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Keywords = C. vulgare

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17 pages, 1853 KB  
Article
Effect of Essential Oils on Postharvest Management of Anthracnose Associated with Colletotrichum gloeosporioides (Penz.) Penz & Sacc., in Mango
by Petra Andrade-Hoyos, Marianguadalupe Hernández-Arenas, Aarón Mendieta-Moctezuma, Edwin Javier Barrios-Gómez, Omar Romero-Arenas, Selma Ríos-Meléndez, Conrado Parraguirre-Lezama and Patricia Ibarra-Torres
Plants 2025, 14(21), 3249; https://doi.org/10.3390/plants14213249 - 23 Oct 2025
Viewed by 584
Abstract
This study evaluated the efficacy of essential oils (EOs) for the postharvest management of anthracnose caused by Colletotrichum gloeosporioides in mango. EOs from Cinnamon (Cinnamomum zeylanicum), Oregano (Origanum vulgare), Rosemary (Salvia rosmarinus), and Black pepper (Piper [...] Read more.
This study evaluated the efficacy of essential oils (EOs) for the postharvest management of anthracnose caused by Colletotrichum gloeosporioides in mango. EOs from Cinnamon (Cinnamomum zeylanicum), Oregano (Origanum vulgare), Rosemary (Salvia rosmarinus), and Black pepper (Piper nigrum) were chemically characterized using gas chromatography–mass spectrometry (GC–MS). The main compounds identified included eugenol, methyl eugenol, carvacrol, and eucalyptol, all recognized for their antifungal and antioxidant properties. In vitro assays showed that cinnamon and black pepper EOs significantly inhibited mycelial growth of C. gloeosporioides at all tested concentrations, whereas rosemary EO exhibited lower efficacy. In vivo experiments confirmed that all tested EOs significantly reduced disease severity in mango fruits compared to the control. Overall, the antifungal activity of EOs was dose-dependent and strongly influenced by their chemical complexity and synergistic interactions among major and minor components. These findings highlight the relevance of oxygenated monoterpenes, hydrocarbon monoterpenes, and sesquiterpenes as candidate groups for developing sustainable alternatives for the control of C. gloeosporioides in mango production. Full article
(This article belongs to the Special Issue Emerging Topics in Botanical Biopesticides—2nd Edition)
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19 pages, 2380 KB  
Article
Data-Driven FTIR Spectroscopy for the Discrimination of Nectars
by Aleksandra Szaniawska, Justyna Grzeda, Johannes Binder, Andrzej Kudelski, Kamilla Malek, Tomasz P. Wrobel, Andrzej Wysmolek and Katarzyna Roguz
Molecules 2025, 30(20), 4083; https://doi.org/10.3390/molecules30204083 - 14 Oct 2025
Viewed by 396
Abstract
Nectar composition varies across plant species and environments, influencing pollinator interactions and honey quality. Reliable methods for nectar discrimination, however, remain limited. Here, we demonstrate the use of Fourier-transform infrared (FTIR) spectroscopy combined with chemometric analysis to differentiate nectar samples of Echium vulgare [...] Read more.
Nectar composition varies across plant species and environments, influencing pollinator interactions and honey quality. Reliable methods for nectar discrimination, however, remain limited. Here, we demonstrate the use of Fourier-transform infrared (FTIR) spectroscopy combined with chemometric analysis to differentiate nectar samples of Echium vulgare (E. vulgare) and Hedera helix (H. helix) collected in urban locations. Among eight tested preprocessing strategies, simple approaches such as Savitzky–Golay smoothing or even raw spectra provided the best clustering results. The most discriminative spectral regions were consistently the carbohydrate fingerprint (1200–950 cm−1) and the C–H stretching zone (2935–2885 cm−1). Mean spectra and PCA confirmed that variability between locations arises mainly from carbohydrate-associated bands, while solvent type, biological matrix, and environmental exposure also affect spectral fingerprints. These results highlight FTIR spectroscopy as a rapid, non-destructive, and robust method for nectar discrimination, with potential applications in food authentication, ecological research, and pollinator–plant studies. Full article
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16 pages, 898 KB  
Article
Allelopathic Effects of Artemisia thuscula and Plocama pendula on the Invasive Plant Cenchrus setaceus and Crops
by Ana Fuvel, Andreea Cosoveanu, Jorge Sopena Lasala, José Ramón Arévalo and Raimundo Cabrera
Plants 2025, 14(20), 3159; https://doi.org/10.3390/plants14203159 - 14 Oct 2025
Viewed by 486
Abstract
Cenchrus setaceus is an alien invasive species with significant ecological impact on both natural ecosystems and agricultural areas across the Canary Islands. In this study, we evaluated the allelopathic effects of foliar lixiviates from two endemic species, Artemisia thuscula and Plocama pendula, [...] Read more.
Cenchrus setaceus is an alien invasive species with significant ecological impact on both natural ecosystems and agricultural areas across the Canary Islands. In this study, we evaluated the allelopathic effects of foliar lixiviates from two endemic species, Artemisia thuscula and Plocama pendula, on Cenchrus setaceus and a group of crop species to assess (i) germination inhibition of the invasive species and (ii) selectivity towards non-target crops. A preliminary trial tested undiluted and diluted forms (1%, 10%) of concentrated lixiviates prepared at a 1:3 (w:v) leaf-to-water ratio, using C. setaceus and Lactuca sativa under growth chamber conditions. In the validation trial, lixiviates prepared at a 1:6 (w:v) ratio were applied directly to C. setaceus and seven crops (Zea mays, Allium cepa, Hordeum vulgare, L. sativa, Solanum lycopersicum, Brassica oleracea, and Raphanus sativus) under both growth chamber and greenhouse conditions. Germination indices were calculated across assays, and plumule and radicle lengths were measured in growth chamber assays. In both trials, C. setaceus germination was inhibited by up to 60% by both ratios of lixiviates (Dunn p < 0.05), with reduced speed and seedling growth (plumule: −37.5%; radicle: −85%). Crop sensitivity varied: A. cepa and H. vulgare showed no significant inhibition; B. oleracea and R. sativus were affected by P. pendula (germination reduced 2.5–2.7×); and Z. mays, L. sativa, and S. lycopersicum exhibited delayed germination and reduced seedling growth under both treatments. These results support the selective use of native plant lixiviates for integrated management of Cenchrus setaceus in sensitive agroecosystems. Full article
(This article belongs to the Section Plant Ecology)
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19 pages, 1751 KB  
Article
Dillapiole Dampens the Expression of the Major Virulence Genes of Francisella tularensis
by Elliot M. Collins, Anthony Sako, Kristen Sikorsky, James Denvir, Jun Fan, Donald A. Primerano, Deanna M. Schmitt, Stuart Cantlay, Roger Seeber, Francisco León and Joseph Horzempa
Molecules 2025, 30(19), 3995; https://doi.org/10.3390/molecules30193995 - 6 Oct 2025
Viewed by 425
Abstract
Francisella tularensis is a pathogenic bacterium and the causative agent of the disease tularemia. Because of the virulence of this bacterium and the potential for weaponization, the Centers for Disease Control and Prevention (CDC) has classified F. tularensis as a Category A Bioterrorism [...] Read more.
Francisella tularensis is a pathogenic bacterium and the causative agent of the disease tularemia. Because of the virulence of this bacterium and the potential for weaponization, the Centers for Disease Control and Prevention (CDC) has classified F. tularensis as a Category A Bioterrorism Agent. Therefore, the need for new treatments for tularemia is critical. In this work, we screened a cataloged library of natural extracts to identify those that inhibit the growth of F. tularensis only during infection of THP-1 monocyte cells. One of the most promising extracts identified in this screen was derived from Foeniculum vulgare (fennel). Using bioassay-guided fractionation, the fennel extract was fractionated, and the bioactive compound was isolated and structurally elucidated as the phenylpropanoid dillapiole. We subsequently confirmed that dillapiole alone could limit the replication of F. tularensis in infected THP-1 cells, but not outside of this infection model. Investigations on host responses suggested that dillapiole was not substantially augmenting the immunity of these THP-1 cells. We then investigated the potential virulence modulation activity of dillapiole. To test this hypothesis, RNA-seq analysis was carried out on F. tularensis bacteria that were treated with dillapiole. This showed that dillapiole caused a significant downregulation of genes controlled by the transcriptional regulators MglA and SspA, including those encoded in the Francisella pathogenicity island. Western blotting validated these findings as both IglA and IglC expression was diminished in F. tularensis LVS bacteria treated with dillapiole. Because dillapiole dampens the virulence gene expression of F. tularensis, we concluded that this compound has potential to be used as a novel therapeutic for tularemia with a unique mechanism of action. Full article
(This article belongs to the Special Issue Discovery of Antibacterial Drugs)
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18 pages, 1469 KB  
Article
Olive Pomace-Derived Compost: Phytotoxicity Assessment and Relevance for Soil Systems
by Qaiser Javed, Mohammed Bouhadi, Igor Palčić, Dominik Anđelini, Danko Cvitan, Nikola Major, Marina Lukić, Smiljana Goreta Ban, Dean Ban, David Heath, Tomaž Rijavec, Aleš Lapanje and Marko Černe
Soil Syst. 2025, 9(4), 107; https://doi.org/10.3390/soilsystems9040107 - 30 Sep 2025
Viewed by 736
Abstract
Olive pomace (OP) contains phytotoxic compounds that can impair plant growth and soil quality. Composting provides an effective method for detoxifying olive pomace (OP) and improving its suitability for agricultural use. Therefore, this study investigated the phytotoxic effects of raw olive pomace filtrate [...] Read more.
Olive pomace (OP) contains phytotoxic compounds that can impair plant growth and soil quality. Composting provides an effective method for detoxifying olive pomace (OP) and improving its suitability for agricultural use. Therefore, this study investigated the phytotoxic effects of raw olive pomace filtrate (OPF) on seed germination in radish (Raphanus sativus L.) and barley (Hordeum vulgare L.), as well as the impact of composted olive pomace (COP) on their growth. Seeds were exposed to OPF at concentrations of 0% (control), 1%, 3%, 5%, 10%, 20%, and 100%. Additionally, three composting treatments were evaluated: R1 (control: OP + barley straw), R2 (OP + barley straw + urea), and R3 (OP + barley straw + sheep litter). Results showed that OPF at concentrations of 10%, 20%, and 100% significantly reduced seed germination, with complete inhibition at concentrations > 10%. The COP treatments showed different physicochemical properties, such as R2 exhibiting better nutrient availability (C/N = 19, oil content = 0.04%). R3 had the highest concentrations of K (40,430.2 mg/kg) and P (6022.68 mg/kg). Results also indicated that R1 significantly reduced radish dry biomass production compared to barley, although R2 performed slightly better than R1 and R3. The findings highlight the need for proper compost stabilization to minimize the phytotoxicity and improve the agricultural potential of COP for improving soil health. Full article
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20 pages, 1482 KB  
Article
Bioactive Potential of Wild Plants from Gardunha Mountain: Phytochemical Characterization and Biological Activities
by Alexandra Coimbra, Eugenia Gallardo, Ângelo Luís, Pedro Dinis Gaspar, Susana Ferreira and Ana Paula Duarte
Molecules 2025, 30(19), 3876; https://doi.org/10.3390/molecules30193876 - 25 Sep 2025
Viewed by 777
Abstract
The plants used in folk medicine have been increasingly studied to identify their bioactive properties. Therefore, this study aimed to assess the bioactivity of the hydroethanolic extracts of plants collected in Gardunha Mountain, Portugal. Seven abundant and representative wild plants were studied: Cistus [...] Read more.
The plants used in folk medicine have been increasingly studied to identify their bioactive properties. Therefore, this study aimed to assess the bioactivity of the hydroethanolic extracts of plants collected in Gardunha Mountain, Portugal. Seven abundant and representative wild plants were studied: Cistus salviifolius, Clinopodium vulgare, Coincya monensis, Glandora prostrata, Helichrysum stoechas, Rubia peregrina, and Umbilicus rupestris. The phytochemical composition of the extracts was determined by UHPLC-timsTOF-MS and by spectrophotometric methods. The antioxidant, in vitro anti-inflammatory and antimicrobial activity and the biocompatibility of the extracts were tested. The extracts were predominantly composed of flavonoids and phenolic acids, such as gallic acid, neochlorogenic acid and quercetin glycosides. The C. salviifolius extracts demonstrated very strong antioxidant activity related to scavenging free radicals (AAI = 2.84 and 2.93). Regarding antimicrobial activity, the H. stoechas extract exhibited inhibitory effects, particularly against Gram-positive bacteria and yeasts (MIC = 0.008–0.5 mg/mL). The C. monensis, R. peregrina, and U. rupestris extracts showed low cytotoxicity (viability > 70%) in the highest concentration tested. These findings highlight C. salviifolius and H. stoechas as promising sources of novel bioactive compounds, particularly antimicrobials in controlling microbial growth and promoting associated health benefits, and underscore the value of traditional medicinal plants as a guide for pharmacological studies. Full article
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18 pages, 1741 KB  
Article
High Dose of Nickel Unbalances Carbon Metabolism and Nitrogen Assimilation in Barley (Hordeum vulgare L.)
by Alessia De Lillo, Ivana De Rosa, Giorgia Capasso, Giorgia Santini, Concetta Di Napoli, Noemi Russo, Ermenegilda Vitale, Stefania Grillo, Sergio Esposito and Simone Landi
Plants 2025, 14(18), 2927; https://doi.org/10.3390/plants14182927 - 20 Sep 2025
Viewed by 460
Abstract
Pollution from heavy metals represents one of the most important threats to crops. Among these, Nickel (Ni) represents a dangerous element, strictly related to anthropic activity and easily accumulated in plants. In this study, effects of high levels (1 mM) of Ni2+ [...] Read more.
Pollution from heavy metals represents one of the most important threats to crops. Among these, Nickel (Ni) represents a dangerous element, strictly related to anthropic activity and easily accumulated in plants. In this study, effects of high levels (1 mM) of Ni2+ were investigated in barley (Hordeum vulgare L. cv. Nure) grown hydroponically, inducing a severe reduction in plant growth, as well as genotoxic damage. Moreover, stress affects photosynthesis, inducing a decrease in Fv/Fm and ΦPSII and an increase in D1 protein and RuBisCO (RbcL) abundance to compensate for the loss of photosynthetic efficiency. Changes were observed in carbon metabolism, with increases in phosphofructokinase, glyceraldehyde-3P dehydrogenase-NAD+, and pyruvate kinase expression confirmed by increased proteins and activities. Notably, there was an evident rise in PEP carboxylase activity, presence, and expression. This increase boosts the TCA cycle (increased fumarase) and supports photorespiration. Evident rises were observed also for glucose-6P dehydrogenase activity and presence. Ni2+ stress induced an evident increase in enzymes involved in nitrogen metabolism: particularly, the chloroplastic GS2/Fd-GOGAT cycle and N assimilation through the cytosolic glutamate dehydrogenase reaction were enhanced. These results design a specific stress-responsive metabolism by diverting the synthesis of N-compounds through alternative C/N assimilation pathways to counteract the effects of Ni2+ toxicity. This study depicts a diversion of the main C/N metabolism network towards an increase in leaf N assimilation, using carbon skeletons from dark CO2 fixation under high Ni2+ stress. These results may provide possible targets for the improvement of heavy metal tolerance in cereals. Full article
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16 pages, 7943 KB  
Article
Characterization of Hydrogel Beads for the Gradual Release of Origanum vulgare L. Essential Oil and Evaluation of Their Antifungal Activity Against Candida albicans
by Victoria Concha, Mario Díaz-Dosque, Luisa Fernanda Duarte, José A. Jara and Alfredo Molina-Berríos
Microorganisms 2025, 13(9), 2065; https://doi.org/10.3390/microorganisms13092065 - 5 Sep 2025
Viewed by 845
Abstract
Candida albicans infections are associated with high morbidity and mortality worldwide. Current antifungal therapies are limited by adverse effects and the emergence of resistant strains, which compromise long-term efficacy. Previous studies have shown that Origanum vulgare L. essential oil (OvEO) possesses strong antifungal [...] Read more.
Candida albicans infections are associated with high morbidity and mortality worldwide. Current antifungal therapies are limited by adverse effects and the emergence of resistant strains, which compromise long-term efficacy. Previous studies have shown that Origanum vulgare L. essential oil (OvEO) possesses strong antifungal activity; however, its volatility and physicochemical instability hinder clinical application. The aim of this study was to encapsulate OvEO in a hydrogel and evaluate its release kinetics, chemical composition, structural properties, and antifungal activity. We assessed its release kinetics, chemical composition, structural characteristics (FTIR; SEM), and antifungal activity against C. albicans. OvEO was successfully encapsulated into hydrogel beads, enabling a gradual release profile, with in vitro release of phenolic compounds reaching 100% at 48 min. SEM revealed an irregular surface with small pores and crystalline aggregates distributed across the bead surface. OvEO-loaded hydrogel beads inhibited C. albicans growth with an IC50 of 0.15 ± 0.05 mg/L for strain 90029 and 0.2 ± 0.06 mg/L for strain 10231. At these concentrations, adhesion to abiotic surfaces was reduced by 60–80%. These findings support the potential of OvEO-loaded hydrogel beads as an alternative approach for the treatment of fungal infections, offering a complementary strategy to current antifungal agents. Full article
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14 pages, 571 KB  
Article
Phytochemical and Insecticidal Activity of Some Thyme Plants’ Essential Oils Against Cryptoblabes gnidiella and Scirtothrips mangiferae on Mango Inflorescences
by Mohammad M. Aljameeli, Nawal Abdulaziz Alfuhaid, Ahmed Ramadan El-Rokh, Samira A. El-Salam, May A. Elhefni, Amira S. El-Rahman, Esraa M. Hussein, Jazem A. Mahyoub, Hayam Elshazly, Hanan S. Alyahya, Shatha I. Alqurashi, Mohamed A. Abdein, EL-Sayed M. Qaoud and Marwa M. Mosallam
Insects 2025, 16(9), 922; https://doi.org/10.3390/insects16090922 - 2 Sep 2025
Viewed by 896
Abstract
Mango fruits are one of the strategic fruit crops in different countries that are attacked by several serious pests such as Cryptoblabes gnidiella and Scirtothrips mangiferae. Natural extracts, especially essential oils, provide several promising insecticide agents to control different insects as an [...] Read more.
Mango fruits are one of the strategic fruit crops in different countries that are attacked by several serious pests such as Cryptoblabes gnidiella and Scirtothrips mangiferae. Natural extracts, especially essential oils, provide several promising insecticide agents to control different insects as an alternative to synthetic insecticides. Using Clevenger-type hydrodistillation, the essential oils of five thyme plants—Thymus vulgaris, Origanum vulgare, Thymus argenteus, Thymus citriodorus, and Origanum syriacum—from Saudi Arabia and Egypt were extracted, and GC/MS analysis was performed. In addition, some chemical parameters of the five species were determined, such as chlorophyll a, chlorophyll b, β-carotene, total antioxidant capacity, total phenols, and total flavonoids. Two compounds, thymol and carvacrol, were identified in T. vulgaris and O. vulgare at ratios of 69.45 and 64.82%, respectively. These major compounds were isolated and identified using 1H NMR analysis. The insecticidal potentials of the five essential oils and their pure isolated compounds were evaluated on C. gnidiella and S. mangiferae on mango inflorescences. The results showed that T. vulgaris and O. vulgare oils were the most potent against C. gnidiella (LC50, 183.33 and 164.68 ppm, respectively) and S. mangiferae (18.93 and 16.93 ppm, respectively). Thymol and carvacrol had the highest effect on both insects. Furthermore, the effect of thymol and carvacrol at LC50 values on some biochemical parameters of C. gnidiella was determined. Therefore, thymol and carvacrol from Thymus species are promising compounds that could be used as insecticides against the harmful insects C. gnidiella and S. mangiferae on mango inflorescences. Full article
(This article belongs to the Special Issue Advanced Pest Control Strategies of Fruit Crops)
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17 pages, 3914 KB  
Article
Green Synthesis of Chitosan-Coated Selenium Nanoparticles for Paclitaxel Delivery
by Mouhaned Y. Al-Darwesh, Maroua Manai, Hammouda Chebbi and Axel Klein
Nanomaterials 2025, 15(16), 1276; https://doi.org/10.3390/nano15161276 - 18 Aug 2025
Cited by 2 | Viewed by 1068
Abstract
Selenium nanoparticles (Se NPs) were synthesized from Na2SeO3 using Foeniculum vulgare (fennel) seed extract as mild sustainable reductant, coated with chitosan (Ch), and loaded with Paclitaxel (PTX). The PTX release from the Se@Ch–PTX NPs and their cytotoxicity against MDA-MB-231 breast [...] Read more.
Selenium nanoparticles (Se NPs) were synthesized from Na2SeO3 using Foeniculum vulgare (fennel) seed extract as mild sustainable reductant, coated with chitosan (Ch), and loaded with Paclitaxel (PTX). The PTX release from the Se@Ch–PTX NPs and their cytotoxicity against MDA-MB-231 breast cancer cells was studied in view of an application as drug delivery platform. Thermogravimetric analysis (TGA) showed the thermal stability of the NPs up to 300 °C. UV–vis absorption and Fourier transform IR (FT-IR) spectroscopy allowed to trace surface species originating from the F. vulgare extract on the Se NPs, while the surface of the Se@Ch–PTX NPs is characterized from Ch and PTX functionalities. Scanning electron microscopy (SEM) and transmission electron microscopy (TEM) showed approximate spherical shaped NPs with sizes ranging from 10 to 40 nm. Zeta potential measurements showed a clear distinction between the −39 mV found the Se NPs and +57 mV for the Ch–PTX coated NPs. The NPs showed good biocompatibility with red blood cells (RBCs) in hemolytic activity assays, exhibiting no hemolytic effects at concentrations ranging from 50 to 400 µg/mL. In vitro release studies showed a sustained and pH-responsive release pattern with a maximum release of about 80% within 22 h for Se@Ch–PTX at pH = 3.5. The Se@Ch–PTX NPs showed high antiproliferative activity against MDA-MB-231 cells with an IC50 value of 12.3 µg/mL compared to about 36 for PTX and 52 µg/mL for the Se NPs. The reactive oxygen species (ROS) activity as studied through DPPH scavenging showed higher values for the Se@Ch–PTX NPs compared to the Se NP. Full article
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17 pages, 1001 KB  
Article
A Preliminary Evaluation of the Use of Solid Residues from the Distillation of Medicinal and Aromatic Plants as Fertilizers in Mediterranean Soils
by Anastasia-Garyfallia Karagianni, Anastasia Paraschou and Theodora Matsi
Agronomy 2025, 15(8), 1903; https://doi.org/10.3390/agronomy15081903 - 7 Aug 2025
Viewed by 655
Abstract
The current study focuses on a preliminary evaluation of the use of solid residues produced from the distillation of selected medicinal and aromatic plants (MAP) as fertilizers for alkaline soils. Specifically, the residues of hemp (Cannabis sativa L.), helichrysum (Helichrysum Italicum [...] Read more.
The current study focuses on a preliminary evaluation of the use of solid residues produced from the distillation of selected medicinal and aromatic plants (MAP) as fertilizers for alkaline soils. Specifically, the residues of hemp (Cannabis sativa L.), helichrysum (Helichrysum Italicum (Roth) G. Don), lavender (Lavandula angustifolia Mill.), oregano (Origanum vulgare L.), rosemary (Rosmarinus officinalis L.) and sage (Salvia officinalis L.) were added in an alkaline and calcareous soil at the rates of 0 (control), 1, 2, 4 and 8%, in three replications (treatments), and the treated soils were analyzed. The results showed that upon application of the residues, soil electrical conductivity (EC), organic C, total N and the C/N ratio significantly increased, especially at the 4 and 8% rates. The same was found for soil available P, K, B, Cu and Mn. The effects of the residues on soil pH, cation exchange capacity (CEC) and available Zn and Fe were rather inconclusive, whereas soil available N significantly decreased, which was somewhat unexpected. From the different application rates tested, it seems that all residues could improve soil fertility (except N?) when they were applied to soil at rates of 2% and above, without exceeding the 8% rate. The reasons for the latter statement are soil EC and available Mn: the doubling of EC upon application of the residues and the excessive increase in soil available Mn in treatments with 8% residues raise concerns of soil salinization and Mn phytotoxicity risks, respectively. This work provides the first step towards the potential agronomic use of solid residues from MAP distillation in alkaline soils. However, for the establishment of such a perspective, further research is needed in respect to the effect of residues on plant growth and soil properties, by means of at least pot experiments. Based on the results of the current study, the undesirable effect of residues on soil available N should be investigated in depth, since N is the most important essential element for plant growth, and possible risks of micronutrient phytotoxicities should also be studied. In addition, application rates between 2 and 4% should be studied extensively in order to recommend optimum application rates of residues to producers. Full article
(This article belongs to the Section Soil and Plant Nutrition)
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17 pages, 16726 KB  
Article
Genome-Wide Identification, Characterization, and Comparison of C3HC4 Family Genes in Salt Tolerance Between Barley and Rice
by Kerun Chen, Shuai Wang, Xiaohan Xu, Xintong Zheng, Hongkai Wu, Linzhou Huang, Liping Dai, Chenfang Zhan, Dali Zeng and Liangbo Fu
Plants 2025, 14(15), 2404; https://doi.org/10.3390/plants14152404 - 3 Aug 2025
Viewed by 670
Abstract
Soil salinization constitutes a major constraint on global agricultural production, with marked divergence in salt adaptation strategies between salt-tolerant barley (Hordeum vulgare) and salt-sensitive rice (Oryza sativa). This study systematically investigated the evolution and functional specialization of the C3HC4-type [...] Read more.
Soil salinization constitutes a major constraint on global agricultural production, with marked divergence in salt adaptation strategies between salt-tolerant barley (Hordeum vulgare) and salt-sensitive rice (Oryza sativa). This study systematically investigated the evolution and functional specialization of the C3HC4-type RING zinc finger gene family, known to mediate abiotic stress responses through E3 ubiquitin ligase activity, in these contrasting cereal species. Through comparative genomics, we identified 123 HvC3HC4 genes and 90 OsC3HC4 genes, phylogenetically classified into four conserved subgroups. Differences in C3HC4 genes in phylogenetic relationships, chromosomal distribution, gene structure, motif composition, gene duplication events, and cis-elements in the promoter region were observed between barley and rice. Moreover, HvC3HC4s in barley tissues preferentially adopted an energy-conserving strategy, which may be a key mechanism for barley’s higher salt tolerance. Additionally, we found that C3HC4 genes were evolutionarily conserved in salt-tolerant species. The current results reveal striking differences in salt tolerance between barley and rice mediated by the C3HC4 gene family and offer valuable insight for potential genetic engineering applications in improving crop resilience to salinity stress. Full article
(This article belongs to the Special Issue Cell Physiology and Stress Adaptation of Crops)
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20 pages, 10909 KB  
Article
Preparation Optimization and Antioxidant Properties of the β-Glucan and Ferulic Acid/Quercetin Complex from Highland Barley (Hordeum vulgare var. nudum)
by Yuanhang Ren, Yanting Yang, Mi Jiang, Wentao Gu, Yanan Cao, Liang Zou and Lianxin Peng
Foods 2025, 14(15), 2712; https://doi.org/10.3390/foods14152712 - 1 Aug 2025
Viewed by 640
Abstract
Polysaccharides and phenols are commonly co-localized in various plant-derived foods, including highland barley (Hordeum vulgare L. var. nudum Hook. f.). The interactions between these compounds can influence multiple characteristics of food products, including their physicochemical properties and functional performance, such as bioavailability, [...] Read more.
Polysaccharides and phenols are commonly co-localized in various plant-derived foods, including highland barley (Hordeum vulgare L. var. nudum Hook. f.). The interactions between these compounds can influence multiple characteristics of food products, including their physicochemical properties and functional performance, such as bioavailability, stability, and digestibility, which may support promising application of the phenol and polysaccharide complex in health food industry. In this study, two complexes with potential existence in highland barley, such as β-glucan-ferulic acid (GF) and β-glucan-quercetin (GQ), were prepared using the equilibrium dialysis method in vitro. FTIR and SEM results showed that ferulic acid and quercetin formed complexes with β-glucan separately, with covalent and non-covalent bonds and a dense morphological structure. The pH value, reaction temperature, and concentration of phosphate buffer solution (PBS) were confirmed to have an impact on the formation and yield of the complex. Through the test of the response surface, it was found that the optimum conditions for GF and (GQ) preparations were a pH of 6.5 (6), a PBS buffer concentration of 0.08 mol/L (0.3 mol/L), and a temperature of 8 °C (20 °C). Through in vitro assays, GF and GQ were found to possess good antioxidant activity, with a greater scavenging effect of DPPH, ABTS, and hydroxyl radical than the individual phenolic acids and glucans, as well as their physical mixtures. Taking GF as an example, the DPPH radical scavenging capacity ranked as GF (71.74%) > ferulic acid (49.50%) > PGF (44.43%) > β-glucan (43.84%). Similar trends were observed for ABTS radical scavenging (GF: 54.56%; ferulic acid: 44.37%; PGF: 44.95%; β-glucan: 36.42%) and hydroxyl radical elimination (GF: 39.16%; ferulic acid: 33.06%; PGF: 35.51%; β-glucan: 35.47%). In conclusion, the convenient preparation method and excellent antioxidant effect of the phenol–polysaccharide complexes from highland barley provide new opportunities for industrial-scale production, development, and design of healthy food based on these complexes. Full article
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29 pages, 10502 KB  
Article
A Comparative Bioinformatic Investigation of the Rubisco Small Subunit Gene Family in True Grasses Reveals Novel Targets for Enhanced Photosynthetic Efficiency
by Brittany Clare Thornbury, Tianhua He, Yong Jia and Chengdao Li
Int. J. Mol. Sci. 2025, 26(15), 7424; https://doi.org/10.3390/ijms26157424 - 1 Aug 2025
Viewed by 911
Abstract
Ribulose bisphosphate carboxylase (RuBisCO) is the primary regulator of carbon fixation in the plant kingdom. Although the large subunit (RBCL) is the site of catalysis, RuBisCO efficiency is also influenced by the sequence divergence of the small subunit (RBCS). This project compared the [...] Read more.
Ribulose bisphosphate carboxylase (RuBisCO) is the primary regulator of carbon fixation in the plant kingdom. Although the large subunit (RBCL) is the site of catalysis, RuBisCO efficiency is also influenced by the sequence divergence of the small subunit (RBCS). This project compared the RBCS gene family in C3 and C4 grasses to identify genetic targets for improved crop photosynthesis. Triticeae/Aveneae phylogeny groups exhibited a syntenic tandem duplication array averaging 326.1 Kbp on ancestral chromosomes 2 and 3, with additional copies on other chromosomes. Promoter analysis revealed a paired I-box element promoter arrangement in chromosome 5 RBCS of H. vulgare, S. cereale, and A. tauschii. The I-box pair was associated with significantly enhanced expression, suggesting functional adaptation of specific RBCS gene copies in Triticaeae. H. vulgare-derived pan-transcriptome data showed that RBCS expression was 50.32% and 28.44% higher in winter-type accessions compared to spring types for coleoptile (p < 0.05) and shoot, respectively (p < 0.01). Molecular dynamics simulations of a mutant H. vulgare Rubisco carrying a C4-like amino acid substitution (G59C) in RBCS significantly enhanced the stability of the Rubisco complex. Given the known structural efficiency of C4 Rubisco complexes, G59C could serve as an engineering target for enhanced RBCS in economically crucial crop species which, in comparison, possess less efficient Rubisco complexes. Full article
(This article belongs to the Special Issue Molecular Genetics, Genomics and Breeding in Field Crops)
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Article
Salivary pH Modulation and Antimicrobial Properties of Oregano-Oil Jelly in Relation to Menstrual and Menopausal Status
by Georgiana Ioana Potra Cicalău, Gabriela Ciavoi, Ioana Scrobota, Ionut Daniel Venter, Madalin Florin Ganea, Marc Cristian Ghitea, Evelin Claudia Ghitea, Maria Flavia Gîtea, Timea Claudia Ghitea, Csaba Nagy, Diana Constanta Pelea, Luciana Dobjanschi, Octavia Gligor, Corina Moisa and Mariana Ganea
Nutrients 2025, 17(15), 2480; https://doi.org/10.3390/nu17152480 - 29 Jul 2025
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Abstract
Background: Salivary pH plays a critical role in oral health by influencing enamel demineralization, buffering capacity, and the ecology of oral microbiota. Essential oils such as Origanum vulgare (oregano) possess well-documented antimicrobial properties that may reduce acidogenic bacterial activity. However, the effects of [...] Read more.
Background: Salivary pH plays a critical role in oral health by influencing enamel demineralization, buffering capacity, and the ecology of oral microbiota. Essential oils such as Origanum vulgare (oregano) possess well-documented antimicrobial properties that may reduce acidogenic bacterial activity. However, the effects of edible delivery systems like jellies on salivary pH modulation and their potential interactions with hormonal states remain poorly understood. Methods: This study evaluated the in vitro antimicrobial activity of an oregano-oil-based jelly formulation against standard bacterial (Staphylococcus aureus, Streptococcus pyogenes, and Escherichia coli) and fungal (Candida albicans) strains using the Kirby–Bauer disc diffusion method. Additionally, a human trial (n = 91) measured salivary pH before and after administration of the oregano-oil jelly. Participants were characterized by age, smoking status, menopausal status, and presence of menstruation. Multiple linear regression was used to identify predictors of final salivary pH. Results: The oregano-oil jelly demonstrated strong in vitro antimicrobial activity, with inhibition zones up to 8 mm for E. coli and C. albicans. In vivo, mean unstimulated salivary pH increased from 6.94 to 7.07 overall, indicating a mild alkalinizing effect. However, menstruating participants showed a significant decrease in final pH (from 7.03 to 6.78). Multiple regression identified menstruation as a significant negative predictor (β = −0.377, p < 0.001) and initial pH as a positive predictor (β = +0.275, p = 0.002). Menopausal status was not a significant predictor, likely due to the small sample size. Conclusions: Oregano-oil jellies may represent a promising natural approach to support oral health by increasing salivary pH and providing strong antimicrobial activity. However, physiological states such as menstruation can significantly modulate this response, underscoring the importance of personalized or phase-aware oral care strategies. Further studies with larger, diverse cohorts and controlled hormonal assessments are needed to validate these findings and optimize product formulations. Full article
(This article belongs to the Section Nutrition and Metabolism)
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