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Authors = Jae Cheon Kim

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21 pages, 3692 KiB  
Article
Anti-Obesity Effects of Rosa rugosa Thunb. Flower Bud Extracts on Lipid Metabolism Regulation in 3T3-L1 Adipocytes and Sprague Dawley Rats
by Jung Min Kim, Kyoung Kon Kim, Hye Rim Lee, Jae Cheon Im and Tae Woo Kim
Int. J. Mol. Sci. 2025, 26(14), 6963; https://doi.org/10.3390/ijms26146963 - 20 Jul 2025
Viewed by 321
Abstract
In modern society, obesity and its associated complications have emerged as serious public health concerns, primarily stemming from sedentary lifestyles and carbohydrate-rich diets. Due to the severe side effects often associated with pharmacological anti-obesity agents, emerging global efforts focus on preventive strategies, e.g., [...] Read more.
In modern society, obesity and its associated complications have emerged as serious public health concerns, primarily stemming from sedentary lifestyles and carbohydrate-rich diets. Due to the severe side effects often associated with pharmacological anti-obesity agents, emerging global efforts focus on preventive strategies, e.g., dietary modifications and weight gain-suppressing functional foods. In this context, plant-derived metabolites are extensively investigated for their beneficial anti-obesity effects. In this study, we evaluated how Rosa rugosa Thunb. flower bud extract affects fat metabolism in 3T3-L1 preadipocyte cells. The extract significantly inhibited adipocyte differentiation and intracellular triglyceride accumulation in 3T3-L1 cells, enhanced lipolysis, suppressed lipogenesis, and promoted energy metabolism in differentiated adipocytes. In vivo, it reduced body and organ weights and fat mass in high-fat diet-induced obese rats, along with marked adipocyte size and hepatic lipid accumulation reductions. In the epididymal adipose tissue, the extract similarly enhanced lipolytic activity, suppressed lipogenic enzyme expression, and stimulated energy expenditure. Taken together, our results demonstrate the potential of R. rugosa Thunb. flower bud extract in reducing fat accumulation through lipid metabolism modulation both in cellular and animal models. Further studies are warranted to identify the active constituents and evaluate the safety and efficacy of the extract in clinical applications. Full article
(This article belongs to the Special Issue High Fat Diet Metabolism and Diseases)
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13 pages, 3561 KiB  
Article
Retrospective Clinical Trial to Evaluate the Effectiveness of a New Tanner–Whitehouse-Based Bone Age Assessment Algorithm Trained with a Deep Neural Network System
by Meesun Lee, Young-Hun Choi, Seul-Bi Lee, Jae-Won Choi, Seunghyun Lee, Jae-Yeon Hwang, Jung-Eun Cheon, SungHyuk Hong, Jeonghoon Kim and Yeon-Jin Cho
Diagnostics 2025, 15(8), 993; https://doi.org/10.3390/diagnostics15080993 - 14 Apr 2025
Viewed by 633
Abstract
Background/Objectives: To develop an automated deep learning-based bone age prediction model using the Tanner–Whitehouse (TW3) method and evaluate its feasibility by comparing its performance with that of pediatric radiologists. Methods: The hand and wrist radiographs of 560 Korean children and adolescents [...] Read more.
Background/Objectives: To develop an automated deep learning-based bone age prediction model using the Tanner–Whitehouse (TW3) method and evaluate its feasibility by comparing its performance with that of pediatric radiologists. Methods: The hand and wrist radiographs of 560 Korean children and adolescents (280 female, 280 male, mean age 9.43 ± 2.92 years) were evaluated using the TW3-based model and three pediatric radiologists. Images with bony destruction, congenital anomalies, or non-diagnostic quality were excluded. A commercialized AI solution built upon the Rotated Single Shot MultiBox Detector (SSD) and EfficientNet-B0 was used. Bone age measurements from the model and radiologists were compared using the paired t-tests. Linear regression analysis was performed and the coefficient of determination (r²), mean absolute error (MAE), and root mean square error (RMSE) were measured. A Bland–Altman analysis was conducted and the proportion of bone age predictions within 0.6 years of the radiologists’ assessments was calculated. Results: The TW3-based model demonstrated no significant differences between bone age measurements and radiologists, except for participants <6 and >13 years old (overall, p = 0.874; 6–8 years, p = 0.737; 8–9 years, p = 0.093; 9–10 years, p = 0.301; 10–11 years, p = 0.584; 11–13 years, p = 0.976; <6 or >13 years, p < 0.001). There was a strong linear correlation between the model prediction and radiologist assessments (r2 = 0.977). The RMSE and MAE values of the model were 0.529 (95% CI, 0.482–0.575) and 0.388 (95% CI, 0.361–0.417) years. Overall, 82.3% of bone age model predictions were within 0.6 years of the radiologists’ interpretation. Conclusions: Automated deep learning-based bone age assessment has the potential to reduce radiologists’ workload and provide standardized measurements for clinical decision making. Full article
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18 pages, 12445 KiB  
Article
New Cannabinoids and Chlorin-Type Metabolites from the Flowers of Cannabis sativa L.: A Study on Their Neuroblastoma Activity
by Tuan-Quoc Nguyen, Hyo-Shin Park, Sun-Hyeong Choi, Da-Yun Hong, Jae-Yong Cheon, Young-Mi Lee, Chul-Min Kim, Jong-Ki Hong, Seo-Jeong Oh, Man-Soo Cho, Jang-Hoon Kim, Eun-Sol Lee, Jungwon Seo and Hyun-Ju Jung
Pharmaceuticals 2025, 18(4), 521; https://doi.org/10.3390/ph18040521 - 3 Apr 2025
Viewed by 6783
Abstract
Background/Objectives: Cannabis sativa has been utilized for medical purposes for thousands of years. It continues to be recognized as a plant with an extensive variety of medicinal and nutraceutical uses today. In this study, a chemical investigation of the flowers of C. [...] Read more.
Background/Objectives: Cannabis sativa has been utilized for medical purposes for thousands of years. It continues to be recognized as a plant with an extensive variety of medicinal and nutraceutical uses today. In this study, a chemical investigation of the flowers of C. sativa isolated by using a variety of chromatographic techniques led to the isolation of eleven compounds. These purified compounds were evaluated for antitumor activity against SK-N-SH neuroblastoma cells. Methods: The compounds were isolated by using chromatographic techniques. Their structures were identified by the examination of spectroscopic methods, including 1D (1H, 13C, and DEPT) and 2D (COSY, HSQC, HMBC, and NOESY) nuclear magnetic resonance (NMR) spectra and mass spectrum, together with the comparison to those reported previously in the literature. The evaluation of toxicity on SK-N-SH cells was performed by the MTT method. Results: Eleven compounds were isolated from the flowers of C. sativa, including two new compounds, namely cannabielsoxa (1), 132-hydroxypheophorbide c ethyl ester (2), and six known cannabinoids (611), together with the first isolation of chlorin-type compounds: pyropheophorbide A (3), 132-hydroxypheophorbide b ethyl ester (4), and ligulariaphytin A (5) from this plant. The results also demonstrated that cannabinoid compounds had stronger inhibitory effects on neuroblastoma cells than chlorin-type compounds. Conclusions: The evaluation of the biological activities of compounds showed that compounds 410 could be considered as the potential compounds for antitumor effects against neuroblastomas. This is also highlighted by using docking analysis. Additionally, the results of this study also suggest that these compounds have the potential to be developed into antineuroblastoma products. Full article
(This article belongs to the Special Issue Pharmacologically Active Compounds from Plants)
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15 pages, 1408 KiB  
Article
Impact of csDMARDs vs. b/tsDMARDs on the Prognosis of Rheumatoid Arthritis-Associated Interstitial Lung Disease: A Multicenter, Retrospective Study
by Kyung-Ann Lee, Bo Young Kim, Sung Soo Kim, Yun Hong Cheon, Sang-Hyon Kim, Jae Hyun Jung, Geun-Tae Kim, Jin-Wuk Hur, Myeung-Su Lee, Chong Hyuk Chung, Yun Sung Kim, Seung-Jae Hong, Hae-Rim Kim, Hong Ki Min, Se Hee Kim, Su-Jin Moon, Sung Hae Chang, Soojin Im, Bo Da Nam and Hyun-Sook Kim
Diagnostics 2025, 15(7), 800; https://doi.org/10.3390/diagnostics15070800 - 21 Mar 2025
Viewed by 904
Abstract
Background/Objectives: Rheumatoid arthritis-associated interstitial lung disease (RA-ILD) significantly affects disease prognosis and patient survival. The impact of conventional synthetic DMARDs (csDMARDs) and biologic/targeted synthetic DMARDs (b/tsDMARDs) on RA-ILD prognoses remains unclear. This study aimed to investigate the effects of csDMARDs and b/tsDMARDs [...] Read more.
Background/Objectives: Rheumatoid arthritis-associated interstitial lung disease (RA-ILD) significantly affects disease prognosis and patient survival. The impact of conventional synthetic DMARDs (csDMARDs) and biologic/targeted synthetic DMARDs (b/tsDMARDs) on RA-ILD prognoses remains unclear. This study aimed to investigate the effects of csDMARDs and b/tsDMARDs on RA-ILD progression and prognosis based on pulmonary function tests (PFTs), high-resolution computed tomography (HRCT), and symptom changes. Methods: This multicenter, retrospective, observational study included patients with RA-ILD at 13 referral hospitals in South Korea. The participants were categorized into csDMARD-only and b/tsDMARD-exposed groups. RA-ILD prognosis was assessed over a 24-month follow-up period using serial PFTs (the forced vital capacity [FVC] and diffusing capacity of the lungs for carbon monoxide [DLCO]), HRCT findings, and clinical symptom changes. Kaplan–Meier survival analyses and Cox proportional hazards models were used to compare disease progression risk while adjusting for baseline lung function, RA disease activity, and glucocorticoid use. Results: Among 127 eligible patients, 22 (17.3%) were exposed to b/tsDMARDs, predominantly abatacept and tocilizumab. During a mean follow-up of 2.8 years, 65 (51.2%) patients experienced RA-ILD progression. A higher baseline Disease Activity Score-28 with erythrocyte sedimentation rate (DAS28-ESR) (adjusted hazard ratio [aHR]: 1.344, 95% confidence interval [CI]: 1.136–1.590, p = 0.001) and initially prescribed prednisone dose (aHR: 1.078, 95% CI: 1.011–1.151, p = 0.023) were significant prognostic factors for ILD progression. No statistically significant difference in progression risk was observed between the csDMARD-only and b/tsDMARD-exposed groups (aHR: 0.937, p = 0.851). Conclusions: The RA-ILD prognosis was more strongly influenced by disease activity, rather than the type of DMARD used. These findings emphasize the importance of maintaining low RA disease activity to improve RA-ILD prognosis. Full article
(This article belongs to the Section Clinical Diagnosis and Prognosis)
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14 pages, 979 KiB  
Article
Efficacy of ETB-F01, Heat-Killed Akkermansia muciniphila Strain EB-AMDK19, in Patients with Respiratory Symptoms: A Multicenter Clinical Trial
by Hyun Woo Lee, Sang-Nam Lee, Jae-Gu Seo, Yemo Koo, Sung-Yoon Kang, Cheon Woong Choi, So-Young Park, Suh-Young Lee, Sung-Ryeol Kim, Joo-Hee Kim and Hye Sook Choi
Nutrients 2024, 16(23), 4113; https://doi.org/10.3390/nu16234113 - 28 Nov 2024
Cited by 3 | Viewed by 2513
Abstract
Respiratory symptoms are prevalent in the general population, and they are associated with a decline in lung function and increased mortality. The gut–lung connection suggests intestinal dysbiosis may impact lung diseases, with Akkermansia muciniphila showing promise in regulating extraintestinal diseases. However, its application [...] Read more.
Respiratory symptoms are prevalent in the general population, and they are associated with a decline in lung function and increased mortality. The gut–lung connection suggests intestinal dysbiosis may impact lung diseases, with Akkermansia muciniphila showing promise in regulating extraintestinal diseases. However, its application in patients with respiratory symptoms lacks clinical trial evidence. In this randomized, double-blind trial, ETB-F01, containing heat-killed A. muciniphila strain EB-AMDK19, was compared with a placebo in patients experiencing respiratory symptoms for 4 to 12 weeks. The primary outcome was improvement in Breathlessness, Cough, and Sputum Scale (BCSS) score over 12 weeks. Secondary outcomes included lung function, fractional exhaled nitric oxide (FeNO), modified Medical Research Council (mMRC) dyspnea scale, St. George’s Respiratory Questionnaire (SGRQ), and Visual Analog Scale (VAS) score. The primary analysis was performed in the per-protocol set, with a sensitivity analysis in the full analysis set. In the per-protocol population, 68 participants were randomly assigned to the ETB-F01 group and 65 to the placebo group. ETB-F01 had a superior efficacy over placebo in improving BCSS total scores (between-group difference = −0.8 (95% confidence interval, −1.4–−0.3), p-value = 0.004). Specifically, there was a significant reduction in BCSS breathlessness and cough domain scores with ETB-F01. While trends toward improvement in lung function were noted, statistical significance was not achieved. No significant differences were observed in FeNO and other symptom scores (mMRC, SGRQ, and VAS). In safety profile, ETB-F01 did not cause any serious adverse events. These results suggest that ETB-F01 is safe and effective for alleviating respiratory symptoms. Full article
(This article belongs to the Section Nutrition and Public Health)
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10 pages, 1108 KiB  
Article
Effects of Forearm Resistance Exercises on Breast Cancer-Related Lymphedema Using Segmental Bioelectrical Impedance Analysis: A Pilot Randomized Controlled Trial
by Woo Chul Son, Sang Ah Kim, Ah Hyun Kim, Hawyeong Cheon and Jae Yong Jeon
J. Clin. Med. 2024, 13(23), 7200; https://doi.org/10.3390/jcm13237200 - 27 Nov 2024
Cited by 3 | Viewed by 1268
Abstract
Background: Breast cancer-related lymphedema (BCRL) reduces the quality of life of patients and limits their activities of daily living. Even though resistance exercises seemed to be safe in BCRL patients, it was still controversial that resistance exercises improve lymphedema. Therefore, we sought [...] Read more.
Background: Breast cancer-related lymphedema (BCRL) reduces the quality of life of patients and limits their activities of daily living. Even though resistance exercises seemed to be safe in BCRL patients, it was still controversial that resistance exercises improve lymphedema. Therefore, we sought to evaluate the effects of forearm-targeted resistance exercises on BCRL using segmental bioelectrical impedance analysis (BIA). Methods: This study was a pilot-controlled randomized trial, with patients divided into the intervention and the control group. Both groups received 30 min of complete decongestive therapy (CDT) for 2 weeks. In addition, the intervention group received forearm strengthening training including warm-up and cool-down for an extra 20 min, and the control group received stretching exercises. 5 kHz impedance ratios were assessed by segmental BIA before and after treatments. Results: Among the eighteen patients enrolled, ten were assigned to the intervention group, and eight were in the control group. Only the 5 kHz impedance ratio in the forearm segment of the intervention group showed a statistically significant difference. The effect sizes of the groups were 0.71 for the intervention group and 0.93 in the between-group comparison. Conclusions: Forearm resistance exercises in patients with BCRL showed a significant decrease in extracellular fluid in the proximal forearm segment when using segmental BIA. Therefore, we suggest that resistance exercises targeting the forearm might be effective in treating lymphedema. Full article
(This article belongs to the Special Issue Recent Progress in Rehabilitation Medicine—2nd Edition)
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14 pages, 24410 KiB  
Article
Characteristics of Merging Plasma Plumes for Materials Process Using Two Atmospheric Pressure Plasma Jets
by Sang Un Jeon, Jae Wan Kim, Hyun-Young Lee, Gyoo-Cheon Kim and Hae June Lee
Materials 2024, 17(19), 4928; https://doi.org/10.3390/ma17194928 - 9 Oct 2024
Cited by 2 | Viewed by 1206
Abstract
Atmospheric pressure plasma jets (APPJs) have attracted significant attention due to their ability to generate plasma without vacuum systems, facilitating their use in small areas of plasma processing applications across various fields, including medicine, surface treatment, and agriculture. In this study, we investigate [...] Read more.
Atmospheric pressure plasma jets (APPJs) have attracted significant attention due to their ability to generate plasma without vacuum systems, facilitating their use in small areas of plasma processing applications across various fields, including medicine, surface treatment, and agriculture. In this study, we investigate the interaction between two helium plasma jets, focusing on the effects of varying flow rate, voltage, and directional angle. By examining both in-phase and out-of-phase configurations, this research aims to elucidate the fundamental mechanisms of plasma plume merging, which has critical implications for optimizing plasma-based material processing systems. We demonstrate that while increasing voltage and flow rate for the in-phase condition leads to an extended plasma plume length, the plumes do not merge, maintaining a minimal gap. Conversely, plasma plume merging is observed for the out-of-phase condition, facilitated by forming a channel between the jets. This study further explores the impact of these merging phenomena on plasma chemistry through optical emission spectroscopy, revealing substantial differences in the emission intensities of OH, the second positive system of N2, and the first negative system of N2+. These findings offer valuable insights into controlling plasma jet interactions for enhanced efficiency in plasma-assisted processes, particularly where plume merging can be leveraged to improve the treatment area and intensity. Full article
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14 pages, 1939 KiB  
Article
Comparison of Tumor Microenvironments between Primary Tumors and Lymph Node Metastases in Head and Neck Squamous Cell Carcinoma and Their Predictive Role in Immune Checkpoint Inhibitor Treatment
by Dong Hyun Kim, Jong Seok Ahn, Mingu Kang, Gahee Park, Yoojoo Lim, Soohyun Hwang, Chan-Young Ock, Jiwon Koh, Eun-Jae Chung, Seong-Keun Kwon, Yoon Kyung Jeon, Kyeong Cheon Jung, Soon-Hyun Ahn and Bhumsuk Keam
Cells 2024, 13(18), 1557; https://doi.org/10.3390/cells13181557 - 16 Sep 2024
Cited by 2 | Viewed by 1479
Abstract
The relationship between tumor microenvironments (TMEs) of regional lymph node metastases (LNMs) and primary tumors in head and neck squamous cell carcinoma (HNSCC) remains unclear. This study compared tumor-infiltrating lymphocytes (TILs) and the immune phenotype (IP), characterized by spatial TIL distribution, between primary [...] Read more.
The relationship between tumor microenvironments (TMEs) of regional lymph node metastases (LNMs) and primary tumors in head and neck squamous cell carcinoma (HNSCC) remains unclear. This study compared tumor-infiltrating lymphocytes (TILs) and the immune phenotype (IP), characterized by spatial TIL distribution, between primary tumors and LNMs. Twenty-one HNSCC patients with regional LNM who received immune checkpoint inhibitors (ICIs) were included. A paired comparative analysis of TIL densities and IP between primary tumors and LNMs revealed no significant difference or correlation between TIL densities in primary tumors and LNMs. Their IPs were discordant in 12 patients (57.1%). Patients with high intratumoral TIL exhibited longer progression-free survival (PFS) than those with low intratumoral TIL in both primary tumors (median, 5.2 vs. 1.3 months, p = 0.003) and LNMs (median, 30.2 vs. 1.3 months, p = 0.012). Patients with inflamed IP exhibited longer PFS than those with non-inflamed IP in both primary tumors (median, 4.5 vs. 1.3 months, p = 0.043) and LNMs (median, 4.1 vs. 1.3 months, p = 0.037). Given the lack of correlation in TIL densities, the discrepancies in IP, and the predictive value of both TMEs, evaluating the TMEs of both primary tumors and LNMs may be beneficial for the precise use of ICIs in HNSCC. There was a significant discordance between the TME of primary tumors and LNMs, with implications in survival outcomes. Therefore, evaluating the TME of both the primary tumor and LNM could be beneficial for the precise use of ICIs in HNSCC. Full article
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28 pages, 10222 KiB  
Article
Integrated Analysis of Microbiome and Metabolome Reveals Disease-Specific Profiles in Inflammatory Bowel Diseases and Intestinal Behçet’s Disease
by Yehyun Park, Jae Bum Ahn, Da Hye Kim, I Seul Park, Mijeong Son, Ji Hyung Kim, Hyun Woo Ma, Seung Won Kim and Jae Hee Cheon
Int. J. Mol. Sci. 2024, 25(12), 6697; https://doi.org/10.3390/ijms25126697 - 18 Jun 2024
Cited by 6 | Viewed by 2840
Abstract
The gut microbial and metabolic characteristics of intestinal Behçet’s disease (BD), a condition sharing many clinical similarities with ulcerative colitis (UC) and Crohn’s disease (CD), are largely unexplored. This study investigated the gut microbial and metabolic characteristics of intestinal BD as well as [...] Read more.
The gut microbial and metabolic characteristics of intestinal Behçet’s disease (BD), a condition sharing many clinical similarities with ulcerative colitis (UC) and Crohn’s disease (CD), are largely unexplored. This study investigated the gut microbial and metabolic characteristics of intestinal BD as well as potential biomarkers, comparing them with those in UC, CD, and healthy controls. Colon tissue and stool samples from 100 patients (35 UC, 30 CD, and 35 intestinal BD) and 41 healthy volunteers were analyzed using 16S ribosomal RNA sequencing to assess microbial diversity, taxonomic composition, and functional profiling. Plasma metabolomic analyses were performed using gas chromatography and ultra-performance liquid chromatography-mass spectrometry. Results indicated reduced microbial diversity in CD but not in intestinal BD, with intestinal BD showing fewer changes compared to controls yet distinct taxonomic features from UC, CD, and controls. Common alterations across all diseases included a reduction in beneficial bacteria producing short-chain fatty acids. Intestinal BD-specific changes featured a decreased abundance of Bacteroides fragilis. Metabolomic profiles in intestinal BD were similar to those in CD but distinct from those in UC, displaying significant changes in energy metabolism and genetic information processing. This integrative analysis revealed both shared and unique profiles in intestinal BD compared with UC, CD, and controls, advancing our understanding of the distinctive features of these diseases. Full article
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17 pages, 2806 KiB  
Article
Map-Based Cloning and Characterization of a Major QTL Gene, FfR1, Which Confers Resistance to Rice Bakanae Disease
by Hyeonso Ji, Kyeong-Seong Cheon, Yunji Shin, Chaewon Lee, Seungmin Son, Hyoja Oh, Dong-Kyung Yoon, Seoyeon Lee, Mihyun Cho, Soojin Jun, Gang-Seob Lee, Jeongho Baek, Song Lim Kim, Il-Pyung Ahn, Jae-Hyeon Oh, Hye-Jin Yoon, Young-Soon Cha and Kyung-Hwan Kim
Int. J. Mol. Sci. 2024, 25(11), 6214; https://doi.org/10.3390/ijms25116214 - 5 Jun 2024
Cited by 3 | Viewed by 1819
Abstract
Bakanae disease (BD), caused by the fungal pathogen Fusarium fujikuroi, is a serious threat to rice production worldwide. Breeding elite rice varieties resistant to BD requires the identification of resistance genes. Previously, we discovered a resistant quantitative trait locus (QTL), qFfR1, [...] Read more.
Bakanae disease (BD), caused by the fungal pathogen Fusarium fujikuroi, is a serious threat to rice production worldwide. Breeding elite rice varieties resistant to BD requires the identification of resistance genes. Previously, we discovered a resistant quantitative trait locus (QTL), qFfR1, in a Korean japonica rice variety, Nampyeong. In this study, we fine-mapped qFfR1 with a Junam*4/Nampyeong BC3F3 population and delimited its location to a 37.1 kb region on chromosome 1. Complementation experiments with seven candidate genes in this region revealed that OsI_02728 is the gene for qFfR1. This gene encodes a protein with a typical leucine-rich repeat (LRR) receptor-like protein structure. RNA-sequencing-based transcriptomic analysis revealed that FfR1 induces the transcription of defense genes, including lignin and terpenoid biosynthesis genes, pathogenesis-related genes, and thionin genes. These results may facilitate investigations into the molecular mechanisms underlying BD resistance, including molecular patterns of Fusarium fujikuroi interacting with FfR1 and players working in signal transduction pathways downstream of FfR1, and the breeding of new BD-resistant varieties by providing a BD resistance gene with its precise selection marker. This will contribute to efficient control of BD, which is becoming more prevalent according to temperature rises due to climate change. Full article
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23 pages, 19862 KiB  
Article
A Comprehensive Understanding of Post-Translational Modification of Sox2 via Acetylation and O-GlcNAcylation in Colorectal Cancer
by Yoojeong Seo, Dong Keon Kim, Jihye Park, Soo Jung Park, Jae Jun Park, Jae Hee Cheon and Tae Il Kim
Cancers 2024, 16(5), 1035; https://doi.org/10.3390/cancers16051035 - 3 Mar 2024
Cited by 2 | Viewed by 2685
Abstract
Aberrant expression of the pluripotency-associated transcription factor Sox2 is associated with poor prognosis in colorectal cancer (CRC). We investigated the regulatory roles of major post-translational modifications in Sox2 using two CRC cell lines, SW480 and SW620, derived from the same patient but with [...] Read more.
Aberrant expression of the pluripotency-associated transcription factor Sox2 is associated with poor prognosis in colorectal cancer (CRC). We investigated the regulatory roles of major post-translational modifications in Sox2 using two CRC cell lines, SW480 and SW620, derived from the same patient but with low and high Sox2 expression, respectively. Acetylation of K75 in the Sox2 nuclear export signal was relatively increased in SW480 cells and promotes Sox2 nucleocytoplasmic shuttling and proteasomal degradation of Sox2. LC-MS-based proteomics analysis identified HDAC4 and p300 as binding partners involved in the acetylation-mediated control of Sox2 expression in the nucleus. Sox2 K75 acetylation is mediated by the acetyltransferase activity of CBP/p300 and ACSS3. In SW620 cells, HDAC4 deacetylates K75 and is regulated by miR29a. O-GlcNAcylation on S246, in addition to K75 acetylation, also regulates Sox2 stability. These findings provide insights into the regulation of Sox2 through multiple post-translational modifications and pathways in CRC. Full article
(This article belongs to the Special Issue Targeted Therapy in Gastrointestinal Cancer)
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14 pages, 2177 KiB  
Article
Influence of Curved Video Laryngoscope Blade Sizes and Patient Heights on Video Laryngoscopic Views: A Randomized Controlled Trial
by Jong-Ho Kim, Bo-Reum Cheon, Hyesook Kim, Sung-Mi Hwang, Jae-Jun Lee and Young-Suk Kwon
J. Pers. Med. 2024, 14(2), 209; https://doi.org/10.3390/jpm14020209 - 15 Feb 2024
Cited by 2 | Viewed by 2543
Abstract
This study aimed to compare the video laryngoscope views facilitated by curved blades 3 and 4 with an exploration of the relationship between these views and patient height. Conducted as a randomized controlled trial, this study enrolled adults scheduled for surgery under general [...] Read more.
This study aimed to compare the video laryngoscope views facilitated by curved blades 3 and 4 with an exploration of the relationship between these views and patient height. Conducted as a randomized controlled trial, this study enrolled adults scheduled for surgery under general anesthesia. Intubation procedures were recorded, and the percentage of glottic opening was measured before tube insertion. Multivariate analysis validated the impact of various factors, including blade size and patient height, on the percentage of glottic opening scores. A total of 192 patients were included. The median percentage of glottic opening scores for curved blades 3 and 4 were 100 and 83, respectively (p < 0.001). The unstandardized coefficient indicated a significant negative impact of blade 4 on the percentage of glottic opening scores (−13, p < 0.001). In the locally estimated scatterplot smoothing analysis, blade 3 exhibited a steady rise in glottic opening scores with increasing height, whereas blade 4 showed a peak followed by a decline around 185 cm. The unstandardized coefficient of height showed no significant association (0, p = 0.819). The study observed superior laryngoscopic views with blade 3 compared to blade 4. However, no significant association was found between laryngoscopic views and patient height. Full article
(This article belongs to the Section Clinical Medicine, Cell, and Organism Physiology)
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19 pages, 3125 KiB  
Article
Comprehensive Characterization of Global Barley (Hordeum vulgare L.) Collection Using Agronomic Traits, β-Glucan Level, Phenolic Content, and Antioxidant Activities
by Kebede Taye Desta, Yu-Mi Choi, Hyemyeong Yoon, Sukyeung Lee, Jungyoon Yi, Young-ah Jeon, Xiaohan Wang, Jin-Cheon Park, Kyeong-Min Kim and Myoung-Jae Shin
Plants 2024, 13(2), 169; https://doi.org/10.3390/plants13020169 - 8 Jan 2024
Cited by 10 | Viewed by 2537
Abstract
This study characterized the diversity of 367 barley collections from 27 different countries, including 5 control cultivars, using several phenotypic traits. Morphological traits, including spike type, grain morphology, cold damage, and lodging rate, exhibited wide variations. Eighteen accessions matured early, while four accessions [...] Read more.
This study characterized the diversity of 367 barley collections from 27 different countries, including 5 control cultivars, using several phenotypic traits. Morphological traits, including spike type, grain morphology, cold damage, and lodging rate, exhibited wide variations. Eighteen accessions matured early, while four accessions had longer culm and spike lengths than the controls. The ranges of total phenolic content (TPC), β-glucan content, ABTS•+ scavenging activity, DPPH scavenging activity, and reducing power (RP) were 1.79–6.79 mg GAE/g, 0.14–8.41 g/100 g, 3.07–13.54 mg AAE/100 g, 1.56–6.24 mg AAE/g, and 1.31–7.86 mg AAE/g, respectively. Betaone, one of the controls, had the highest β-glucan content. Two accessions had β-glucan levels close to Betaone. Furthermore, 20 accessions exhibited increased TPC compared to the controls, while 5 accessions displayed elevated ABTS•+ scavenging activity. Among these, one accession also exhibited higher DPPH scavenging activity and RP simultaneously. Based on the statistical analysis of variance, all the quantitative traits were significantly affected by the difference in origin (p < 0.05). On the other hand, grain morphology significantly affected biochemical traits. Multivariate analysis classified barley accessions into eight groups, demonstrating variations in quantitative traits. There were noteworthy correlations between biochemical and agronomical traits. Overall, this study characterized several barley varieties of different origins, anticipating future genomic research. The barley accessions with superior performances could be valuable alternatives in breeding. Full article
(This article belongs to the Section Crop Physiology and Crop Production)
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13 pages, 1021 KiB  
Article
The Clinical Courses and Prognosis of Cirrhotic Patients after First Acute Decompensation: Prospective Cohort Study
by Jung Hee Kim, Sung-Eun Kim, Do Seon Song, Hee Yeon Kim, Eileen L. Yoon, Seong Hee Kang, Young-Kul Jung, Jung Hyun Kwon, Sung Won Lee, Seul Ki Han, Young Chang, Soung Won Jeong, Jeong Ju Yoo, Young-Joo Jin, Gab Jin Cheon, Byung Seok Kim, Yeon Seok Seo, Hyoungsu Kim, Ji Won Park, Tae Hyung Kim, Dong Hyun Sinn, Woo Jin Chung, Hwi Young Kim, Han Ah Lee, Seung Woo Nam, In Hee Kim, Ji Hoon Kim, Hee Bok Chae, Joo Hyun Sohn, Ju Yeon Cho, Jung Gil Park, Hyun Chin Cho, Yoon Jun Kim, Jin Mo Yang, Ki Tae Suk, Moon Young Kim, Sang Gyune Kim, Hyung Joon Yim, Won Kim, Jae-Young Jang and Dong Joon Kimadd Show full author list remove Hide full author list
Diagnostics 2024, 14(1), 14; https://doi.org/10.3390/diagnostics14010014 - 20 Dec 2023
Cited by 2 | Viewed by 2635
Abstract
Background: The European Foundation for the Study of Chronic Liver Failure (EF-CLIF) consortium suggested that the clinical courses after acute decompensation (AD) stratify the long-term prognosis: stable decompensated cirrhosis (SDC), unstable decompensated cirrhosis (UDC), pre acute-on-chronic liver failure (pre ACLF), and ACLF. However, [...] Read more.
Background: The European Foundation for the Study of Chronic Liver Failure (EF-CLIF) consortium suggested that the clinical courses after acute decompensation (AD) stratify the long-term prognosis: stable decompensated cirrhosis (SDC), unstable decompensated cirrhosis (UDC), pre acute-on-chronic liver failure (pre ACLF), and ACLF. However, previous studies included patients with a history of previous AD and had limitations associated with identifying the clinical factors related to prognosis after the first AD. Method: The prospective Korean Acute-on-Chronic Liver Failure (KACLiF) cohort included cirrhotic patients who were hospitalised with first AD between July 2015 and August 2018. We analysed the factors associated with readmission after the first AD and compared the characteristics and prognosis among each subgroup to evaluate the risk factors for the occurrence of pre ACLF after AD. Result: A total of 746 cirrhotic patients who were hospitalised with first AD were enrolled. The subgroups consisted of SDC (n = 565), UDC (n = 29), pre ACLF (n = 28), and ACLF (n = 124). Of note, pre ACLF showed a poorer prognosis than ACLF. The risk factors associated with readmission within 3 months of first AD were non-variceal gastrointestinal (GI) bleeding, hepatic encephalopathy (HE), and high MELD score. Viral aetiology was associated with the occurrence of pre ACLF compared with alcohol aetiology regardless of baseline liver function status. Conclusion: Cirrhotic patients with first AD who present as non-variceal GI bleeding and HE can easily relapse. Interestingly, the occurrence of AD with organ failure within 3 months of first AD (pre ACLF) has worse prognosis compared with the occurrence of organ failure at first AD (ACLF). In particular, cirrhotic patients with viral hepatitis with/without alcohol consumption showed poor prognosis compared to other aetiologies. Therefore, patients with ACLF after AD within 3 months should be treated more carefully and definitive treatment through LT should be considered. Full article
(This article belongs to the Section Pathology and Molecular Diagnostics)
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21 pages, 985 KiB  
Article
Postoperative Nausea and Vomiting Prediction: Machine Learning Insights from a Comprehensive Analysis of Perioperative Data
by Jong-Ho Kim, Bo-Reum Cheon, Min-Guan Kim, Sung-Mi Hwang, So-Young Lim, Jae-Jun Lee and Young-Suk Kwon
Bioengineering 2023, 10(10), 1152; https://doi.org/10.3390/bioengineering10101152 - 1 Oct 2023
Cited by 2 | Viewed by 2089
Abstract
Postoperative nausea and vomiting (PONV) are common complications after surgery. This study aimed to present the utilization of machine learning for predicting PONV and provide insights based on a large amount of data. This retrospective study included data on perioperative features of patients, [...] Read more.
Postoperative nausea and vomiting (PONV) are common complications after surgery. This study aimed to present the utilization of machine learning for predicting PONV and provide insights based on a large amount of data. This retrospective study included data on perioperative features of patients, such as patient characteristics and perioperative factors, from two hospitals. Logistic regression algorithms, random forest, light-gradient boosting machines, and multilayer perceptrons were used as machine learning algorithms to develop the models. The dataset of this study included 106,860 adult patients, with an overall incidence rate of 14.4% for PONV. The area under the receiver operating characteristic curve (AUROC) of the models was 0.60–0.67. In the prediction models that included only the known risk and mitigating factors of PONV, the AUROC of the models was 0.54–0.69. Some features were found to be associated with patient-controlled analgesia, with opioids being the most important feature in almost all models. In conclusion, machine learning provides valuable insights into PONV prediction, the selection of significant features for prediction, and feature engineering. Full article
(This article belongs to the Special Issue Artificial Intelligence in Surgery)
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