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Keywords = microphotography

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8 pages, 2266 KiB  
Data Descriptor
Towards a Taxonomy Machine: A Training Set of 5.6 Million Arthropod Images
by Dirk Steinke, Sujeevan Ratnasingham, Jireh Agda, Hamzah Ait Boutou, Isaiah C. H. Box, Mary Boyle, Dean Chan, Corey Feng, Scott C. Lowe, Jaclyn T. A. McKeown, Joschka McLeod, Alan Sanchez, Ian Smith, Spencer Walker, Catherine Y.-Y. Wei and Paul D. N. Hebert
Data 2024, 9(11), 122; https://doi.org/10.3390/data9110122 - 25 Oct 2024
Cited by 4 | Viewed by 11268
Abstract
The taxonomic identification of organisms from images is an active research area within the machine learning community. Current algorithms are very effective for object recognition and discrimination, but they require extensive training datasets to generate reliable assignments. This study releases 5.6 million images [...] Read more.
The taxonomic identification of organisms from images is an active research area within the machine learning community. Current algorithms are very effective for object recognition and discrimination, but they require extensive training datasets to generate reliable assignments. This study releases 5.6 million images with representatives from 10 arthropod classes and 26 insect orders. All images were taken using a Keyence VHX-7000 Digital Microscope system with an automatic stage to permit high-resolution (4K) microphotography. Providing phenotypic data for 324,000 species derived from 48 countries, this release represents, by far, the largest dataset of standardized arthropod images. As such, this dataset is well suited for testing the efficacy of machine learning algorithms for identifying specimens into higher taxonomic categories. Full article
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26 pages, 10776 KiB  
Article
Data-Driven Classification and Logging Prediction of Mudrock Lithofacies Using Machine Learning: Shale Oil Reservoirs in the Eocene Shahejie Formation, Bonan Sag, Bohai Bay Basin, Eastern China
by Qiuhong Chang, Zhuang Ruan, Bingsong Yu, Chenyang Bai, Yanli Fu and Gaofeng Hou
Minerals 2024, 14(4), 370; https://doi.org/10.3390/min14040370 - 31 Mar 2024
Cited by 5 | Viewed by 1368
Abstract
As the world’s energy demand continues to expand, shale oil has a substantial influence on the global energy reserves. The third submember of the Mbr 3 of the Shahejie Fm, characterized by complicated mudrock lithofacies, is one of the significant shale oil enrichment [...] Read more.
As the world’s energy demand continues to expand, shale oil has a substantial influence on the global energy reserves. The third submember of the Mbr 3 of the Shahejie Fm, characterized by complicated mudrock lithofacies, is one of the significant shale oil enrichment intervals of the Bohai Bay Basin. The classification and identification of lithofacies are key to shale oil exploration and development. However, the efficiency and reliability of lithofacies identification results can be compromised by qualitative classification resulting from an incomplete workflow. To address this issue, a comprehensive technical workflow for mudrock lithofacies classification and logging prediction was designed based on machine learning. Principal component analysis (PCA) and hierarchical cluster analysis (HCA) were conducted to realize the automatic classification of lithofacies, which can classify according to the internal relationship of the data without the disturbance of human factors and provide an accurate lithofacies result in a much shorter time. The PCA and HCA results showed that the third submember can be split into five lithofacies: massive argillaceous limestone lithofacies (MAL), laminated calcareous claystone lithofacies (LCC), intermittent lamellar argillaceous limestone lithofacies (ILAL), continuous lamellar argillaceous limestone lithofacies (CLAL), and laminated mixed shale lithofacies (LMS). Then, random forest (RF) was performed to establish the identification model for each of the lithofacies and the obtained model is optimized by grid search (GS) and K-fold cross validation (KCV), which could then be used to predict the lithofacies of the non-coring section, and the three validation methods showed that the accuracy of the GS–KCV–RF model were all above 93%. It is possible to further enhance the performance of the models by resampling, incorporating domain knowledge, and utilizing the mechanism of attention. Our method solves the problems of the subjective and time-consuming manual interpretation of lithofacies classification and the insufficient generalization ability of machine-learning methods in the previous works on lithofacies prediction research, and the accuracy of the model for mudrocks lithofacies prediction is also greatly improved. The lithofacies machine-learning workflow introduced in this study has the potential to be applied in the Bohai Bay Basin and comparable reservoirs to enhance exploration efficiency and reduce economic costs. Full article
(This article belongs to the Section Mineral Exploration Methods and Applications)
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26 pages, 13898 KiB  
Article
pXRF and Polychromy: Identifying Pigments on Limestone Statuary from the Roman Limes, Preliminary Results
by Louisa Campbell and Charleen Hack
Heritage 2024, 7(3), 1701-1726; https://doi.org/10.3390/heritage7030080 - 18 Mar 2024
Viewed by 2833
Abstract
This paper presents the preliminary results of an investigation on the unexplored topic of polychromy on provincial stone sculptures from the Roman provinces in Germania through the innovative application of heritage materials science techniques. A group of three life-sized statues dating to the [...] Read more.
This paper presents the preliminary results of an investigation on the unexplored topic of polychromy on provincial stone sculptures from the Roman provinces in Germania through the innovative application of heritage materials science techniques. A group of three life-sized statues dating to the 1st Century CE recovered from Ingelheim, near Mainz, retains remarkably well-preserved traces of pigments. These are ripe for emerging non-invasive technologies supplemented by micro-sampling to validate results and provide information relating to mixing and layering not available to the naked eye. The most strikingly visible areas of extant polychromy were retained on the sculpture of a young woman, reported on here as the first phase of this programme of research. The results suggest that the statue was originally covered in a gypsum layer before the application of complex and diverse recipes of pigment applied as mixtures and in layers to create required hues and shadowing on sculpted features. The palette includes ochres and green earth mixed with small amounts of minium (red lead), realgar and lapis lazuli (ultramarine blue) added to create skin tones, and a vibrant blue-green tunic created from Egyptian blue, bone black, ochres, cinnabar and green earth; the palla and peplos contained ochres, bone black, and orpiment, and mixes of these created the detail of coloured jewellery. Of great interest was the detection of bone black on many features, particularly as a shading agent to enhance sculpted features, such as folds in cloth, providing a more realistic and flowing articulation. This is a revolutionary observation that provides previously unexplored insights into artistic polychromic practice in Antiquity. Full article
(This article belongs to the Special Issue Pigment Identification of Cultural Heritage Materials)
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35 pages, 9585 KiB  
Article
The Vindolanda Vessel: pXRF and Microphotography of an Enamel-Painted Roman Gladiator Glass
by Louisa Campbell
Heritage 2023, 6(4), 3638-3672; https://doi.org/10.3390/heritage6040194 - 12 Apr 2023
Viewed by 6437
Abstract
Roman glass is well studied and known to have been produced from a mineral soda source and calcareous sand with variation between elements relating to naturally occurring minerals in the sands. While the common characteristics of colourants and opacifiers used in opaque and [...] Read more.
Roman glass is well studied and known to have been produced from a mineral soda source and calcareous sand with variation between elements relating to naturally occurring minerals in the sands. While the common characteristics of colourants and opacifiers used in opaque and translucent glasses are well understood, the diverse elemental composition of colouring agents associated with the highly specialised, and largely unexplored, technique of enamel-painted glass has never been firmly established. There remains a significant gap in knowledge of pigments used for this technological innovation which is here addressed through the deployment of non-invasive portable X-ray Flourescence (pXRF) analysis and microphotography on a unique Roman enamel-painted gladiator glass from Vindolanda fort. This vanguard research has successfully established, for the first time, a palette of pigments associated with this specialist technique. It is now possible to unravel previously unknown information on complex manufacturing processes and significantly expand the repertoire of the pigments bound up in enamelling recipes used to depict the striking iconographic scenes on the Vindolanda vessel and, potentially, other Roman enamelled glassware. The detection of Cinnabar, Egyptian blue, Orpiment and other pigments are ground-breaking discoveries that will have a transformative impact on early glassmaking studies and push the boundaries of scholarship into new directions of analytical approaches in heritage materials science to complement recent success in this field with Raman spectroscopy and other techniques. The methodology is unprecedented and has been validated through the high quality of the resulting data which permits the extrapolation of elemental compositions of enamelling materials from those associated with the base vessel. This unique approach provides remarkable insights that will revolutionise our understanding of enamelling technologies using the Vindolanda vessel as the investigative platform for forgotten practice. Full article
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15 pages, 5206 KiB  
Article
Explosion Mechanism of Lubricating Oil Droplets in High-Temperature and High-Pressure Combustion Environments
by Yunliang Qi, Shubo Fei and Zhi Wang
Lubricants 2023, 11(3), 118; https://doi.org/10.3390/lubricants11030118 - 7 Mar 2023
Cited by 4 | Viewed by 4202
Abstract
Lubricating oil-induced pre-ignition is a critical issue that requires attention in downsized gasoline engines and marine low-speed two-stroke natural gas engines. As a result, the ignition behavior of lubricating oil at high temperatures and pressures has been extensively studied. In some cases, when [...] Read more.
Lubricating oil-induced pre-ignition is a critical issue that requires attention in downsized gasoline engines and marine low-speed two-stroke natural gas engines. As a result, the ignition behavior of lubricating oil at high temperatures and pressures has been extensively studied. In some cases, when studying the ignition of oil droplets using a rapid compression machine, an explosion-like behavior of the oil droplets is observed, producing a soot cloud that can spread throughout the combustion chamber, especially when the ignition delay time of the ambient gas is short. To gain detailed insights into the mechanism of oil droplet explosion, the explosion process under initial pressures from 13 to 31 bar and temperatures from 700 to 1600 K was visualized using high-speed photography and microphotography on a rapid compression machine. The effects of temperature and shock waves were experimentally investigated, and droplet deformation after shock wave impact was calculated using a simple model. The results demonstrated that high temperature does not have a significant effect on droplet explosion under the conditions studied in this paper. The shock wave impact is the primary cause of the droplet’s explosion. Full article
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13 pages, 3464 KiB  
Article
Polyurethane Foam Residue Biodegradation through the Tenebrio molitor Digestive Tract: Microbial Communities and Enzymatic Activity
by Jose M. Orts, Juan Parrado, Jose A. Pascual, Angel Orts, Jessica Cuartero, Manuel Tejada and Margarita Ros
Polymers 2023, 15(1), 204; https://doi.org/10.3390/polym15010204 - 31 Dec 2022
Cited by 18 | Viewed by 4367
Abstract
Polyurethane (PU) is a widely used polymer with a highly complex recycling process due to its chemical structure. Eliminating polyurethane is limited to incineration or accumulation in landfills. Biodegradation by enzymes and microorganisms has been studied for decades as an effective method of [...] Read more.
Polyurethane (PU) is a widely used polymer with a highly complex recycling process due to its chemical structure. Eliminating polyurethane is limited to incineration or accumulation in landfills. Biodegradation by enzymes and microorganisms has been studied for decades as an effective method of biological decomposition. In this study, Tenebrio molitor larvae (T. molitor) were fed polyurethane foam. They degraded the polymer by 35% in 17 days, resulting in a 14% weight loss in the mealworms. Changes in the T. molitor gut bacterial community and diversity were observed, which may be due to the colonization of the species associated with PU degradation. The physical and structural biodegradation of the PU, as achieved by T. molitor, was observed and compared to the characteristics of the original PU (PU-virgin) using Fourier Transform InfraRed spectroscopy (FTIR), Thermal Gravimetric Analysis (TGA), and Scanning Electron Microphotography (SEM). Full article
(This article belongs to the Special Issue Polymer Biodegradation and Polymeric Biomass Valorization)
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6 pages, 1327 KiB  
Proceeding Paper
Effect of Acid-Extrusion Cooking on Some Properties of Quinoa Starch
by Julio Rueda, Manuel Oscar Lobo, Norma Sammán and Claudia Monika Haros
Biol. Life Sci. Forum 2022, 17(1), 8; https://doi.org/10.3390/blsf2022017008 - 24 Oct 2022
Cited by 1 | Viewed by 1668
Abstract
According to the FAO, the economic potential of quinoa relies on the extraction and processing of its by-products. Starch in quinoa represents a major component. Although it has a limited application (due to its low solubility, high reactivity to hydrolysis or reactive hydroxyl [...] Read more.
According to the FAO, the economic potential of quinoa relies on the extraction and processing of its by-products. Starch in quinoa represents a major component. Although it has a limited application (due to its low solubility, high reactivity to hydrolysis or reactive hydroxyl groups), certain technological processes can modify or even improve the techno-functional or healthy properties. In this work, the effect of acid extrusion cooking on the molecular, chemical and morphological properties of quinoa starch was evaluated. A quinoa sub product from protein extraction (73% starch) was acid extruded (100 °C and 0, 10 and 40% of citric acid) and milled. Native (NS) and extruded (ES) samples were taken as the control. The resistant starch (RS) and free glucose (FG) content were measured though enzymatic methods. Molecular, structural and morphological characterization was assessed by infrared (IR) spectroscopy, particle size analysis by laser diffraction and optical microphotography. The results showed that an acid esterification at 40% caused a two-fold increase (1.10 g/100 starch dry basis) in the RS content, reduced the FG (mg/100 g db) from 801.36 (NS) to 368.56 and changed the IR spectrum due to the formation of new ester groups at a wavelength of 1712 cm−1 (carbonyl groups). Although, no significant differences were observed in the particle size distribution of the samples, microphotographs showed semi-crystalline structures (extruded and citrate starches) formed from native starch (starch aggregates). These data suggest that acid extrusion increased the RS content, formed citrate starch esters and changed the molecular and structural conformation of native quinoa starch. The evaluation of the additional properties would elucidate the effect of these changes on the bio and techno-functional properties. Full article
(This article belongs to the Proceedings of IV Conference Ia ValSe-Food CYTED and VII Symposium Chia-Link)
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21 pages, 6780 KiB  
Article
Ventral Morphology of the Non-Trilobite Artiopod Retifacies abnormalis Hou, Chen & Lu, 1989, from the Early Cambrian Chengjiang Biota, China
by Maoyin Zhang, Yu Liu, Xianguang Hou, Javier Ortega-Hernández, Huijuan Mai, Michel Schmidt, Roland R. Melzer and Jin Guo
Biology 2022, 11(8), 1235; https://doi.org/10.3390/biology11081235 - 19 Aug 2022
Cited by 12 | Viewed by 4042
Abstract
The artiopodans represent a diverse group of euarthropods with a typically flattened dorsal exoskeleton that covers numerous pairs of biramous ventral appendages, and which are ubiquitous faunal components of the 518-million-year-old Chengjiang Lagerstätte in South China. Despite their abundance, several Chengjiang artiopodans remain [...] Read more.
The artiopodans represent a diverse group of euarthropods with a typically flattened dorsal exoskeleton that covers numerous pairs of biramous ventral appendages, and which are ubiquitous faunal components of the 518-million-year-old Chengjiang Lagerstätte in South China. Despite their abundance, several Chengjiang artiopodans remain poorly known, such as the large euarthropoda Retifacies abnormalis, Hou, Chen & Lu, 1989, which is distinguished by the presence of mesh-like ornamentation on its dorsal exoskeleton. Although only a few ventral details were described in a single study in 25 years, it has been frequently featured in phylogenetic analyses that explore the relationships between Cambrian euarthropods. Here, we employ micro-CT and fluorescent microphotography to investigate the exceptionally preserved ventral morphology of R. abnormalis and explore its phylogenetic implications through maximum parsimony and Bayesian inference. Detailed morphology revealed here better supports R. abnormalis as a sister group to the diminutive artiopod Pygmaclypeatus daziensis, also known from Chengjiang, and strengthens the close relationship of these taxa that have been suggested by previous studies as early-branching representatives of Trilobitomorpha. Cephalic appendages suggest this animal might be a scavenger, possibly feeding on soft-bodied organisms. Different pairs of pygidial appendages suggest an anamorphic post-embryonic ontogeny, which adds to the understanding of the developmental mode of Cambrian artiopods, and further supports the statement that post-hatching segment addition occurred in the ancestor of Euarthropoda. Full article
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14 pages, 3474 KiB  
Article
Hyperoxia Alters Ultrastructure and Induces Apoptosis in Leukemia Cell Lines
by David De Bels, Frauke Tillmans, Francis Corazza, Mariano Bizzarri, Peter Germonpre, Peter Radermacher, Keziban Günce Orman and Costantino Balestra
Biomolecules 2020, 10(2), 282; https://doi.org/10.3390/biom10020282 - 12 Feb 2020
Cited by 15 | Viewed by 3640
Abstract
Oxygenation conditions are crucial for growth and tumor progression. Recent data suggests a decrease in cancer cell proliferation occurring after exposure to normobaric hyperoxia. Those changes are associated with fractal dimension. The purpose of this research was to study the impact of hyperoxia [...] Read more.
Oxygenation conditions are crucial for growth and tumor progression. Recent data suggests a decrease in cancer cell proliferation occurring after exposure to normobaric hyperoxia. Those changes are associated with fractal dimension. The purpose of this research was to study the impact of hyperoxia on apoptosis and morphology of leukemia cell lines. Two hematopoietic lymphoid cancer cell lines (a T-lymphoblastoid line, JURKAT and a B lymphoid line, CCRF-SB) were tested under conditions of normobaric hyperoxia (FiO2 > 60%, ± 18h) and compared to a standard group (FiO2 = 21%). We tested for apoptosis using a caspase-3 assay. Cell morphology was evaluated by cytospin, microphotography after coloration, and analysis by a fractal dimension calculation software. Our results showed that exposure of cell cultures to transient normobaric hyperoxia induced apoptosis (elevated caspase-3) as well as significant and precocious modifications in cell complexity, as highlighted by increased fractal dimensions in both cell lines. These features are associated with changes in structure (pycnotic nucleus and apoptosis) recorded by microscopic analysis. Such morphological alterations could be due to several molecular mechanisms and rearrangements in the cancer cell, leading to cell cycle inhibition and apoptosis as shown by caspase-3 activity. T cells seem less resistant to hyperoxia than B cells. Full article
(This article belongs to the Special Issue Oxygen Therapy)
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11 pages, 2633 KiB  
Article
Study on Interfacial Surface in Modified Spray Tower
by Marek Ochowiak, Sylwia Włodarczak, Ivan Pavlenko, Daniel Janecki, Andżelika Krupińska and Małgorzata Markowska
Processes 2019, 7(8), 532; https://doi.org/10.3390/pr7080532 - 13 Aug 2019
Cited by 22 | Viewed by 4862
Abstract
This paper presents an analysis of the changes in interfacial surface and the size of droplets formed in a spray tower. The interfacial surface and the size of droplets formed are of fundamental importance to the performance of the equipment, both in terms [...] Read more.
This paper presents an analysis of the changes in interfacial surface and the size of droplets formed in a spray tower. The interfacial surface and the size of droplets formed are of fundamental importance to the performance of the equipment, both in terms of pressure drop and process efficiency. Liquid film and droplet sizes were measured using a microphotography technique. The confusors studied were classical, with profiled inside surface, and with double profiled inside surface. The liquids studied were water and aqueous solutions of high-molecular polyacrylamide (PAA) of power-law characteristics. The ranges of process Reynolds number studied were as follows: ReG ∈ (42,700; 113,000), ReL ∈ (170; 15,200). A dimensionless correlation for reduced Sauter mean diameter is proposed. Full article
(This article belongs to the Section Chemical Processes and Systems)
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22 pages, 2827 KiB  
Article
Self-Organization at Aqueous Colloid-Membrane Interfaces and an Optical Method to Measure the Kinetics of Exclusion Zone Formation
by Harry Jabs and Beverly Rubik
Entropy 2014, 16(11), 5954-5975; https://doi.org/10.3390/e16115954 - 17 Nov 2014
Cited by 6 | Viewed by 7481
Abstract
Exclusion zone (EZ) formation at water-membrane interfaces was studied via bright- and dark-field microscopy. Various aqueous colloids including suspensions of charged microspheres, silicon dioxide particles, and raw whole milk were studied with Nafion® hydrophilic membranes. Interfacial formations observed included EZs and more [...] Read more.
Exclusion zone (EZ) formation at water-membrane interfaces was studied via bright- and dark-field microscopy. Various aqueous colloids including suspensions of charged microspheres, silicon dioxide particles, and raw whole milk were studied with Nafion® hydrophilic membranes. Interfacial formations observed included EZs and more complex patterns including striations, double layers, banding, dendritic aggregates of particles, and double-stranded structures resembling Birkeland current filaments in cold plasmas. A complex three-dimensional dynamic structure and continuous flow patterns persist in and around EZs, maintaining movement of the colloidal particles even after EZs are fully formed, for which a schematic is proposed. Since radiant energy is critical for EZ formation, we hypothesize that these interfacial phenomena are non-equilibrium dissipative structures that self-organize and self-maintain due to ongoing dynamic processes that may involve hydrodynamic interactions. Another experimental approach undertaken involved the construction of a microscope flow cell to measure the kinetics of EZ formation using sequential microphotography analyzed with macro-programmed ImageJ software to investigate effects of different types of conditioned water. No significant difference was found between spring water and the same water treated by a magnetic vortexer. A significant difference was found for municipal tap water compared to electrolyzed alkaline tap water from the same source. Full article
(This article belongs to the Special Issue Entropy and EZ-Water)
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13 pages, 2314 KiB  
Article
A New Method for Characterization of Natural Zeolites and Organic Nanostructure Using Atomic Force Microscopy
by Domenico Fuoco
Nanomaterials 2012, 2(1), 79-91; https://doi.org/10.3390/nano2010079 - 5 Mar 2012
Cited by 14 | Viewed by 10080
Abstract
In order to study and develop an economical solution to environmental pollution in water, a wide variety of materials have been investigated. Natural zeolites emerge from that research as the best in class of this category. Zeolites are natural materials which are relatively [...] Read more.
In order to study and develop an economical solution to environmental pollution in water, a wide variety of materials have been investigated. Natural zeolites emerge from that research as the best in class of this category. Zeolites are natural materials which are relatively abundant and non biodegradable, economical and serve to perform processes of environmental remediation. This paper contains a full description of a new method to characterize the superficial properties of natural zeolites of exotic provenience (Caribbean Islets) with atomic force microscopy (AFM). AFM works with the simplicity of the optical microscope and the high resolution typical of a transmission electron microscope (TEM). If the sample is conductive, structural information of mesoporous material is obtained using scanning and transmission electron microscopy (SEM and TEM), otherwise the sample has to be processed through the grafitation technique, but this procedure induces errors of topography. Therefore, the existing AFM method, to observe zeolite powders, is made in a liquid cell-head scanner. This work confirms that it is possible to use an ambient air-head scanner to obtain a new kind of microtopography. Once optimized, this new method will allow investigation of organic micelles, a very soft nanostructure of cetyltriammonium bromide (CTAB), upon an inorganic surface such as natural zeolites. The data also demonstrated some correlation between SEM microphotographies and AFM 3D images. Full article
(This article belongs to the Special Issue New Developments in Nanomaterial Analysis)
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