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Keywords = lactate hydrogenase

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20 pages, 4979 KB  
Article
Improvement of Biohydrogen and Usable Chemical Products from Glycerol by Co-Culture of Enterobacter spH1 and Citrobacter freundii H3 Using Different Supports as Surface Immobilization
by Biniam T. Maru, Francisco Lopez, Francesc Medina and Magda Constantí
Fermentation 2021, 7(3), 154; https://doi.org/10.3390/fermentation7030154 - 15 Aug 2021
Cited by 5 | Viewed by 3518
Abstract
Glycerol is a by-product of biodiesel production in a yield of about 10% (w/w). The present study aims to improve the dark fermentation of glycerol by surface immobilization of microorganisms on supports. Four different supports were used—maghemite (Fe2 [...] Read more.
Glycerol is a by-product of biodiesel production in a yield of about 10% (w/w). The present study aims to improve the dark fermentation of glycerol by surface immobilization of microorganisms on supports. Four different supports were used—maghemite (Fe2O3), activated carbon (AC), silica gel (SiO2), and alumina (γ-Al2O3)—on which a newly isolated co-culture of Enterobacter spH1 and Citrobacter freundii, H3, was immobilized. The effect of iron species on dark fermentation was also studied by impregnation on AC and SiO2. The fermentative metabolites were mainly ethanol, 1,3-propanediol, lactate, H2 and CO2. The production rate (Rmax,i) and product yield (Yi) were elucidated by modeling using the Gompertz equation for the batch dark fermentation kinetics (maximum product formation (Pmax,i): (i) For each of the supports, H2 production (mmol/L) and yield (mol H2/mol glycerol consumed) increased in the following order: FC < γ-Al2O3 < Fe2O3 < SiO2 < Fe/SiO2 < AC < Fe/AC. (ii) Ethanol production (mmol/L) increased in the following order: FC < Fe2O3 < γ-Al2O3 < SiO2 < Fe/SiO2 < Fe/AC < AC, and yield (mol EtOH/mol glycerol consumed) increased in the following order: FC < Fe2O3 < Fe/AC < Fe/SiO2 < SiO2 < AC < γ-Al2O3. (iii) 1,3-propanediol production (mmol/L) and yield (mol 1,3PDO/mol glycerol consumed) increased in the following order: γ-Al2O3 < SiO2 < Fe/SiO2 < AC < Fe2O3 < Fe/AC < FC. (iv) Lactate production(mmol/L) and yield (mol Lactate/mol glycerol consumed) increased in the following order: γ-Al2O3 < SiO2 < AC < Fe/SiO2 < Fe/AC < Fe2O3 < FC. The study shows that in all cases, glycerol conversion was higher when the support assisted culture was used. It is noted that glycerol conversion and H2 production were dependent on the specific surface area of the support. H2 production clearly increased with the Fe2O3, Al2O3, SiO2 and AC supports. H2 production on the iron-impregnated AC and SiO2 supports was higher than on the corresponding bare supports. These results indicate that the support enhances the productivity of H2, perhaps because of specific surface area attachment, biofilm formation of the microorganisms and activation of the hydrogenase enzyme by iron species. Full article
(This article belongs to the Special Issue Food Wastes: Feedstock for Value-Added Products: 3rd Edition)
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24 pages, 3764 KB  
Article
Crocetin Prevents RPE Cells from Oxidative Stress through Protection of Cellular Metabolic Function and Activation of ERK1/2
by Padideh Karimi, Ali Gheisari, Sylvia J Gasparini, Hossein Baharvand, Faezeh Shekari, Leila Satarian and Marius Ader
Int. J. Mol. Sci. 2020, 21(8), 2949; https://doi.org/10.3390/ijms21082949 - 22 Apr 2020
Cited by 30 | Viewed by 6247 | Correction
Abstract
Age-related macular degeneration (AMD) is a leading cause for visual impairment in aging populations with limited established therapeutic interventions available. Oxidative stress plays an essential role in the pathogenesis of AMD, damaging the retinal pigment epithelium (RPE), which is essential for the function [...] Read more.
Age-related macular degeneration (AMD) is a leading cause for visual impairment in aging populations with limited established therapeutic interventions available. Oxidative stress plays an essential role in the pathogenesis of AMD, damaging the retinal pigment epithelium (RPE), which is essential for the function and maintenance of the light-sensing photoreceptors. This study aimed to evaluate the effects of crocetin, one of the main components of Saffron, on an in vitro RPE model of tert-butyl hydroperoxide (TBHP) induced oxidative stress using ARPE19 cells. The effects of crocetin were assessed using lactate de-hydrogenase (LDH) and ATP assays, as well as immunocytochemistry for cell morphology, junctional integrity, and nuclear morphology. The mechanism of crocetin action was determined via assessment of energy production pathways, including mitochondrial respiration and glycolysis in real-time as well as investigation of extracellular signal-regulated kinase 1/2 (ERK1/2) activation and distribution. Our results show that crocetin pre-treatment protects ARPE19 cells from TBHP-induced LDH release, intracellular ATP depletion, nuclear condensation, and disturbance of junctional integrity and cytoskeleton. The protective effect of crocetin is mediated via the preservation of energy production pathways and activation of ERK1/2 in the first minutes of TBHP exposure to potentiate survival pathways. The combined data suggest that a natural antioxidant, such as crocetin, represents a promising candidate to prevent oxidative stress in RPE cells and might halt or delay disease progression in AMD. Full article
(This article belongs to the Special Issue Retinal Degeneration: From Pathophysiology to Therapeutic Approaches)
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13 pages, 4090 KB  
Article
Bioinspired Design and Computational Prediction of SCS Nickel Pincer Complexes for Hydrogenation of Carbon Dioxide
by Xiaoyun Liu, Bing Qiu and Xinzheng Yang
Catalysts 2020, 10(3), 319; https://doi.org/10.3390/catal10030319 - 11 Mar 2020
Cited by 8 | Viewed by 4544
Abstract
Inspired by the structures of the active site of lactate racemase and H2 activation mechanism of mono-iron hydrogenase, we proposed a series of sulphur–carbon–sulphur (SCS) nickel complexes and computationally predicted their potentials for catalytic hydrogenation of CO2. Density functional theory [...] Read more.
Inspired by the structures of the active site of lactate racemase and H2 activation mechanism of mono-iron hydrogenase, we proposed a series of sulphur–carbon–sulphur (SCS) nickel complexes and computationally predicted their potentials for catalytic hydrogenation of CO2. Density functional theory calculations reveal a metal–ligand cooperated mechanism with the participation of a sulfur atom in the SCS pincer ligand as a proton receiver for the heterolytic cleavage of H2. For all newly proposed complexes containing functional groups with different electron-donating and withdrawing abilities in the SCS ligand, the predicted free energy barriers for the hydrogenation of CO2 to formic acid are in a range of 22.2–25.5 kcal/mol in water. Such a small difference in energy barriers indicates limited contributions of those functional groups to the charge density of the metal center. We further explored the catalytic mechanism of the simplest model complex for hydrogenation of formic acid to formaldehyde and obtained a total free energy barrier of 34.6 kcal/mol for the hydrogenation of CO2 to methanol. Full article
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29 pages, 7372 KB  
Review
Theoretical Studies of Nickel-Dependent Enzymes
by Per E. M. Siegbahn, Shi-Lu Chen and Rong-Zhen Liao
Inorganics 2019, 7(8), 95; https://doi.org/10.3390/inorganics7080095 - 29 Jul 2019
Cited by 24 | Viewed by 8157
Abstract
The advancements of quantum chemical methods and computer power allow detailed mechanistic investigations of metalloenzymes. In particular, both quantum chemical cluster and combined QM/MM approaches have been used, which have been proven to successfully complement experimental studies. This review starts with a brief [...] Read more.
The advancements of quantum chemical methods and computer power allow detailed mechanistic investigations of metalloenzymes. In particular, both quantum chemical cluster and combined QM/MM approaches have been used, which have been proven to successfully complement experimental studies. This review starts with a brief introduction of nickel-dependent enzymes and then summarizes theoretical studies on the reaction mechanisms of these enzymes, including NiFe hydrogenase, methyl-coenzyme M reductase, nickel CO dehydrogenase, acetyl CoA synthase, acireductone dioxygenase, quercetin 2,4-dioxygenase, urease, lactate racemase, and superoxide dismutase. Full article
(This article belongs to the Special Issue Bioinorganic Chemistry of Nickel)
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12 pages, 1704 KB  
Article
Elevated Lactate Dehydrogenase Has Prognostic Relevance in Treatment-Naïve Patients Affected by Chronic Lymphocytic Leukemia with Trisomy 12
by Francesco Autore, Paolo Strati, Idanna Innocenti, Francesco Corrente, Livio Trentin, Agostino Cortelezzi, Carlo Visco, Marta Coscia, Antonio Cuneo, Alessandro Gozzetti, Francesca Romana Mauro, Anna Maria Frustaci, Massimo Gentile, Fortunato Morabito, Stefano Molica, Paolo Falcucci, Giovanni D’Arena, Roberta Murru, Donatella Vincelli, Dimitar G Efremov, Antonietta Ferretti, Gian Matteo Rigolin, Candida Vitale, Maria Chiara Tisi, Gianluigi Reda, Andrea Visentin, Simona Sica, Robin Foà, Alessandra Ferrajoli and Luca Laurentiadd Show full author list remove Hide full author list
Cancers 2019, 11(7), 896; https://doi.org/10.3390/cancers11070896 - 26 Jun 2019
Cited by 15 | Viewed by 6122
Abstract
Chronic Lymphocytic Leukemia (CLL) patients with +12 have been reported to have specific clinical and biologic features. We performed an analysis of the association between demographic; clinical; laboratory; biologic features and outcome in CLL patients with +12 to identify parameters predictive of disease [...] Read more.
Chronic Lymphocytic Leukemia (CLL) patients with +12 have been reported to have specific clinical and biologic features. We performed an analysis of the association between demographic; clinical; laboratory; biologic features and outcome in CLL patients with +12 to identify parameters predictive of disease progression; time to treatment; and survival. The study included 487 treatment-naive CLL patients with +12 from 15 academic centers; diagnosed between January 2000 and July 2016; and 816 treatment-naïve patients with absence of Fluorescence In Situ Hybridization (FISH) abnormalities. A cohort of 250 patients with +12 CLL followed at a single US institution was used for external validation. In patients with +12; parameters associated with worse prognosis in the multivariate model were high Lactate DeHydrogenase (LDH) and β-2-microglobulin and unmutated immunoglobulin heavy-chain variable region gene (IGHV). CLL patients with +12 and high LDH levels showed a shorter Progression-Free-Survival (PFS) (30 months vs. 65 months; p < 0.001), Treatment-Free-Survival (TFS) (33 months vs. 69 months; p < 0.001), Overall Survival (OS) (131 months vs. 181 months; p < 0.001) and greater CLL-related mortality (29% vs. 11% at 10 years; p < 0.001) when compared with +12 CLL patients with normal LDH levels. The same differences were observed in the validation cohort. These data suggest that serum LDH levels can predict PFS; TFS; OS and CLL-specific survival in CLL patients with +12. Full article
(This article belongs to the Special Issue Chronic Lymphocytic Leukemia)
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22 pages, 545 KB  
Review
Sensors for Fetal Hypoxia and Metabolic Acidosis: A Review
by Gerard Cummins, Jessica Kremer, Anne Bernassau, Andrew Brown, Helen L. Bridle, Holger Schulze, Till T. Bachmann, Michael Crichton, Fiona C. Denison and Marc P. Y. Desmulliez
Sensors 2018, 18(8), 2648; https://doi.org/10.3390/s18082648 - 13 Aug 2018
Cited by 23 | Viewed by 10613
Abstract
This article reviews existing clinical practices and sensor research undertaken to monitor fetal well-being during labour. Current clinical practices that include fetal heart rate monitoring and fetal scalp blood sampling are shown to be either inadequate or time-consuming. Monitoring of lactate in blood [...] Read more.
This article reviews existing clinical practices and sensor research undertaken to monitor fetal well-being during labour. Current clinical practices that include fetal heart rate monitoring and fetal scalp blood sampling are shown to be either inadequate or time-consuming. Monitoring of lactate in blood is identified as a potential alternative for intrapartum fetal monitoring due to its ability to distinguish between different types of acidosis. A literature review from a medical and technical perspective is presented to identify the current advancements in the field of lactate sensors for this application. It is concluded that a less invasive and a more continuous monitoring device is required to fulfill the clinical needs of intrapartum fetal monitoring. Potential specifications for such a system are also presented in this paper. Full article
(This article belongs to the Section Biosensors)
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