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Keywords = Dalbergia odorifera

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16 pages, 2798 KB  
Article
Dalbergia odorifera Volatile Oil Alleviates Microsphere-Induced Myocardial Microcirculatory Dysfunction via Inhibiting Neutrophil Extracellular Traps Formation
by Yinju Liu, Wei Hou, Zengcai Liu, Yanlong Zhou, Xing Dai, Dongdong Jia, Lanying Chen and Ronghua Liu
Pharmaceuticals 2026, 19(6), 959; https://doi.org/10.3390/ph19060959 - 20 Jun 2026
Viewed by 439
Abstract
Background/Objectives: Myocardial microcirculatory dysfunction is a critical pathological feature of cardiovascular diseases, closely associated with inflammation, oxidative stress, and excessive neutrophil activation. Neutrophil extracellular traps (NETs) serve as crucial mediators of myocardial microvascular inflammatory injury. Dalbergia odorifera volatile oil (DOVO) demonstrates anti-inflammatory [...] Read more.
Background/Objectives: Myocardial microcirculatory dysfunction is a critical pathological feature of cardiovascular diseases, closely associated with inflammation, oxidative stress, and excessive neutrophil activation. Neutrophil extracellular traps (NETs) serve as crucial mediators of myocardial microvascular inflammatory injury. Dalbergia odorifera volatile oil (DOVO) demonstrates anti-inflammatory and antioxidant properties; however, its protective role against myocardial microcirculatory damage and its regulatory effect on NET formation remain inadequately characterized. This study investigates the protective effects of DOVO on myocardial microcirculatory disturbances and elucidates the underlying mechanisms related to NETs. Methods: A rat model of myocardial microcirculatory dysfunction was established through polyethylene microsphere injection, and an in vitro neutrophil inflammation model was generated using differentiated HL-60 cells. DOVO was administered at various doses both in vivo and in vitro, and hemodynamics, inflammatory cytokines, oxidative stress, and NET-related markers, including MPO and CitH3, were analyzed. Results: DOVO dose-dependently ameliorated microcirculatory impairment, hemodynamic disorders, inflammation, and oxidative stress in rats, significantly suppressing NET formation. In differentiated HL-60 cells, DOVO similarly reduced inflammatory gene expression and inhibited LPS-induced NETs production by downregulating MPO and CitH3. Conclusions: DOVO suggests a protective effect against myocardial microcirculatory injury by inhibiting oxidative stress, inflammatory responses, and subsequent NET formation. These findings elucidate a novel mechanism by which DOVO alleviates microcirculation-related cardiac damage and provide a theoretical basis for its application in cardiovascular injury. Full article
(This article belongs to the Section Natural Products)
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18 pages, 10283 KB  
Article
Study on Drying Characteristics of Juvenile Wood of Dalbergia odorifera T.C.Chen
by Jia Liu, Tongtong Li, Jianing Li and Honghai Liu
Materials 2026, 19(11), 2234; https://doi.org/10.3390/ma19112234 - 25 May 2026
Viewed by 312
Abstract
Dalbergia odorifera is an economically valuable timber species. While its plantation-grown stock displays unique juvenile wood characteristics, current drying research is insufficient and lacks direct applicability to the heartwood. This study investigated the drying characteristics of a 17-year-old plantation-grown Dalbergia odorifera from Hainan [...] Read more.
Dalbergia odorifera is an economically valuable timber species. While its plantation-grown stock displays unique juvenile wood characteristics, current drying research is insufficient and lacks direct applicability to the heartwood. This study investigated the drying characteristics of a 17-year-old plantation-grown Dalbergia odorifera from Hainan using the 100 °C drying test method. Conventional drying technology was optimized by adjusting key parameters, including drying rate, moisture content variation, residual stress, and drying defects. The results showed that the overall drying defect grade of 25 mm-thick Dalbergia odorifera specimens were Grade 3, and the superior drying quality was achieved under relatively low-temperature and high-humidity conditions. The optimal drying schedule was comprehensively determined as follows: an initial temperature of 48 °C with a wet-bulb depression of 3 °C, a final temperature of 68 °C with a wet-bulb depression of 12 °C, and a drying duration of approximately 12 days to reduce the moisture content (MC) from 50% to 10%. Under this schedule, all drying quality indicators of the sawn timber met Grade 2 standards, and the color of wood has been well preserved. These results provided a theoretical and technical reference for improving the utilization efficiency of wood and the industrial drying of plantation-grown Dalbergia odorifera. Full article
(This article belongs to the Section Advanced Materials Characterization)
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16 pages, 2778 KB  
Article
Genome-Wide Characterization and Transcriptional Profiling of the WRKY Gene Family During Heartwood Formation in Dalbergia odorifera
by Ruoke Ma, Yueyao Xu, Heng Liu, Qianying Wei, Jia Luo, Boling Liu and Yunlin Fu
Genes 2026, 17(4), 386; https://doi.org/10.3390/genes17040386 - 28 Mar 2026
Viewed by 640
Abstract
Background: The WRKY transcription factor family represents one of the most crucial transcription factor families in plants, regulating diverse physiological processes. The heartwood of Dalbergia odorifera is a prized material for both high-quality rosewood and traditional medicinal applications, exhibiting exceptional economic value. However, [...] Read more.
Background: The WRKY transcription factor family represents one of the most crucial transcription factor families in plants, regulating diverse physiological processes. The heartwood of Dalbergia odorifera is a prized material for both high-quality rosewood and traditional medicinal applications, exhibiting exceptional economic value. However, the roles of WRKY transcription factors in the growth and development of D. odorifera, particularly their correlation with heartwood formation, remain unexplored. Methods: WRKY transcription factors were identified through bioinformatics analysis using the published genome data of D. odorifera. Phylogenetic comparative analysis was performed based on the Arabidopsis classification system. Collinearity analysis was conducted to investigate the evolutionary dynamics and expansion mechanisms of the WRKY gene family, and differential expression analysis was performed across tissues. Results: A total of 94 WRKY genes were unevenly distributed across 10 chromosomes and systematically designated as DodWRKY1 to DodWRKY94 according to their chromosomal positions. The WRKY family was classified into three major clades (Groups I, II, and III), with Group II further subdivided into five subgroups (IIa–IIe). Purifying selection served as the primary force shaping the WRKY family, with whole-genome or segmental duplication acting as the dominant expansion mechanism; these duplication events contributed to functional divergence, whereas genes within the same subgroup retained conserved structural features and motif compositions. DodWRKY14 (subgroup IIb) and DodWRKY58/68 (subgroup IIc) were highly expressed in the transition zone, suggesting a potential involvement in heartwood formation. Conclusions: This study provides a comprehensive characterization of the DodWRKY family and identifies candidate genes associated with heartwood formation, thereby establishing a foundation for further investigation into the molecular mechanisms underlying heartwood development. Full article
(This article belongs to the Collection Feature Papers in Bioinformatics)
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21 pages, 5183 KB  
Article
4-Methoxydalbergione Induces Dual Activation of Apoptosis and Autophagy-Dependent Cell Death via ROS–MAPK Signaling in Human Neuroblastoma Cells
by Tonking Bastola, Ren-Bo An, Chi-Su Yoon, Hyuncheol Oh and Jungwon Seo
Cells 2026, 15(5), 431; https://doi.org/10.3390/cells15050431 - 28 Feb 2026
Cited by 1 | Viewed by 1113
Abstract
Neuroblastoma, the predominant extracranial solid malignancy in the pediatric population, remains a major clinical challenge due to pronounced intratumoral heterogeneity and intrinsic therapeutic resistance. 4-Methoxydalbergione (4-MD), a benzoquinone derivative isolated from Dalbergia odorifera, has demonstrated anticancer activity in several tumor models; however, [...] Read more.
Neuroblastoma, the predominant extracranial solid malignancy in the pediatric population, remains a major clinical challenge due to pronounced intratumoral heterogeneity and intrinsic therapeutic resistance. 4-Methoxydalbergione (4-MD), a benzoquinone derivative isolated from Dalbergia odorifera, has demonstrated anticancer activity in several tumor models; however, its effects and underlying cell death mechanisms in neuroblastoma remain unclear. Here, we investigated the cytotoxic effects of 4-MD in human neuroblastoma cells using cell viability assays, flow cytometry, immunoblotting, and fluorescence microscopy. 4-MD reduced cell viability in a dose- and time-dependent manner and induced caspase-3 cleavage accompanied by MAPK activation, indicating apoptotic cell death. Concurrently, 4-MD promoted autophagosome accumulation, as evidenced by LC3-II accumulation, acidic vesicular organelle formation, ATG5 upregulation, and p62 degradation, in association with activation of the AMPK/mTOR/ULK1 signaling axis. Pharmacological inhibition of autophagy significantly attenuated 4-MD-induced cytotoxicity without affecting caspase-3 activation, demonstrating a caspase-independent, pro-death role of autophagy. Reactive oxygen species (ROS) acted as a critical upstream mediator, as antioxidant treatment suppressed both apoptotic and autophagic signaling. Moreover, inhibition of Na+,K+-ATPase with ouabain selectively reduced autophagy-dependent cell death, implicating autosis as an additional mechanism. Notably, 4-MD exhibited minimal toxicity toward primary cortical neurons. Collectively, these findings demonstrate that 4-MD engages multiple, non-redundant cell death pathways through coordinated ROS–MAPK–AMPK/mTOR/ULK1 signaling, highlighting its potential to overcome therapeutic resistance in heterogeneous neuroblastoma cells. Full article
(This article belongs to the Special Issue Signal Transduction and Targeted Therapy for Tumors)
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19 pages, 6454 KB  
Article
Physiological and Biochemical Characters of Eight Native Tree Seedings in Guangdong Province During Drought Stress and Rewatering Treatment
by Qiutong Liu, Zhihong Liu, Jingquan Liu, Kexin Li, Jieyu Lin, Shufan Lin, Zijia Su, Xinyi Fan, Yv Su and Zujing Chen
Plants 2026, 15(4), 528; https://doi.org/10.3390/plants15040528 - 8 Feb 2026
Cited by 1 | Viewed by 1168
Abstract
Native tree species play a crucial role in addressing the challenge of seasonal drought in South China. In this study, one-year-old seedlings of eight native tree species in Guangdong Province were subjected to continuous simulated drought stress and rewatering. In order to identify [...] Read more.
Native tree species play a crucial role in addressing the challenge of seasonal drought in South China. In this study, one-year-old seedlings of eight native tree species in Guangdong Province were subjected to continuous simulated drought stress and rewatering. In order to identify key drought-resistant traits and best performing tree species, physiological and biochemical responses were assessed through 21 indicators. The results showed the following: (1) All species exhibited responses to drought stress prior to the fourth day, as evidenced by reductions in morphological indicators (crown breadth and ground diameter) and photosynthetic parameters (chlorophyll content, transpiration rate, net photosynthetic rate and stomatal conductance), along with increases in osmotic substances (soluble protein and proline) and antioxidant-related indicators malondialdehyde, peroxidase and superoxide dismutase). (2) The crown breadth, leaf relative water content, chlorophyll content, and ascorbate peroxidase activity were significantly decreased under drought stress. And these indicators were not recovered to pre-stress levels following rewatering. (3) Mantel tests revealed that growth morphological characteristics, particularly plant height, were significantly and positively correlated with most osmotic substances indicators (p < 0.001). Specifically, plant height showed the strongest coupling with these traits, with Mantel’s r ranging from 0.44 to 0.89. In addition, the leaf relative water content, net photosynthetic rate, superoxide dismutase, and malondialdehyde were regarded as the key drought-resistant traits, providing insights into future research on plant improvement, stress-resilience breeding and even drought resistance mechanisms. (4) The eight tree species are ranked from most to least drought-resistant as follows: Zenia insignis, Michelia macclurei, Phoebe zhennan, Phoebe bournei, Erythrophleum fordii, Dalbergia odorifera, Cinnamomum burmanni and Michelia chapensis. This study provides a scientific basis for selecting tree species for afforestation in seasonally arid regions. Full article
(This article belongs to the Special Issue The Growth of Plants in Arid Environments)
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21 pages, 6874 KB  
Article
Responses of Soil Microbial Communities and Anthracnose Dynamics to Different Planting Patterns in Dalbergia odorifera
by Long Xu, Kexu Long, Yichi Zhang, Guoying Zhou and Junang Liu
Microorganisms 2025, 13(12), 2876; https://doi.org/10.3390/microorganisms13122876 - 18 Dec 2025
Viewed by 792
Abstract
Anthracnose is one of the major diseases affecting Dalbergia odorifera T. Chen. However, the soil microbial mechanisms underlying D. odorifera responses to anthracnose remain largely unexplored. This study investigated three planting systems: a Dalbergia odorifera monoculture (J); a mixed plantation of D. odorifera [...] Read more.
Anthracnose is one of the major diseases affecting Dalbergia odorifera T. Chen. However, the soil microbial mechanisms underlying D. odorifera responses to anthracnose remain largely unexplored. This study investigated three planting systems: a Dalbergia odorifera monoculture (J); a mixed plantation of D. odorifera and Pterocarpus macrocarpus (JD); and a composite mixed plantation of D. odorifera, P. macrocarpus, and Clinacanthus nutans (JDY). Using amplicon sequencing technology for soil microbial analysis and combining soil physical and chemical properties with disease severity, we comprehensively analyzed changes in soil microbial community structure and function across different planting modes. The results showed that the diverse mixed mode (JD, JDY) significantly improved soil physicochemical properties and promoted soil nutrient cycling. Redundancy analysis (RDA) indicated that soil organic matter (SOM) and disease severity, quantified by the area under the disease progress curve (AUDPC), were the primary environmental drivers of microbial community variation. Genera positively correlated with SOM and negatively correlated with AUDPC were significantly enriched in JDY and JD, whereas genera showing opposite relationships were predominantly enriched in J. Functional predictions revealed enhanced nutrient-cycling capacities in JD and JDY, with JDY uniquely harboring functional groups such as Arbuscular Mycorrhizal, Epiphyte, and Lichenized taxa. In contrast, microbial functions in the J plantation were mainly limited to environmental amelioration. Co-occurrence network analysis further showed that as planting patterns shifted from J to JDY, microbial communities evolved from competition-dominated networks to cooperative defensive networks, integrating efficient decomposition with strong pathogen suppression potential. The study demonstrates that complex mixed planting systems regulate soil properties, enhance the enrichment of key functional microbial taxa, reshape community structure and function, and ultimately enable ecological control of anthracnose disease. This study provides new perspectives and theoretical foundations for ecological disease management in plantations of rare tree species and for microbiome-based ecological immunization strategies. Full article
(This article belongs to the Special Issue Advances in Plant–Soil–Microbe Interactions)
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23 pages, 4845 KB  
Article
Accelerating Dalbergia odorifera Plantation Breeding: SSR-Based Genetic Diversity and Trait Associations for Enhanced Heartwood Yield
by Xinyue Hou, Ruxue Bai, Rongtao Li, Jiawen Li, Yun Yang, Haoling Li, Bo Chen, Liangming Huang, Hui Meng and Jianhe Wei
Plants 2025, 14(24), 3787; https://doi.org/10.3390/plants14243787 - 12 Dec 2025
Viewed by 1457
Abstract
Dalbergia odorifera T. Chen possesses significant aromatic, medicinal, and timber value, yet its wild populations are critically endangered due to habitat degradation. Breeding programs are urgently needed to address resource shortages, but the suitability of large-scale plantations as alternative genetic resources remains unverified. [...] Read more.
Dalbergia odorifera T. Chen possesses significant aromatic, medicinal, and timber value, yet its wild populations are critically endangered due to habitat degradation. Breeding programs are urgently needed to address resource shortages, but the suitability of large-scale plantations as alternative genetic resources remains unverified. This study systematically evaluated the genetic diversity of 380 individuals from five populations using 24 polymorphic SSR markers, identifying 278 alleles. The results demonstrated a moderate level of genetic diversity in plantation populations, comparable to wild resources. Additionally, nine phenotypic traits were measured in 70 individuals. Correlation analysis revealed that the heartwood ratio (HWR) was significantly positively correlated with diameter at breast height (DBH) and ground diameter (GD) (p ≤ 0.05). Our association analysis, based on general linear (GLM) and mixed linear models (MLM), revealed two key findings: one locus (96c-345) was significantly associated with diameter traits, and four loci (34a-241, S03-265, JXHT097-252, JXHT136-270) were strongly linked to the HWR (p ≤ 0.01). This research provides initial evidence that plantations are viable substitutes for wild germplasm and establishes a foundation for marker-assisted breeding in this valuable species. Full article
(This article belongs to the Special Issue Genetic Breeding of Trees)
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21 pages, 4817 KB  
Article
Root Functional Specialization in Dalbergia odorifera Reveals Localized Molecular Adaptations to Karst Rocky Desertification Stress
by Bizhang Liu, Guili Qin, Yinying He, Wending Tan, Xiaojuan Ming, Shuzhong Yu and Xianyu Yao
Plants 2025, 14(24), 3740; https://doi.org/10.3390/plants14243740 - 8 Dec 2025
Viewed by 731
Abstract
Dalbergia odorifera, a cornerstone tree species for ecological restoration in karst regions, exhibits remarkable adaptability to karst rocky desertification (KRD) environments characterized by high heterogeneity and nutrient poverty. Yet, the mechanisms underlying its root system’s response to spatially variable KRD stress remain [...] Read more.
Dalbergia odorifera, a cornerstone tree species for ecological restoration in karst regions, exhibits remarkable adaptability to karst rocky desertification (KRD) environments characterized by high heterogeneity and nutrient poverty. Yet, the mechanisms underlying its root system’s response to spatially variable KRD stress remain poorly elucidated. In this study, a split-root system was employed to simulate heterogeneous substrate conditions, including loam, uniform gravel (global stress), and partitioned loam/gravel (partial stress). We found that under partial stress, the root system underwent functional specialization, and roots in loam enhanced resource acquisition, whereas roots in gravel significantly elevated stress tolerance. This was supported by increased root:shoot ratio, improved nutrient conservation, and localized upregulation of key enzymes and metabolites. Multi-omics profiling further uncovered profound reprogramming of critical pathways such as phenylpropanoid biosynthesis, fatty acid metabolism, and glutathione metabolism, highlighting robust antioxidant defense and membrane stabilization mechanisms. Our findings demonstrate that D. odorifera optimizes resource use in heterogeneous karst habitats through spatial division of labor at the root system level, orchestrated by integrated morphological, physiological, and molecular adaptations. This study provides a novel perspective on plant adaptation to environmental heterogeneity and offers practical insights for cultivating stress-resilient trees and restoring degraded karst ecosystems. Full article
(This article belongs to the Section Plant Response to Abiotic Stress and Climate Change)
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17 pages, 5665 KB  
Article
Insights into Variations in Chemical Profiles and Antioxidant Properties Among Different Parts of Dalbergia odorifera
by Yujie Xiao, Yakui Zhou, Jianhe Wei and Xiangsheng Zhao
Plants 2025, 14(21), 3279; https://doi.org/10.3390/plants14213279 - 27 Oct 2025
Cited by 2 | Viewed by 1181
Abstract
Dalbergia odorifera, a rare and precious medicinal plant, has been used to treat cardio- and cerebrovascular diseases in China for thousands of years. D. odorifera heartwood (DOH) is usually considered to be the main part used for medicine, and other parts (leaf, [...] Read more.
Dalbergia odorifera, a rare and precious medicinal plant, has been used to treat cardio- and cerebrovascular diseases in China for thousands of years. D. odorifera heartwood (DOH) is usually considered to be the main part used for medicine, and other parts (leaf, DOL; flower, DOF; pod, DOP) of D. odorifera are neglected. In this paper, a systematic comparative study was conducted on phytochemicals and antioxidant properties of four parts of D. odorifera. A total of 72 volatile organic compounds (VOCs) and 820 nonvolatile organic compounds (NVOCs) were identified in four D. odorifera parts by GC-MS and UPLC-ESI-Q/TRAP-MS/MS, respectively. Differences in phytochemical profiles among the different parts were observed. DOH exhibited a significantly different level of trans-nerolidol and flavonoids compared to the other parts. Taking into account all the parameters measured, methanolic extracts of DOH, DOL, and DOF had good antioxidant activity, with the highest value in DOH, followed by DOL and DOF. Moreover, the strong antioxidant activity of the methanolic extract may be related to the flavonoid components. The results indicated that DOL and DOF also have potential for further development and utilization. Full article
(This article belongs to the Section Phytochemistry)
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17 pages, 3096 KB  
Article
Activation of Sirtuin3 by 6,4′-Dihydroxy-7-methoxyflavanone Against Myoblasts Senescence by Attenuating D-Galactose-Induced Oxidative Stress and Inflammation
by Bingsi Li, Yuxuan Gu, Libing Zhou, Rui Chen, Yiwei Liu, Zexuan Wan, Ziyi Liang, Yukang Wang, Renlei Ji and Zhian Liu
Nutrients 2025, 17(20), 3298; https://doi.org/10.3390/nu17203298 - 20 Oct 2025
Cited by 3 | Viewed by 1550
Abstract
Background/Objective: Cellular senescence is increasingly recognized as a key mechanism underlying sarcopenia, an age-related muscle disorder with no effective therapeutic. 6,4′-Dihydroxy-7-methoxyflavanone (DMF), a flavonoid isolated from Dalbergia odorifera T. Chen, has shown anti-senescence potential. This study aimed to investigate the protective effects of [...] Read more.
Background/Objective: Cellular senescence is increasingly recognized as a key mechanism underlying sarcopenia, an age-related muscle disorder with no effective therapeutic. 6,4′-Dihydroxy-7-methoxyflavanone (DMF), a flavonoid isolated from Dalbergia odorifera T. Chen, has shown anti-senescence potential. This study aimed to investigate the protective effects of DMF against myoblasts senescence and elucidate the underlying molecular mechanisms. Method: A cellular model of senescence was established in C2C12 myoblasts using D-galactose (D-gal). The effects of DMF pretreatment were evaluated by assessing senescence phenotypes, myogenic differentiation, and mitochondrial function. The role of Sirtuin3 (SIRT3) was confirmed using siRNA-mediated knockdown. Results: DMF Pre-treatment effectively attenuated D-gal-induced senescence, as indicated by restored proliferation, reduced senescence-associated β-galactosidase activity, decreased DNA damage, and the downregulation of p53, p21Cip1/WAF1 and p16INK4a. Furthermore, DMF rescued myogenic differentiation capacity, enhancing the expression of Myoblast determination protein 1, Myogenin, Myosin heavy chain and Muscle-specific regulatory factor 4, and promoting myotube formation. Mechanistically, DMF was identified as a SIRT3 activator. It enhanced SIRT3 expression and activity, leading to the deacetylation and activation of the mitochondrial antioxidant enzyme superoxide dismutase 2. This consequently reduced mitochondrial reactive oxygen species, improved mitochondrial membrane potential and ATP production, and suppressed the NF-κB pathway by inhibiting IκBα phosphorylation and p65 acetylation/nuclear translocation. Crucially, all the beneficial effects of DMF—including oxidative stress reduction, mitochondrial functional recovery, anti-inflammatory action, and ultimately, the attenuation of senescence and improvement of myogenesis—were abolished upon SIRT3 knockdown. Conclusions: Our findings demonstrate that DMF alleviates myoblasts senescence and promotes myogenic differentiation by activating the SIRT3-SOD2 pathway, thereby reducing oxidative stress and NF-κB-driven inflammation responses. DMF emerges as a promising therapeutic candidate for sarcopenia. Full article
(This article belongs to the Special Issue Nutrient Interaction, Metabolic Adaptation and Healthy Aging)
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19 pages, 3177 KB  
Article
Phosphorus-Driven Stem-Biased Allocation: NPK Synergy Optimizes Growth and Physiology in Dalbergia odorifera T. C. Chen Seedlings
by Mengwen Zhang, Chuanteng Huang, Ling Lin, Lin Chen, Xiaoli Yang, Xiaona Dong, Jiaming Song and Feifei Chen
Plants 2025, 14(16), 2545; https://doi.org/10.3390/plants14162545 - 15 Aug 2025
Cited by 1 | Viewed by 1565
Abstract
Valued for furniture, crafts, and medicine, Dalbergia odorifera T. C. Chen confronts critically depleted wild populations and slow cultivation growth, necessitating precision nutrient formulation to overcome physiological constraints. Using a ‘3414’ regression design with four levels of N, P, and K, this study [...] Read more.
Valued for furniture, crafts, and medicine, Dalbergia odorifera T. C. Chen confronts critically depleted wild populations and slow cultivation growth, necessitating precision nutrient formulation to overcome physiological constraints. Using a ‘3414’ regression design with four levels of N, P, and K, this study identified phosphorus (P) as the most influential nutrient in regulating growth (P > N > K). Maximal growth enhancement occurred under T7 (N2P3K2), with height and basal diameter increments increasing by 239% and 128% versus controls (p < 0.05). Both traits exhibited progressive gains with rising P but unimodal responses to N and K, initially increasing then declining. T7 boosted total biomass by 50% (p < 0.05) with stem-biased partitioning (stem > root > leaf; 52%, 26%, 22%). Photosynthetic capacity increased significantly under T7 (p < 0.05), driven by P-mediated chlorophyll gains (Chla + 70%; Chlb + 75%) and an 82% higher net photosynthetic rate. Metabolic shifts revealed peak soluble sugar in T7 (+139%) and soluble protein in T9 (+226%) (p < 0.05), associated primarily with P and K availability, respectively. Correlation networks revealed significant associations among structural growth, photosynthesis, and metabolism. Principal component analysis established T7 as optimal, defining a “medium-N, high-P medium-K” precision fertilization protocol. These findings elucidate a phosphorus-centered regulatory mechanism governing growth in D. odorifera, providing a scientific foundation for efficient cultivation. Full article
(This article belongs to the Section Plant Nutrition)
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16 pages, 4545 KB  
Article
Patterns of Heartwood Formation and Its Key Response Signaling Molecules in Dalbergia odorifera T. Chen
by Jiawen Li, Yuanjing Zhu, Guangyao Ma, Haoling Li, Yun Yang, Hui Meng and Jianhe Wei
Int. J. Mol. Sci. 2025, 26(10), 4629; https://doi.org/10.3390/ijms26104629 - 12 May 2025
Cited by 5 | Viewed by 1572
Abstract
The heartwood of Dalbergia odorifera T. Chen has garnered significant attraction due to its high medicinal, aromatic and timber values; however, its formation mechanism remains unexplored. This study utilized the sapwood (N-B), transition zone (N-T), and heartwood (N-H) of the xylem of 15-year-old, [...] Read more.
The heartwood of Dalbergia odorifera T. Chen has garnered significant attraction due to its high medicinal, aromatic and timber values; however, its formation mechanism remains unexplored. This study utilized the sapwood (N-B), transition zone (N-T), and heartwood (N-H) of the xylem of 15-year-old, naturally heartwood-forming D. odorifera to observe the nuclei of parenchyma cells, revealing that no living cells were specialized in synthesizing the secondary metabolites of heartwood in the N-H. Additionally, analysis of gene expression patterns across different compartments indicated that differentially expressed genes (DEGs) involved in the synthesis of secondary metabolites of heartwood were primarily up-regulated in the N-T, suggesting that the pattern of heartwood formation in D. odorifera follows the Type-I (Robinia-Type) model, wherein secondary metabolites are synthesized in situ in the ray parenchyma cells of the N-T, followed by programmed cell death (PCD) leading to heartwood formation. Furthermore, DEGs related to ethylene biosynthesis and signaling pathways were up-regulated in the N-T, suggesting that ethylene signaling may play a critical role in regulating the heartwood formation process of D. odorifera. Treatment of suspension cells with polyethylene glycol (PEG) and an ethylene synthesis inhibitor (AVG) further confirmed that ethylene acts as a key signaling molecule in the formation of heartwood-like material in D. odorifera. This study provides initial insights into the molecular mechanisms underlying heartwood formation in D. odorifera and offers a foundation for developing heartwood formation and promotion technologies. Full article
(This article belongs to the Section Bioactives and Nutraceuticals)
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20 pages, 13101 KB  
Article
Dalbergia odorifera Trans-Nerolidol Protects Against Myocardial Ischemia via Downregulating Cytochrome- and Caspases-Signaling Pathways in Isoproterenol-Induced Rats
by Canhong Wang, Yulan Wu, Bao Gong, Xiangsheng Zhao, Hui Meng, Junyu Mou, Xiaoling Cheng, Yinfeng Tan and Jianhe Wei
Int. J. Mol. Sci. 2025, 26(5), 2251; https://doi.org/10.3390/ijms26052251 - 3 Mar 2025
Cited by 8 | Viewed by 1814
Abstract
Dalbergia odorifera is widely used to treat cardiovascular diseases. Our research group found that Dalbergia odorifera volatile oil has a good anti-myocardial ischemic effect, and its main pharmacodynamic components are trans-nerolol and its oxides. However, the exact mechanisms underlying this effect have not [...] Read more.
Dalbergia odorifera is widely used to treat cardiovascular diseases. Our research group found that Dalbergia odorifera volatile oil has a good anti-myocardial ischemic effect, and its main pharmacodynamic components are trans-nerolol and its oxides. However, the exact mechanisms underlying this effect have not yet been elucidated. This study aimed to explore the potential myocardial protective effects of trans-nerolol and its underlying molecular mechanisms. Molecular docking was used to predict and visualize the possible mechanism of the anti-apoptotic myocardial protection by trans-nerolol. The myocardial protective effect of trans-nerolol was evaluated by observing pathological injury, myocardial enzyme levels, oxidation, antioxidant levels, and the expression of related proteins. Molecular docking results showed that trans-nerolol binds closely to cytochrome C (Cytc) and apoptosis-related proteins, suggesting that it may play a role in interacting with these target proteins. The results showed that pre-treatment with dose-dependent trans-nerolol significantly mitigated the myocardial histological damage; decreased lactate dehydrogenase (LDH), creatinine kinase (CK), alanine transaminase (ALT), and aspartate transaminase (AST) levels; reduced nitric oxide (NO) production, hydrogen peroxide (H2O2), and lipid peroxide (LPO); and increased the total antioxidant content (T-AOC), glutathione (GSH), catalase (CAT), and superoxide dismutase (SOD) activities compared with the model group. In addition, dose-dependent trans-nerolol significantly increased the Na+-K+-ATPase and Ca2+-Mg2+-ATPase levels. Moreover, trans-nerolol markedly reduced the endogenous and external apoptotic pathways; downregulated the protein expression of Cytc, apoptotic protease activating factor-1 (Apaf1), Fibroblast-associated (Fas), Cysteine-aspartate protease 3 (Caspase3), Cysteine-aspartate protease 8 (Caspase8), and Cysteine-aspartate protease 9 (Caspase9); and upregulated the expression of Heat shock protein 70 (Hsp70) and B-cell lymphoma-2 (Bcl-2). These data indicate that trans-nerolol exerts protective effects against myocardial ischemia (MI), and its mechanism is associated with the suppression of the Cytc- and caspase-signaling pathways. Trans-nerolol has a therapeutic effect on MI, and its mechanism of action is related to its anti-apoptotic effect. These results suggest that Dalbergia odorifera has a potential role to be developed as an MI-promoting therapeutic agent. Full article
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15 pages, 3717 KB  
Article
Impact of Karst Rocky Desertification on N-Fixing Tree Species Root System and Bacteria
by Shuzhong Yu, Chunhui Guo and Xianyu Yao
Forests 2025, 16(3), 425; https://doi.org/10.3390/f16030425 - 26 Feb 2025
Viewed by 1225
Abstract
The study aimed to investigate the effect of soil textural or soil mineral fraction substrates (loam and gravel) from karst desertification areas on the rhizospheric and root-associated bacterial community structure of Dalbergia odorifera (an N-fixing tree), using high-throughput sequencing techniques, based on treatment [...] Read more.
The study aimed to investigate the effect of soil textural or soil mineral fraction substrates (loam and gravel) from karst desertification areas on the rhizospheric and root-associated bacterial community structure of Dalbergia odorifera (an N-fixing tree), using high-throughput sequencing techniques, based on treatment methods of whole-root and two-chambered split-root systems. Further, this study determined the relative importance of the plant and substrate properties on the rhizospheric, non-rhizospheric and endospheric bacteria composition. The type of substrate exerts a significant influence on both rhizospheric and non-rhizospheric bacterial communities, whereas endophytic communities within the root system are predominantly determined by plant species rather than substrate type. The analysis revealed that endospheric bacterial diversity was considerably lower than that of rhizospheric and non-rhizospheric communities. Cluster analysis indicated that endospheric bacterial samples formed a distinct cluster, while rhizospheric and non-rhizospheric bacteria in the soil substrate grouped into one branch, and those in the gravel substrate formed another branch. In comparison to the gravel treatments, a reduced bacterial abundance was observed in the rhizosphere and non-rhizosphere of nitrogen-fixing plants in soil, potentially due to the interplay of lower nutrient availability and increased porosity in gravel treatments. Proteobacteria, which are involved in the nitrogen cycle, exhibited the highest abundance. In contrast, Acidobacteria, Firmicutes and other bacterial phyla involved in nutrient cycling demonstrated higher abundance, with their presence being more pronounced in extreme environments, such as gravel treatments, compared to soil substrates. These results suggest that nitrogen-fixing plants can respond to extreme environments by increasing bacterial abundance. The findings of this study provide a theoretical basis for the use of D. odorifera for ecosystem recovery and vegetation restoration. Full article
(This article belongs to the Section Forest Biodiversity)
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Article
Amelioration of Cancer Cachexia by Dalbergia odorifera Extract Through AKT Signaling Pathway Regulation
by Phuong T. Ho, Eulyong Park, Quynh Xuan Thi Luong, Meutia Diva Hakim, Phuong T. Hoang, Thuy T. B. Vo, Kantawong Kawalin, Hee Kang, Taek-Kyun Lee and Sukchan Lee
Nutrients 2024, 16(21), 3671; https://doi.org/10.3390/nu16213671 - 28 Oct 2024
Cited by 5 | Viewed by 2808
Abstract
Background/Objectives: Cancer cachexia is a multifactorial syndrome characterized by the progressive loss of skeletal muscle mass and adipose tissue. Dalbergia odorifer is widely used in traditional medicine in Korea and China to treat various diseases. However, its exact role and underlying mechanism in [...] Read more.
Background/Objectives: Cancer cachexia is a multifactorial syndrome characterized by the progressive loss of skeletal muscle mass and adipose tissue. Dalbergia odorifer is widely used in traditional medicine in Korea and China to treat various diseases. However, its exact role and underlying mechanism in regulating cancer cachexia have not been elucidated yet. This research was conducted to investigate the effect of D. odorifer extract (DOE) in preventing the development of cancer-induced cachexia symptoms and figure out the relevant mechanisms. Methods: A cancer cachexia model was established in Balb/c mice using the CT26 colon carcinoma cell line. To evaluate the anti-cachexia effect of Dalbergia odorifer extract (DOE), CT26-bearing mice were orally administered with DOE at concentrations of 50 and 100 mg/kg BW for 14 days. C2C12 myotubes and 3T3L1 adipocytes were treated with 80% CT26 conditioned medium, DOE, and wortmannin, a particular AKT inhibitor to determine the influence of DOE in the AKT signaling pathway. Mice body weight, food intake, myofiber cross-sectional area, adipocyte size, myotube diameter, lipid accumulation, and relevant gene expression were analyzed. Results: The oral administration of DOE at doses of 50 and 100 mg/kg body weight to CT26 tumor-bearing mice resulted in a significant reduction in body weight loss, an increase in food intake, and a decrease in serum glycerol levels. Furthermore, DOE treatment led to an increase in muscle mass, larger muscle fiber diameter, and elevated expression levels of MyH2 and Igf1, while simultaneously reducing the expression of Atrogin1 and MuRF1. DOE also attenuated adipose tissue wasting, as evidenced by increased epididymal fat mass, enlarged adipocyte size, and upregulated Pparγ expression, alongside a reduction in Ucp1 and IL6 levels. In cachectic C2C12 myotubes and 3T3-L1 adipocytes induced by the CT26 conditioned medium, DOE significantly inhibited muscle wasting and lipolysis by activating the AKT signaling pathway. The treatment of wortmannin, a specific AKT inhibitor, effectively neutralized DOE’s impact on the AKT pathway, myotube diameter, and lipid accumulation. Conclusions: DOE ameliorates cancer cachexia through the expression of genes involved in protein synthesis and lipogenesis, while suppressing those related to protein degradation, suggesting its potential as a plant-derived therapeutic agent in combating cancer cachexia. Full article
(This article belongs to the Section Nutrition and Metabolism)
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