in agriculture for fighting phytopathogens with the aim of developing commercial nanopreparations, additional toxicological studies are needed to fully address their effects. In this study, to assess the environmental risk of using Se/AG NCs, it was applied to a number of bacteria isolated from soil (Escherichia coli, Bacillus cereus, and B. megaterium), water (Micrococcus luteus, B. subtilis, and Sarcina flava), and activated sludge and wastewater of treatment facilities (Serratia marcescens, M. luteus, B. cereus, and Pseudomonas aeruginosa). When studying the antibacterial activity of Se/AG NC against 11 test cultures of bacteria using the agar diffusion method, it was shown that Se/AG NC had a toxic effect only at high concentrations in the range from 40 mg/mL Se/AG NC (1.68 mg/mL Se) to 0.625 mg/mL Se/AG NC (0.026 mg/mL Se) on two types of bacteria M. luteus isolated from the waters of Lake Baikal and B. cereus obtained from activated sludge of treatment facilities. The maximum diameter of the growth inhibition zone of the test cultures after exposure to different concentrations of Se/AG NC was noted for M. luteus (water) and E. coli (soil) at 40 mg/mL − 26.3 and 20.3 mm, respectively. Thus, the negative impact of Se/AG NC on bacteria from different ecological niches was registered only at high concentrations, similar to the predicted concentrations of Se/AG NC in wastewater, which demonstrates the environmental safety of Se/AG NC for use in agriculture. Full article

Enhancing the growth and productivity of ornamental and horticultural plants is a major function of plant extracts and macronutrient elements. The growth properties of Artemisia abrotanum plants were evaluated in two successive seasons as affected by the magnesium (Mg) fertilizer added to the soil in the form of magnesium sulfate at four concentrations of 0 (as a control), 4, 6, and 8 g/L as well as Tropaeolum majus aqueous leaf extract (ALE) at concentrations of 0 (as a control), 4, 6, and 8 g/L as a foliar application. The chemical components of A. abrotanum essential oils (EOs) were analyzed using the gas chromatography–mass spectrometry (GC-MS) apparatus. The studied parameters, including plant height, total fresh weight, number of branches/plant, EO percentages, chlorophyll-a content, chlorophyll-b content, and carotenoid content, were enhanced by the application of Mg or T. majus ALE or their combinations. The highest plant heights, 48.83 cm, and 48.5 cm, were observed in the plants treated with Mg (8 g/L)+T. majus ALE (8 g/L) and Mg (6 g/L)+T. majus ALE (4 g/L), in both seasons, respectively. The highest values of total fresh weight, 54.80 and 60.59 g, were recorded in plants treated with Mg (8 g/L)+T. majus ALE (4 g/L) and Mg (8 g/L)+T. majus ALE (4 g/L), in both seasons, respectively. The highest number of branches/plant, 60.33 and 73.33, were measured in plants treated with Mg (8 g/L)+T. majus LAE (8 g/L), in both seasons, respectively. The highest EO percentages, 0.477% and 0.64%, were measured in plants treated with Mg (8 g/L)+T. majus ALE (8 g/L), in both seasons, respectively. The total fresh weight in both seasons (r = 0.96), the number of branches/plant in both seasons (r = 0.97), the number of branches/plant in the first season, and the number of branches/plant in both seasons (r = 0.96), the total fresh weight in the second season and the number of branches/plant in the first season (r = 0.95) and the second season (r = 0.94), and the number of branches/plant and the carotenoids in the first season (r = 0.90) were all found to be significantly and positively correlated. The major compounds in the EOs were 7-methoxy-4-methylcoumarin (4-methylherniarin), cedrol, endo-borneol, and 7-epi-silphiperfol-5-ene. The antibacterial activity of the EOs was evaluated against the growth of Pectobacterium atrosepticum and Pectobacterium carotovorum subsp. carotovorum, which causes soft rot of potato tubers. The EOs were found to be effective against P. carotovorum subsp. carotovorum with the inhibition zones ranging from 1 to 5 mm at the concentration of 100 μg/mL, and no inhibitions were found against P. atrosepticum at the studied concentrations. The minimum inhibitory concentration against P. carotovorum subsp. carotovorum was found at 75 μg/mL. In conclusion, using the combination treatments of Mg and T. majus ALE is highly suggested to enhance the growth of A. abrotanum plants. Full article

Pectobacterium carotovorum subsp. carotovorum (Pcc) is a major phytopathogen responsible for soft rot in vegetables, affecting various staple crops such as carrots and potatoes. However, the recent emergence of streptomycin-resistant strains of Pcc has compromised the effectiveness of streptomycin for treating disease in agriculture. This study aimed to evaluate the effects of the phenolic compounds carvacrol, streptomycin, and a combination of both on the antibacterial activity, cell membrane integrity, and virulence factors of a streptomycin-resistant strain of Pcc (SP). The results revealed that the minimum inhibitory concentrations (MIC) of carvacrol and streptomycin against the SP strain were 200 μL/L and 50 g/L, respectively. In particular, their combined application had an additive effect on SP (fractional inhibitory concentration index, FICI = 0.625), leading to 2-fold and 8-fold reductions in the concentrations of the combined use of carvacrol and streptomycin, respectively, compared to when used alone. Follow-up control tests using detached Chinese cabbage, potato, and carrot samples showed that the combined treatment significantly alleviates the severity of soft rot disease and inhibits the relative conductivity, motility, and extracellular hydrolase secretion of SP. The scanning electron microscopy and confocal laser scanning microscopy observations further confirmed the disruption of SP’s cell membrane permeability and cell wall integrity after treatment with both carvacrol and streptomycin. Additionally, the transcriptome analysis indicated that their combined use enhanced the suppression of SP by regulating genes associated with its membrane integrity, virulence factors, and resistance mechanisms. In conclusion, applying the phenol–antibiotic combination of carvacrol and streptomycin significantly reduces the streptomycin dose needed against SP and can effectively control soft rot in vegetables prone to it, offering a potential management strategy for controlling SP-induced soft rot during postharvest storage. Full article

Kiwifruit canker disease, caused by different bacterial pathogens, was observed in Sichuan Province, China. Specifically, in the winter and spring seasons, Pseudomonas syringae pv. actinidiae (Psa) was identified as the primary pathogen, causing reddish-brown exudates, branch dieback, and phloem decay. In contrast, during the summer months, Pectobacterium carotovorum subsp. actinidiae (Pca) emerged as the primary causal agent of kiwifruit canker, exhibiting similar symptoms to those caused by Psa, such as exudates from leaf scars and lenticels, xylem necrosis, and branch desiccation. From 55 symptomatic samples, 34 bacterial isolates were obtained, with 28 identified as Psa and 6 as Pca. Pathogenicity tests revealed significant variation in virulence, with Psa isolate G5 and Pca isolate M5 showing the highest pathogenicity on leaves and branches, respectively. Both pathogens caused characteristic necrosis and lesion expansion, fulfilling Koch’s postulates. Phylogenetic analyses confirmed the distinct evolutionary relationships of Psa and Pca isolates. These findings highlight the seasonal variability of kiwifruit canker pathogens and emphasize the need for targeted disease management strategies. Full article

In view of a constant growth in the human population on Earth, the provision of a necessary amount of high-quality food looks challenging. As over 10% of the crop yields are annually lost due to the presence of phytopathogens, the development of novel, eco-friendly methods of pest eradication might contribute to avoiding nutritional shortages. Here, we propose a controlled application of cold atmospheric pressure plasma (CAPP) generated in the form of an atmospheric pressure plasma jet (APPJ), for which we conducted multivariate optimization of the working parameters with the use of the design of experiments (DoE) in addition to the response surface methodology (RSM). After estimating the optimal operating conditions of APPJ, we determined the inactivation rates caused by 2 min CAPP exposure towards bacterial phytopathogens from three species Dickeya solani, Pectobacterium atrosepticum and Pectobacterium carotovorum artificially inoculated on the surface of plant seeds from four species. Logarithmic reductions, as a key result of this work, were enclosed in the range of 1.61–4.95 in the case of Cucumis sativus, Pisum sativum, and Vigna radiata, while for the bacteria-inoculated Zea mays seeds, lower antibacterial properties of APPJ equaling 0.86–1.12 logs were noted. The herein applied exposure to APPJ did not reveal any statistically significant detrimental effects on the germination of plant seeds, seed coat integrity, or early plant growth. Even plant growth promotion by 20.96% was observed for the APPJ-exposed Zea mays seeds. By applying colorimetric assays and optical emission spectrometry (OES), we determined the oxidative potential in addition to identifying the reactive oxygen species (ROS) ^•OH, ^•HO₂, ^•O₂⁻, O₃, and ¹O₂ and the reactive nitrogen species (RNS) N, NO₂, and NO₃ responsible for the antibacterial properties of APPJ. In summary, universal antiphytopathogenic properties of the APPJ treatment reached due to proper optimization of the working conditions were revealed against three bacterial strains from the family Pectobacteriaceae inoculated on the seeds from diverse plant species. The data presented herein may contribute to future development of the plasma agriculture field and provide alternatives to pesticides or the prevention-based control methods towards plant pathogenic bacteria. Full article

In this study, two compounds have been isolated from the Arctic-derived fungus Penicillium chrysogenum INA 13460. Structural elucidation, performed using 2D NMR and HR-ESIMS data, has identified the compounds as stereoisomers of secalonic acids, dimeric tetrahydroxanthones. The absolute configurations of these stereoisomers have been determined through conformational NMR analysis and circular dichroism spectroscopy. The antimicrobial activity of secalonic acids D and F has been evaluated against a diverse range of microorganisms, including Gram-positive multidrug-resistant Staphylococcus aureus, Gram-negative Escherichia coli ATCC 25922, Pseudomonas aeruginosa ATCC 27853, the phytopathogen Pectobacterium carotovorum VKM-B1247, and the fungi Fusarium oxysporum VKPM F 890, Aspergillus fumigatus VKM F-37, and A. niger ATCC 16404. Genomic and chemical analyses further support P. chrysogenum INA 13460 as a promising natural source for antimicrobial drug discovery and biological control applications. Full article

For plant diseases to become established, plant pathogens require not only virulence factors and susceptible hosts, but also optimal environmental conditions. The accumulation of high soil salinity can have serious impacts on agro-biological ecosystems. However, the interactions between plant pathogens and salinity have not been fully characterized. This study investigated the effects of salt stress on representative plant pathogens, such as Burkholderia gladioli, Burkholderia glumae, Pectobacterium carotovorum subsp. carotovorum (Pcc), Ralstonia solanacearum, and Xanthomonas oryzae pv. oryzae. Phenotypic assays revealed that B. gladioli and R. solanacearum are highly sensitive to salt stress, exhibiting significant reductions in growth, motility, and enzyme production, whereas Pcc showed notable tolerance. Pan-genome-based comparative transcriptomics identified co-downregulated patterns in B. gladioli and R. solanacearum under stress conditions, indicating the suppression of bacterial chemotaxis and type III secretion systems. Uniquely upregulated patterns in Pcc were associated with enhanced survival under high salinity, such as protein quality control, osmotic equilibrium, and iron acquisition. Additionally, the application of salt stress combined with the beneficial bacterium Chryseobacterium salivictor significantly reduced tomato wilt caused by R. solanacearum, suggesting a potential management strategy. This study underscores practical implications for effectively understanding and controlling plant pathogens under future climate changes involving salt stress. Full article

The effect of chemically synthesized nanocomposites (NCs) of selenium (Se/AG NC), copper oxide (Cu/AG NC) and manganese hydroxide (Mn/AG NC), based on the natural polymer arabinogalactan (AG), on the processes of growth, development and colonization of potato plants in vitro was studied upon infection with the causative agent of potato blackleg—the Gram-negative bacterium Pectobacterium carotovorum—and the causative agent of ring rot—the Gram-positive bacterium Clavibacter sepedonicus (Cms). It was shown that the infection of potatoes with P. carotovorum reduced the root formation of plants and the concentration of pigments in leaf tissues. The treatment of plants with Cu/AG NC before infection with P. carotovorum stimulated leaf formation and increased the concentration of pigments in them. A similar effect was observed when potatoes were exposed to Mn/AG NC, and an increase in growth and root formation was also observed. The infection of plants with Cms inhibited plant growth. Treatment with each of the NCs mitigated this negative effect of the phytopathogen. At the same time, Se/AG and Mn/AG NCs promoted leaf formation. The Se/AG NC increased the biomass of Cms-infected plants. The treatment of plants with NCs before infection showed a decrease in the intensity of the colonization of plants by bacteria. The Se/AG NC had the maximum effect, which is probably due to its high antioxidant capacity. Thus, the NCs are able to mitigate the negative effects of bacterial phytopathogens on vegetation and the intensity of colonization by these bacteria during the infection of cultivated plants. Full article

Bacterial soft rot causes major crop losses annually and can be caused by several species from multiple genera. These bacteria have a broad host range and often infect produce through contact with soil. The main genera causing bacterial soft rot are Pectobacterium and Dickeya, both of which have widespread geographical distribution. Because of many recent renaming and reclassifications of bacteria causing soft rot, identification and characterization of the causative agents can be challenging. In this work, we surveyed commercially available produce exhibiting typical soft rot symptoms, isolating pectinolytic bacteria and characterizing them genetically and phenotypically. We found that in our sampling, many samples were from the genus Pectobacterium; however, other genera were also capable of eliciting symptoms in potatoes, including an isolate from the genus Chryseobacterium. Genomic analyses revealed that many of the Pectobacterium isolates collected share prophages not found in other soft rot species, suggesting a potential role for these prophages in the evolution or fitness of these isolates. Our Chryseobacterium isolate was most similar to C. scophthalmum, a fish pathogen, suggesting that this isolate may be a crossover pathogen. Full article

The dispersal of plant pathogens is a threat to the global economy and food industry which necessitates the need to discover efficient biocontrol agents such as bacteria, fungi, etc., inhibiting them. Here, we describe the Bacillus mycoides strain b12.3 isolated from the soil of Olkhon Island in Lake Baikal, Russia. By applying the co-cultivation technique, we found that the strain inhibits the growth of plant pathogens, such as the bacteria Xanthomonas campestris, Clavibacter michiganensis, and Pectobacterium atrospecticum, as well as the fungus Alternaria solani. To elucidate the genomic fundament explaining these activities, we leveraged next-generation whole-genome sequencing and obtained a high-quality assembly based on short reads. The isolate bore seven known BGCs (biosynthetic gene clusters), including those responsible for producing bacillibactin, fengycin, and petrobactin. Moreover, the genome contained insecticidal genes encoding for App4Aa1, Tpp78Ba1, and Spp1Aa1 toxins, thus implicating possible pesticidal potential. We compared the genome with the 50 closest assemblies and found that b12.3 is enriched with BGCs. The genomic analysis also revealed that genomic architecture corresponds to the experimentally observed activity spectrum implying that the combination of produced secondary metabolites delineates the range of inhibited phytopathogens Therefore, this study deepens our knowledge of the biology and ecology of B. mycoides residing in the Lake Baikal region. Full article

This study explores the biocontrol potential of Pediococcus sp. M21F004, a lactic acid bacteria (LAB) isolated from marine environments, against several bacterial and fungal phytopathogens. Out of 50 marine bacterial isolates, Pediococcus sp. M21F004 was selected for its exceptional antimicrobial activity. The strain, isolated from the intestine of a starry flounder, was identified as Pediococcus sp. Gas chromatography–mass spectrometry (GC-MS) analysis revealed that oleic acid (OA) is a key antimicrobial compound produced by Pediococcus sp. M21F004. In vitro assays showed that the culture broth (CB) of Pediococcus sp. M21F004, as well as OA, exhibited significant inhibitory effects against pathogens such as Fusarium oxysporum, Clarireedia homoeocarpa, and Pectobacterium carotovorum subsp. carotovorum. In vivo tests on cucumber Fusarium wilt, creeping bentgrass dollar spot, tomato bacterial wilt, and kimchi cabbage soft rot further demonstrated the strain’s efficacy in reducing disease severity. Moreover, OA had the highest control value of 74% against tomato bacterial wilt, followed by 64.1% against cucumber fusarium wilt, 42.5% against kimchi cabbage soft rot, and 16.5% against creeping bentgrass dollar spot. These findings suggest that Pediococcus sp. M21F004 and its metabolite OA offer promising alternatives to chemical pesticides, contributing to sustainable plant disease management by promoting resistance induction and providing an eco-friendly approach to agriculture. Full article