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20 pages, 2104 KiB  
Article
Landscape Heterogeneity and Transition Drive Wildfire Frequency in the Central Zone of Chile
by Mariam Valladares-Castellanos, Guofan Shao and Douglass F. Jacobs
Remote Sens. 2025, 17(15), 2721; https://doi.org/10.3390/rs17152721 - 6 Aug 2025
Abstract
Wildfire regimes are closely linked to changes in landscape structure, yet the influence of accelerated land use transitions on fire activity remains poorly understood, particularly in rapidly transforming regions like central Chile. Although land use change has been extensively documented in the country, [...] Read more.
Wildfire regimes are closely linked to changes in landscape structure, yet the influence of accelerated land use transitions on fire activity remains poorly understood, particularly in rapidly transforming regions like central Chile. Although land use change has been extensively documented in the country, the specific role of the speed, extent, and spatial configuration of these transitions in shaping fire dynamics requires further investigation. To address this gap, we examined how landscape transitions influence fire frequency in central Chile, a region experiencing rapid land use change and heightened fire activity. Using multi-temporal remote sensing data, we quantified land use transitions, calculated landscape metrics to describe their spatial characteristics, and applied intensity analysis to assess their relationship with fire frequency changes. Our results show that accelerated landscape transitions significantly increased fire frequency, particularly in areas affected by forest plantation rotations, new forest establishment, and urban expansion, with changes exceeding uniform intensity expectations. Regional variations were evident: In the more densely populated northern areas, increased fire frequency was primarily linked to urban development and deforestation, while in the more rural southern regions, forest plantation cycles played a dominant role. Areas with a high number of large forest patches were especially prone to fire frequency increases. These findings demonstrate that both the speed and spatial configuration of landscape transitions are critical drivers of wildfire activity. By identifying the specific land use changes and landscape characteristics that amplify fire risks, this study provides valuable knowledge to inform fire risk reduction, landscape management, and urban planning in Chile and other fire-prone regions undergoing rapid transformation. Full article
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21 pages, 7718 KiB  
Article
Monitoring the Early Growth of Pinus and Eucalyptus Plantations Using a Planet NICFI-Based Canopy Height Model: A Case Study in Riqueza, Brazil
by Fabien H. Wagner, Fábio Marcelo Breunig, Rafaelo Balbinot, Emanuel Araújo Silva, Messias Carneiro Soares, Marco Antonio Kramm, Mayumi C. M. Hirye, Griffin Carter, Ricardo Dalagnol, Stephen C. Hagen and Sassan Saatchi
Remote Sens. 2025, 17(15), 2718; https://doi.org/10.3390/rs17152718 - 6 Aug 2025
Abstract
Monitoring the height of secondary forest regrowth is essential for assessing ecosystem recovery, but current methods rely on field surveys, airborne or UAV LiDAR, and 3D reconstruction from high-resolution UAV imagery, which are often costly or limited by logistical constraints. Here, we address [...] Read more.
Monitoring the height of secondary forest regrowth is essential for assessing ecosystem recovery, but current methods rely on field surveys, airborne or UAV LiDAR, and 3D reconstruction from high-resolution UAV imagery, which are often costly or limited by logistical constraints. Here, we address the challenge of scaling up canopy height monitoring by evaluating a recent deep learning model, trained on data from the Amazon and Atlantic Forests, developed to extract canopy height from RGB-NIR Planet NICFI imagery. The research questions are as follows: (i) How are canopy height estimates from the model affected by slope and orientation in natural forests, based on a large and well-balanced experimental design? (ii) How effectively does the model capture the growth trajectories of Pinus and Eucalyptus plantations over an eight-year period following planting? We find that the model closely tracks Pinus growth at the parcel scale, with predictions generally within one standard deviation of UAV-derived heights. For Eucalyptus, while growth is detected, the model consistently underestimates height, by more than 10 m in some cases, until late in the cycle when the canopy becomes less dense. In stable natural forests, the model reveals seasonal artifacts driven by topographic variables (slope × aspect × day of year), for which we propose strategies to reduce their influence. These results highlight the model’s potential as a cost-effective and scalable alternative to field-based and LiDAR methods, enabling broad-scale monitoring of forest regrowth and contributing to innovation in remote sensing for forest dynamics assessment. Full article
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14 pages, 5479 KiB  
Article
Assessment of Three Provenances of Juglans neotropica Diels to Identify Optimal Seed Sources in the Northern Ecuadorian Andes
by Jorge-Luis Ramírez-López, Mario Añazco, Hugo Vallejos, Carlos Arcos and Kelly Estrada
Int. J. Plant Biol. 2025, 16(3), 87; https://doi.org/10.3390/ijpb16030087 (registering DOI) - 6 Aug 2025
Abstract
Identifying optimal seed sources is critical for the propagation and restoration of Juglans neotropica Diels in the northern Ecuadorian Andes, where populations are declining due to habitat loss and overexploitation. This study evaluated the seed quality and germination performance of Juglans neotropica from [...] Read more.
Identifying optimal seed sources is critical for the propagation and restoration of Juglans neotropica Diels in the northern Ecuadorian Andes, where populations are declining due to habitat loss and overexploitation. This study evaluated the seed quality and germination performance of Juglans neotropica from three ecologically distinct provenances: a natural regeneration site (Cuyuja), a pure plantation (Natabuela), and an agroforestry system (Pimampiro). Five phenotypically superior trees were selected from each site, and germination was assessed under controlled nursery conditions over a 150-day period using a completely randomized design. Initial viability tests confirmed the physiological integrity of the seeds across all provenances. Germination onset ranged from day 55 to day 73, with significant differences in germination percentage, speed, and uniformity. The agroforestry provenance showed the highest germination rate (69%) and superior performance in all physiological indices, while natural regeneration had the lowest (15%). Post-trial viability assessments indicated that a substantial proportion of non-germinated seeds from Cuyuja remained dormant or deteriorated. These findings underscore the role of agroforestry systems in enhancing seed physiological quality and support their prioritization for large-scale propagation and ecological restoration initiatives involving Juglans neotropica. Full article
(This article belongs to the Section Plant Reproduction)
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26 pages, 1407 KiB  
Review
ZnO Nanoparticles: Advancing Agricultural Sustainability
by Lekkala Venkata Ravishankar, Nidhi Puranik, VijayaDurga V. V. Lekkala, Dakshayani Lomada, Madhava C. Reddy and Amit Kumar Maurya
Plants 2025, 14(15), 2430; https://doi.org/10.3390/plants14152430 - 5 Aug 2025
Abstract
Micronutrients play a prominent role in plant growth and development, and their bioavailability is a growing global concern. Zinc is one of the most important micronutrients in the plant life cycle, acting as a metallic cofactor for numerous biochemical reactions within plant cells. [...] Read more.
Micronutrients play a prominent role in plant growth and development, and their bioavailability is a growing global concern. Zinc is one of the most important micronutrients in the plant life cycle, acting as a metallic cofactor for numerous biochemical reactions within plant cells. Zinc deficiency in plants leads to various physiological abnormalities, ultimately affecting nutritional quality and posing challenges to food security. Biofortification methods have been adopted by agronomists to increase Zn concentrations in crops through optimal foliar and soil applications. Changing climatic conditions and conventional agricultural practices alter edaphic factors, reducing zinc bioavailability in soils due to abrupt weather changes. Precision agriculture emphasizes need-based and site-specific technologies to address these nutritional deficiencies. Nanoscience, a multidimensional approach, reduces particle size to the nanometer (nm) scale to enhance their efficiency in precise amounts. Nanoscale forms of Zn+2 and their broad applications across crops are gaining attention in agriculture under varied application methods. This review focuses on the significance of Zn oxide (ZnO) nanoparticles (ZnONPs) and their extensive application in crop production. We also discuss optimum dosage levels, ZnONPs synthesis, application methods, toxicity, and promising future strategies in this field. Full article
(This article belongs to the Special Issue Nanotechnology in Crop Physiology and Sustainable Agriculture)
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15 pages, 807 KiB  
Article
Role of Plant Growth Regulators in Adventitious Populus Tremula Root Development In Vitro
by Miglė Vaičiukynė, Jonas Žiauka, Valentinas Černiauskas and Iveta Varnagirytė-Kabašinskienė
Plants 2025, 14(15), 2427; https://doi.org/10.3390/plants14152427 - 5 Aug 2025
Abstract
Eurasian aspen (Populus tremula L.) is a tree species with recognised ecological and economic importance for both natural and plantation forests. For the fast cloning of selected aspen genotypes, the method of plant propagation through in vitro culture (micropropagation) is often recommended. [...] Read more.
Eurasian aspen (Populus tremula L.) is a tree species with recognised ecological and economic importance for both natural and plantation forests. For the fast cloning of selected aspen genotypes, the method of plant propagation through in vitro culture (micropropagation) is often recommended. The efficiency of this method is related to the use of shoot-inducing chemical growth regulators, among which cytokinins, a type of plant hormone, dominate. Although cytokinins can inhibit rooting, this effect is avoided by using cytokinin-free media. This study sought to identify concentrations and combinations of growth regulators that would stimulate one type of P. tremula organogenesis (either shoot or root formation) without inhibiting the other. The investigated growth regulators included cytokinin 6-benzylaminopurine (BAP), auxin transport inhibitor 2,3,5-triiodobenzoic acid (TIBA), auxins indole-3-acetic acid (IAA) and indole-3-butyric acid (IBA), gibberellin biosynthesis inhibitor paclobutrazol (PBZ), and a gibberellin mixture (GA4/7). Both BAP and TIBA increased shoot number per P. tremula explant and decreased the number of adventitious roots, but TIBA, in contrast to BAP, did not inhibit lateral root formation. However, for the maintenance of both adventitious shoot and root formation above the control level, the combination of PBZ and GA4/7 was shown to be especially promising. Full article
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17 pages, 826 KiB  
Review
Mechanisms and Impact of Acacia mearnsii Invasion
by Hisashi Kato-Noguchi and Midori Kato
Diversity 2025, 17(8), 553; https://doi.org/10.3390/d17080553 - 4 Aug 2025
Viewed by 69
Abstract
Acacia mearnsii De Wild. has been introduced to over 150 countries for its economic value. However, it easily escapes from plantations and establishes monospecific stands across plains, hills, valleys, and riparian habitats, including protected areas such as national parks and forest reserves. Due [...] Read more.
Acacia mearnsii De Wild. has been introduced to over 150 countries for its economic value. However, it easily escapes from plantations and establishes monospecific stands across plains, hills, valleys, and riparian habitats, including protected areas such as national parks and forest reserves. Due to its negative ecological impact, A. mearnsii has been listed among the world’s 100 worst invasive alien species. This species exhibits rapid stem growth in its sapling stage and reaches reproductive maturity early. It produces a large quantity of long-lived seeds, establishing a substantial seed bank. A. mearnsii can grow in different environmental conditions and tolerates various adverse conditions, such as low temperatures and drought. Its invasive populations are unlikely to be seriously damaged by herbivores and pathogens. Additionally, A. mearnsii exhibits allelopathic activity, though its ecological significance remains unclear. These characteristics of A. mearnsii may contribute to its expansion in introduced ranges. The presence of A. mearnsii affects abiotic processes in ecosystems by reducing water availability, increasing the risk of soil erosion and flooding, altering soil chemical composition, and obstructing solar light irradiation. The invasion negatively affects biotic processes as well, reducing the diversity and abundance of native plants and arthropods, including protective species. Eradicating invasive populations of A. mearnsii requires an integrated, long-term management approach based on an understanding of its invasive mechanisms. Early detection of invasive populations and the promotion of public awareness about their impact are also important. More attention must be given to its invasive traits because it easily escapes from cultivation. Full article
(This article belongs to the Special Issue Plant Adaptation and Survival Under Global Environmental Change)
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25 pages, 2786 KiB  
Article
Xylem Functional Anatomy of Pure-Species and Interspecific Hybrid Clones of Eucalyptus Differing in Drought Resistance
by José Gándara, Matías Nión, Silvia Ross, Jaime González-Tálice, Paolo Tabeira and María Elena Fernández
Forests 2025, 16(8), 1267; https://doi.org/10.3390/f16081267 - 2 Aug 2025
Viewed by 214
Abstract
Climate extremes threaten the resilience of Eucalyptus plantations, yet hybridization with drought-tolerant species may enhance stress tolerance. This study analyzed xylem anatomical and functional drought responses in commercial Eucalyptus grandis (GG) clones and hybrids: E. grandis × camaldulensis (GC), E. grandis × tereticornis [...] Read more.
Climate extremes threaten the resilience of Eucalyptus plantations, yet hybridization with drought-tolerant species may enhance stress tolerance. This study analyzed xylem anatomical and functional drought responses in commercial Eucalyptus grandis (GG) clones and hybrids: E. grandis × camaldulensis (GC), E. grandis × tereticornis (GT), and E. grandis × urophylla (GU1, GU2). We evaluated vessel traits (water transport), fibers (mechanical support), and wood density (D) in stems and branches. Theoretical stem hydraulic conductivity (kStheo), vessel lumen fraction (F), vessel composition (S), and associations with previous hydraulic and growth data were assessed. While general drought responses occurred, GC had the most distinct xylem profile. This may explain it having the highest performance in different irrigation conditions. Red gum hybrids (GC, GT) maintained kStheo under drought, with stable F and a narrower vessel size, especially in branches. Conversely, GG and GU2 reduced F and S; and stem kStheo declined for a similar F in these clones, indicating vascular reconfiguration aligning the stem with the branch xylem. Almost all clones increased D under drought in any organ, with the highest increase in red gum hybrids. These results reveal diverse anatomical adjustments to drought among clones, partially explaining their growth responses. Full article
(This article belongs to the Section Forest Ecophysiology and Biology)
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15 pages, 428 KiB  
Article
Biodiversity Patterns and Community Construction in Subtropical Forests Driven by Species Phylogenetic Environments
by Pengcheng Liu, Jiejie Jiao, Chuping Wu, Weizhong Shao, Xuesong Liu and Liangjin Yao
Plants 2025, 14(15), 2397; https://doi.org/10.3390/plants14152397 - 2 Aug 2025
Viewed by 487
Abstract
To explore the characteristics of species diversity and phylogenetic diversity, as well as the dominant processes of community construction, in different forest types (deciduous broad-leaved forest, mixed coniferous and broad-leaved forest, and Chinese fir plantation) in subtropical regions, analyze the specific driving patterns [...] Read more.
To explore the characteristics of species diversity and phylogenetic diversity, as well as the dominant processes of community construction, in different forest types (deciduous broad-leaved forest, mixed coniferous and broad-leaved forest, and Chinese fir plantation) in subtropical regions, analyze the specific driving patterns of soil nutrients and other environmental factors on the formation of forest diversity in different forest types, and clarify the differences in response to environmental heterogeneity between natural forests and plantation forests. Based on 48 fixed monitoring plots of 50 m × 50 m in Shouchang Forest Farm, Jiande City, Zhejiang Province, woody plants with a diameter at breast height ≥5 cm were investigated. Species diversity indices (Margalef index, Shannon–Wiener index, Simpson index, and Pielou index), phylogenetic structure index (PD), and environmental factors were used to analyze the relationship between diversity characteristics and environmental factors through variance analysis, correlation analysis, and generalized linear models. Phylogenetic structural indices (NRI and NTI) were used, combined with a random zero model, to explore the mechanisms of community construction in different forest types. Research has found that (1) the deciduous broad-leaved forest had the highest species diversity (Margalef index of 4.121 ± 1.425) and phylogenetic diversity (PD index of 21.265 ± 7.796), significantly higher than the mixed coniferous and broad-leaved forest and the Chinese fir plantation (p < 0.05); (2) there is a significant positive correlation between species richness and phylogenetic diversity, with the best fit being AIC = 70.5636 and R2 = 0.9419 in broad-leaved forests; however, the contribution of evenness is limited; (3) the specific effects of soil factors on different forest types: available phosphorus (AP) is negatively correlated with the diversity of deciduous broad-leaved forests (p < 0.05), total phosphorus (TP) promotes the diversity of coniferous and broad-leaved mixed forests, while the diversity of Chinese fir plantations is significantly negatively correlated with total nitrogen (TN); (4) the phylogenetic structure of three different forest types shows a divergent pattern in deciduous broad-leaved forests, indicating that competition and exclusion dominate the construction of deciduous broad-leaved forests; the aggregation mode of Chinese fir plantation indicates that environmental filtering dominates the construction of Chinese fir plantation; the mixed coniferous and broad-leaved forest is a transitional model, indicating that the mixed coniferous and broad-leaved forest is influenced by both stochastic processes and ecological niche processes. In different forest types in subtropical regions, the species and phylogenetic diversity of broad-leaved forests is significantly higher than in other forest types. The impact of soil nutrients on the diversity of different forest types varies, and the characteristics of community construction in different forest types are also different. This indicates the importance of protecting the original vegetation and provides a scientific basis for improving the ecological function of artificial forest ecosystems through structural adjustment. The research results have important practical guidance value for sustainable forest management and biodiversity conservation in the region. Full article
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25 pages, 1529 KiB  
Article
Native Flora and Potential Natural Vegetation References for Effective Forest Restoration in Italian Urban Systems
by Carlo Blasi, Giulia Capotorti, Eva Del Vico, Sandro Bonacquisti and Laura Zavattero
Plants 2025, 14(15), 2396; https://doi.org/10.3390/plants14152396 - 2 Aug 2025
Viewed by 177
Abstract
The ongoing decade of UN restoration matches with the European goal of bringing nature back into our lives, including in urban systems, and Nature Restoration Regulation. Within such a framework, this work is aimed at highlighting the ecological rationale and strategic value of [...] Read more.
The ongoing decade of UN restoration matches with the European goal of bringing nature back into our lives, including in urban systems, and Nature Restoration Regulation. Within such a framework, this work is aimed at highlighting the ecological rationale and strategic value of an NRRP measure devoted to forest restoration in Italian Metropolitan Cities, and at assessing respective preliminary results. Therefore, the measure’s overarching goal (not to create urban parks or gardens, but activate forest recovery), geographic extent and scope (over 4000 ha and more than 4 million planted trees and shrubs across the country), plantation model (mandatory use of native species consistent with local potential vegetation, density of 1000 seedlings per ha, use of at least four tree and four shrub species in each project, with a minimum proportion of 70% for trees, certified provenance for reproductive material), and compulsory management activities (maintenance and replacement of any dead plants for at least five years), are herein shown and explained under an ecological perspective. Current implementation outcomes were thus assessed in terms of coherence and expected biodiversity benefits, especially with respect to ecological and biogeographic consistency of planted forests, representativity in relation to national and European plant diversity, biogeographic interest and conservation concern of adopted plants, and potential contribution to the EU Habitats Directive. Compliance with international strategic goals and normative rules, along with recognizable advantages of the measure and limitations to be solved, are finally discussed. In conclusion, the forestation model proposed for the Italian Metropolitan Cities proved to be fully applicable in its ecological rationale, with expected benefits in terms of biodiversity support plainly met, and even exceeded, at the current stage of implementation, especially in terms of the contribution to protected habitats. These promising preliminary results allow the model to be recognized at the international level as a good practice that may help achieve protection targets and sustainable development goals within and beyond urban systems. Full article
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15 pages, 6769 KiB  
Article
Pine Cones in Plantations as Refuge and Substrate of Lichens and Bryophytes in the Tropical Andes
by Ángel Benítez
Diversity 2025, 17(8), 548; https://doi.org/10.3390/d17080548 - 1 Aug 2025
Viewed by 194
Abstract
Deforestation driven by plantations, such as Pinus patula Schiede ex Schltdl. et Cham., is a major cause of biodiversity and functional loss in tropical ecosystems. We assessed the diversity and composition of lichens and bryophytes in four size categories of pine cones, small [...] Read more.
Deforestation driven by plantations, such as Pinus patula Schiede ex Schltdl. et Cham., is a major cause of biodiversity and functional loss in tropical ecosystems. We assessed the diversity and composition of lichens and bryophytes in four size categories of pine cones, small (3–5 cm), medium (5.1–8 cm), large (8.1–10 cm), and very large (10.1–13 cm), with a total of 150 pine cones examined, where the occurrence and cover of lichen and bryophyte species were recorded. Identification keys based on morpho-anatomical features were used to identify lichens and bryophytes. In addition, for lichens, secondary metabolites were tested using spot reactions with potassium hydroxide, commercial bleach, and Lugol’s solution, and by examining the specimens under ultraviolet light. To evaluate the effect of pine cone size on species richness, the Kruskal–Wallis test was conducted, and species composition among cones sizes was compared using multivariate analysis. A total of 48 taxa were recorded on cones, including 41 lichens and 7 bryophytes. A total of 39 species were found on very large cones, 37 species on large cones, 35 species on medium cones, and 24 species on small cones. This is comparable to the diversity found in epiphytic communities of pine plantations. Species composition was influenced by pine cone size, differing from small in comparison with very large ones. The PERMANOVA analyses revealed that lichen and bryophyte composition varied significantly among the pine cone categories, explaining 21% of the variance. Very large cones with specific characteristics harbored different communities than those on small pine cones. The presence of lichen and bryophyte species on the pine cones from managed Ecuadorian P. patula plantations may serve as refugia for the conservation of biodiversity. Pine cones and their scales (which range from 102 to 210 per cone) may facilitate colonization of new areas by dispersal agents such as birds and rodents. The scales often harbor lichen and bryophyte propagules as well as intact thalli, which can be effectively dispersed, when the cones are moved. The prolonged presence of pine cones in the environment further enhances their role as possible dispersal substrates over extended periods. To our knowledge, this is the first study worldwide to examine pine cones as substrates for lichens and bryophytes, providing novel insights into their potential role as microhabitats within P. patula plantations and forest landscapes across both temperate and tropical zones. Full article
(This article belongs to the Section Microbial Diversity and Culture Collections)
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32 pages, 5440 KiB  
Article
Spatially Explicit Tactical Planning for Redwood Harvest Optimization Under Continuous Cover Forestry in New Zealand’s North Island
by Horacio E. Bown, Francesco Latterini, Rodolfo Picchio and Michael S. Watt
Forests 2025, 16(8), 1253; https://doi.org/10.3390/f16081253 - 1 Aug 2025
Viewed by 173
Abstract
Redwood (Sequoia sempervirens (Lamb. ex D. Don) Endl.) is a fast-growing, long-lived conifer native to a narrow coastal zone along the western seaboard of the United States. Redwood can accumulate very high amounts of carbon in plantation settings and continuous cover forestry [...] Read more.
Redwood (Sequoia sempervirens (Lamb. ex D. Don) Endl.) is a fast-growing, long-lived conifer native to a narrow coastal zone along the western seaboard of the United States. Redwood can accumulate very high amounts of carbon in plantation settings and continuous cover forestry (CCF) represents a highly profitable option, particularly for small-scale forest growers in the North Island of New Zealand. We evaluated the profitability of conceptual CCF regimes using two case study forests: Blue Mountain (109 ha, Taranaki Region, New Zealand) and Spring Creek (467 ha, Manawatu-Whanganui Region, New Zealand). We ran a strategic harvest scheduling model for both properties and used its results to guide a tactical-spatially explicit model harvesting small 0.7 ha units over a period that spanned 35 to 95 years after planting. The internal rates of return (IRRs) were 9.16 and 10.40% for Blue Mountain and Spring Creek, respectively, exceeding those considered robust for other forest species in New Zealand. The study showed that small owners could benefit from carbon revenue during the first 35 years after planting and then switch to a steady annual income from timber, maintaining a relatively constant carbon stock under a continuous cover forestry regime. Implementing adjacency constraints with a minimum green-up period of five years proved feasible. Although small coupes posed operational problems, which were linked to roading and harvesting, these issues were not insurmountable and could be managed with appropriate operational planning. Full article
(This article belongs to the Section Forest Operations and Engineering)
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13 pages, 2125 KiB  
Article
In Vitro Antagonism of Two Isolates of the Genus Trichoderma on Fusarium and Botryodiplodia sp., Pathogenic Fungi of Schizolobium parahyba in Ecuador
by Carlos Belezaca-Pinargote, Bélgica Intriago-Pinargote, Brithany Belezaca-Pinargote, Edison Solano-Apuntes, Ricardo Arturo Varela-Pardo and Paola Díaz-Navarrete
Int. J. Plant Biol. 2025, 16(3), 85; https://doi.org/10.3390/ijpb16030085 (registering DOI) - 1 Aug 2025
Viewed by 106
Abstract
A newly emerging disease affecting Schizolobium parahyba (commonly known as pachaco), termed “decline and dieback,” has been reported in association with the fungal pathogens Fusarium sp. and Botryodiplodia sp. This study assessed the antagonistic potential of two Trichoderma sp. isolates (CEP-01 and CEP-02) [...] Read more.
A newly emerging disease affecting Schizolobium parahyba (commonly known as pachaco), termed “decline and dieback,” has been reported in association with the fungal pathogens Fusarium sp. and Botryodiplodia sp. This study assessed the antagonistic potential of two Trichoderma sp. isolates (CEP-01 and CEP-02) against these phytopathogens under controlled laboratory conditions. The effects of three temperature regimes (5 ± 2 °C, 24 ± 2 °C, and 30 ± 2 °C) on the growth and inhibitory activity of two Trichoderma spp. isolates were evaluated using a completely randomized design. The first experiment included six treatments with five replicates, while the second comprised twelve treatments, also with five replicates. All assays were conducted on PDA medium. No fungal growth was observed at 5 ± 2 °C. However, at 24 ± 2 °C and 30 ± 2 °C, both isolates reached maximum growth within 72 h. At 24 ± 2 °C, both Trichoderma spp. isolates exhibited inhibitory activity against Fusarium sp. FE07 and FE08, with radial growth inhibition percentages (RGIP) ranging from 37.6% to 44.4% and 52,8% to 54.6%, respectively. When combined, the isolates achieved up to 60% inhibition against Fusarium sp., while Botryodiplodia sp. was inhibited by 40%. At 30 ± 2 °C, the antagonistic activity of Trichoderma sp. CEP-01 declined (25.6–32.4% RGIP), whereas Trichoderma sp. CEP-02 showed increased inhibition (60.3%–67.2%). The combination of isolates exhibited the highest inhibitory effect against Fusarium sp. FE07 and FE08 (68.4%–69.3%). Nonetheless, the inhibitory effect on Botryodiplodia sp. BIOT was reduced under elevated temperatures across all treatments. These findings reinforce the potential of Trichoderma spp. isolates as a viable and eco-friendly alternative for the biological control of pathogens affecting S. parahyba, contributing to more sustainable disease management practices. The observed inhibitory capacity of Trichoderma sp., especially under optimal temperature conditions, highlights its potential for application in integrated disease management programs, contributing to forest health and reducing reliance on chemical products. Full article
(This article belongs to the Section Plant–Microorganisms Interactions)
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12 pages, 1886 KiB  
Article
Methodology-Dependent Reversals in Root Decomposition: Divergent Regulation by Forest Gap and Root Order in Pinus massoniana
by Haifeng Yin, Jie Zeng, Size Liu, Yu Su, Anwei Yu and Xianwei Li
Plants 2025, 14(15), 2365; https://doi.org/10.3390/plants14152365 - 1 Aug 2025
Viewed by 201
Abstract
Understanding root decomposition dynamics is essential to address declining carbon sequestration and nutrient imbalances in monoculture plantations. This study elucidates how forest gaps regulate Pinus massoniana root decomposition through comparative methodological analysis, providing theoretical foundations for near-natural forest management and carbon–nitrogen cycle optimization [...] Read more.
Understanding root decomposition dynamics is essential to address declining carbon sequestration and nutrient imbalances in monoculture plantations. This study elucidates how forest gaps regulate Pinus massoniana root decomposition through comparative methodological analysis, providing theoretical foundations for near-natural forest management and carbon–nitrogen cycle optimization in plantations. The results showed the following: (1) Root decomposition was significantly accelerated by the in situ soil litterbag method (ISLM) versus the traditional litterbag method (LM) (decomposition rate (k) = 0.459 vs. 0.188), reducing the 95% decomposition time (T0.95) by nearly nine years (6.53 years vs. 15.95 years). ISLM concurrently elevated the root potassium concentration and reconfigured the relationships between root decomposition and soil nutrients. (2) Lower-order roots (orders 1–3) decomposed significantly faster than higher-order roots (orders 4–5) (k = 0.455 vs. 0.193). This disparity was amplified under ISLM (lower-/higher-order root k ratio = 4.1) but diminished or reversed under LM (lower-/higher-order root k ratio = 0.8). (3) Forest gaps regulated decomposition through temporal phase interactions, accelerating decomposition initially (0–360 days) while inhibiting it later (360–720 days), particularly for higher-order roots. Notably, forest gap effects fundamentally reversed between methodologies (slight promotion under LM vs. significant inhibition under ISLM). Our study reveals that conventional LM may obscure genuine ecological interactions during root decomposition, confirms lower-order roots as rapid nutrient-cycling pathways, provides crucial methodological corrections for plantation nutrient models, and advances theoretical foundations for precision management of P. massoniana plantations. Full article
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20 pages, 2586 KiB  
Article
Virome Survey of Banana Plantations and Surrounding Plants in Malawi
by Johnny Isaac Gregorio Masangwa, Coline Temple, Johan Rollin, François Maclot, Serkan Önder, Jamestone Kamwendo, Elizabeth Mwafongo, Philemon Moses, Isaac Fandika and Sebastien Massart
Viruses 2025, 17(8), 1068; https://doi.org/10.3390/v17081068 - 31 Jul 2025
Viewed by 291
Abstract
A virome survey of banana plantations and their surrounding plants was carried out at nation-wide level in Malawi using virion associated nucleic acids (VANA) high throughput sequencing (HTS) on pooled samples and appropriate alien controls. In total, 366 plants were sequenced, and 23 [...] Read more.
A virome survey of banana plantations and their surrounding plants was carried out at nation-wide level in Malawi using virion associated nucleic acids (VANA) high throughput sequencing (HTS) on pooled samples and appropriate alien controls. In total, 366 plants were sequenced, and 23 plant virus species were detected, three species on banana (275 plants) and 20 species in surrounding plants (91 plants). Two putative novel virus species; ginger tymo-like virus and pepper derived totivirus were detected and confirmed by RT-PCR on ginger and pepper. Nine known virus species and detected a host plant was identified for two of them. No viral exchange between banana and surrounding plants was observed. Results from the VANA protocol, applied to pooled banana samples, were compared with previous targeted PCR results obtained from individual banana samples. HTS test detected better BanMMV than IC-(RT)-PCR on individual samples (better inclusivity) but detected with much lower sensitivity BBTV and BSV species, often with less than 10 reads per sample. Detection of novel and known viruses and new host plants calls for strengthened sanitory and phytosanitory measures within and beyond banana production systems. Our research confirms that HTS sensitivity depends on sampling, pooling protocol and targeted virus species. Full article
(This article belongs to the Section Viruses of Plants, Fungi and Protozoa)
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25 pages, 2465 KiB  
Article
Co-Designing Sustainable and Resilient Rubber Cultivation Systems Through Participatory Research with Stakeholders in Indonesia
by Pascal Montoro, Sophia Alami, Uhendi Haris, Charloq Rosa Nababan, Fetrina Oktavia, Eric Penot, Yekti Purwestri, Suroso Rahutomo, Sabaruddin Kadir, Siti Subandiyah, Lina Fatayati Syarifa and Taryono
Sustainability 2025, 17(15), 6884; https://doi.org/10.3390/su17156884 - 29 Jul 2025
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Abstract
The rubber industry is facing major socio-economic and environmental constraints. Rubber-based agroforestry systems represent a more sustainable solution through the diversification of income and the provision of greater ecosystem services than monoculture plantations. Participative approaches are known for their ability to co-construct solutions [...] Read more.
The rubber industry is facing major socio-economic and environmental constraints. Rubber-based agroforestry systems represent a more sustainable solution through the diversification of income and the provision of greater ecosystem services than monoculture plantations. Participative approaches are known for their ability to co-construct solutions with stakeholders and to promote a positive impact on smallholders. This study therefore implemented a participatory research process with stakeholders in the natural rubber sector for the purpose of improving inclusion, relevance and impact. Facilitation training sessions were first organised with academic actors to prepare participatory workshops. A working group of stakeholder representatives was set up and participated in these workshops to share a common representation of the value chain and to identify problems and solutions for the sector in Indonesia. By fostering collective intelligence and systems thinking, the process is aimed at enabling the development of adaptive technical solutions and building capacity across the sector for future government replanting programmes. The resulting adaptive technical packages were then detailed and objectified by the academic consortium and are part of a participatory plant breeding approach adapted to the natural rubber industry. On-station and on-farm experimental plans have been set up to facilitate the drafting of projects for setting up field trials based on these outcomes. Research played a dual role as both knowledge provider and facilitator, guiding a co-learning process rooted in social inclusion, equity and ecological resilience. The initiative highlighted the potential of rubber cultivation to contribute to climate change mitigation and food sovereignty, provided that it can adapt through sustainable practices like agroforestry. Continued political and financial support is essential to sustain and scale these innovations. Full article
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