Skip to Content
You are currently on the new version of our website. Access the old version .

30 Results Found

  • Article
  • Open Access
3 Citations
1,414 Views
20 Pages

22 October 2025

Background: Land use change fundamentally alters soil microbial communities and biochemical processes, yet the integrated effects on rhizosphere microbiome–metabolome networks remained poorly understood. Objective: This study investigated land...

(This article belongs to the Special Issue Advanced Metabolic Profiling via Gas Chromatography–Mass Spectrometry and Liquid Chromatography–Mass Spectrometry)
  • Article
  • Open Access
17 Citations
5,887 Views
14 Pages

Soil Microbial Community Based on PLFA Profiles in an Age Sequence of Pomegranate Plantation in the Middle Yellow River Floodplain

  • Shilin Wang,
  • Xinyu Yan,
  • Dong Wang,
  • Imran Ahammad Siddique and ,
  • Ji Chen,
  • Qi Xu,
  • Cancan Zhao,
  • Leyun Yang,
  • Yuan Miao and
  • Shijie Han
  • + 5 authors+ 0 author

27 August 2021

Pomegranate (Punica granatum L.) is one of the most important fruit trees in semi-arid land. Previous studies were primarily focused on soil microbial community composition under different pomegranate plantation managements. However, soil microbial c...

(This article belongs to the Section Microbial Diversity and Culture Collections)
  • Article
  • Open Access
9 Citations
2,283 Views
19 Pages

31 May 2023

We aimed to explore how the invasion of the alien plant Solanum elaeagnifolium affects soil microbial and nematode communities in Mediterranean pines (Pinus brutia) and maquis (Quercus coccifera). In each habitat, we studied soil communities fro...

(This article belongs to the Special Issue Impact of Non-native Plant Species Invasion on the Ecosystem)
  • Article
  • Open Access
14 Citations
5,421 Views
10 Pages

Indication of Importance of Including Soil Microbial Characteristics into Biotope Valuation Method

  • Josef Trögl,
  • Jana Pavlorková,
  • Pavla Packová,
  • Josef Seják and ,
  • Pavel Kuráň,
  • Jan Popelka and
  • Jan Pacina
  • + 2 authors+ 0 author

Soil is a key part of a biotope and microorganisms are dominant components contributing to soil functions. Conversely, established methods for valuation of biotopes according to Natura 2000 rely predominantly on the communities living on the surface....

(This article belongs to the Section Environmental Sustainability and Applications)
  • Article
  • Open Access
4 Citations
2,763 Views
16 Pages

An elevated CO2 (eCO2) fumigation experiment was carried out to study the influence of various CO2 concentrations on microorganisms involved in the incorporation of root-derived C in greenhouse soil systems. In this study, 400 and 800 µmol·mol−1 CO2...

(This article belongs to the Section Environmental Microbiology)
  • Article
  • Open Access
314 Views
20 Pages

Soil C:N Stoichiometry and pH Are Associated with PLFA-Based Microbial Community Structure Across Forest Types

  • Mengjun Hu,
  • Mingxing Zhong,
  • Dong Wang,
  • Bin Hu and ,
  • Tengxu Zhang and
  • Zhenxing Zhou
  • + 1 author+ 0 author

23 September 2026

Forest types are associated with differences in soil properties and microbial communities, but the environmental correlates of microbial variation across soil depths remain poorly resolved. We examined whether PLFA-derived microbial community structu...

(This article belongs to the Section Forest Soil)
  • Article
  • Open Access
5 Citations
2,502 Views
21 Pages

Organ-Specific Responses to Chronic High-Fat Diets in Mice: Insights into Phospholipid Fatty Acid Distribution

  • Aleksandra Nenadovic,
  • Sanjin Kovacevic,
  • Anica Stankovic,
  • Tamara Popovic and ,
  • Jasmina Debeljak Martacic,
  • Slavica Rankovic,
  • Silvio R. De Luka,
  • Jelena Milasin and
  • Jelena Nesovic Ostojic
  • + 4 authors+ 0 author

27 February 2025

Background/Objectives: This research aimed to investigate phospholipid fatty acid (PLFA) distribution in the brain, kidneys, and white adipose tissue (WAT) and lipid profiles in response to high-fat diets. Methods: Adult female C57BL/6 mice were fed...

(This article belongs to the Section Lipids)
  • Article
  • Open Access
3 Citations
3,527 Views
12 Pages

22 December 2020

Biogeographic separation has been an important cause of faunal and floral distribution; however, little is known about the differences in soil microbial communities across islands. In this study, we determined the structure of soil microbial communit...

(This article belongs to the Special Issue Restoring Forest Landscapes: Impact on Soil Properties and Functions)
  • Article
  • Open Access
562 Views
15 Pages

Litter decomposition regulates the quantity and quality of plant-derived carbon (C) and nitrogen (N) inputs to soil and is closely associated with microbial community structure. However, how elevated ozone (O3) and nitrogen (N) addition interactively...

(This article belongs to the Special Issue The Impact of Carbon and Nitrogen Cycles on Agricultural Soil Ecology)
  • Article
  • Open Access
7 Citations
8,281 Views
16 Pages

6 March 2012

Supercritical fluid extraction (SFE) was used in the analysis of bacterial respiratory quinone (RQ), bacterial phospholipid fatty acid (PLFA), and archaeal phospholipid ether lipid (PLEL) from anaerobically digested sludge. Bacterial RQ were determin...

(This article belongs to the Section Green Chemistry)
  • Article
  • Open Access
26 Citations
6,595 Views
20 Pages

Plasma Phospholipid Fatty Acids and Coronary Heart Disease Risk: A Matched Case-Control Study within the Women’s Health Initiative Observational Study

  • Qing Liu,
  • Nirupa R. Matthan,
  • JoAnn E. Manson,
  • Barbara V. Howard and ,
  • Lesley F. Tinker,
  • Marian L. Neuhouser,
  • Linda V. Van Horn,
  • Jacques E. Rossouw,
  • Matthew A. Allison and
  • Charles B. Eaton
  • + 10 authors+ 5 authors

21 July 2019

Background and Aims: The association of fatty acids with coronary heart disease (CHD) has been examined, mainly through dietary measurements, and has generated inconsistent results due to measurement error. Large observational studies and randomized...

(This article belongs to the Special Issue Dietary Fat and Human Health)
  • Article
  • Open Access
6 Citations
6,026 Views
13 Pages

Physical Conditions Regulate the Fungal to Bacterial Ratios of a Tropical Suspended Soil

  • Julian Donald,
  • Sam Bonnett,
  • Michael Cutler,
  • Noreen Majalap and ,
  • Pete Maxfield and
  • M. D. Farnon Ellwood
  • + 1 author+ 0 author

2 December 2017

As a source of ‘suspended soils’, epiphytes contribute large amounts of organic matter to the canopy of tropical rain forests. Microbes associated with epiphytes are responsible for much of the nutrient cycling taking place in rain forest canopies. H...

(This article belongs to the Section Forest Ecophysiology and Biology)
  • Article
  • Open Access
511 Views
17 Pages

Vertical Patterns and Responses of Soil Microbial Functional Groups to Chronic Nitrogen Addition and Their Linkages to Nutrient Dynamics in a Typical Steppe

  • Muqier Hasi,
  • Xinyi Jiang,
  • Shilin Wang,
  • Yasong Chen and ,
  • Canran Yang,
  • Jianhui Huang and
  • Guoxiang Niu
  • + 2 authors+ 0 author

Despite the pivotal importance of soil microbial communities in regulating the terrestrial carbon (C) cycle and ecosystem functioning, their vertical patterns and their responses to long-term nitrogen (N) deposition, in terms of microbial biomass and...

  • Article
  • Open Access
27 Citations
5,045 Views
14 Pages

Effect of Soil Layer and Plant–Soil Interaction on Soil Microbial Diversity and Function after Canopy Gap Disturbance

  • Xuan Yu,
  • Lin Yang,
  • Shixuan Fei,
  • Zitong Ma and ,
  • Ruqian Hao and
  • Zhong Zhao
  • + 1 author+ 0 author

29 October 2018

Gaps by thinning can have different microclimatic environments compared to surrounding areas, depending on the size of the gap. In addition, gaps can play important roles in biological dynamics, nutrient cycling, and seedling regeneration. The impact...

(This article belongs to the Section Forest Ecology and Management)
  • Article
  • Open Access
2 Citations
2,666 Views
15 Pages

Comparison of Soil Microbial Community between Managed and Natural Vegetation Restoration along a Climatic Gradient in Karst Regions

  • Zhuanzhuan Sun,
  • Peilei Hu,
  • Wei Zhang,
  • Dan Xiao and ,
  • Dongsheng Zou,
  • Yingying Ye and
  • Kelin Wang
  • + 2 authors+ 0 author

30 September 2023

Managed and natural vegetation restorations are two vital measures of land restoration; however, their effects on soil microbial communities at a large scale are not clearly understood. Hence, changes in the microbial community composition after 15 y...

(This article belongs to the Special Issue Interactions of Plants, Soil Nutrients, and Microorganisms in the Karst Forest Ecosystems)
  • Article
  • Open Access
40 Citations
9,543 Views
29 Pages

30 April 2014

Temporary Mediterranean ponds are complex ecosystems which support a high diversity of organisms that include heterotrophic microorganisms, algae, crustaceans, amphibians and higher plants, and have the potential to supply food and a resting place to...

(This article belongs to the Special Issue Fatty Acids)
  • Article
  • Open Access
28 Citations
6,440 Views
11 Pages

Effect of Soybean and Maize Rotation on Soil Microbial Community Structure

  • Peng Zhang,
  • Jiying Sun,
  • Lijun Li,
  • Xinxin Wang and ,
  • Xiaoting Li and
  • Jiahui Qu
  • + 1 author+ 0 author

22 January 2019

Examining the soil microbiome structure has great significance in terms of exploring the mechanism behind plant growth changes due to maize (Zea mays L.) and soybean (Glycine max Merr.) crop rotation. This study explored the effects of soil microbial...

(This article belongs to the Special Issue Management and Environmental Factor Contributions to Maize Yield)
  • Article
  • Open Access
37 Citations
5,618 Views
16 Pages

Soil Microbial Community Changes in a Field Treatment with Chlorotoluron, Flufenacet and Diflufenican and Two Organic Amendments

  • María José Carpio,
  • Carlos García-Delgado,
  • Jesús María Marín-Benito,
  • María Jesús Sánchez-Martín and
  • María Sonia Rodríguez-Cruz

8 August 2020

The soil microbial activity, biomass and structure were evaluated in an unamended (S) and organically amended soil treated with two commercial formulations of the herbicides chlorotoluron (Erturon®) and flufenacet plus diflufenican (Herold®)...

(This article belongs to the Special Issue Soil Healthy in Agro-ecosystems)
  • Article
  • Open Access
17 Citations
11,806 Views
18 Pages

The Soil Microbial Community and Grain Micronutrient Concentration of Historical and Modern Hard Red Spring Wheat Cultivars Grown Organically and Conventionally in the Black Soil Zone of the Canadian Prairies

  • Alison G. Nelson,
  • Sylvie A. Quideau,
  • Brenda Frick,
  • Pierre J. Hucl and ,
  • Dil Thavarajah,
  • M. Jill Clapperton and
  • Dean M. Spaner
  • + 2 authors+ 0 author

4 March 2011

Micronutrient deficiencies in the diet of many people are common and wheat is a staple food crop, providing a carbohydrate and micronutrient source to a large percentage of the world’s population. We conducted a field study to compare five Canadian r...

(This article belongs to the Special Issue Plant Breeding for Sustainable Agriculture)
  • Article
  • Open Access
154 Views
20 Pages

Comparison of Wild and Field-Cultivated Thymus satureioides: Effects on Rhizosphere Properties, Essential-Oil Composition, and Biological Activities

  • Meryem Youssfi,
  • Oumaima Akachoud,
  • Btissam Zoubi,
  • Siham Houssayni and ,
  • Anissa Lounès-Hadj Sahraoui,
  • Frédéric Laruelle,
  • Abderrazak Benkebboura,
  • Toufic Elbeaino,
  • Hafida Bouamama and
  • Ahmed Qaddoury
  • + 5 authors+ 0 author

2 November 2026

Thymus satureioides Coss. is an endemic Moroccan medicinal and aromatic species of high socio-economic value, is increasingly threatened by overexploitation and continued reliance on wild harvesting. Sustainable cultivation could reduce pressure on n...

(This article belongs to the Special Issue Medicinal and Aromatic Plants: Sustainable Research, Production and Utilization)
  • Article
  • Open Access
14 Citations
3,753 Views
14 Pages

Organic Amendment for the Recovery of Vineyard Soils: Effects of a Single Application on Soil Properties over Two Years

  • Eliseo Herrero-Hernández,
  • M. Soledad Andrades,
  • Gonzalo Villalba Eguren,
  • María J. Sánchez-Martín and ,
  • M. Sonia Rodríguez-Cruz and
  • Jesús M. Marín-Benito
  • + 1 author+ 0 author

7 February 2022

Spent mushroom substrate (SMS) is the organic residue generated during mushroom cultivation, and it is being produced in ever-greater quantities around the world. Different applications for this residue have been proposed for its valorization, but it...

(This article belongs to the Special Issue Redesign Processes in the Age of the Fourth Industrial Revolution)
  • Article
  • Open Access
11 Citations
4,346 Views
14 Pages

Changes in Soil Microbial Parameters after Herbicide Application in Soils under Conventional Tillage and Non-Tillage

  • Marwa Douibi,
  • María José Carpio,
  • María Sonia Rodríguez-Cruz,
  • María J. Sánchez-Martín and
  • Jesús M. Marín-Benito

19 April 2024

This study evaluated the changes in microbial activity in the course of time following the joint application of the herbicides S-metolachlor, foramsulfuron, and thiencarbazone-methyl to two soils (S1 and S2) under conventional tillage (CT) and non-ti...

(This article belongs to the Section Environmental and Green Processes)
  • Article
  • Open Access
17 Citations
3,594 Views
21 Pages

11 November 2020

Although elevated CO2 (eCO2) in the atmosphere is one of the main factors influencing climate and ecosystem stability, less research on eCO2 in greenhouse soil systems has been conducted, despite their prevalence. In this article, phospholipid fatty...

  • Article
  • Open Access
5 Citations
2,733 Views
20 Pages

Urban Forest Fragmentation Reshapes Soil Microbiome–Carbon Dynamics

  • Melinda Haydee Kovacs,
  • Nguyen Khoi Nghia and
  • Emoke Dalma Kovacs

1 August 2025

Urban expansion fragments once-contiguous forest patches, generating pronounced edge gradients that modulate soil physicochemical properties and biodiversity. We quantified how fragmentation reshaped the soil microbiome continuum and its implications...

(This article belongs to the Special Issue Ecology and Diversity of Soil Microbial Communities in an Era of Global Change)
  • Article
  • Open Access
15 Citations
4,715 Views
13 Pages

15 October 2021

Tricholoma matsutake forms a symbiotic association with coniferous trees, developing mycelial aggregations, called ‘shiro’, which are characterized by distinct chemical and physical properties from nearby forest bulk soil. The fungal diversity living...

(This article belongs to the Special Issue Plant–Fungi Interaction: Two-Edged Sword for Plant Growth, Production and Storage)
  • Article
  • Open Access
562 Views
20 Pages

Effects of Nature-Derived Biostimulants on Wheat Rhizosphere Microbial Biomass, Diversity, and Networks

  • Oumaima Akachoud,
  • Paola Villanueva Rosales,
  • Joël Fontaine,
  • Jérôme Duclercq and ,
  • Natacha Facon,
  • Frédéric Laruelle,
  • Jamil Samsatly,
  • Hacène Meglouli,
  • Mohamed Hijri and
  • Anissa Lounès-Hadj Sahraoui
  • + 5 authors+ 0 author

25 August 2026

Plant biostimulants are increasingly recognized as natural solutions that enhance plant growth and support sustainable agriculture. However, their effects on soil microbial communities remain poorly understood. This study evaluated three biostimulant...

(This article belongs to the Section Agricultural Soils)
  • Article
  • Open Access
2 Citations
1,504 Views
22 Pages

30 September 2025

Despite the increasing recognition of the role of urban orchard ecosystems in sustainable urban development, the mechanistic understanding of how tree species soil biochemical heterogeneity drives microbial community assembly, the spatial patterns go...

(This article belongs to the Section Fruit Production Systems)
  • Article
  • Open Access
1,403 Views
23 Pages

Background and Objectives: Polyethylene (PE) mulching enhances crop productivity through microclimate optimization but introduces synthetic polymer-derived compounds into agricultural soils. Despite widespread use, biochemical and microbial impacts o...

  • Article
  • Open Access
330 Views
20 Pages

Enhancing Sustainable Agriculture: Machine Learning-Based Soil Health Prediction in Permaculture

  • Mohamed El Bakkari,
  • Nabila Rabbah,
  • Mourad Bouneffa,
  • Nicolas Waldhoff and
  • Abdelwahed Touati

Soil health is central to sustainable agriculture, but remains challenging to assess in diversified agroecosystems such as permaculture. Soil condition reflects the interaction of physical, chemical, and biological properties, but practical assessmen...

  • Article
  • Open Access
43 Citations
7,149 Views
18 Pages

30 October 2017

Leaf and root litter decomposition has been a major research focus. However, the possible effects of belowground microbial community structure and diversity on this process are poorly understood. Understanding the biochemical mechanisms controlling a...

(This article belongs to the Special Issue Forest Fine Roots in Changing Climate)