Search Results (78)

The promising field of low-temperature plasma treatment, known for its non-invasive and environmentally sustainable nature, is being actively investigated for its ability to enhance germination, emergence, yield, and overall plant development in a broad spectrum of crops. For gene bank requirements, low-temperature plasma technologies can also improve germination parameters and promote the development seeds suitable for long-term storage. Seeds from four selected cultivars of wheat, oats, flax, and rapeseed stored in the gene bank for 1, 10, and 20 years were subjected to plasma treatments for 20, 25, and 30 min. The study evaluated the mean root and shoot length, root–shoot ratio, and seedling vigour index. Additionally, the malondialdehyde level, total polyphenol content, total flavonoid content, and total antioxidant capacity were analysed. Plasma treatment displayed varying effects on the morphological characteristics and antioxidant activity of the tested cultivars, which were influenced by treatment duration and cultivar. A positive effect of plasma treatment on seedling length, seedling vigour index, and root–shoot ratio was observed in flax cultivar ‘N-9/62/K3/B’ in all periods and in variants T2 and T3. Conversely, the wheat cultivar ‘Granny’ showed variable results, and the oat cultivar ‘Risto’ showed variable negative results in regards to mean root length and mean shoot length after plasma treatment. The indicators of oxidative stress and antioxidant capacity were affected in all the cultivars studied. A positive effect of plasma treatment on these indicators was observed in the wheat cultivar ‘Granny’, while flax cultivar ‘N-9/62/K3/B’ exhibited inconsistent results. While in cereals, a decrease in malondialdehyde content after plasma treatment was associated with an increase in polyphenol and flavonoid content as the treatment duration increased, small-seeded species responded somewhat differently. The rapeseed cultivar ‘Skrivenskij’ and flax cultivar ‘N-9/62/K3/B’ showed an increase in polyphenol and flavonoid content following a decrease in malondialdehyde levels. This study highlights the potential of low-temperature plasma treatment for long-term-stored seeds and its applicability to plant genetic resources. The findings emphasize the need for the further optimization of low-temperature plasma treatment conditions for different plant species and cultivars. Full article

Rapeseed (Brassica napus) is highly susceptible to waterlogging during the seedling stage; however, most of the studies on its gene expression under waterlogging stress have focused on transcriptional regulation, with little work conducted on post-transcriptional regulation to date. To elucidate this regulatory network, comparative transcriptome and miRNA analyses in the leaves and roots of rapeseed Zhongshuang11 (ZS11) were performed. Differentially expressed genes (DEGs) and miRNAs (DEmiRNAs) were identified by comparing the normal planting condition (the control group, CKT) with waterlogging treatment (WLT). DEGs identified in leaves and roots were enriched in different metabolic pathways, indicating their distinct mechanisms in response to waterlogging stress. In total, 68 and 82 DEmiRNAs were identified in leaves and roots, respectively, predicted to target 543 and 2122 DEGs in each tissue. Among these, 12 and 9 transcription factors (TFs) were exclusively targeted by DEmiRNAs in leaves and roots, respectively. Notably, six upregulated TFs in leaves were associated with the ethylene response and were predicted targets of bna-miR172 family members, and four TFs in roots participated in the ethylene response pathway. Furthermore, bna-miR169, along with novel-miR-23108 and novel-miR-42624 family members, played crucial roles in waterlogging response of rapeseed. Combining with the determination results of ethylene and jasmonic acid content, a preliminary model of miRNA-mediated gene expression regulation in rapeseed response to waterlogging stress was developed. These findings advance our understanding of transcriptional regulation under waterlogging and lay a theoretical foundation for improving rapeseed waterlogging tolerance. Full article

Plant height is an important agronomic trait that affects the establishment of the ideal plant type and yield formation of rapeseed. However, the genetic mechanism affecting plant height has not been fully elucidated. Building on previous genome-wide association studies (GWASs), we performed differential gene expression analysis using 14 shoot apex transcriptome datasets derived from materials exhibiting extreme seedling height phenotypes at the bud stage. The promoter and the first exon regions of the Glycosylphosphatidylinositol 2 gene (BnGPI2-A03) of rapeseed were identified as harboring two significant SNPs (Bn-A03-p717776 and Bn-A03-p7178917) associated with plant height. Co-expression network analysis shows that BnGPI2-A03 was associated with many hormone pathway genes, cell wall synthesis pathway genes, and transcription factor genes and formed a potential network regulating the plant height of rapeseed. To examine the function of BnGPI2-A03 on plant height in Brassica napus L., we generated transgenic plants in which BnGPI2-A03 was overexpressed using a 35 s promoter. Overexpression of BnGPI2-A03 elevated the height and main inflorescence length of the transgenic plant by an average of 17.95% and 25.92%, respectively, which showed a positive relationship with the level of BnGPI2-A03. Transcriptome sequencing analysis of the overexpressed transgenic rapeseed stem-tip tissue during the bud stage shows that BnGPI2-A03 is associated with plant cell wall synthesis and cell division pathways. The requirement of BnGPI2-A03 for plant height was further evidenced in natural germplasms by the higher expression levels of BnGPI2-A03 in the stem-tip tissue of extremely high genotypes (Hap1) relative to their ultra-short counterparts (Hap3). These discoveries highlight potential targets for the plant height genetic improvement of rapeseed in the future. Full article

Transplanting shock induced by mechanical transplanting technique in dry land has a negative effect on the growth and grain yield of rapeseed (Brassica napus L.). We hypothesized that foliar nitrogen (N) supplementation plays a positive role in improving rapeseed transplanting survival rate and yield. The aim of the study was to elucidatethe morphological and physiological mechanisms of foliar N supplementation in rapeseed responding to transplanting shock. Through a 1-year pot experiment and a 2-year field experiment, foliar N supplementation at concentrations of 0, 2.5, 5.0, and 7.5 g N m⁻² was set up to investigate the regulation of foliar N supplementation on the carbon (C) and N structure of seedlings before transplanting. Then we investigated the responses of morphological and physiological changes of shoot, root regeneration ability, transplanting survival rate, and grain yield to transplanting shock. The results showed that foliar N supplementation prior to transplanting increased the short-term activities of GS, GOGAT, and GDH, may improve the conversion of soluble sugar to soluble protein, increased N accumulation, and lowered the C:N ratio of rapeseed seedlings. Rapeseed seedlings with a low C:N ratio showed greater potential for root development after transplanting. Moreover, appropriate foliar N supplementation (2.5–5.0 g N m⁻²) not only up-regulated the positive feedback of osmoregulatory substances and antioxidant system for improving stress resistance, but also enhanced the synergistic growth of shoot and root by increasing root growth potential during transplanting shock. Therefore, the transplanting survival rate increased by 13.81–19.20%, and the grain yield increased by 25.15–30.56%. The optimal foliar N supplementation before transplanting may be used as a simple and effective agricultural measure to alleviate the negative effects of transplanting shock on rapeseed. Full article

Ascorbic acid (AsA) is an important antioxidant for human health. The concept of “oil-vegetable-duel-purpose” can significantly enhance the economic benefits of the rapeseed industry. Rapeseed, when utilized as a vegetable, serves as a valuable food source of AsA. In this study, we integrated transcriptome and metabolome analyses, along with substrate feeding, to identify the L-galactose pathway as the primary source for AsA production, which is primarily regulated by light. Through seven different photoperiod treatments from 12 h/12 h (light/dark) to 24 h/0 h, we found that AsA content increased with longer photoperiods, as well as chlorophyll, carotenoids, and soluble sugars. However, an excessively long photoperiod led to photooxidative stress, which negatively affected biomass accumulation in rapeseed seedlings and subsequently impacted the total accumulation of AsA. Furthermore, different enzymes respond differently to different photoperiods. Analysis of the correlation between the expression levels of AsA biosynthesis-related genes and AsA content highlighted a dynamic balancing mechanism of AsA metabolism in response to different photoperiods. The study revealed that the 16 h/8 h photoperiod is optimal for long-term AsA accumulation in rapeseed seedlings. However, extending the photoperiod before harvest can enhance AsA content without compromising yield. These findings offer novel insights into an effective strategy for the biofortification of AsA in rapeseed. Full article

Cold tolerance in rapeseed is closely related to its growth, yield, and geographical distribution. However, the mechanisms underlying cold resistance in rapeseed remain unclear. This study aimed to explore cold resistance genes and provide new insights into the molecular mechanisms of cold resistance in rapeseed. Rapeseed M98 (cold-sensitive line) and D1 (cold-tolerant line) were used as parental lines. In their F₂ population, 30 seedlings with the lowest cold damage levels and 30 with the highest cold damage levels were selected to construct cold-tolerant and cold-sensitive pools, respectively. The two pools and parental lines were analyzed using bulk segregant sequencing (BSA-seq). The G’-value analysis indicated a single peak on Chromosome C09 as the candidate interval, which had a 2.59 Mb segment with 69 candidate genes. Combined time-course and weighted gene co-expression network analyses were performed at seven time points to reveal the genetic basis of the two-parent response to low temperatures. Twelve differentially expressed genes primarily involved in plant cold resistance were identified. Combined BSA-seq and transcriptome analysis revealed BnaC09G0354200ZS, BnaC09G0353200ZS, and BnaC09G0356600ZS as the candidate genes. Quantitative real-time PCR validation of the candidate genes was consistent with RNA-seq. This study facilitates the exploration of cold tolerance mechanisms in rapeseed. Full article

Developing accurate, non-destructive, and automated methods for monitoring the phenotypic traits of rapeseed is crucial for improving yield and quality in modern agriculture. We used a line laser binocular stereo vision technology system to obtain the three-dimensional (3D) point cloud data of different rapeseed varieties (namely Qinyou 7, Zheyouza 108, and Huyou 039) at the seedling stage, and the phenotypic traits of rapeseed were extracted from those point clouds. After pre-processing the rapeseed point clouds with denoising and segmentation, the plant height, leaf length, leaf width, and leaf area of the rapeseed in the seedling stage were extracted by a series of algorithms and were evaluated for accuracy with the manually measured values. The following results were obtained: the R² values for plant height data between the extracted values of the 3D point cloud and the manually measured values reached 0.934, and the RMSE was 0.351 cm. Similarly, the R² values for leaf length of the three kinds of rapeseed were all greater than 0.95, and the RMSEs for Qinyou 7, Zheyouza 108, and Huyou 039 were 0.134 cm, 0.131 cm, and 0.139 cm, respectively. Regarding leaf width, R² was greater than 0.92, and the RMSEs were 0.151 cm, 0.189 cm, and 0.150 cm, respectively. Further, the R² values for leaf area were all greater than 0.98 with RMSEs of 0.296 cm², 0.231 cm² and 0.259 cm², respectively. The results extracted from the 3D point cloud are reliable and have high accuracy. These results demonstrate the potential of 3D point cloud technology for automated, non-destructive phenotypic analysis in rapeseed breeding programs, which can accelerate the development of improved varieties. Full article

Point cloud segmentation is necessary for obtaining highly precise morphological traits in plant phenotyping. Although a huge development has occurred in point cloud segmentation, the segmentation of point clouds from complex plant leaves still remains challenging. Rapeseed leaves are critical in cultivation and breeding, yet traditional two-dimensional imaging is susceptible to reduced segmentation accuracy due to occlusions between plants. The current study proposes the use of binocular stereo-vision technology to obtain three-dimensional (3D) point clouds of rapeseed leaves at the seedling and bolting stages. The point clouds were colorized based on elevation values in order to better process the 3D point cloud data and extract rapeseed phenotypic parameters. Denoising methods were selected based on the source and classification of point cloud noise. However, for ground point clouds, we combined plane fitting with pass-through filtering for denoising, while statistical filtering was used for denoising outliers generated during scanning. We found that, during the seedling stage of rapeseed, a region-growing segmentation method was helpful in finding suitable parameter thresholds for leaf segmentation, and the Locally Convex Connected Patches (LCCP) clustering method was used for leaf segmentation at the bolting stage. Furthermore, the study results show that combining plane fitting with pass-through filtering effectively removes the ground point cloud noise, while statistical filtering successfully denoises outlier noise points generated during scanning. Finally, using the region-growing algorithm during the seedling stage with a normal angle threshold set at 5.0/180.0* M_PI and a curvature threshold set at 1.5 helps to avoid the under-segmentation and over-segmentation issues, achieving complete segmentation of rapeseed seedling leaves, while the LCCP clustering method fully segments rapeseed leaves at the bolting stage. The proposed method provides insights to improve the accuracy of subsequent point cloud phenotypic parameter extraction, such as rapeseed leaf area, and is beneficial for the 3D reconstruction of rapeseed. Full article

Brassica napus is a member of the cruciferous family with rich glucosinolate (GSL) content, particularly glucobrassicin (3-indolylmethyl glucosinolate, I3M), that can be metabolized into indole-3-carbinol (I3C), a compound with promising anticancer properties. To unravel the genetic mechanism influencing I3C content in rapeseed seedlings, a comprehensive study was undertaken with a doubled haploid (DH) population. By quantitative trait loci (QTL) mapping, seven QTL that were located on A01, A07, and C04 were identified, with the most significant contribution to phenotypic variation observed on chromosome A07 (11.78%). The genes within the QTL confidence intervals (CIs) include transcription factors (TFs) and glycosyltransferases. After co-expression analysis, GSL-related regulatory network of TFs-targets was constructed and two TFs, BnaA07.ERF019 and BnaA07.NAC92, were identified as possible regulators in GSL biosynthesis. Three IGMT (glucosinolate methyltransferases) genes were found within the CIs that expressed higher in seedlings with more I3C, indicating their roles in I3C synthesis regulation. Molecular docking studies validated the binding capability of I3M to IGMTs, and those within the I3C QTL CIs have the strongest binding energy. These new discoveries offer critical insights into the genetic regulation of I3C content in rapeseed seedlings and establish a foundation for breeding high-I3C rapeseed varieties with potential health-promoting properties. Full article

Aggregate area expansion is one of the important productivity impacts of agricultural mechanization. This study aims to explore potential new paths to aggregate area expansion through new forms of agricultural mechanization and estimate the relevant effects. Targeting the rapidly developing machinery rice transplanting (MRT) and the attendant centralized rice seedling cultivation (CRSC) in rural China, this article identifies a fresh path for the adoption of machinery technology to increase aggregate crop cultivation area. By analyzing two typical cases from Jiangxi Province, we unmask the mechanism through which MRT and CRSC promote aggregate area. The results indicate that, compared with the traditional method, CRSC makes technological progress in various aspects and significantly improves the supply efficiency of seedlings and the space utilization efficiency of seedling fields. This, in turn, reduces the required seedling area per unit of paddy field and thus substitutes a lot of traditional seedling fields with few modern ones. Under the rotation cropping system, CRSC releases the farming time of the potential previous crops in the saved traditional seedling fields and then increases cropping intensity and aggregate area. In the micro case, the substitution of the traditional method with CRSC can save 0.04 hectares of seedling field by serving 1 hectare of paddy field. The macro simulation results show that CRSC can, at most, increase aggregate crop cultivation area by 1.95 million hectares nationwide, and this is equivalent to an increase of 6.21 million tons of grain and 1.86 million tons of rapeseed. Full article

Drought constitutes a noteworthy abiotic stressor, detrimentally impacting seed germination, plant development, and agricultural yield. In response to the threats imposed by climate change and water paucity, this study examined the morphological divergence and genetic governance of drought resilience traits at the germination stage in 196 rapeseed (Brassica napus L.) lines under both normal (0 MPa) and drought-induced stress (−0.8 MPa) scenarios. Our study showed that the composite drought tolerance D value is a reliable index for identifying drought resilience. Through a genome-wide association study (GWAS), we uncovered 37 significant SNP loci and 136 putative genes linked to drought tolerance based on the D value. A key discovery included the gene BnaA01g29390D (BnNCED3), encoding 9-cis-epoxycarotenoid dioxygenase, which exhibited significantly heightened expression levels in drought-resistant accessions (p < 0.01), underscoring its potential as a positive drought stress regulator and a suitable candidate for genetically enhancing drought resilience. Moreover, we pinpointed four stress-reactive transcription factors (BnaA07g26740D, BnaA07g26870D, BnaA07g26910D, and BnaA07g26980D), two E3 ubiquitin-protein ligases (BnaA05g22900D and BnaC06g28950D), two enzymes (BnaA01g29390D and BnaA03g48550D), and two photosystem-associated proteins (BnaA05g22950D and BnaC06g28840D) as vital components in drought response mechanisms. The construction of a regulatory network reveals an ABA-dependent pathway (NCED3/RGLG5/IDD14) that contributes to drought tolerance in rapeseed seedlings, alongside the involvement of a drought avoidance strategy (APRR6/PHYB). The SNPs and genes unveiled in this study offer a substantial theoretical foundation for subsequent investigations targeting genetic improvement for drought resilience during seed germination in rapeseed. Full article

Germin-like proteins (GLPs) play important roles in the regulation of various plant development processes, such as seed vigor, root and leaf development and disease resistance, while the roles of GLPs on agronomic traits are rarely studied in Brassica napus. Here, we identified GLPs family genes in rapeseed and analyzed their potential functions. There are 77 GLPs family genes (BnGLPs) in the Zhongshuang11 rapeseed reference genome, divided into a, b, c, d, e, f six subfamilies. Tissue expression profile analysis of BnGLPs revealed the following: e subfamily genes were highly expressed in early stages of silique, cotyledon, vegetative rosette and leaf development; f subfamily genes were highly expressed in seed development; genes of a subfamily were mainly expressed in the root; and genes of b, c, d subfamily exhibited low-level or no expression in above mentioned tissues. RT-qPCR analysis confirmed that the transcripts of two f subfamily members decreased dramatically during seed germination, suggesting that f subfamily proteins may play vital roles in the early stage of seed germination. Transcriptome analysis of axillary buds in sequential developing stages revealed that the transcripts of eight e subfamily genes showed a rapid increase at the beginning of shoot branching, implying that the e subfamily members played vital roles in branch development. These results demonstrate that rapeseed BnGLPs likely play essential roles in seedling development, root development and plant architecture, indicating that harnessing certain BnGLPs may contribute to the improvement of rapeseed yield. Full article

Screening the edible parts of low-cadmium (Cd) and high-nutrient crop cultivars is an effective method for reducing Cd intake and enhancing the absorption of beneficial elements for humans. In a hydroponic experiment with Cd toxicity treatment (5 μmol/L CdCl₂), we analyzed the differences in the absorption and transport characteristics of Cd and mineral nutrients in 30 rapeseed (Brassica napus L.) cultivars during the seedling stage, as well as the correlations between various elements. Firstly, Pearson correlation analysis indicated that Cd content in the shoot parts of 30 rapeseed cultivars was not correlated with the Cd uptake ability of the roots and was obviously positively correlated with the Cd translocation coefficient from root to shoot (r = 0.452 *, p < 0.05). Hierarchical clustering selected 26 cultivars with lower Cd content in the shoots, and correlation analysis of Cd and other nutrient element contents in the shoots of the 26 cultivars revealed significant negative correlations (r = −0.40 *, p < 0.05; r = −0.45 *, p < 0.05) between iron (Fe) and magnesium (Mg) content and Cd content, while potassium (K), calcium (Ca), manganese (Mn), and zinc (Zn) content had no correlation with Cd content. Then, hierarchical clustering screened 19 cultivars with higher dry weight, 4 cultivars with higher K content, 1 cultivar with higher Ca content, 8 cultivars with higher Mn content, and 3 cultivars with higher Zn content. Finally, a Venn diagram identified four superior rapeseed cultivars with lower Cd and higher nutrients in the shoots, namely, OJ114 (lower Cd, higher Mn and K content), BN365 (lower Cd, higher Mn, Fe, and Zn content), BN275 (lower Cd, higher Ca, Zn, Mn, and Fe content), and BN112 (lower Cd, higher K, Mg, Fe, and Mn content). Full article

Rapeseed is an important oil crop in the world. Wood vinegar could increase the yield and abiotic resistance of rapeseed. However, little is known about the underlying mechanisms of wood vinegar or its valid chemical components on rapeseed. In the present study, wood vinegar and butyrolactone (γ-Butyrolactone, one of the main components of wood vinegar) were applied to rapeseed at the seedling stage, and the molecular mechanisms of wood vinegar that affect rapeseed were studied by combining transcriptome and metabolomic analyses. The results show that applying wood vinegar and butyrolactone increases the biomass of rapeseed by increasing the leaf area and the number of pods per plant, and enhances the tolerance of rapeseed under low temperature by reducing membrane lipid oxidation and improving the content of chlorophyll, proline, soluble sugar, and antioxidant enzymes. Compared to the control, 681 and 700 differentially expressed genes were in the transcriptional group treated with wood vinegar and butyrolactone, respectively, and 76 and 90 differentially expressed metabolites were in the metabolic group. The combination of transcriptome and metabolomic analyses revealed the key gene-metabolic networks related to various pathways. Our research shows that after wood vinegar and butyrolactone treatment, the amino acid biosynthesis pathway of rapeseed may be involved in mediating the increase in rapeseed biomass, the proline metabolism pathway of wood vinegar treatment may be involved in mediating rapeseed’s resistance to low-temperature stress, and the sphingolipid metabolism pathway of butyrolactone treatment may be involved in mediating rapeseed’s resistance to low-temperature stress. It is suggested that the use of wood vinegar or butyrolactone are new approaches to increasing rapeseed yield and low-temperature resistance. Full article

Rapeseed is the largest self-produced oil crop in China which plays an important role in ensuring the safety of edible oil. However, its current per unit yield is far below Canada and Europe. In this study, selenium fertilizer and other micro fertilizers were sprayed on Xiangzayou 787 at the seedling stage. The results showed that the yield per plant increased 24.3% with sprayed selenium compared to the control (CK). Compared with the CK, the chlorophyll content in leaves at the flowering stage was significantly increased by 20.8%, and the soluble sugar content in the silique wall and seeds at the maturity stage was significantly increased and increased by 62.1% during the budding stage. The functional leaves of Xiangzayou 787 with the sprayed selenium fertilizer and the CK were used as raw materials for absolute quantitative transcriptome sequencing analysis. Accompanied with bioinformatics analysis, six differential genes which affect growth were discovered. The expression level of the protein phosphatase 2C gene in the silique wall was significantly higher than that of the CK. The PP2C78 gene was significantly positively correlated with the chlorophyll and soluble sugar content in leaves and the correlation coefficients were 0.539 and 0.547. According to gene expression levels, yield, and physiological indicators, PP2C78 may be a key functional gene affecting rapeseed yield. In this study, selenium fertilizer was found to be an excellent foliar fertilizer for rapeseed; the PP2C78 gene may be helpful for analyzing the yield increasing mechanism and used as a reference for screening new foliar fertilizers. Full article