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Keywords = new approach methods (NAMs)

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11 pages, 1567 KB  
Article
Application of Chorionic Villus Sampling to Longitudinal Studies in Pregnant Non-Human Primate Models
by Sarah N. Cilvik, Michelle N. Sullivan, Theodore R. Hobbs, Jenna N. Castro, Brady M. Wessel, Henry F. Harrison and Victoria H. J. Roberts
Animals 2026, 16(3), 374; https://doi.org/10.3390/ani16030374 - 24 Jan 2026
Viewed by 70
Abstract
The rhesus macaque (Macaca mulatta) is a valuable model for pregnancy research due to its physiological similarity to humans and the ability to conduct studies in a controlled environment. Our previous work used non-invasive imaging methods to assess placental hemodynamics across [...] Read more.
The rhesus macaque (Macaca mulatta) is a valuable model for pregnancy research due to its physiological similarity to humans and the ability to conduct studies in a controlled environment. Our previous work used non-invasive imaging methods to assess placental hemodynamics across gestation with correlative tissue analysis post-delivery. Here, we expand access to longitudinal timepoints from ongoing pregnancies by obtaining placental biopsies using ultrasound-guided needle aspiration. This approach aligns with New Approach Methods (NAMs) and supports animal welfare by reducing the number of animals required. We describe a chorionic villus sampling (CVS) simulation model which facilitates training to gain proficiency in technical skills prior to performing the procedure on animals. We report outcomes from three rhesus macaques that underwent CVS three times between gestational days 40 to 106 (term: 165 days). Although biopsy samples are smaller than whole placenta, tissue yields were sufficient for multiple uses. We demonstrate (1) appropriate histology from aspirated samples, (2) good RNA quality and yield, and (3) the ability to isolate trophoblast organoids, an advancement in NAMs that reduces the need for first-trimester surgical delivery. No spontaneous preterm delivery occurred following serial CVS procedures, supporting the use of this sampling method to maximize animal utilization in longitudinal pregnancy studies. Full article
(This article belongs to the Section Animal Reproduction)
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36 pages, 6557 KB  
Review
New Knowledge About Tissue Engineering Under Microgravity Conditions in Space and on Earth
by Markus Wehland, Thomas J. Corydon, Luis Fernando González-Torres, Fatima Abdelfattah, Jayashree Sahana, Herbert Schulz, Ashwini Mushunuri, Hanna Burenkova, Simon L. Wuest, Marcus Krüger, Armin Kraus and Daniela Grimm
Int. J. Mol. Sci. 2026, 27(1), 341; https://doi.org/10.3390/ijms27010341 - 28 Dec 2025
Viewed by 727
Abstract
Microgravity (µg)-generated three-dimensional (3D) multicellular aggregates can serve as models of tissue and disease development. They are relevant in the fields of cancer and in vitro metastasis or regenerative medicine (tissue engineering). Driven by the 3R concept—replacement, reduction, and refinement of [...] Read more.
Microgravity (µg)-generated three-dimensional (3D) multicellular aggregates can serve as models of tissue and disease development. They are relevant in the fields of cancer and in vitro metastasis or regenerative medicine (tissue engineering). Driven by the 3R concept—replacement, reduction, and refinement of animal testing—µg-exposure of human cells represents a new alternative method that avoids animal experiments entirely. New Approach Methodologies (NAMs) are used in biomedical research, pharmacology, toxicology, cancer research, radiotherapy, and translational regenerative medicine. Various types of human cells grow as 3D spheroids or organoids when exposed to µg-conditions provided by µg simulating instruments on Earth. Examples for such µg-simulators are the Rotating Wall Vessel, the Random Positioning Machine, and the 2D or 3D clinostat. This review summarizes the most recent literature focusing on µg-engineered tissues. We are discussing all reports examining different tumor cell types from breast, lung, thyroid, prostate, and gastrointestinal cancers. Moreover, we are focusing on µg-generated spheroids and organoids derived from healthy cells like chondrocytes, stem cells, bone cells, endothelial cells, and cardiovascular cells. The obtained data from NAMs and µg-experiments clearly imply that they can support translational medicine on Earth. Full article
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25 pages, 863 KB  
Article
Comprehensive In Vitro Safety Assessment of Acorus calamus Rhizome Oil Using OECD-Compliant New Approach Methods: Classification as a GHS Category 1B Sensitiser and Category 2 Irritant
by Karishma R. Desai, Jay R. Ranade, Rajendra M. Nagane, Manish V. Patel, Abhay D. Deshpande, Clive S. Roper and Gireesh Babu Kantli
Toxics 2025, 13(12), 1006; https://doi.org/10.3390/toxics13121006 - 21 Nov 2025
Viewed by 1421
Abstract
Background: Acorus calamus (sweet flag) is widely used in traditional medicine, yet its dermal safety profile remains insufficiently defined under modern regulatory standards. Objective: To comprehensively evaluate the skin irritation, corrosion, and sensitisation potential of A. calamus rhizome oil using new [...] Read more.
Background: Acorus calamus (sweet flag) is widely used in traditional medicine, yet its dermal safety profile remains insufficiently defined under modern regulatory standards. Objective: To comprehensively evaluate the skin irritation, corrosion, and sensitisation potential of A. calamus rhizome oil using new approach methodologies’ (NAMs) test batteries under GLP conditions. Results: The A. calamus rhizome oil was predicted as a Category 2 skin irritant, non-corrosive and GHS Category 1B skin sensitiser. Chemical analysis revealed β-asarone as the major constituent (~40.75%). The reconstructed human epidermis models established reversible irritation without corrosion. Mechanistic concordance across the Direct Peptide Reactivity Assay, KeratinoSens™, and Human Cell Line Activation Test showed activation of the three key events of the skin sensitisation adverse outcome pathway. Using the “2-out-of-3” Defined Approach with the KE 3/1 sequential strategy allowed for hazard classification into GHS Category 1B. Quantitative risk modelling using SARA-ICE models and SCCS parameters yielded conservative safe-use concentrations ranging from 0.13 to 0.78% (w/w) for leave-on products and up to 7.46% (w/w) for rinse-off formulations. Conclusions: The combined evidence from the NAM-based assays showed that A. calamus rhizome oil is a moderate sensitiser and irritant but not corrosive, providing critical data for risk assessment and regulatory decision-making, which was previously unknown. The SARA-ICE PoD-derived safe-use concentrations provide guidance for cosmetic formulators to ensure consumer safety, particularly in leave-on applications such as face and hand creams, where sensitisation risk is highest. This study demonstrates the utility of NAMs for botanical safety assessment and regulatory decision-making. Full article
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15 pages, 814 KB  
Article
Economic Inequalities in Immunization Coverage Among One-Year-Olds and Coverage Gains from Closing the Inequality Gap in 10 Low- and Middle-Income Countries in the Western Pacific Region, 1994–2021
by Ana Mendez-Lopez, Roland Dilipkumar Hensman, Shanlong Ding and Kidong Park
Vaccines 2025, 13(10), 1032; https://doi.org/10.3390/vaccines13101032 - 3 Oct 2025
Viewed by 1983
Abstract
Background: Immunization coverage has increased substantially in the Western Pacific Region, saving millions of lives and supporting disease elimination efforts. However, gaps in coverage and inequitable vaccine access persist, leaving millions unvaccinated. Wealth-based inequalities remain a critical barrier to achieving equitable immunization coverage [...] Read more.
Background: Immunization coverage has increased substantially in the Western Pacific Region, saving millions of lives and supporting disease elimination efforts. However, gaps in coverage and inequitable vaccine access persist, leaving millions unvaccinated. Wealth-based inequalities remain a critical barrier to achieving equitable immunization coverage and maximizing the health benefits of vaccination programs. Methods: We analyzed full immunization coverage among 1-year-olds in 10 middle-income countries of the Western Pacific Region using data from the WHO Health Inequalities Data Repository. National and wealth quintile-specific coverage rates and within-country inequalities were assessed using absolute and relative measures (difference, ratio, slope index of inequality, and relative index of inequality). Trends over time were examined in countries with longitudinal data (n = 5), identifying pro-rich or pro-poor changes based on shifts in quintile-specific coverage. We also calculated the population attributable risk (PAR) and fraction (PAF) to estimate the potential increase in national coverage if wealth-based inequalities were eliminated. Findings: Substantial gaps in immunization coverage persist across all countries studied (n = 10), but with substantial between- and within-country disparities. Coverage was higher among the richest quintiles in half of the countries, with the rest showing no significant disparities. Trends in inequalities were mixed: Cambodia, Mongolia, and Viet Nam experienced pro-poor improvements over time; the Philippines saw widening pro-rich inequalities; and Lao PDR showed little change. Population attributable risks (PAR) showed that eliminating wealth-based inequalities could increase national coverage significantly in five countries (Fiji, Lao PDR, Papua New Guinea, Samoa, and Tonga), with relative gains that could increase national coverage by up to 50% while achieving equity gains. Conclusions: Addressing wealth-based inequalities in immunization could drive substantial gains in national coverage across the Western Pacific Region. Sustained, equity-oriented approaches are essential to achieving universal vaccine access and ensuring no population is left behind. Inequality patterns can guide equity-focused policies to reach underserved and disadvantaged populations. Full article
(This article belongs to the Special Issue Inequality in Immunization 2025)
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21 pages, 1631 KB  
Article
Testing Strategies for Metabolite-Mediated Neurotoxicity
by Julian Suess, Moritz Reinmoeller, Viktoria Magel, Baiba Gukalova, Edgars Liepinsh, Iain Gardner, Nadine Dreser, Anna-Katharina Holzer and Marcel Leist
Int. J. Mol. Sci. 2025, 26(17), 8338; https://doi.org/10.3390/ijms26178338 - 28 Aug 2025
Viewed by 1270
Abstract
Compounds, which rely on metabolism to exhibit toxicity, pose a challenge for next-generation risk assessment (NGRA). Since many of the currently available non-animal new approach methods (NAMs) lack metabolic activity, their use may lead to an underestimation of the true hazard to humans [...] Read more.
Compounds, which rely on metabolism to exhibit toxicity, pose a challenge for next-generation risk assessment (NGRA). Since many of the currently available non-animal new approach methods (NAMs) lack metabolic activity, their use may lead to an underestimation of the true hazard to humans (false negative predictions). We explored here strategies to deal with metabolite-mediated toxicity in assays for developmental neurotoxicity. First, we present an overview of substances that may serve as potential positive controls for metabolite-related neurotoxicity. Then, we demonstrate, using the MitoMet (UKN4b) assay, which assesses the adverse effects of chemicals on neurites of human neurons, that some metabolites have a higher toxic potency than their parent compound. Next, we designed a strategy to integrate elements of xenobiotic metabolism into assays used for (developmental) neurotoxicity testing. In the first step of this approach, hepatic post-mitochondrial fractions (S9) were used to generate metabolite mixtures (“metabolisation module”). In the second step, these were applied to a NAM (exemplified by the UKN4b assay) to identify metabolite-mediated toxicity. We demonstrate the applicability and transferability of these approaches to other assays, by an exemplary study on the basis of the cMINC (UKN2) assay, another NAM of the developmental neurotoxicity in vitro battery. Based on the experience gained from these experiments, we discuss key issues to be addressed if this approach is to be used more broadly for NAM in the NGRA context. Full article
(This article belongs to the Special Issue The Role of Neurons in Human Health and Disease—3rd Edition)
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34 pages, 7893 KB  
Review
New Horizons in Skin Sensitization Assessment of Complex Mixtures: The Use of New Approach Methodologies Beyond Regulatory Approaches
by Argel Islas-Robles, Meera Ramani, Jakeb Phillips and Gertrude-Emilia Costin
Toxics 2025, 13(8), 693; https://doi.org/10.3390/toxics13080693 - 20 Aug 2025
Cited by 2 | Viewed by 2355
Abstract
Skin sensitization is a complex biological process induced by a wide range of chemicals, from single molecules to complex mixtures and finished products. While single chemical entities were used to design and validate sophisticated safety assessment assays, complex chemistries have proven challenging to [...] Read more.
Skin sensitization is a complex biological process induced by a wide range of chemicals, from single molecules to complex mixtures and finished products. While single chemical entities were used to design and validate sophisticated safety assessment assays, complex chemistries have proven challenging to test in practice using these methods. These assays range from in silico and in chemico methods to cell-based and reconstructed tissues-based approaches and target the key events now grouped within the Adverse Outcome Pathway. We focused our analysis on the use of New Approach Methodologies for skin sensitization assessments of complex mixtures, botanicals, medical and wearable devices, agrochemicals, and pollutants. We present the defined approaches that integrate these technologies, aligning with the principles of the replacement, reduction, and refinement of animal testing. We also detail the known challenges posed by these product classes in terms of testing and data interpretation. Our analysis indicates that validated and non-validated NAMs have shown some success in predicting skin sensitization potential across the product categories reviewed. Full article
(This article belongs to the Section Novel Methods in Toxicology Research)
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20 pages, 489 KB  
Article
Development of Preliminary Candidate Surface Guidelines for Air Force-Relevant Dermal Sensitizers Using New Approach Methodologies
by Andrew J. Keebaugh, Megan L. Steele, Argel Islas-Robles, Jakeb Phillips, Allison Hilberer, Kayla Cantrell, Yaroslav G. Chushak, David R. Mattie, Rebecca A. Clewell and Elaine A. Merrill
Toxics 2025, 13(8), 660; https://doi.org/10.3390/toxics13080660 - 2 Aug 2025
Viewed by 954
Abstract
Allergic contact dermatitis (ACD) is an immunologic reaction to a dermal chemical exposure that, once triggered in an individual, will result in an allergic response following subsequent encounters with the allergen. Air Force epidemiological consultations have indicated that aircraft structural maintenance workers may [...] Read more.
Allergic contact dermatitis (ACD) is an immunologic reaction to a dermal chemical exposure that, once triggered in an individual, will result in an allergic response following subsequent encounters with the allergen. Air Force epidemiological consultations have indicated that aircraft structural maintenance workers may experience ACD at elevated rates compared to other occupations. We aimed to better understand the utility of non-animal testing methods in characterizing the sensitization potential of chemicals used during Air Force operations by evaluating the skin sensitization hazard of Air Force-relevant chemicals using new approach methodologies (NAMs) in a case study. We also evaluated the use of NAM data to develop preliminary candidate surface guidelines (PCSGs, maximum concentrations of chemicals on workplace surfaces to prevent induction of dermal sensitization) for chemicals identified as sensitizers. NAMs for assessing skin sensitization, including in silico models and experimental assays, were leveraged into an integrated approach to predict sensitization hazard for 19 chemicals. Local lymph node assay effective concentration values were predicted from NAM assay data via previously published quantitative models. The derived values were used to calculate PCSGs, which can be used to compare the presence of these chemicals on work surfaces to better understand the risk of Airmen developing ACD from occupational exposures. Full article
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21 pages, 1129 KB  
Article
Farmers’ Acceptance of Water–Fertilizer Integration Technology: Theory and Evidence
by Naihui Wang, Shuqi Zhang, Mo Li, Tianxiao Li and Yi-Jia Wang
Agriculture 2025, 15(8), 841; https://doi.org/10.3390/agriculture15080841 - 13 Apr 2025
Cited by 1 | Viewed by 1215
Abstract
The traditional rough development method for irrigation and fertilization techniques has resulted in the waste of fertilizer and water sources and the degradation of black soil. The implementation of integrated water and fertilizer technology has the potential to address these issues. However, its [...] Read more.
The traditional rough development method for irrigation and fertilization techniques has resulted in the waste of fertilizer and water sources and the degradation of black soil. The implementation of integrated water and fertilizer technology has the potential to address these issues. However, its success depends on farmers’ willingness to adopt it. This study aims to explore the incentives for farmers to adopt water and fertilizer integration technology through a practical investigation in China, revealing the driving mechanisms. The study constructed a technology adoption model and conducted a cross-sectional field study with farmers in Northeastern China. Financial consequences were incorporated into the integrated UTAUT-NAM to examine farmers’ acceptance. The validity and applicability of the model were evaluated through a partial least squares approach to structural equation modeling. The results showed that personal norms and financial consequences were the most critical factors influencing farmers’ willingness to adopt water–fertilizer integration technology. In addition, expected performance, facilitating conditions, and effort required were also significant predictors. The study further highlighted the pivotal role of awareness of consequences and responsibility in influencing farmers’ intentions to adopt the new technology, while social influence had no significant impact. The findings demonstrated that the established research model elucidated 69.1% of the observed variation in farmers’ intention to adopt water–fertilizer integration technology. The results of this study provide theoretical support for promoting water–fertilizer integration technology and inform practical strategies for its implementation. The study offers actionable insights for policymakers, agricultural advisors, and technology developers to promote resource-efficient irrigation and fertilization methods. Full article
(This article belongs to the Section Agricultural Economics, Policies and Rural Management)
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21 pages, 1266 KB  
Review
Toxicity Assessment of Organophosphate Flame Retardants Using New Approach Methodologies
by Maryam Pyambri, Joaquim Jaumot and Carmen Bedia
Toxics 2025, 13(4), 297; https://doi.org/10.3390/toxics13040297 - 11 Apr 2025
Cited by 4 | Viewed by 3934
Abstract
Organophosphate flame retardants (OPFRs) have increasingly replaced polybrominated diphenyl ethers (PBDEs) in various consumer products and raw materials, due to regulatory restrictions on PBDEs. However, concerns about the toxicity and environmental persistence of OPFRs are growing. This review summarizes current research on the [...] Read more.
Organophosphate flame retardants (OPFRs) have increasingly replaced polybrominated diphenyl ethers (PBDEs) in various consumer products and raw materials, due to regulatory restrictions on PBDEs. However, concerns about the toxicity and environmental persistence of OPFRs are growing. This review summarizes current research on the toxicity of OPFRs, with a focus on New Approach Methodologies (NAMs) that aim to eliminate the need for animal testing. NAMs, including in vitro models, omics technologies, and computational methods, provide valuable insights into the cellular and molecular effects of OPFR exposure. Evidence suggests that OPFRs may disrupt multiple organ systems, including the nervous, hepatic, pulmonary, reproductive, and endocrine systems. Additionally, the metabolic transformation of OPFRs can increase their toxicity, raising concerns about long-term exposure risks. While NAM studies provide valuable insights, further research is needed to refine risk-assessment frameworks and improve our understanding of the long-term effects of OPFR exposure, particularly at concentrations found in the environment. This new knowledge will help develop more accurate regulatory guidelines and ensure the better protection of public and environmental health. Full article
(This article belongs to the Special Issue Emerging Environmental Pollutants and Their Impact on Human Health)
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13 pages, 5778 KB  
Article
Single-Shot Wavefront Sensing in Focal Plane Imaging Using Transformer Networks
by Hangning Kou, Jingliang Gu, Jiang You, Min Wan, Zixun Ye, Zhengjiao Xiang and Xian Yue
Optics 2025, 6(1), 11; https://doi.org/10.3390/opt6010011 - 20 Mar 2025
Cited by 1 | Viewed by 1152
Abstract
Wavefront sensing is an essential technique in optical imaging, adaptive optics, and atmospheric turbulence correction. Traditional wavefront reconstruction methods, including the Gerchberg–Saxton (GS) algorithm and phase diversity (PD) techniques, are often limited by issues such as low inversion accuracy, slow convergence, and the [...] Read more.
Wavefront sensing is an essential technique in optical imaging, adaptive optics, and atmospheric turbulence correction. Traditional wavefront reconstruction methods, including the Gerchberg–Saxton (GS) algorithm and phase diversity (PD) techniques, are often limited by issues such as low inversion accuracy, slow convergence, and the presence of multiple possible solutions. Recent developments in deep learning have led to new methods, although conventional CNN-based models still face challenges in effectively capturing global context. To overcome these limitations, we propose a Transformer-based single-shot wavefront sensing method, which directly reconstructs wavefront aberrations from focal plane intensity images. Our model integrates a Normalization-based Attention Module (NAM) into the CoAtNet architecture, which strengthens feature extraction and leads to more accurate wavefront characterization. Experimental results in both simulated and real-world conditions indicate that our method achieves a 4.5% reduction in normalized wavefront error (NWE) compared to ResNet34, suggesting improved performance over conventional deep learning models. Additionally, by leveraging Walsh function modulation, our approach resolves the multiple-solution problem inherent in phase retrieval techniques. The proposed model achieves high accuracy, fast convergence, and simplicity in implementation, making it a promising solution for wavefront sensing applications. Full article
(This article belongs to the Section Engineering Optics)
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7 pages, 185 KB  
Commentary
Integrating New Approach Methodologies to Address Environmental Pancreatic Toxicity and Metabolic Disorders
by Yue Ge
Biology 2025, 14(1), 85; https://doi.org/10.3390/biology14010085 - 17 Jan 2025
Cited by 1 | Viewed by 1290
Abstract
Advancing our understanding of pancreatic toxicity and metabolic disorders caused by environmental exposures requires innovative approaches. The pancreas, a vital organ for glucose regulation, is increasingly recognized as a target of harm from environmental chemicals and dietary factors. Traditional toxicological methods, while foundational, [...] Read more.
Advancing our understanding of pancreatic toxicity and metabolic disorders caused by environmental exposures requires innovative approaches. The pancreas, a vital organ for glucose regulation, is increasingly recognized as a target of harm from environmental chemicals and dietary factors. Traditional toxicological methods, while foundational, often fail to address the mechanistic complexities of pancreatic dysfunction, particularly under real-world conditions involving multiple exposures. New Approach Methodologies (NAMs)—including high-throughput screening (HTS), OMICS technologies, computational modeling, and advanced in vitro systems—offer transformative tools to tackle these challenges. NAMs enable the identification of mechanistic pathways, improve testing efficiency, and reduce reliance on animal testing. This commentary explores the integration of NAMs into pancreatic toxicity screening, addresses critical gaps in evaluating the cumulative risks of chemical and dietary exposures, and proposes solutions for integrating the pancreas into toxicity screening through NAMs. By highlighting recent advancements and emphasizing their adoption in environmental toxicity assessment frameworks, this work demonstrates the potential of NAMs to revolutionize environmental health research, inspire interdisciplinary collaboration, and protect public health. Full article
11 pages, 3422 KB  
Article
Insights into the Metabolism, Disposition, and Quantitative Profile of mGlu5 NAM AE90015 with Metabolite Identification and a Novel Integration Method
by Zhiyang Zack Zou, Ming-Jie Han, Yu Chang and Guiying Li
Molecules 2024, 29(23), 5724; https://doi.org/10.3390/molecules29235724 - 4 Dec 2024
Viewed by 1217
Abstract
AE90015 is a highly specific and effective negative allosteric modulator (NAM) for the human mGlu5 receptor, showing significant promise for treating Parkinson’s disease. An in vivo rat oral dose study was conducted on AE90015, which involved the collection of urine and bile samples [...] Read more.
AE90015 is a highly specific and effective negative allosteric modulator (NAM) for the human mGlu5 receptor, showing significant promise for treating Parkinson’s disease. An in vivo rat oral dose study was conducted on AE90015, which involved the collection of urine and bile samples over a 24 h period. At the study’s endpoint, plasma, liver, brain, and renal tissues were also collected. A total of 30 metabolites of AE90015 were identified and structurally characterized or detected using high-resolution LC-MS/MSn. These metabolites fall into four categories: mono-hydroxyl, di-hydroxyl, mono-hydroxyl glucuronide, and di-hydroxyl glucuronide. This study provided a comprehensive overview of the metabolism, excretion, and disposition of AE90015, a promising NAM. The primary clearance pathway for AE90015 is mono-oxidation, accounting for 96% of the total, while direct excretion via renal and bile routes accounted for only 0.5%. Bile emerged as the predominant excretion route, at 65%, for metabolites and a minor amount of parent compound, which contrasts with the common assumption that urine would be the primary excretion pathway, which accounted for 26%. Each adamantyl and pyrazine moiety of AE90015 undergoes a one-time oxidation, while the pyridyl portion remains unmetabolized. Secondary metabolites, such as di-hydroxylated forms and glucuronide conjugates, do not contribute to clearance. In this work, a new quantification method combining UV and mass spectra integration was developed, allowing for the quantification of overlapping metabolite peaks. This novel approach proved to be highly effective for metabolite identification in early preclinical studies. Full article
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15 pages, 1038 KB  
Article
In Vitro Hepatic Clearance Evaluations of Per- and Polyfluoroalkyl Substances (PFAS) across Multiple Structural Categories
by David M. Crizer, Julie R. Rice, Marci G. Smeltz, Katelyn S. Lavrich, Krishna Ravindra, John F. Wambaugh, Michael DeVito and Barbara A. Wetmore
Toxics 2024, 12(9), 672; https://doi.org/10.3390/toxics12090672 - 14 Sep 2024
Cited by 8 | Viewed by 3082
Abstract
Toxicokinetic (TK) assays and in vitro–in vivo extrapolation (IVIVE) models are New Approach Methods (NAMs) used to translate in vitro points of departure to exposure estimates required to reach equivalent blood concentrations. Per- and polyfluoroalkyl substances (PFAS) are a large chemical class with [...] Read more.
Toxicokinetic (TK) assays and in vitro–in vivo extrapolation (IVIVE) models are New Approach Methods (NAMs) used to translate in vitro points of departure to exposure estimates required to reach equivalent blood concentrations. Per- and polyfluoroalkyl substances (PFAS) are a large chemical class with wide-ranging industrial applications for which only limited toxicity data are available for human health evaluation. To address the lack of TK data, a pooled primary human hepatocyte suspension model was used with targeted liquid chromatography–mass spectrometry to investigate substrate depletion for 54 PFAS. A median value of 4.52 μL/(min x million cells) was observed across those that showed significant clearance, with 35 displaying no substrate depletion. Bayesian modeling propagated uncertainty around clearance values for use in IVIVE models. Structural evaluations showed the fluorotelomer carboxylic acids were the only PFAS carboxylates showing appreciable clearance, and per- and polyfluorosulfonamides were more readily metabolized than other PFAS sulfonates. Biotransformation product prediction, using the chemical transformation simulator, suggested hydrolysis of PFAS sulfonamides to more stable sulfonic acids, which is an important consideration for exposure modeling. This effort greatly expands the PFAS in vitro toxicokinetic dataset, enabling refined TK modeling, in silico tool development, and NAM-based human health evaluations across this important set of emerging contaminants. Full article
(This article belongs to the Special Issue PFAS Toxicology and Metabolism)
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18 pages, 1206 KB  
Article
Increasing Accessibility of Bayesian Network-Based Defined Approaches for Skin Sensitisation Potency Assessment
by Tomaz Mohoric, Anke Wilm, Stefan Onken, Andrii Milovich, Artem Logavoch, Pascal Ankli, Ghada Tagorti, Johannes Kirchmair, Andreas Schepky, Jochen Kühnl, Abdulkarim Najjar, Barry Hardy and Johanna Ebmeyer
Toxics 2024, 12(9), 666; https://doi.org/10.3390/toxics12090666 - 12 Sep 2024
Cited by 3 | Viewed by 2195
Abstract
Skin sensitisation is a critical adverse effect assessed to ensure the safety of compounds and materials exposed to the skin. Alongside the development of new approach methodologies (NAMs), defined approaches (DAs) have been established to promote skin sensitisation potency assessment by adopting and [...] Read more.
Skin sensitisation is a critical adverse effect assessed to ensure the safety of compounds and materials exposed to the skin. Alongside the development of new approach methodologies (NAMs), defined approaches (DAs) have been established to promote skin sensitisation potency assessment by adopting and integrating standardised in vitro, in chemico, and in silico methods with specified data analysis procedures to achieve reliable and reproducible predictions. The incorporation of additional NAMs could help increase accessibility and flexibility. Using superior algorithms may help improve the accuracy of hazard and potency assessment and build confidence in the results. Here, we introduce two new DA models, with the aim to build DAs on freely available software and the newly developed kDPRA for covalent binding of a chemical to skin peptides and proteins. The new DA models are built on an existing Bayesian network (BN) modelling approach and expand on it. The new DA models include kDPRA data as one of the in vitro parameters and utilise in silico inputs from open-source QSAR models. Both approaches perform at least on par with the existing BN DA and show 63% and 68% accuracy when predicting four LLNA potency classes, respectively. We demonstrate the value of the Bayesian network’s confidence indications for predictions, as they provide a measure for differentiating between highly accurate and reliable predictions (accuracies up to 87%) in contrast to low-reliability predictions associated with inaccurate predictions. Full article
(This article belongs to the Special Issue Skin Sensitization Testing Using New Approach Methodologies)
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17 pages, 3344 KB  
Article
A High-Throughput Method for Quantifying Drosophila Fecundity
by Andreana Gomez, Sergio Gonzalez, Ashwini Oke, Jiayu Luo, Johnny B. Duong, Raymond M. Esquerra, Thomas Zimmerman, Sara Capponi, Jennifer C. Fung and Todd G. Nystul
Toxics 2024, 12(9), 658; https://doi.org/10.3390/toxics12090658 - 9 Sep 2024
Cited by 4 | Viewed by 3020
Abstract
The fruit fly, Drosophila melanogaster, is an experimentally tractable model system that has recently emerged as a powerful “new approach methodology” (NAM) for chemical safety testing. As oogenesis is well conserved at the molecular and cellular level, measurements of Drosophila fecundity can [...] Read more.
The fruit fly, Drosophila melanogaster, is an experimentally tractable model system that has recently emerged as a powerful “new approach methodology” (NAM) for chemical safety testing. As oogenesis is well conserved at the molecular and cellular level, measurements of Drosophila fecundity can be useful for identifying chemicals that affect reproductive health across species. However, standard Drosophila fecundity assays have been difficult to perform in a high-throughput manner because experimental factors such as the physiological state of the flies and environmental cues must be carefully controlled to achieve consistent results. In addition, exposing flies to a large number of different experimental conditions (such as chemical additives in the diet) and manually counting the number of eggs laid to determine the impact on fecundity is time-consuming. We have overcome these challenges by combining a new multiwell fly culture strategy with a novel 3D-printed fly transfer device to rapidly and accurately transfer flies from one plate to another, the RoboCam, a low-cost, custom-built robotic camera to capture images of the wells automatically, and an image segmentation pipeline to automatically identify and quantify eggs. We show that this method is compatible with robust and consistent egg laying throughout the assay period and demonstrate that the automated pipeline for quantifying fecundity is very accurate (r2 = 0.98 for the correlation between the automated egg counts and the ground truth). In addition, we show that this method can be used to efficiently detect the effects on fecundity induced by dietary exposure to chemicals. Taken together, this strategy substantially increases the efficiency and reproducibility of high-throughput egg-laying assays that require exposing flies to multiple different media conditions. Full article
(This article belongs to the Special Issue Feature Papers in the Novel Methods in Toxicology Research)
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