Search Results (160)

The antimicrobial activity of silver nanoparticles (AgNPs) makes them a valuable tool in various industries. Recently, biosynthesis has become the preferred method for nanoparticle synthesis, and among organisms that can be used as AgNP producers, filamentous fungi have attracted the greatest interest. In particular, wood decay fungi are considered promising candidates for AgNP biosynthesis. Biogenic AgNPs have been proven to have strong antibacterial potential and antifungal activity. The aim of this study was to evaluate the antifungal potential of AgNPs synthesized using the brown-rot decay fungus Gloeophyllum striatum DSM 9592 against four pathogenic fungal strains: Candida albicans, Malassezia furfur, Aspergillus flavus and Aspergillus fumigatus. Moreover, changes in the tested strains’ lipidome and cell membrane properties induced by the presence of AgNPs were investigated. The results revealed that the obtained AgNPs exerted fungistatic activity against all the strains tested. M. furfur, with a MIC value of 0.39 μg/mL obtained for all AgNP types, was found to be the most susceptible to the action of AgNPs. The lipidomic analysis revealed that the presence of AgNPs caused an increase in cell membrane fluidity in both A. flavus and C. albicans, and the mechanisms of response to AgNPs differed between the tested strains. Full article

México is the world’s leading producer of avocado, with 2,540,715 tons in the last year. Trametes spp. are macromycete fungi that rot wood. In 2022, in the state of Michoacán, México, sporomas of Trametes sp. were found in the trunks of avocado trees (Persea americana var. Hass) of 10 years old and older. The trees showed disease symptoms including yellowing of leaves, widespread defoliation, and wilting. It was observed that 10% of the infected trees were felled after heavy rains. In the place where the fungus settled, abundant cream-colored and cottony mycelium developed, causing “white rot”. The incidence of the disease in the sampled orchards was 60% in the tree population per hectare with 350 trees. The symptomatic trees studied were randomly selected from seven orchards. The collected fungal samples show typical structures corresponding to Trametes sp., including large sporomas, a pileus with a surface of concentric zones of various ocher tones, and a porous hymenium. The samples showed a 99% match with the species Trametes hirsuta. Laboratory bioassays of inoculation in fresh wood segments of avocado formed typical sporomas of the pathogen. Finally, the fungus was recovered and reisolated in vitro in PDA, and its identity was confirmed through the morphological characteristics and molecular tests. To the best of our knowledge, this article reports for the first time that P. americana cv. Hass and Mendez are new hosts for T. hirsuta. Therefore, the environmental and horticultural management conditions that favor the proliferation of T. hirsuta must be investigated. Full article

Wood waste, primarily composed of lignin, cellulose, and hemicellulose, which is typically disposed of through burning and crushing, poses environmental challenges. However, conventional wood waste disposal methods present critical limitations, such as environmental pollution and resource waste. To develop sustainable processing strategies to dispose wood waste, we identified two fungal isolates, SMF410-5-1 and ME1-1, from decayed wood trunks, demonstrating high lignocellulose-degrading enzyme activities, including laccase (Lac, 125.7 U/mL), manganese peroxidase (MnP, 89.3 U/mL), and lignin peroxidase (LiP, 67.9 U/mL). Isolates of ME1-1 and SMF410-5-1 both exhibited superior poplar lignin degradation, while SMF410-5-1 excelled in coniferous wood weight losses, which reached 19.7% for pine after 180 days post inoculation. Moreover, biochemical analyses revealed that isolates of ME1-1 and SMF410-5-1 accelerated the degradation by producing various lignocellulose-degrading enzymes to hydrolyze wood waste. In addition, through multi-locus phylogenetic analysis using sequences of the internal transcribed spacer (ITS), large subunit ribosomal RNA (LSU), and RNA polymerase II second largest subunit (RPB2), SMF410-5-1 and ME1-1 were identified as Phlebia formosana and Auricularia cornea, respectively. This study provides novel insights into fungal-driven biodegradation, offering eco-friendly solutions for forest waste recycling and supporting circular bioeconomy strategies. Full article

The degradation of deadwood is a vital ecological process for geochemical cycling and biodiversity conservation, with two main routes of fungal degradation: brown and white rot. Brown rot fungi cause severe destruction of wood cellulose and lead to brown and modified lignin residue. Fomitopsis pinicola is a typical brown rot fungus with a distinct host preference for coniferous trees. The mechanisms through which this fungus degrades coniferous and broadleaf wood remain poorly understood. Therefore, in this study, a 60-day cultivation experiment involving F. pinicola growing on deadwood strips of Pinus koraiensis and Betula platyphylla separately was performed. A comparative transcriptome analysis was carried out to explore the mechanisms underlying the differences in degradation, in terms of both physicochemical properties and transcriptomic data. The findings revealed that the host preference of F. pinicola resulted in the more efficient degradation of coniferous wood than broadleaf wood, accompanied by higher gene expression levels. GO enrichment analysis indicated that this preference was primarily associated with the hydrolytic enzyme family and processes related to the Fenton reaction, which is characteristic of brown rot fungi. Furthermore, the KEGG pathways showed that the DEGs were enriched in mainly included histidine metabolism, fatty acid degradation, and so on, indicating underlying carbohydrate and lipid metabolism processes. These results support P. pinicola’s strong ability to degrade the deadwood lignin of P. koraiensis, reflecting its adaptive evolution in host selection and choice of different ecological niches. Full article

Tannins, present in all plants, are the most abundant polyphenols in the world. Their potential as a raw material for modifying wood alongside furfuryl alcohol (FA) has already been demonstrated in previous studies. This study focused on using large quantities of hydrolysable tannins from chestnut (Castanea sativa) to replace as much FA as possible to chemically modify beech wood (Fagus sylvatica L.). Impregnation was carried out using different concentrations and ratios of both FA and tannins and tartaric acid as catalysts through a vacuum/atmospheric pressure cycle. Copolymerization was carried out for 24 h at 120 °C. Properties such as weight percent gain (WPG), leachability, anti-swelling efficiency (ASE), thermal stability, wettability and durability against brown rot (Coniophora puteana) and white rot (Coriolus versicolor) were analyzed and compared to a furfurylation treatment without the addition of tannins. These treatments were also chemically characterized using FTIR spectroscopy. The results showed that replacing 50% of FA mass by tannins largely increased WPG and demonstrated similar leachability and dimensional stability to standard furfurylation. Above all, the new treatment showed to have better resistance to wood-degrading fungi, in addition to improved wettability and thermal stability. Full article

Scots pine (Pinus sylvestris L.) sapwood was modified using maleic anhydride (MA) and sodium hypophosphite (SHP) to improve its durability against wood-deteriorating fungi, mechanical strength, and fire retardancy (thermal stability). The modification significantly reduced mass loss caused by wood-decaying fungi (Trametes versicolor, Rhodonia placenta, and soft rot fungi) due to the formation of cross-links between wood, MA, and SHP, which limited the moisture uptake and altered the chemical structure of wood. On the other hand, the modification did not provide improved resistance to fungi growth on the wood surface, which indicated that the modification had little impact on the accessibility of nutrients on the surface. A bending test showed that the modulus of elasticity (MOE) was not affected by the treatment, whilst the modulus of rupture (MOR) decreased to half the value of untreated wood. Thermal resistance was improved, as demonstrated by micro-scale combustion calorimeter testing, where the total heat release was halved, and the residue percentage nearly doubled. These results indicate that phosphonate protects the modified wood via the formation of a protective char layer on the surface and the formation of radical moieties. Based on the results, wood modified with MA and SHP shows potential for possible use in outdoor, non-loadbearing structures. Full article

Daldinia carpinicola is a newly identified species of wood-rotting fungi, with substantial aspects of its biology and ecological function yet to be clarified. A Nanopore third-generation sequencer was employed for de novo genome assembly to examine the genetic characteristics. The genome consisted of 35.93 Mb in 46 contigs with a scaffold N50 of 4.384 Mb. Glycoside hydrolases and activities enzymes accounted for a large proportion of the 522 identified carbohydrate-active enzymes (CAZymes), suggesting a strong wood degradation ability. Phylogenetic and comparative analysis revealed a close evolutionary relationship between D. carpinicola and D. bambusicola. D. carpinicola and Hypoxylon fragiforme exhibited significant collinear inter-species genome alignment. Based on transcriptome and metabolomic analyses, D. carpinicola showed a greater ability to utilize sucrose over sawdust as a carbon source, enhancing its growth by activating glycolysis/gluconeogenesis and the citrate cycle. However, compared with sucrose, sawdust as a carbon source activated D. carpinicola amino acid biosynthesis and the production of various secondary metabolites, including diterpenoid, indole alkaloid, folate, porphyrin, and biotin metabolism. The study establishes a theoretical basis for research and applications in biological processes, demonstrating a strategy to modulate the production of secondary metabolites by altering its carbon sources in D. carpinicola. Full article

Emerging pollutants such as organophosphate flame retardants (OPFRs) pose a critical threat to environmental and human health, while conventional wastewater treatments often fail to remove them. This study addresses this issue by evaluating the bioremediation potential of white-rot fungi for the removal of two OPFRs: tris(2-chloroethyl) phosphate (TCEP) and tributyl phosphate (TBP). Three fungal species—Ganoderma lucidum, Trametes versicolor, and Phanerochaete velutina—were screened for their degradation capabilities. Among these, G. lucidum and T. versicolor demonstrated removal efficiencies exceeding 99% for TBP, while removal rates for TCEP were significantly lower, with a maximum of 30%. The exploration of the enzyme role showed that cytochrome P450 is involved in the degradation while the extracellular laccase is not involved. Continuous batch experiments were performed using a trickle-bed reactor (TBR) operating under non-sterile conditions, a setting that closely resembles real-world wastewater treatment environments. G. lucidum was immobilized on oak wood chips, and the removal efficiencies were measured to be 85.3% and 54.8% for TBP and TCEP, respectively, over 10 cycles. Microbial community analysis showed that G. lucidum remained the dominant species in the reactor. These findings demonstrate the efficacy of fungal-based trickle-bed bioreactors, offering a sustainable and efficient alternative for addressing environmental pollution caused by highly recalcitrant pollutants. Full article

The characterization of lignocellulosic biomass present in archaeological wood is crucial for understanding the degradation processes affecting wooden artifacts. The lignocellulosic fractions in both the external and internal parts of Moroccan archaeological cedar wood (9th, 12th, and 21st centuries) were characterized using infrared spectroscopy (FTIR-ATR deconvolution mode), X-ray diffraction (XRD), and SEM analysis. The XRD demonstrates a significant reduction in the crystallinity index of cellulose from recent to aging samples. This finding is corroborated by the FTIR analysis, which shows a significant reduction in the area profiles of the C-H crystalline cellulosic bands (1374, 1315, and 1265 cm⁻¹) and C-O-C (1150–1000 cm⁻¹). The alterations in the lignin fraction of aging samples (from the 9th and 12th centuries) were demonstrated by a reduction in the intensity of the bands at 1271 and 1232 cm⁻¹ (C_ar-O) and the formation of new compounds, such as quinones and/or diaryl carbonyl structures, within the 1700–1550 cm⁻¹ range. The SEM images of cedar wood samples from the 9th and 12th centuries reveal voids, indicating that the entire cell wall component has been removed, a characteristic feature of simultaneous white rot fungi. In addition, horizontal “scratches” were noted, indicating possible bacterial activity. Full article

Wood-based particleboards (PBs) are widely used in construction and interior applications, yet their durability, particularly against biological degradation, remains a challenge. Recycling wood and incorporating degraded particles from rotted wood can potentially enhance PB sustainability and align with circular bioeconomy principles. This study investigates the biological resistance of the three-layer, laboratory-prepared PBs with varied amounts of particles, from sound spruce wood to particles, and from spruce logs attacked by brown- or white rot, respectively, to particles from recycled wooden composites of laminated particleboards (LPBs) or blockboards (BBs), i.e., 100:0, 80:20, 50:50, and 0:100. The bio-resistance of PBs was evaluated against the brown-rot fungus Coniophora puteana, as well as against a mixture of moulds’ “microscopic fungi”, such as Aspergillus versicolor BAM 8, Aspergillus niger BAM 122, Penicillium purpurogenum BAM 24, Stachybotrys chartarum BAM 32, and Rhodotorula mucilaginosa BAM 571. PBs containing particles from brown-rotten wood or from recycled wood composites, particularly LPBs, had a partly enhanced decay resistance, but their mass loss was nevertheless more than 30%. On the other hand, the mould resistance of all variants of PBs, evaluated in the 21st day, was very poor, with the highest mould growth activity (MGA = 4). These findings suggested that some types of rotten and recycled wood particles can improve the biological resistance of PBs; however, their effectiveness is influenced by the type of wood degradation and the source of recycled materials. Further, the results highlight the need for improved biocidal, chemical, or thermal modifications of wood particles to enhance the overall biological durability of PBs for specific uses. Full article

Laccase is an enzyme that plays an important role in fungi, including lignin degradation, stress defense, and formation of fruiting bodies. Auricularia auricula-judae is a white-rot fungus in the Basidiomycota phylum, capable of delignifying wood. In this study, seven genes belonging to the laccase family were identified through de novo sequencing, containing Cu-Oxidase, Cu-Oxidase_2, and Cu-Oxidase_3 domains. Subsequently, the physical characteristics, phylogenetic relationships, protein secondary structure, and tertiary structure of the laccase family (AaLac1–AaLac7) were analyzed. Prediction of N-glycosylation sites identified 2 to 10 sites in the laccase family, with AaLac7 having the highest number of sites at 10. Sequence alignment and analysis of the laccase family showed high consistency in signature sequences. Phylogenetic analysis confirmed the relationship among laccases within the family, with AaLac3–AaLac4 and AaLac5–AaLac6 being closely positioned on the tree, exhibiting high similarity in tertiary structure predictions. This study identified and analyzed laccase family genes in Auricularia auricula-judae using de novo sequencing, offering a simple method for identifying and analyzing the laccase family in organisms with unknown genetic information. Full article

Recently, in several locations in the province of Trapani (Sicily, Italy), olive growers have reported cases of decaying olive trees of cv. ‘Nocellara del Belice’, showing symptoms of defoliation, branch drying, xylem browning, and reduced production. Internal symptoms include white and brown wood rot, starting from the base of the trunk. These alterations have been observed in trees irrigated using a pipe system at the trunk with spray sprinklers. To identify the causal agents of decay, some trees were eradicated and dissected, and woody samples were processed to isolate and identify the associated fungal micro-organisms. The most common colonies were identified using morphological (macro- and microscopical observation) and molecular (PCR amplification of the rDNA-ITS region) analyses. Nine fungal taxa were identified, of which four were associated with this decay syndrome (Coriolopsis gallica, Fomitiporia mediterranea, Kirschsteiniothelia sp., and Pleurostoma richardsiae), three were considered ubiquitous and opportunistic fungi (Alternaria spp., Aspergillus amstelodami, and Trichoderma sp.), and the other two were mycelia sterilia. Artificial inoculation satisfied Koch’s postulates, confirming the pathogenicity of the aforementioned fungi, even though the infections in the fields seem to be related to the irrigation system. This hypothesis would seem to be confirmed by the progression of decay over time in the trees subjected to the irrigation system described but not reported in olive groves differently managed. It is therefore considered appropriate to conduct further and more in-depth investigations aimed at studying the correlation between the irrigation system, presence of fungal agents, and manifestation of the syndrome. A further ongoing investigation is aimed at the use of biostimulants (Agrusaver, Savory Sun, VA LLC) on symptomatic trees, with the aim of both improving the vegetative performance of the host and limiting the symptoms detected in the field. Full article

Fungi (Neolentinus lepideus, Nl, and Trametes versicolor, Tv) impart wood rot, leading to economic and environmental issues. To overcome this issue, toxic chemicals are commonly employed for wood preservation, impacting the environment and human health. Surface coatings based on antimicrobial chitosan (CS) of high molar mass (145 × 10⁵ Da) were tested as wood preservation agents using an innovative strategy involving ultra-pressurizing CS solutions to deposit organic coatings on wood samples. Before coating deposition, the antifungal activity of CS in diluted acetic acid (AcOOH) solutions was evaluated against the rot fungi models Neolentinus lepideus (Nl) and Trametes versicolor (Tv). CS effectively inhibited fungal growth, particularly in solutions with concentrations equal to or higher than 0.125 mg/mL. Wood samples (Eucalyptus sp. and Pinus sp.) were then coated with CS under ultra-pressurization at 70 bar. The polymeric coating deposition on wood was confirmed through X-ray photoelectron spectroscopy (XPS), energy dispersive X-ray spectroscopy (EDS), scanning electron microscopy (SEM) images, and water contact angle measurements. Infrared spectroscopy (FTIR) spectra of the uncoated and coated samples suggested that CS does not penetrate the bulk of the wood samples due to its high molar mass but penetrates in the surface pores, leading to its impregnation in wood samples. Coated and uncoated wood samples were exposed to fungi (Tv and Nl) for 12 weeks. In vivo testing revealed that Tv and Nl fungi did not grow on wood samples coated with CS, whereas the fungi proliferated on uncoated samples. CS of high molar mass has film-forming properties, leading to a thin hydrophobic film on the wood surface (water contact angle of 118°). This effect is mainly attributed to the high molar mass of CS and the hydrogen bonding interactions established between CS chains and cellulose. This hydrophobic film prevents water interaction, resulting in a stable coating with insignificant leaching of CS after the stability test. The CS coating can offer a sustainable strategy to prevent wood degradation, overcoming the disadvantages of toxic chemicals often used as wood preservative agents. Full article

Brown-rot fungi are large fungi that can decompose the cell walls of wood; they are notable for their secretion of diverse and complex enzymes that synergistically hydrolyze natural wood cellulose molecules. Fomitopsis pinicola (F. pinicola) is a brown-rot fungus of interest for its ability to break down the cellulose in wood efficiently. In this study, through a combination of rDNA-ITS analysis and morphological observation, the wood decay pathogen infecting Korean pine (Pinus koraiensis Siebold and Zucc.) was identified. Endoglucanase (CMCase) and β-glucosidase were quantified using the DNS (3,5-Dinitrosalicylic acid) method, and the cellulase activity was optimized using a single-factor method and orthogonal test. The results revealed that the wood-decaying fungus NE1 identified was Fomitopsis pinicola with the ITS accession number OQ880566.1. The highest cellulase activity of the strain reached 116.94 U/mL under the condition of an initial pH of 6.0, lactose 15 g·L⁻¹, KH₂PO₄ 0.5 g·L⁻¹, NH₄NO₃ 15 g·L⁻¹, MgSO₄ 0.5 g·L⁻¹, VB₁ 0.4 g·L⁻¹, inoculated two 5 mm fungal cakes in 80 mL medium volume cultured 28 °C for 5 days. This laid a foundation for improving the degradation rate of cellulose and biotransformation research, as well as exploring the degradation of cellulose by brown rot fungi. Full article

Lignocellulosic biomass is contemplated to be an inexpensive and copious feedstock that can be used for numerous industrial applications. However, lignin forms the lignin sheath and provides a physical barrier to enzymatic hydrolysis. In addition, lignin physically blocks cellulase, preventing it from being combined with the substrate in a process known as non-productive binding. Therefore, the depletion of lignin is a crucial method for obtaining fermentable sugars from the lignocellulosic biomass. Different white-rot fungi secrete different sets of lignin-mineralizing enzymes and each fungus secretes one or more of the three enzymes essential for lignin degradation. Among efficient redox enzymes, versatile peroxidase is extensively studied for its ability to degrade aromatics without the need for a mediator or polyvalent catalytic site. However, the presence of versatile peroxidase in F. spp. has not been studied. This study was planned with the objective of screening and comparing the production of versatile peroxidase enzymes from F. spp. and a standard culture of Pleurotus ostreatus MTCC-142. These fungal strains were first screened on solid media containing tannic acid, malachite green, or bromocresol green. The potency index for the tannic acid, malachite green, and bromocresol green on the 16th day of incubation was reported to be 1.28, 1.07, 1.09, and 1.10, respectively. Versatile peroxidase production patterns were investigated under solid state fermentation conditions for a period of 25 days at different temperatures ranging from 10 to 35 °C. The highest versatile peroxidase activity (592 UL⁻¹) in F. sp. was observed at 30 °C after the 7th day of incubation. The molecular confirmation showed the presence of the vp gene in F. sp. along with Pleurotus ostreatus MTCC-142. The results determined that F. sp. possesses a versatile peroxidase enzyme and is able to degrade lignin efficiently, and thus it could be utilized as an alternative to other ligninolytic enzyme-producing fungi. Full article