Search Results (34)

Rodents are the main wildlife species in the Dongting Lake area and can even cause significant biological disasters. In order to investigate the relationship between rodent communities and vegetation, the relationship between rodent population characteristics and vegetation cover between 2000 and 2020 was analyzed. The results showed that the rodent community in Dongting Lake has obvious spatial and temporal variability, and that Microtus fortis and Apodemus agrarius are currently the main rodent species in the area, with a higher population density in eastern Dongting Lake. Meanwhile, rodent fatness varied significantly between seasons, with the highest rodent fatness in winter at most survey sites. There was also significant spatial and temporal variability in vegetation cover, and the overall trend was increasing. There was a significant relationship between vegetation cover and rodent population density and fatness, and the relationship varied by rodent species. Microtus fortis population density was significantly correlated with medium to high levels of vegetation cover, but fatness was significantly correlated with low to medium levels of vegetation cover. The relationship between population density, fatness, and vegetation cover of A. agrarius is opposite to that of M. fortis. The study confirms that M. fortis is still the main pest rodent species in the Dongting Lake area, but the monitoring of A. agrarius and vegetation cover should be strengthened. Full article

Highly pathogenic henipaviruses (Nipah and Hendra viruses) and parahenipaviruses (Langya virus) have demonstrated significant zoonotic potential. We aimed to identify Henipavirus or Parahenipavirus species in rodents and shrews in South Korea to underline the potential zoonotic transmission risk. Kidney and lung tissues from 285 rodents and shrews were screened for Henipavirus and Parahenipavirus using quantitative real-time reverse transcription polymerase chain reaction (qRT-PCR) targeting the Gamak virus and Daeryong virus (DARV) sequences. Based on the qRT-PCR results, 75 out of the 285 individuals tested positive, with the highest viral loads in the kidneys of Apodemus agrarius, Crocidura lasiura, and Crocidura shantungensis. A kidney sample from C. shantungensis that exhibited the lowest Ct value was further analyzed using PCR, Sanger sequencing, and metagenomic analysis, yielding a near-complete genome of a novel Parahenipavirus, designated Parahenipavirus_GH (PHNV-GH), which is phylogenetically related to DARV and Jingmen virus but exhibits distinct genomic features. Ixodes granulatus ticks were also identified on the host shrew. The identification of PHNV-GH in southern South Korea expands the known geographical distribution range of parahenipaviruses and highlights the ongoing risk of zoonotic transmission. Given the uncertain transmission dynamics and pathogenic potential of parahenipaviruses, comprehensive environmental surveillance and characterization of emerging parahenipaviruses are essential for preventing future outbreaks. Full article

Rodent body size often exhibits a diversity of temperature–size patterns among and within species, which might be caused by differential thermoneutral zones (TNZs) and experienced extents of warming. Here, we test this hypothesis in populations of Apodemus agrarius. To study how body size varies across space, we analysed data on body size and temperature (specifically, annual mean minimum temperature) from nine sites spanning 1150 m of elevation. Using indirect calorimetry, we also measured the resting metabolic rate at different temperatures to infer the population-specific TNZ. To study how body size changes over time (2013–2020), we analysed body-size data of southern and northern populations from warm and cold sites, respectively. With increasing temperatures across space, body size increased and the TNZ narrowed. Moreover, during the eight years, temperature remained stable at the warm site but rose at the cold site. As a result, body size increased in the population at the cold site but remained stable in the population at the warm site. Finally, the rate of change in body size per 1 °C change in temperature was larger along the temporal than the spatial temperature gradient. Together, these results support our hypothesis that, among rodent populations, differential changes in body size can be caused by site-specific habitat warming and the population-specific TNZ. A population with a narrow TNZ can be restricted in its body-size response to habitat warming. Full article

Terrestrial small mammal species typically assemble according to plant communities, but multiple factors, including large-scale geographic patterns, influence their assemblage structure. Despite their ecological significance, small mammals are often underrepresented in biodiversity assessments, and many Polish national parks lack comprehensive surveys. This is also the case for Wolin National Park (WNP), Poland’s only national park on a coastal marine island, which is known for its unique bat fauna. Here, we surveyed small mammals in WNP using live and pitfall trapping, identifying only nine species—the lowest richness among the five regional national parks (which host 11–13 species based on trapping data alone). Rarefaction analysis indicated a very low probability of detecting additional species with further sampling. This unexpectedly low richness is likely linked to insular isolation and the park’s location at the edge of the regional distributions of three species. Cluster analysis revealed a key pattern in WNP’s small mammal assemblages: a division between two distinct landscape units—moraine hills and the alluvial delta—where Apodemus flavicollis and Apodemus agrarius were the predominant species, respectively. This division had a greater influence on assemblage clustering than local vegetation. Full article

We examined the morphological variation in the striped field mouse (Apodemus agrarius) along south–north and west–east geographic gradients in Europe (Slovakia, Lithuania, and Estonia). Data collected over several decades (1980s–2020s) were analyzed, focusing on five traits: body mass, body length, tail length, hind foot length, and ear length, with GLM models assessing the influence of latitude, longitude, age, sex, and decade. Results revealed strong adherence to ecogeographic rules. Findings suggest that body size increased toward the north, following Bergmann’s rule, which links larger size to better heat conservation in colder climates. Conversely, appendage sizes (e.g., tail, ear) decreased, aligning with Allen’s rule to minimize heat loss. Longitudinal gradients revealed reductions in body length and appendages toward the east, potentially reflecting climatic and habitat variability. Temporal trends highlighted dynamic changes in body size, with increases in Slovakia and mixed trends in Lithuania and Estonia. Sex-based dimorphism varied by country and decade, with females often heavier and males displaying longer appendages. The findings underscore the influence of geographic and temporal factors on morphological variation, providing critical insights into the adaptability of A. agrarius. These results contribute to understanding species’ ecological plasticity and evolutionary responses. Full article

While urbanization leads to habitat loss for medium and large mammals, small mammals can survive in fragmented habitats. As they are known to be the primary hosts of chigger mites (Acari: Trombiculidae) that transmit scrub typhus, their habitat can be considered the primary distribution area for chigger mites. This study aims to examine the distribution of small mammals and chigger mites in four habitat types and analyzed species richness, mean intensity (MI), dominance, and infestation rate (IR). A total of six small mammal species were captured, 76.8% of which were identified as Apodemus agrarius. Species richness of small mammals was highest in forests, followed by ecotones, grasslands, and agricultural lands. Apodemus agrarius accounted for 61% of the captures in forests, 80% in ecotones, 84% in grasslands, and 50% in agricultural lands, highlighting its varying dominance across habitat types. The MI of chigger mites was higher in grasslands (215.41 ± 20.70) and ecotones (171.67 ± 30.33) and lower in forests (76.67 ± 32.11). The MI of chigger mites was higher in the fall than that in the spring, and according to the MaxEnt model, they had a narrow, dense distribution in the fall and a wide distribution in the spring. These results suggest that inducing increased species richness of small mammalian hosts by habitat management and vegetation diversification may contribute to a reduction in the MI of chigger mites. Full article

The striped field mouse (Apodemus agrarius) is expanding in several European countries, but the details of this process are not always documented due to a lack of long-term studies. We conducted an analysis of changes in relative abundances and proportions of A. agrarius in small mammal communities in nine different habitat groups in Lithuania during 1975–2023. We found an increase in the abundance and proportion of A. agrarius, increasing synanthropization of the species, and tolerance to anthropogenization of habitats. Temporal variations in the relative abundance and proportion of species were observed, with lower values in February–July and higher values in September–January. The main finding is a remarkable increase in species presence in the country after the 1990s, with a peak observed in the 2010s–2020s, confirmed by eight local studies. During these decades, it was the third most abundant species, representing 19.8–20.0% of the individuals caught. It is also important to note that A. agrarius has recently been most abundant in commensal habitats (0.029 ± 0.006 individuals/trap day), with the highest species proportion in agricultural areas (24.8 ± 1.8%). There are many indications that the expansion of A. agrarius in Lithuania is becoming invasive. Full article

Habitat structure on foraging ground is one of the crucial factors determining diet diversity in colonially breeding avian predators. Quantifying the habitat and diet composition at different spatial scales (regional and local inter-colonial) can help provide understanding of the drivers of diet composition. In this study, we examined the composition of the non-fish diet of an opportunistic predator, the Grey Heron (Ardea cinerea), based on pellets. We compared pellets from 21 colonies in two different regions of Poland that differing in composition of foraging habitats. Multivariate statistical techniques were used to analyze the relationship between diet and habitat compositions in a 20 km radius around these colonies. Significant inter-regional and inter-colony differences in Grey Heron diet and habitat composition were detected in foraging areas. However, some prey were present in the diet only from one of the regions. Around the heronries with a predominance of farmland habitats, the European water vole (Arvicola amphibius) and terrestrial invertebrates were present in relatively low frequencies, and the striped field mouse (Apodemus agrarius) was present in high frequencies. Voles (Microtus sp.) were more frequent in colonies with prevalence of non-irrigated arable land around the colony, in contrast to the bank vole (Myodes glareolus), which was less common in heronries with a higher contribution of this habitat type. Remains of aquatic invertebrates were less abundant in colonies surrounded by extensive forests. The results of our research indicate the opportunistic character of the non-fish part of the diet of the Grey Heron adapted to the local foraging habitat and prey availability. Full article

The relationship between the body condition of different small mammal species and the habitat they occupy is poorly analyzed. We analyzed the body condition index, BCI, of 18 small mammal species trapped in forest, shrub, wetland, meadow, riparian, mixed and fragmented, disturbed, agricultural, and commensal habitats of Lithuania during the span of 1980–2023. The composition of small mammal communities was habitat-dependent, being richest in meadows, with eighteen species, and poorest in riparian habitats, with nine species. A significant variation in the BCI with respect to habitat was observed in eight small mammal species (Sorex araneus, S. minutus, Apodemus agrarius, A. flavicollis, Clethrionomys glareolus, Alexandromys oeconomus, Microtus agrestis, and M. arvalis). The highest average BCI for most of these species was found in disturbed habitats, with S. minutus and M. arvalis showing the highest BCI in agricultural habitats. The lowest average BCI for most species was found in mixed habitats, while C. glareolus and M. arvalis exhibited the lowest BCI in shrub habitats. In general, species dominating certain habitats did not have the highest BCI. This is the first multi-species, multi-habitat study of body condition in small mammals at mid-latitudes. Full article

Globally, Enterocytozoon bieneusi has been detected in humans and various animal hosts. Wild rats and shrews have the potential to act as carriers of E. bieneusi, facilitating the parasite’s transmission to humans and domestic animals. We aimed to investigate the prevalence of E. bieneusi in 652 wild rats and shrews from Zhejiang Province, China, by amplifying the internal transcribed spacer (ITS) region of rDNA through polymerase chain reaction (PCR). To determine animal species, we amplified the Cytochrome b (Cyt-b) gene in their fecal DNA using PCR. Furthermore, we determined the genotype of E. bieneusi by amplifying the ITS region of rDNA through PCR. Genetic traits and zoonotic potential were evaluated using similarity and phylogenetic analyses. Suncus murinus (n = 282) and five rat species, Rattus losea (n = 18), Apodemus agrarius (n = 36), Rattus tanezumi (n = 86), Rattus norvegicus (n = 155), and Niviventer niviventer (n = 75), were identified. The average infection rate of E. bieneusi was 14.1% (92/652) with 18.1% (51/282) in S. murinus and 11.1% (41/370) in rats (27.8% in R. losea, 22.2% in A. agrarius, 10.5% in R. tanezumi, 8.4% in R. norvegicus, and 8.0% in N. niviventer). Thirty-three genotypes were identified, including 16 known genotypes. The most commonly known genotypes were HNR-VI (n = 47) and Peru11 (n = 6). Type IV, KIN-1, SHW7, and HNPL-II were each found in two samples, while Macaque4, CH5, K, Henan-III, Henan-V, HNP-II, HNPL-I, HNPL-III, HNHZ-II, and HNHZ-III were each found in one sample. Additionally, 17 novel genotypes were discovered: WZR-VIII (n = 5), WZR-I to WZR-VII, WZR-IX to WZR-XII, and WZSH-I to WZSH-V (n = 1 each). Those 33 genotypes were divided into three groups: Group 1 (n = 25), Group 2 (n = 3), and Group 13 (n = 5). The initial report underscores the extensive occurrence and notable genetic diversity of E. bieneusi in wild rats and shrews from Zhejiang province, China. These results suggest that these animals play a pivotal role in the transmission of E. bieneusi. Furthermore, animals carrying the zoonotic genotypes of E. bieneusi pose a serious threat to residents. Full article

Rodents, including the striped field mouse (Apodemus agrarius), play vital roles in ecosystem functioning, with their gut microbiota contributing significantly to various ecological processes. Here, we investigated the structure and function of 94 wild A. agrarius individuals from 7 geographic populations (45°57′ N, 126°48′ E; 45°87′ N, 126°37′ E; 45°50′ N, 125°31′ E; 45°59′ N, 124°37′ E; 46°01′ N, 124°88′ E; 46°01′ N, 124°88′ E; 46°01′ N, 124°88′ E), revealing two distinct enterotypes (Type1 and Type2) for the first time. Each enterotype showed unique microbial diversity, functions, and assembly processes. Firmicutes and Bacteroidetes dominated, with a significant presence of Lactobacillus and Muribaculaceae. Functional analysis highlighted metabolic differences, with Type1 emphasizing nutrient processing and Type2 showing higher energy production capacity. The analysis of the neutral model and the null model revealed a mix of stochastic (drift and homogenizing dispersal) and deterministic processes (homogenous selection) that shape the assembly of the microbiota, with subtle differences in the assembly processes between the two enterotypes. Correlation analysis showed that elevation and BMI were associated with the phylogenetic turnover of microbial communities, suggesting that variations in these factors may influence the composition and diversity of the gut microbiota in A. agrarius. Our study sheds light on gut microbial dynamics in wild A. agrarius populations, highlighting the importance of considering ecological and physiological factors in understanding host–microbiota interactions. Full article

Despite the large number of studies on rodent ectoparasites—most of them vectors of epidemiologically important pathogens—infestation patterns remain poorly understood in various ecological contexts, such as the highly patchy agricultural landscapes. We aimed to relate the infestation of rodents to temporal, habitat, and host variables. We assessed the difference in parasite prevalence and mean abundance depending on host sex, age, and body weight, season, and land use intensity. Furthermore, we analysed the effect of host species abundance and the differential responses of parasites in main and minor host species. The field survey was conducted in a rural landscape in southern Transylvania (Romania) between June and September 2010–2011. We live-trapped small mammals, collected the ticks and fleas, and recorded the presence of lice and mites. Overall, we found the same infestation patterns largely reported in the literature: higher prevalence and mean abundance in heavier adult males, significant seasonality and differences among host species, and evidence of the dilution effect. The uniqueness of our study system was the negative effect of the land use intensity on the prevalence and mean abundance of parasites, explained by the highly patchy mosaic landscape. Full article

In mountainous regions, diverse ecosystems provide a habitat for numerous species of organisms. In this study, we focused on ixodid ticks and their presence in the Western Carpathians, Poland. Our objectives were to investigate the impact of environmental factors on tick occurrence and activity, the prevalence of vectored pathogens, and tick hosts, and their role as reservoir organisms for tick-borne pathogens (TBPs). To this end, we collected ticks from the vegetation and from animals (Apodemus agrarius, A. flavicollis, Capreolus capreolus, Microtus spp., Myodes glareolus, Ovis aries). In addition, we collected blood samples from rodents. The collected material underwent molecular analysis, utilizing the high-throughput microfluidic real-time PCR technique, to detect the presence of TBPs. Our findings confirmed the occurrence of only two species of ixodid ticks in the study area: the dominant Ixodes ricinus, and Dermacentor reticulatus with very limited abundance. Temperature significantly influenced tick activity, and the number of I. ricinus nymphs varied with altitude. We also observed a circadian pattern of questing activity in I. ricinus ticks. The main hosts for juvenile tick stages were M. glareolus and A. agrarius, while adult stages were frequently found on C. capreolus. I. ricinus ticks collected from the vegetation were often infected with Rickettsia helvetica (up to 35.71%), Borrelia afzelii (up to 28.57%), and Ehrlichia spp. (up to 9.52%). In contrast, juvenile stages frequently carried Bartonella spp. (up to 10.00%), Mycoplasma spp. (up to 16.67%) and R. helvetica (up to 16.67%). Moreover, we detected genetic material of Mycoplasma spp. (up to 100.00%), Ehrlichia spp. (up to 35.71%), Bartonella spp. (up to 25.00%), and Borrelia spp. (up to 6.25%) in rodent blood samples. The obtained results indicate A. agrarius and M. glareolus as reservoir animals for TBPs in the studied region. Full article

The Vistula River is one of the largest European semi-natural rivers of high ecological value that functions as an ecological corridor. To assess the structure of small mammal communities along the Vistula River, an analysis of the diet of an opportunistic predator, the tawny owl Strix aluco, was used. A total of 6355 individuals of 19 species were found, including 5 soricomorph species, 12 rodents, 1 carnivore, and 1 bat species. Tawny owls most frequently caught Apodemus agrarius, Clethrionomys glareolus, Apodemus flavicollis, and Microtus arvalis. Rodents dominated small mammal communities (90%), followed by soricomorphs (8%), and the share of Chiroptera was significant (2%). Using Ward’s method in cluster analysis, three clusters of sites with similar mammal communities were identified. The cluster that included 17 study sites with the dominance of agriculture habitats was inhabited by diverse mammal communities with a high number of species. In the cluster composed of three suburban forest sites, mammal communities had the lowest diversity, although the high species richness and the highest shares of the forest species (A. flavicollis, C. glareolus, and Nyctalus noctula). Mammal communities in the cluster were composed of three urban sites were dominated by A. agrarius and M. arvalis. The study indicates the high species richness of small mammals in floodplains of the Vistula River and the adjacent areas in central Poland. The floodplain offers suitable habitats for species associated with forests, water bodies, agricultural land, and developed areas. The data collected confirms earlier model predictions about the presence of well-connected local populations of forest mammals along the Vistula River. Full article

The striped field mouse (Apodemus agrarius Pallas, 1771) is a widespread species in Northern Eurasia. It damages crops and carries zoonotic pathogens. Its current and future range expansion under climate change may negatively affect public health and the economy, warranting further research to understand the ecological and invasive characteristics of the species. In our study, we used seven algorithms (GLM, GAM, GBS, FDA, RF, ANN, and MaxEnt) to develop robust ensemble species distribution models (eSDMs) under current (1970–2000) and future climate conditions derived from global circulation models (GCMs) for 2021–2040, 2041–2060, 2061–2080, and 2081–2100. Simulation of climate change included high-, medium-, and low-sensitivity GCMs under four scenarios (SSP1-2.6, SSP2-4.5, SSP3-7.0, and SSP5-8.5). We analyzed the habitat suitability across GCMs and scenarios by constructing geographical ranges and calculating their centroids. The results showed that the range changes depended on both the sensitivity of GCMs and scenario. The main trends were range expansion to the northeast and partial loss of habitat in the steppe area. The striped field mouse may form a continuous range from Central Europe to East Asia, closing the range gap that has existed for 12 thousand years. We present 49 eSDMs for the current and future distribution of A. agrarius (for 2000–2100) with quantitative metrics (gain, loss, change) of the range dynamics under global climate change. The most important predictor variables determining eSDMs are mean annual temperature, mean diurnal range of temperatures, the highest temperature of the warmest month, annual precipitation, and precipitation in the coldest month. These findings could help limit the population of the striped field mouse and predict distribution of the species under global climate change. Full article