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17 pages, 502 KiB  
Article
Influence of Various Cooking Methods on Selenium Concentrations in Commonly Consumed Seafood Species in Thailand
by Narisa Rueangsri, Kunchit Judprasong, Piyanut Sridonpai, Nunnapus Laitip, Jörg Feldmann and Alongkote Singhato
Foods 2025, 14(15), 2700; https://doi.org/10.3390/foods14152700 - 31 Jul 2025
Viewed by 205
Abstract
Selenium (Se) is an important trace element in our body; however, food composition data remain limited due to analytical challenges and interferences. Seafood, abundant in Thailand, is recognized as a rich source of Se. This study aimed to expand knowledge on Se content [...] Read more.
Selenium (Se) is an important trace element in our body; however, food composition data remain limited due to analytical challenges and interferences. Seafood, abundant in Thailand, is recognized as a rich source of Se. This study aimed to expand knowledge on Se content in seafood prepared using traditional Thai cooking methods. Twenty seafood species were selected and prepared by boiling, frying, and grilling. Inductively Coupled Plasma–Triple Quadrupole–Mass Spectrometry (ICP-MS/MS) was used to analyze total Se contents in selected seafood species. Results revealed significant variation in Se content across species and cooking methods. The Indo-Pacific horseshoe crab showed the highest Se concentration, with fried samples reaching 193.9 μg/100 g. Se concentrations were in the range of 8.6–155.5 μg/100 g (fresh), 14.3–106.6 μg/100 g (boiled), 17.3–193.9 μg/100 g (fried), and 7.3–160.1 μg/100 g (grilled). Results found significant effects of species and cooking method on Se content (p < 0.05). Fried seafood exhibited the highest estimated marginal mean Se concentration (a 78.8 μg/100 g edible portion), significantly higher than other methods. True retention (%TR) of Se ranged from 40.4% to 100%, depending on species and method. Bigfin reef squid, wedge shell, and silver pomfret showed the highest %TR (100%), while splendid squid exhibited the lowest (52.5%). Significant interaction effects on %TR were also observed (p < 0.05). Fried seafood had the highest mean %TR (88.8%), followed by grilled (82.1%) and boiled (79.7%). These findings highlight the effects of both species and cooking method on Se retention, emphasizing the nutritional value of selected seafood in preserving bioavailable Se after cooking. Full article
(This article belongs to the Section Foods of Marine Origin)
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21 pages, 2030 KiB  
Article
Restoring Balance: Probiotic Modulation of Microbiota, Metabolism, and Inflammation in SSRI-Induced Dysbiosis Using the SHIME® Model
by Marina Toscano de Oliveira, Fellipe Lopes de Oliveira, Mateus Kawata Salgaço, Victoria Mesa, Adilson Sartoratto, Kalil Duailibi, Breno Vilas Boas Raimundo, Williams Santos Ramos and Katia Sivieri
Pharmaceuticals 2025, 18(8), 1132; https://doi.org/10.3390/ph18081132 - 29 Jul 2025
Viewed by 492
Abstract
Background/Objectives: Selective serotonin reuptake inhibitors (SSRIs), widely prescribed for anxiety disorders, may negatively impact the gut microbiota, contributing to dysbiosis. Considering the gut–brain axis’s importance in mental health, probiotics could represent an effective adjunctive strategy. This study evaluated the effects of Lactobacillus helveticus [...] Read more.
Background/Objectives: Selective serotonin reuptake inhibitors (SSRIs), widely prescribed for anxiety disorders, may negatively impact the gut microbiota, contributing to dysbiosis. Considering the gut–brain axis’s importance in mental health, probiotics could represent an effective adjunctive strategy. This study evaluated the effects of Lactobacillus helveticus R0052 and Bifidobacterium longum R0175 on microbiota composition, metabolic activity, and immune markers in fecal samples from patients with anxiety on SSRIs, using the SHIME® (Simulator of the Human Intestinal Microbial Ecosystem) model. Methods: The fecal microbiotas of four patients using sertraline or escitalopram were inoculated in SHIME® reactors simulating the ascending colon. After stabilization, a 14-day probiotic intervention was performed. Microbial composition was assessed by 16S rRNA sequencing. Short-chain fatty acids (SCFAs), ammonia, and GABA were measured, along with the prebiotic index (PI). Intestinal barrier integrity was evaluated via transepithelial electrical resistance (TEER), and cytokine levels (IL-6, IL-8, IL-10, TNF-α) were analyzed using a Caco-2/THP-1 co-culture system. The statistical design employed in this study for the analysis of prebiotic index, metabolites, intestinal barrier integrity and cytokines levels was a repeated measures ANOVA, complemented by post hoc Tukey’s tests to assess differences across treatment groups. For the 16S rRNA sequencing data, alpha diversity was assessed using multiple metrics, including the Shannon, Simpson, and Fisher indices to evaluate species diversity, and the Chao1 and ACE indices to estimate species richness. Beta diversity, which measures microbiota similarity across groups, was analyzed using weighted and unweighted UniFrac distances. To assess significant differences in beta diversity between groups, a permutational multivariate analysis of variance (PERMANOVA) was performed using the Adonis test. Results: Probiotic supplementation increased Bifidobacterium and Lactobacillus, and decreased Klebsiella and Bacteroides. Beta diversity was significantly altered, while alpha diversity remained unchanged. SCFA levels increased after 7 days. Ammonia levels dropped, and PI values rose. TEER values indicated enhanced barrier integrity. IL-8 and TNF-α decreased, while IL-6 increased. GABA levels remained unchanged. Conclusions: The probiotic combination of Lactobacillus helveticus R0052 and Bifidobacterium longum R0175 modulated gut microbiota composition, metabolic activity, and inflammatory responses in samples from individuals with anxiety on SSRIs, supporting its potential as an adjunctive strategy to mitigate antidepressant-associated dysbiosis. However, limitations—including the small pooled-donor sample, the absence of a healthy control group, and a lack of significant GABA modulation—should be considered when interpreting the findings. Although the SHIME® model is considered a gold standard for microbiota studies, further clinical trials are necessary to confirm these promising results. Full article
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19 pages, 6150 KiB  
Article
Evaluation of Eutrophication in Small Reservoirs in Northern Agricultural Areas of China
by Qianyu Jing, Yang Shao, Xiyuan Bian, Minfang Sun, Zengfei Chen, Jiamin Han, Song Zhang, Shusheng Han and Haiming Qin
Diversity 2025, 17(8), 520; https://doi.org/10.3390/d17080520 - 26 Jul 2025
Viewed by 174
Abstract
Small reservoirs have important functions, such as water resource guarantee, flood control and drought resistance, biological habitat and maintaining regional economic development. In order to better clarify the impact of agricultural activities on the nutritional status of water bodies in small reservoirs, zooplankton [...] Read more.
Small reservoirs have important functions, such as water resource guarantee, flood control and drought resistance, biological habitat and maintaining regional economic development. In order to better clarify the impact of agricultural activities on the nutritional status of water bodies in small reservoirs, zooplankton were quantitatively collected from four small reservoirs in the Jiuxianshan agricultural area of Qufu, Shandong Province, in March and October 2023, respectively. The physical and chemical parameters in sampling points were determined simultaneously. Meanwhile, water samples were collected for nutrient salt analysis, and the eutrophication of water bodies in four reservoirs was evaluated using the comprehensive nutrient status index method. The research found that the species richness of zooplankton after farming (100 species) was significantly higher than that before farming (81 species) (p < 0.05). On the contrary, the dominant species of zooplankton after farming (7 species) were significantly fewer than those before farming (11 species). The estimation results of the standing stock of zooplankton indicated that the abundance and biomass of zooplankton after farming (92.72 ind./L, 0.13 mg/L) were significantly higher than those before farming (32.51 ind./L, 0.40 mg/L) (p < 0.05). Community similarity analysis based on zooplankton abundance (ANOSIM) indicated that there were significant differences in zooplankton communities before and after farming (R = 0.329, p = 0.001). The results of multi-dimensional non-metric sorting (NMDS) showed that the communities of zooplankton could be clearly divided into two: pre-farming communities and after farming communities. The Monte Carlo test results are as follows (p < 0.05). Transparency (Trans), pH, permanganate index (CODMn), electrical conductivity (Cond) and chlorophyll a (Chl-a) had significant effects on the community structure of zooplankton before farming. Total nitrogen (TN), total phosphorus (TP) and electrical conductivity (Cond) had significant effects on the community structure of zooplankton after farming. The co-linearity network analysis based on zooplankton abundance showed that the zooplankton community before farming was more stable than that after farming. The water evaluation results based on the comprehensive nutritional status index method indicated that the water conditions of the reservoirs before farming were mostly in a mild eutrophic state, while the water conditions of the reservoirs after farming were all in a moderate eutrophic state. The results show that the nutritional status of small reservoirs in agricultural areas is significantly affected by agricultural activities. The zooplankton communities in small reservoirs underwent significant changes driven by alterations in the reservoir water environment and nutritional status. Based on the main results of this study, we suggested that the use of fertilizers and pesticides should be appropriately reduced in future agricultural activities. In order to better protect the water quality and aquatic ecology of the water reservoirs in the agricultural area. Full article
(This article belongs to the Special Issue Diversity and Ecology of Freshwater Plankton)
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27 pages, 3973 KiB  
Article
Modeling the Distribution and Richness of Mammalian Species in the Nyerere National Park, Tanzania
by Goodluck Massawe, Enrique Casas, Wilfred Marealle, Richard Lyamuya, Tiwonge I. Mzumara, Willard Mbewe and Manuel Arbelo
Remote Sens. 2025, 17(14), 2504; https://doi.org/10.3390/rs17142504 - 18 Jul 2025
Viewed by 1031
Abstract
Understanding the geographic distribution of mammal species is essential for informed conservation planning, maintaining local ecosystem stability, and addressing research gaps, particularly in data-deficient regions. This study investigated the distribution and richness of 20 mammal species within Nyerere National Park (NNP), a large [...] Read more.
Understanding the geographic distribution of mammal species is essential for informed conservation planning, maintaining local ecosystem stability, and addressing research gaps, particularly in data-deficient regions. This study investigated the distribution and richness of 20 mammal species within Nyerere National Park (NNP), a large and understudied protected area in Southern Tanzania. We applied species distribution models (SDMs) using presence data collected through ground surveys between 2022 and 2024, combined with environmental variables derived from remote sensing, including land surface temperature, vegetation indices, soil moisture, elevation, and proximity to water sources and human infrastructure. Models were constructed using the Maximum Entropy (MaxEnt) algorithm, and performance was evaluated using the Area Under the Curve (AUC) metric, yielding high accuracy ranging from 0.81 to 0.97. Temperature (32.3%) and vegetation indices (23.4%) emerged as the most influential predictors of species distributions, followed by elevation (21.7%) and proximity to water (14.5%). Species richness, estimated using a stacked SDM approach, was highest in the northern and riparian zones of the park, identifying potential biodiversity hotspots. This study presents the first fine-scale SDMs for mammal species in Nyerere National Park, offering a valuable ecological baseline to support conservation planning and promote sustainable ecotourism development in Tanzania’s southern protected areas. Full article
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19 pages, 2287 KiB  
Article
Bird Community Structure Changes as Araucaria Forest Cover Increases in the Highlands of Southeastern Brazil
by Carla Suertegaray Fontana, Lucilene Inês Jacoboski, Jonas Rafael Rodrigues Rosoni, Juliana Lopes da Silva, Filipe Augusto Pasa Bernardi, Pamela Eliana Malmoria, Christian Beier and Sandra Maria Hartz
Birds 2025, 6(3), 37; https://doi.org/10.3390/birds6030037 - 16 Jul 2025
Viewed by 844
Abstract
The Brazilian Araucaria Forest (AF) now covers only 1% of its original extent due to significant degradation, making conservation a challenge. The AF occurs in a mosaic alongside grassland and Atlantic Forest ecosystems, influencing bird species’ distribution through ecological processes. We compared the [...] Read more.
The Brazilian Araucaria Forest (AF) now covers only 1% of its original extent due to significant degradation, making conservation a challenge. The AF occurs in a mosaic alongside grassland and Atlantic Forest ecosystems, influencing bird species’ distribution through ecological processes. We compared the composition and functional diversity of the bird community along a gradient of AF cover in a protected area (Pró-Mata Private Natural Heritage Reserve) in southern Brazil. Bird sampling was conducted using MacKinnon lists along five trails with different histories of vegetation suppression, based on forest cover estimates from landscape imagery. Birds were functionally classified based on morphological and ecological traits. We recorded 191 bird species in total. We found higher bird richness in trails with less forest cover, while functional diversity responded inversely to vegetation cover. Bird species composition shifted from more open-habitat specialists to more forest specialists with the increasing forest cover and vegetation structural complexity. These findings highlight the ecological importance of maintaining vegetation heterogeneity, as vegetation mosaics enhance avian species richness and support a broader range of functional traits and ecosystem processes. We recommend the conservation of Araucaria Forest–grassland mosaics as a strategic approach to support multidimensional biodiversity and sustain key ecological functions in southern Brazil. Full article
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21 pages, 3178 KiB  
Article
Using DAP-RPA Point Cloud-Derived Metrics to Monitor Restored Tropical Forests in Brazil
by Milton Marques Fernandes, Milena Viviane Vieira de Almeida, Marcelo Brandão José, Italo Costa Costa, Diego Campana Loureiro, Márcia Rodrigues de Moura Fernandes, Gilson Fernandes da Silva, Lucas Berenger Santana and André Quintão de Almeida
Forests 2025, 16(7), 1092; https://doi.org/10.3390/f16071092 - 1 Jul 2025
Viewed by 324
Abstract
Monitoring forest structure, diversity, and biomass in restoration areas is both expensive and time-consuming. Metrics derived from digital aerial photogrammetry (DAP) may offer a cost-effective and efficient alternative for monitoring forest restoration. The main objective of this study was to use metrics derived [...] Read more.
Monitoring forest structure, diversity, and biomass in restoration areas is both expensive and time-consuming. Metrics derived from digital aerial photogrammetry (DAP) may offer a cost-effective and efficient alternative for monitoring forest restoration. The main objective of this study was to use metrics derived from digital aerial photogrammetry (DAP) point clouds obtained by remotely piloted aircraft (RPA) to estimate aboveground biomass (AGB), species diversity, and structural variables for monitoring restored secondary tropical forest areas. The study was conducted in three active and one passive forest restoration systems located in a secondary forest in Sergipe state, Brazil. A total of 2507 tree individuals from 36 plots (0.0625 ha each) were identified, and their total height (ht) and diameter at breast height (dbh) were measured in the field. Concomitantly with the field inventory, the plots were mapped using an RPA, and traditional height-based point cloud metrics and Fourier transform-derived metrics were extracted for each plot. Regression models were developed to calculate AGB, Shannon diversity index (H′), ht, dbh, and basal area (ba). Furthermore, multivariate statistical analyses were used to characterize AGB and H′ in the different restoration systems. All fitted models selected Fourier transform-based metrics. The AGB estimates showed satisfactory accuracy (R2 = 0.88; RMSE = 31.2%). The models for H′ and ba also performed well, with R2 values of 0.90 and 0.67 and RMSEs of 24.8% and 20.1%, respectively. Estimates of structural variables (dbh and ht) showed high accuracy, with RMSE values close to 10%. Metrics derived from the Fourier transform were essential for estimating AGB, species diversity, and forest structure. The DAP-RPA-derived metrics used in this study demonstrate potential for monitoring and characterizing AGB and species richness in restored tropical forest systems. Full article
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17 pages, 2182 KiB  
Article
Wildlife-Vehicle Collisions as a Threat to Vertebrate Conservation in a Southeastern Mexico Road Network
by Diana L. Buitrago-Torres, Gilberto Pozo-Montuy, Brandon Brand Buitrago-Marulanda, José Roberto Frías-Aguilar and Mauricio Antonio Mayo Merodio
Wild 2025, 2(3), 24; https://doi.org/10.3390/wild2030024 - 30 Jun 2025
Viewed by 1345
Abstract
Wildlife-vehicle collisions (WVCs) threaten biodiversity, particularly in the Gulf of Mexico, where road expansion increases habitat fragmentation. This research analyzes WVC patterns in southeastern Mexico, estimating collision rates across road types and assessing environmental factors influencing roadkill frequency. Field monitoring in 2016 and [...] Read more.
Wildlife-vehicle collisions (WVCs) threaten biodiversity, particularly in the Gulf of Mexico, where road expansion increases habitat fragmentation. This research analyzes WVC patterns in southeastern Mexico, estimating collision rates across road types and assessing environmental factors influencing roadkill frequency. Field monitoring in 2016 and 2023 recorded vertebrate roadkills along roads in Campeche, Chiapas, and Tabasco. Principal Component Analysis (PCA) and Generalized Additive Models (GAM) evaluated landscape influences on WVC occurrences. A total of 354 roadkill incidents involving 73 species of vertebrates were recorded, with mammals accounting for the highest mortality rate. Hotspots were identified along Federal Highway 259 and State Highways Balancán, Frontera-Jonuta, and Salto de Agua. Road type showed no significant effect. Land cover influenced WVCs, with cultivated forests, grasslands, and savannas showing the highest incidences. PCA identified temperature and elevation as key environmental drivers, while GAM suggested elevation had a weak but notable effect. These findings highlight the risks of road expansion in biodiversity-rich areas, where habitat fragmentation and increasing traffic intensify WVCs. Without targeted mitigation strategies, such as wildlife corridors, underpasses, and road signs, expanding infrastructure could further threaten wildlife populations by increasing roadkill rates and fragmenting habitats, particularly in ecologically sensitive landscapes like wetlands, forests, and coastal areas. Full article
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15 pages, 2174 KiB  
Article
Flowing Round the World: Water Snakes (Natricidae) Show Habitat-Related Adaptive Radiation After Dispersal to the New World
by Victoria J. Pascolutti and Kevin Arbuckle
Diversity 2025, 17(7), 449; https://doi.org/10.3390/d17070449 - 24 Jun 2025
Viewed by 371
Abstract
Adaptive radiations are characterized by increases in rates of lineage and trait evolution, typically due to the opening of new ecological opportunities such as may follow from dispersal to a new region or the evolution of a trait that allows exploitation of new [...] Read more.
Adaptive radiations are characterized by increases in rates of lineage and trait evolution, typically due to the opening of new ecological opportunities such as may follow from dispersal to a new region or the evolution of a trait that allows exploitation of new niches. This results in clades that have accumulated unusually high biological diversity within a relatively short evolutionary timespan and hence the phenomenon has attracted longstanding interest amongst evolutionary biologists. Natricidae is a family of snakes with a primarily Old World distribution but which have colonized the New World on a single occasion. This dispersal event coincides with an increased speciation rate that has led to a species-rich New World clade. Herein, we take a phylogenetic comparative approach to investigate a likely adaptive radiation of New World natricids. We first confirmed previously reported findings of a single origin (providing new ecological opportunity) coinciding with a burst of lineage diversification. We then estimate the rates of evolution for three ecologically important traits (body size and broad categories of diet and habitat) separately for New World and Old World natricids. Of these three traits, our results provide evidence that only transition rates between terrestrial and (semi-)aquatic habitats are higher in the New World clade. Taken together, this supports a scenario of an adaptive radiation in natricids primarily associated with differentiation by habitat as the clade spread across the New World following its arrival there. Considering other adaptive radiations alongside our evidence for Natricidae, we propose the hypothesis that there is a common distinction between spatially constrained ‘island’ adaptive radiations (which often diverge along trophic axes) and continental adaptive radiations, which diverge as the clade spreads across a larger spatial scale and adapts to different habitats. Full article
(This article belongs to the Special Issue Biogeography, Ecology and Conservation of Reptiles)
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21 pages, 394 KiB  
Systematic Review
The Role of African Medicinal Plants in Dermatological Treatments: A Systematic Review of Antimicrobial, Wound-Healing and Melanogenesis Inhibition
by Lubna M. S. Elmahaishi, Farzana Fisher, Ahmed Hussein and Charlene W. J. Africa
Cosmetics 2025, 12(4), 132; https://doi.org/10.3390/cosmetics12040132 - 24 Jun 2025
Viewed by 626
Abstract
Background: Medicinal plants are widely used across the globe as complementary and alternative therapies for managing various health conditions. The use of medicinal plants is a fundamental component of the African traditional healthcare system and most diverse therapeutic practices. Africa harbors a variety [...] Read more.
Background: Medicinal plants are widely used across the globe as complementary and alternative therapies for managing various health conditions. The use of medicinal plants is a fundamental component of the African traditional healthcare system and most diverse therapeutic practices. Africa harbors a variety of plant species, many of which are estimated to be endemic, making it a rich source of medicinal plants with potential relevance to human health. Aim of the study: The study aimed to review and highlight the information in the literature related to the antimicrobial activity, wound-healing activity, and melanogenesis inhibition of African medicinal plants. Methods: Following the Preferred Reporting Items for Systematic Reviews and Meta-Analyses (PRISMA 2020) guidelines, a literature search was conducted on ScienceDirect, Google Scholar, Medline Ebscohost, and PubMed, which were searched for articles published between 2018 and 2024. Due to high heterogeneity and variability in study designs, data were synthesized using a narrative approach. Result: A total of 37 studies were included. Emilia coccinea, Entada africana, Trichilia dregeana, Physalis angulata, and Prunus africana demonstrated strong wound-healing activity (100%) at concentrations between 5 and 10%. For melanogenesis inhibition, Ormocarpum trichocarpum (IC50 = 2.95 µg/mL), Limonium cercinense (IC50 = 3 µg/mL), and L. boitardii (IC50 = 5 µg/mL) showed the most potent effects. The strongest antimicrobial effects were reported for Harpagophytum procumbens (MIC = 10 µg/mL) against Staphylococcus aureus and S. epidermidis and Pistacia atlantica (MIC = 78.1 µg/mL) against Listeria monocytogenes and Candida albicans (MIC = 39 µg/mL). Conclusions: This study highlights the broad therapeutic potential of African medicinal plant extracts in addressing various health conditions, including skin infections, wound management, and skin pigmentation. While several extracts demonstrated strong bioactivity, inconsistent reporting of statistical data limited quantitative synthesis. Future studies should adopt standardized methodologies and report complete statistical outcomes to enable robust meta-analyses and support clinical translation. Full article
(This article belongs to the Section Cosmetic Dermatology)
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16 pages, 1970 KiB  
Article
Extraction of Rare Earth Elements from Idaho-Sourced Soil Through Phytomining: A Case Study in Central Idaho, USA
by Kathryn Richardson, Amin Mirkouei, Kasia Duellman, Anthony Aylward, David Zirker, Eliezer Schwarz and Ying Sun
Sustainability 2025, 17(11), 5118; https://doi.org/10.3390/su17115118 - 3 Jun 2025
Cited by 2 | Viewed by 895
Abstract
Environmentally friendly and low-emission extraction methods are needed to meet worldwide rare earth element (REE) demand. Within a greenhouse setting, this study aims to investigate the REE hyperaccumulation ability of four plant species (e.g., Phalaris arundinacea, Solanum nigrum, Phytolacca americana, [...] Read more.
Environmentally friendly and low-emission extraction methods are needed to meet worldwide rare earth element (REE) demand. Within a greenhouse setting, this study aims to investigate the REE hyperaccumulation ability of four plant species (e.g., Phalaris arundinacea, Solanum nigrum, Phytolacca americana, and Brassica juncea) and the impact of amending REE-rich soil with biochar or fertilizer and watering with citric acid solution. Harvested samples were pyrolyzed, and the resulting bio-ores were acid-digested and underwent elemental analysis to determine REE content. Amending soil with fertilizer and biochar increased bio-ore production, while plant species explained the most variation in bioaccumulation factor. The results indicate that Phalaris arundinacea achieved the highest average REE concentration of 27,940 µg/g for the targeted REEs (comprising cerium, lanthanum, neodymium, praseodymium, and yttrium) and 37,844 µg/g for total REEs. It is also found that soil amendment and plant species are critical parameters in the design and implementation of Idaho-based REE phytomining operations. The life cycle assessment study estimated that the electricity demand of the greenhouse contributed the most to GHG emissions during the greenhouse study. Within the field study, electricity demand of the pyrolysis reactor was determined to be the largest producer of GHGs. The techno-economic analysis estimated that the total cost of growing P. arundinacea for six weeks on a one-acre field area is USD 6213, including 39%, 22%, 21%, and 18% of that cost derived from cultivation, biomass processing, soil treatment with fertilizer, and pyrolysis, respectively. It is concluded that the proposed low-emission extraction pathway, which combines phytomining, drying, and pyrolysis, is a promising sustainable approach for REE extraction, especially from REE-rich soil sourced in Idaho. Full article
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17 pages, 3064 KiB  
Article
Allelopathic Potential of Artemisia absinthium and Artemisia vulgaris from Serbia: Chemical Composition and Bioactivity on Weeds
by Teodora Tojić, Tijana Đorđević, Rada Đurović-Pejčev, Milica Aćimović, Dragana Božić, Ljiljana Radivojević, Marija Sarić-Krsmanović and Sava Vrbničanin
Plants 2025, 14(11), 1663; https://doi.org/10.3390/plants14111663 - 30 May 2025
Cited by 1 | Viewed by 609
Abstract
The use of Artemisia species’ plant extracts and essential oils, which are rich in bioactive compounds (allelochemicals), could support weed management. This study focused on the chemical analysis and evaluation of the allelopathic potential of plant extracts (PEs) and essential oils (EOs) of [...] Read more.
The use of Artemisia species’ plant extracts and essential oils, which are rich in bioactive compounds (allelochemicals), could support weed management. This study focused on the chemical analysis and evaluation of the allelopathic potential of plant extracts (PEs) and essential oils (EOs) of Artemisia absinthium and A. vulgaris on the germination and early seedling growth of weeds (Amaranthus retroflexus and Setaria viridis) in vitro. The plant extract from A. vulgaris showed higher antioxidant activity (IC50 = 0.171 ± 0.01 mg/mL) and phenolic content than that from A. absinthium (IC50 = 0.263 ± 0.01 mg/mL). Chlorogenic acid was the most abundant phenol in both extracts. However, A. absinthium contained a higher amount (1.694 ± 0.081 mg/g) and exhibited a stronger inhibitory effect on the germination of A. retroflexus (EC50 = 0.54 ± 0.02%) and S. viridis (EC50 = 1.51 ± 0.07%) compared to A. vulgaris. The dominant components of A. absinthium essential oil were β-thujone (18.9%), cis-ocimene epoxide (7.88%), and bicyclogermacrene (7.04%), while the main constituents of A. vulgaris essential oil included gurjunene (10.41%), cis-crysanthenyl acetate (7.17%), and γ-humulene (6.67%). The lowest EC50 values for A. absinthium essential oil regarding seed germination and seedling length were estimated for S. viridis (0.28 ± 0.48% and 0.03 ± 0.00%, respectively), whereas A. retroflexus was the most sensitive to A. vulgaris essential oil (0.11 ± 0.04% and 0.02 ± 0.00%, respectively). All tested extracts showed allelopathic potential; however, the results indicate that the essential oils had a stronger inhibitory effect than the plant extracts. Full article
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15 pages, 3250 KiB  
Article
Genetic Structure and Optimal Population Size of Wild and Mass-Selected Silver Pomfret (Pampus argenteus) in China: The Implications for Conservation and Selection Breeding Programs
by Mengya Xiao, Haipeng Yu, Yong Deng, Weixu Jiang, Yuanwen Zhang, Minglu Gao, Cheng Zhang, Jiabao Hu, Man Zhang, Shanliang Xu, Danli Wang and Yajun Wang
Biology 2025, 14(5), 534; https://doi.org/10.3390/biology14050534 - 12 May 2025
Viewed by 394
Abstract
Pampus argenteus, a commercially significant marine species, faces genetic diversity challenges in selective breeding programs. This study implemented a comprehensive molecular strategy to evaluate genetic parameters in wild populations along China’s coast and three successive selected generations. The analysis utilized 19 highly [...] Read more.
Pampus argenteus, a commercially significant marine species, faces genetic diversity challenges in selective breeding programs. This study implemented a comprehensive molecular strategy to evaluate genetic parameters in wild populations along China’s coast and three successive selected generations. The analysis utilized 19 highly polymorphic microsatellite loci, mtCOI, and mtD-loop sequences to assess genetic structure. Compared with the wild populations, the average number of alleles (Na: 11.158–12.947), effective alleles (Ne: 5.592–6.502), observed heterozygosity (Ho: 0.626–0.665), expected heterozygosity (He: 0.777–0.796), and allele richness (Ar: 10.900–12.510) of the selected populations did not significantly decrease. In the mass selection of the three consecutive generations, the high genetic diversity of the selected population was successfully maintained. The effective population sizes of the first to third generations were estimated to be 83.7, 66.6, and 59.6, respectively. Population differentiation analysis showed minimal genetic divergence (FST = 0.0159–0.0326) with substantial gene flow, supported by clustering patterns indicating panmixia among wild populations from different geographical locations and among the selected populations. Notably, marginal decreases in diversity indices across generations suggest incipient genetic diversity decline, underscoring the imperative for systematic genetic monitoring. These findings validate the current breeding program’s efficacy in maintaining genetic variability while providing a framework for optimizing long-term selection strategies to prevent inbreeding depression. Full article
(This article belongs to the Special Issue Feature Papers in 'Conservation Biology and Biodiversity')
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18 pages, 4183 KiB  
Article
Synergistic Recruitment of Symbiotic Fungi by Potting and Scleroderma bovista Inoculation Suppresses Pathogens in Hazel Rhizosphere Microbiomes
by Cheng Peng, Yuqing Li, Hengshu Yu, Hongli He, Yunqing Cheng, Siyu Sun and Jianfeng Liu
Microorganisms 2025, 13(5), 1063; https://doi.org/10.3390/microorganisms13051063 - 2 May 2025
Viewed by 486
Abstract
This study explored how potted treatments (with and without Scleroderma bovista inoculation) shape rhizosphere microbial diversity in hazel across five soils using split-root cultivation. Three treatments (control, split-root, split-root with S. bovista) were analyzed for root growth and microbial dynamics. S. bovista [...] Read more.
This study explored how potted treatments (with and without Scleroderma bovista inoculation) shape rhizosphere microbial diversity in hazel across five soils using split-root cultivation. Three treatments (control, split-root, split-root with S. bovista) were analyzed for root growth and microbial dynamics. S. bovista inoculation consistently enhanced root parameters (number, tips) in all soils. Potted treatments (with and without S. bovista inoculation) altered microbial features (OTU/ASV), with only 0.9–3.3% of features remaining unchanged. At the class level, potting increased Agaricomycetes abundance while reducing Sordariomycetes, a trend amplified by S. bovista. Potting decreased species richness estimates (ACE and Chao1), while both treatments lowered diversity index (Shannon index). Potted treatments without S. bovista inoculation drove stronger shifts in species composition than inoculation. Findings reveal potting and S. bovista synergistically recruit symbiotic fungi via root exudates, establishing disease-suppressive communities that selectively inhibit pathotrophic fungi (particularly plant pathogen Coniothyrium and fungal parasite Cladobotryum) while roughly maintaining non-pathogenic saprotrophic microbes essential for organic matter decomposition. This work provides insights for optimizing hazel orchard management and ectomycorrhizal agent development. Full article
(This article belongs to the Section Plant Microbe Interactions)
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29 pages, 2782 KiB  
Article
Can Agriculture Conserve Biodiversity? Structural Biodiversity Analysis in a Case Study of Wild Bird Communities in Southern Europe
by Maurizio Gioiosa, Alessia Spada, Anna Rita Bernadette Cammerino, Michela Ingaramo and Massimo Monteleone
Environments 2025, 12(4), 129; https://doi.org/10.3390/environments12040129 - 20 Apr 2025
Viewed by 492
Abstract
Agriculture plays a dual role in shaping biodiversity, providing secondary habitats while posing significant threats to ecological systems through habitat fragmentation and land-use intensification. This study aims to assess the relationship between bird species composition and land-use types in Apulia, Italy. Specifically, we [...] Read more.
Agriculture plays a dual role in shaping biodiversity, providing secondary habitats while posing significant threats to ecological systems through habitat fragmentation and land-use intensification. This study aims to assess the relationship between bird species composition and land-use types in Apulia, Italy. Specifically, we investigate how different agricultural and semi-natural landscapes influence avian biodiversity and which agricultural models can have a positive impact on biodiversity. Biodiversity indices were calculated for each bird community observed. The abundance curves showed a geometric series pattern for the AGR communities, indicative of ecosystems at an early stage of ecological succession, and a lognormal distribution for the MIX and NAT communities, typical of mature communities with a more even distribution of species. Analysis of variance showed significant differences in richness and diversity between AGR and NAT sites, but not between NAT and MIX, which had the highest values. Logistic regression estimated the probability of sites belonging to the three ecosystem categories as a function of biodiversity, confirming a strong similarity between NAT and MIX. Finally, linear discriminant analysis confirmed a clear separation from AGR areas, as evidenced by the canonical components. The results highlight the importance of integrating high-diversity landscape elements and appropriate agricultural practices to mitigate biodiversity loss. Even a small increase in the naturalness of agricultural land would be sufficient to convert it from the AGR to the MIX ecosystem category, with significant biodiversity benefits. Full article
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11 pages, 2171 KiB  
Article
Comparative Mitogenomic Analyses of Psectrocladius (Diptera: Chironomidae)
by Xue-Yao Chen, Xiu-Ru Xiao, Yan Zhang, Zhi-Chao Zhang, Dong-Sheng Zhang, Zheng Liu and Xiao-Long Lin
Insects 2025, 16(4), 420; https://doi.org/10.3390/insects16040420 - 16 Apr 2025
Cited by 1 | Viewed by 461
Abstract
Psectrocladius, a genus within the species-rich subfamily Orthocladiinae (Diptera: Chironomidae), remains poorly resolved in molecular phylogenetics due to limited available molecular data. Here, we sequenced and analyzed the complete mitogenomes of five Psectrocladius species, using two Rheocricotopus species as outgroups. Our results [...] Read more.
Psectrocladius, a genus within the species-rich subfamily Orthocladiinae (Diptera: Chironomidae), remains poorly resolved in molecular phylogenetics due to limited available molecular data. Here, we sequenced and analyzed the complete mitogenomes of five Psectrocladius species, using two Rheocricotopus species as outgroups. Our results reveal that the mitogenomes of Psectrocladius are structurally conserved and retain a presumed ancestral gene order. The nucleotide composition of these newly generated mitogenomes exhibits a pronounced A + T bias, which is characteristic of typical insect mitogenomes. The substitution rates, estimated using Ka/Ks ratios, indicate that all protein-coding genes are under purifying selection. The strongest purifying selection pressure was observed in the CO1 gene, while the weakest was in the ND5 gene. Both the maximum likelihood and Bayesian inference trees consistently show the following topology: ((((P. schlienzi + P. bisetus) + P. barbimanus) + P. oligosetus) + P. aquatronus). This study provides key insights into chironomid mitogenomes and their gene properties, offering valuable reference data for future research. Full article
(This article belongs to the Section Insect Systematics, Phylogeny and Evolution)
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