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Keywords = integrated aquaculture

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16 pages, 1507 KiB  
Article
Quantifying the Environmental Performance of the Oyster (Crassostrea gigas) Supply Chain: A Life Cycle Assessment in Dalian, China
by Haochen Hou, Fengfan Han, Jie Song, Fei Jia, Yang Bai, Zhen Ma, Zhongming Huo and Ying Liu
Sustainability 2025, 17(16), 7392; https://doi.org/10.3390/su17167392 - 15 Aug 2025
Viewed by 28
Abstract
Aquaculture is recognized as a critical contributor to global high-quality protein provision and food security maintenance. As the world’s most extensively cultivated bivalve species, the Pacific oyster (Crassostrea gigas) holds significant ecological and socioeconomic value. However, environmental impacts associated with its [...] Read more.
Aquaculture is recognized as a critical contributor to global high-quality protein provision and food security maintenance. As the world’s most extensively cultivated bivalve species, the Pacific oyster (Crassostrea gigas) holds significant ecological and socioeconomic value. However, environmental impacts associated with its supply chain remain inadequately quantified. In this study, a cradle-to-gate Life Cycle Assessment (LCA) framework was implemented to evaluate the oyster production supply chain in Dalian, China, encompassing breeding, aquaculture, and processing stages and eleven environmental impact categories were systematically quantified. The results demonstrate that the aquaculture stage dominates the life cycle environmental footprint, contributing 88.9% of the total impacts. Marine aquatic ecotoxicity potential (MAETP) was identified as the predominant category, representing 92% of impacts within this stage. To advance sustainable development, further quantification of environmental impact drivers is recommended. Additionally, the feasibility of renewable energy adoption must be assessed, intelligent aquaculture management systems developed, and integrated evaluation models established. This study provides a useful reference for LCA methodology advancement in China’s aquaculture sector while contributing to global aquatic Life Cycle Inventory databases. Full article
(This article belongs to the Special Issue Sustainability in Aquaculture Systems)
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23 pages, 812 KiB  
Article
Integration of Aquaculture Wastewater Treatment and Chlorella vulgaris Cultivation as a Sustainable Method for Biofuel Production
by Marcin Zieliński, Marta Kisielewska, Annamaria Talpalaru, Paulina Rusanowska, Joanna Kazimierowicz and Marcin Dębowski
Energies 2025, 18(16), 4352; https://doi.org/10.3390/en18164352 - 15 Aug 2025
Viewed by 72
Abstract
The integration of microalgae cultivation in the treatment of aquaculture wastewater (AWW) offers a sustainable solution for the recovery of nutrients and the valorisation of biomass. In this study, the potential of Chlorella vulgaris for growth in raw AWW and its variants was [...] Read more.
The integration of microalgae cultivation in the treatment of aquaculture wastewater (AWW) offers a sustainable solution for the recovery of nutrients and the valorisation of biomass. In this study, the potential of Chlorella vulgaris for growth in raw AWW and its variants was investigated and the efficiency of nutrient removal, biochemical composition of biomass, biodiesel potential by FAME analysis, and biogas production were evaluated. C. vulgaris was cultivated in three media: raw AWW, microelement-enriched AWW, and a synthetic base medium. Raw AWW allowed for the highest biomass production (2.4 g VS/L) and nutrient removal efficiency (ammonia: 100%, phosphate: 93.7%, nitrate: 37.8%). The addition of microelements did not significantly improve growth or nutrient uptake. The biomass grown on AWW showed a favourable lipid profile for biodiesel, dominated by C16:0 and C18:1. The highest biogas and methane yields were recorded for biomass from raw AWW as 358 ± 11 L/kg VS and 216 ± 7 L/kg VS, respectively. The results confirm that AWW is a suitable medium for the cultivation of C. vulgaris, enabling efficient wastewater treatment and the production of high-quality biomass. Full article
(This article belongs to the Special Issue Clean Use of Fuels: Future Trends and Challenges)
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19 pages, 1619 KiB  
Article
Impact of Water Velocity on Litopenaeus vannamei Behavior Using ByteTrack-Based Multi-Object Tracking
by Jiahao Zhang, Lei Wang, Zhengguo Cui, Hao Li, Jianlei Chen, Yong Xu, Haixiang Zhao, Zhenming Huang, Keming Qu and Hongwu Cui
Fishes 2025, 10(8), 406; https://doi.org/10.3390/fishes10080406 - 14 Aug 2025
Viewed by 183
Abstract
In factory-controlled recirculating aquaculture systems, precise regulation of water velocity is crucial for optimizing shrimp feeding behavior and improving aquaculture efficiency. However, quantitative analysis of the impact of water velocity on shrimp behavior remains challenging. This study developed an innovative multi-objective behavioral analysis [...] Read more.
In factory-controlled recirculating aquaculture systems, precise regulation of water velocity is crucial for optimizing shrimp feeding behavior and improving aquaculture efficiency. However, quantitative analysis of the impact of water velocity on shrimp behavior remains challenging. This study developed an innovative multi-objective behavioral analysis framework integrating detection, tracking, and behavioral interpretation. Specifically, the YOLOv8 model was employed for precise shrimp detection, ByteTrack with a dual-threshold matching strategy ensured continuous individual trajectory tracking in complex water environments, and Kalman filtering corrected coordinate offsets caused by water refraction. Under typical recirculating aquaculture system conditions, three water circulation rates (2.0, 5.0, and 10.0 cycles/day) were established to simulate varying flow velocities. High-frequency imaging (30 fps) was used to simultaneously record and analyze the movement trajectories of Litopenaeus vannamei during feeding and non-feeding periods, from which two-dimensional behavioral parameters—velocity and turning angle—were extracted. Key experimental results indicated that water circulation rates significantly affected shrimp movement velocity but had no significant effect on turning angle. Importantly, under only the moderate circulation rate (5.0 cycles/day), the average movement velocity during feeding was significantly lower than during non-feeding periods (p < 0.05). This finding reveals that moderate water velocity constitutes a critical hydrodynamic window for eliciting specific feeding behavior in shrimp. These results provide core parameters for an intelligent Litopenaeus vannamei feeding intensity assessment model based on spatiotemporal graph convolutional networks and offer theoretically valuable and practically applicable guidance for optimizing hydrodynamics and formulating precision feeding strategies in recirculating aquaculture systems. Full article
(This article belongs to the Special Issue Application of Artificial Intelligence in Aquaculture)
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31 pages, 4710 KiB  
Article
YOLO-TPS: A Multi-Module Synergistic High-Precision Fish-Disease Detection Model for Complex Aquaculture Environments
by Cheng Ouyang, Hao Peng, Mingyu Tan, Lin Yang, Jingtao Deng, Pin Jiang, Wenwu Hu and Yi Wang
Animals 2025, 15(16), 2356; https://doi.org/10.3390/ani15162356 - 11 Aug 2025
Viewed by 274
Abstract
Fish are a vital aquatic resource worldwide, and the sustainable development of aquaculture is essential for global food security and economic growth. However, the high incidence of fish diseases in complex aquaculture environments significantly hampers sustainability, and traditional manual diagnosis methods are inefficient [...] Read more.
Fish are a vital aquatic resource worldwide, and the sustainable development of aquaculture is essential for global food security and economic growth. However, the high incidence of fish diseases in complex aquaculture environments significantly hampers sustainability, and traditional manual diagnosis methods are inefficient and often inaccurate. To address the challenges of small-lesion detection, lesion area size and morphological variation, and background complexity, we propose YOLO-TPS, a high-precision fish-disease detection model based on an improved YOLOv11n architecture. The model integrates a multi-module synergy strategy and a triple-attention mechanism to enhance detection performance. Specifically, the SPPF_TSFA module is introduced into the backbone to fuse spatial, channel, and neuron-level attention for better multi-scale feature extraction of early-stage lesions. A PC_Shuffleblock module incorporating asymmetric pinwheel-shaped convolutions is embedded in the detection head to improve spatial awareness and texture modeling under complex visual conditions. Additionally, a scale-aware dynamic intersection over union (SDIoU) loss function was designed to accommodate changes in the scale and morphology of lesions at different stages of the disease. Experimental results on a dataset comprising 4596 images across six fish-disease categories demonstrate superior performance (mAP0.5: 97.2%, Precision: 97.9%, Recall: 95.1%) compared to the baseline. This study offers a robust, scalable solution for intelligent fish-disease diagnosis and has promising implications for sustainable aquaculture and animal health monitoring. Full article
(This article belongs to the Section Animal System and Management)
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19 pages, 1311 KiB  
Article
Assessment of Ecosystem Service Value and Implementation Pathways: A Case Study of Jiangsu Jianchuan Ecological Restoration Project
by Pinjie Zhang, Jingyan Wang, Yijia Zhu, Pingyan Ge and Zhunqiao Liu
Land 2025, 14(8), 1618; https://doi.org/10.3390/land14081618 - 8 Aug 2025
Viewed by 257
Abstract
Over recent decades, coastal wetlands in Jiangsu Province have faced multiple challenges, including overfishing, reclamation for aquaculture, wetland shrinkage, and biodiversity loss. Implementing wetland ecological restoration proves crucial for mitigating the degradation of coastal wetland ecosystems. Quantifying ecosystem service values and establishing rational [...] Read more.
Over recent decades, coastal wetlands in Jiangsu Province have faced multiple challenges, including overfishing, reclamation for aquaculture, wetland shrinkage, and biodiversity loss. Implementing wetland ecological restoration proves crucial for mitigating the degradation of coastal wetland ecosystems. Quantifying ecosystem service values and establishing rational ecological compensation standards provide essential references for ecological compensation research and alleviating human–land conflicts. The Jianchuan Ecological Restoration Project, located in Dafeng District of Yancheng City, Jiangsu Province, employs integrated wetland, woodland, and farmland construction to rebuild biodiversity, enhance water conservation capacity, and improve water purification functions, thereby significantly boosting regional ecological services. Results have demonstrated that the total ecosystem service value of this project reaches CNY 76.2896 million, with climate regulation representing the highest value (CNY 68.1496 million, 89.33% of total). Subsequent values include biodiversity maintenance (3.40%), water purification (3.31%), and food production (2.95%), while carbon sequestration/oxygen release (0.96%) and soil retention (0.05%) show relatively lower contributions. Notably, this project innovatively integrates carbon finance mechanisms through “carbon sink loans”, achieving efficient transformation of ecological value from “paper accounts” to market realization. This study establishes a scientific foundation for ecological restoration projects through ecosystem service-based value assessment and pathway exploration, offering both theoretical framework and practical references. Full article
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15 pages, 1805 KiB  
Article
Indoor Application of Coupled FLOCponics System with Caipira Lettuce (Lactuca sativa) Affects the Growth Performance and Water Characteristics of Far Eastern Catfish (Silurus asotus) and Tropical Eel (Anguilla bicolor)
by Jun Seong Park, Hae Seung Jeong, Jeong-ho Lee and Ju-ae Hwang
Animals 2025, 15(15), 2305; https://doi.org/10.3390/ani15152305 - 6 Aug 2025
Viewed by 248
Abstract
In this study, we sought to improve the productivity of Far Eastern catfish (Silurus asotus) and tropical eel (Anguilla bicolor), which are high-value fish species in the Republic of Korea, as well as that of associated crops by applying [...] Read more.
In this study, we sought to improve the productivity of Far Eastern catfish (Silurus asotus) and tropical eel (Anguilla bicolor), which are high-value fish species in the Republic of Korea, as well as that of associated crops by applying biofloc technology (BFT)-based aquaponics systems. The following three systems were used: the flow-through system (FTS), BFT, and BFT aquaponics system (BAPs). Caipira lettuce (Lactuca sativa) was utilized and hydroponics (HP) was implemented to compare crop productivity. After 42 days of treatment, the BAPs and BFT systems improved fish productivity, with weight gain rates of 134.47 ± 1.80% in BAPs-cat, 130.38 ± 0.95% in BFT, and 114.21 ± 6.62% in FTS for S. asotus, and 70.61 ± 3.26% in BAPs-eel, 62.37 ± 7.04% in BFT, and 47.83 ± 1.09% in FTS for A. bicolor. During the experiment, the total ammonia nitrogen and NO2-N concentrations were stable in all plots. In the case of NO3-N, BFT showed an increasing tendency while both BAPs showed a decrease compared with that of the BFT. BAPs-cat (total weight: 224.1 ± 6.37 g) and HP (220.3 ± 7.17 g) resulted in similar growth. However, in BAPs-eel was 187.7 ± 3.46 g due to root degradation. Water content analysis showed that BAPs-cat and BAPs-eel contained sufficient K, Ca, P, and S, which are important for crop growth. Overall, the effect of BAPs on fish growth was higher than that of FTS. This study reveals that integrating BFT with aquaponics improves productivity for high-value fish and associated crops while maintaining stable water quality. This method offers sustainable, efficient production, reduces environmental impact, and provides insights for future research in sustainable aquaculture practices. Full article
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28 pages, 1211 KiB  
Review
Phosphorus in Salmonid Aquaculture: Sources, Requirements, and System-Level Implications
by Vegard Øvstetun Flo, Torbjørn Åsgård and Odd-Ivar Lekang
Fishes 2025, 10(8), 388; https://doi.org/10.3390/fishes10080388 - 6 Aug 2025
Viewed by 425
Abstract
This review provides a comprehensive synthesis of phosphorus (P) dynamics relevant to salmonid aquaculture, with a particular focus on Atlantic salmon. It explores the global P cycle, the chemical forms of P in aquatic systems, and the implications of P sourcing, processing, and [...] Read more.
This review provides a comprehensive synthesis of phosphorus (P) dynamics relevant to salmonid aquaculture, with a particular focus on Atlantic salmon. It explores the global P cycle, the chemical forms of P in aquatic systems, and the implications of P sourcing, processing, and availability in aquafeeds. The review distinguishes between digestibility and availability of P, summarizes requirement studies, and evaluates the contribution of marine, animal, vegetable, and inorganic sources to dietary P. It also examines how aquaculture system design, particularly recirculating aquaculture systems (RASs), influences P accumulation and emissions. By integrating nutritional, physiological, and environmental perspectives, this review offers a uniquely holistic view of P efficiency and sustainability in salmonid aquaculture. Full article
(This article belongs to the Section Sustainable Aquaculture)
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21 pages, 4907 KiB  
Article
Integrated Transcriptomic and Metabolomic Analysis Reveals the Molecular Mechanisms Involved in the Adaptations of Mandarin Fish (Siniperca chuatsi) to Compound Feed
by Yunyun Yan, Yuan Zhang, Junjian Dong, Fubao Wang, Hetong Zhang, Fengying Gao, Xing Ye, Chengbin Wu and Chengfei Sun
Fishes 2025, 10(8), 379; https://doi.org/10.3390/fishes10080379 - 4 Aug 2025
Viewed by 256
Abstract
Siniperca chuatsi is an important high-quality freshwater aquaculture species in China. In nature, it feeds exclusively on live food. In this study, domesticated juvenile S. chuatsi were divided into three groups and fed live food (group L), compound feed (group C), or [...] Read more.
Siniperca chuatsi is an important high-quality freshwater aquaculture species in China. In nature, it feeds exclusively on live food. In this study, domesticated juvenile S. chuatsi were divided into three groups and fed live food (group L), compound feed (group C), or a mixed diet (group M) for three months to investigate the molecular mechanisms underlying adaptation to compound feed. Histopathological examination revealed that compound feed consumption induced looser liver cell arrangement, hepatocyte morphological irregularities, and vacuolization. A total of 1033 and 1428 differentially expressed genes (DEGs), and 187 and 184 differential metabolites (DMs), were identified in the C vs. L and C vs. M groups, respectively. Transcriptomic analysis revealed that the significantly and commonly enriched metabolic pathways shared by both comparison groups were predominantly involved in amino acid, carbohydrate, and lipid metabolisms. Metabolomic analysis demonstrated that the significantly and commonly enriched metabolic pathways shared by both comparison groups were the arachidonic acid metabolism, linoleic acid metabolism, oxidative phosphorylation, and PPAR signalling pathways. Integrated omics analysis showed that the PPAR signalling pathway was the only significantly co-enriched pathway across both omics datasets. This study provides new insights into the molecular mechanisms of compound feed adaptation and provides theoretical support for selecting feed traits in S. chuatsi. Full article
(This article belongs to the Section Genetics and Biotechnology)
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16 pages, 2547 KiB  
Article
Formation and Biological Characteristics Analysis of Artificial Gynogenetic WuLi Carp Induced by Inactivated Sperm of Megalobrama Amblycephala
by Xiaowei Xu, Enkui Hu, Qian Xiao, Xu Huang, Chongqing Wang, Xidan Xu, Kun Zhang, Yue Zhou, Jinhai Bai, Zhengkun Liu, Yuchen Jiang, Yan Tang, Xinyi Deng, Siyang Li, Wanjing Peng, Ling Xiong, Yuhan Yang, Zeyang Li, Ming Ma, Qinbo Qin and Shaojun Liuadd Show full author list remove Hide full author list
Biology 2025, 14(8), 994; https://doi.org/10.3390/biology14080994 - 4 Aug 2025
Viewed by 366
Abstract
Artificial gynogenesis is an essential technique for aquaculture breeding. Fertile offspring of the WuLi carp (Cyprinus carpio var. Quanzhounensis, 2n = 100, WLC) were successfully produced via gynogenesis using ultraviolet-irradiated sperm from the blunt snout bream (Megalobrama amblycephala, 2 [...] Read more.
Artificial gynogenesis is an essential technique for aquaculture breeding. Fertile offspring of the WuLi carp (Cyprinus carpio var. Quanzhounensis, 2n = 100, WLC) were successfully produced via gynogenesis using ultraviolet-irradiated sperm from the blunt snout bream (Megalobrama amblycephala, 2n = 48, BSB). As anticipated, gonadal section examination confirmed that all gynogenetic WuLi carp (2n = 100, GWB) were female. To investigate whether paternal DNA fragments from BSB were integrated into the GWB genome, comparative analyses of morphological traits, DNA content, chromosomal numbers, 5S rDNA sequences, microsatellite DNA markers, fluorescence in situ hybridization (FISH), growth performance and nutritional composition were systematically conducted between GWB and maternal WLC. The results revealed pronounced maternal inheritance patterns across morphological characteristics, DNA quantification, chromosomal configurations, 5S rDNA sequences and FISH signals, while microsatellite detection unequivocally confirmed paternal BSB DNA fragment integration into the GWB genome. Remarkably, GWB demonstrated significantly superior growth performance and elevated unsaturated fatty acid content relative to the maternal line. This approach not only addressed germplasm degradation in WLC but also provided valuable theoretical foundations for breeding programs in this commercially significant species. Full article
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18 pages, 603 KiB  
Article
Leveraging Dynamic Pricing and Real-Time Grid Analysis: A Danish Perspective on Flexible Industry Optimization
by Sreelatha Aihloor Subramanyam, Sina Ghaemi, Hessam Golmohamadi, Amjad Anvari-Moghaddam and Birgitte Bak-Jensen
Energies 2025, 18(15), 4116; https://doi.org/10.3390/en18154116 - 3 Aug 2025
Viewed by 223
Abstract
Flexibility is advocated as an effective solution to address the growing need to alleviate grid congestion, necessitating efficient energy management strategies for industrial operations. This paper presents a mixed-integer linear programming (MILP)-based optimization framework for a flexible asset in an industrial setting, aiming [...] Read more.
Flexibility is advocated as an effective solution to address the growing need to alleviate grid congestion, necessitating efficient energy management strategies for industrial operations. This paper presents a mixed-integer linear programming (MILP)-based optimization framework for a flexible asset in an industrial setting, aiming to minimize operational costs and enhance energy efficiency. The method integrates dynamic pricing and real-time grid analysis, alongside a state estimation model using Extended Kalman Filtering (EKF) that improves the accuracy of system state predictions. Model Predictive Control (MPC) is employed for real-time adjustments. A real-world case studies from aquaculture industries and industrial power grids in Denmark demonstrates the approach. By leveraging dynamic pricing and grid signals, the system enables adaptive pump scheduling, achieving a 27% reduction in energy costs while maintaining voltage stability within 0.95–1.05 p.u. and ensuring operational safety. These results confirm the effectiveness of grid-aware, flexible control in reducing costs and enhancing stability, supporting the transition toward smarter, sustainable industrial energy systems. Full article
(This article belongs to the Section F1: Electrical Power System)
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16 pages, 5845 KiB  
Article
Ultrastructure and Transcriptomic Analysis Reveal Alternative Pathways of Zona Radiata Formation in Culter alburnus with Different Spawning Habits
by Yan Zhao, Ge Xue, Yanghui Peng, Jia Zhang, Feng Chen, Yeke Wang, Jun He, Jun Chen and Ping Xie
Biology 2025, 14(8), 987; https://doi.org/10.3390/biology14080987 - 3 Aug 2025
Viewed by 292
Abstract
Spawning diversity plays an essential role in fish survival and reproduction, which contributes to the exceptional diversity of teleosts among vertebrates. Different zona radiata structures reflect the adaptability of fish to the environment of spawning and early embryonic development. The morphological and transcriptional [...] Read more.
Spawning diversity plays an essential role in fish survival and reproduction, which contributes to the exceptional diversity of teleosts among vertebrates. Different zona radiata structures reflect the adaptability of fish to the environment of spawning and early embryonic development. The morphological and transcriptional characteristics of fish follicle development between different spawning habits, particularly the zona radiata variations, have been poorly documented. In this study, we integrated histology and transcriptomics to investigate the differences in the zona radiata structure and gene expression profiles among follicles from different spawning habits of Culter alburnus. Our results revealed that stage Ⅲ was the crucial period for zona radiata thickening and structure differentiation. Transcriptomic analyses of adhesive and semi-buoyant eggs at stage Ⅲ revealed a significant upregulation of genes involved in glycoprotein synthesis, extracellular matrix formation, and regulation of protease activity in adhesive eggs, such as the wfdc and a2ml gene family. This upregulation likely underpins the thicker zona radiata in adhesive eggs, facilitating their attachment to substrates. This study represents the first elucidation of the ultrastructure of the zona radiata and gene expression patterns in different developmental stages of adhesive and semi-buoyant eggs of Culter alburnus, offering new perspectives for aquaculture research in understanding fish reproductive adaptations. Full article
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19 pages, 10865 KiB  
Article
Evaluation of Immunoprotective Activities of White Button Mushroom (Agaricus bisporus) Water Extract Against Major Pathogenic Bacteria (Aeromonas hydrophila or Vibrio fluvialis) in Goldfish (Carassius auratus)
by Shujun Sun, Jing Chen, Pan Cui, Xiaoxiao Yang, Yuhan Zheng, Zijian Ma, Yong Liu and Xiang Liu
Animals 2025, 15(15), 2257; https://doi.org/10.3390/ani15152257 - 1 Aug 2025
Viewed by 282
Abstract
The white button mushroom (Agaricus bisporus) is a widely cultivated edible and medicinal mushroom, which contains various active substances, and has application value against pathogenic bacteria in aquaculture. Firstly, A. bisporus water extract (AB-WE) was prepared. Through the detection kits, it [...] Read more.
The white button mushroom (Agaricus bisporus) is a widely cultivated edible and medicinal mushroom, which contains various active substances, and has application value against pathogenic bacteria in aquaculture. Firstly, A. bisporus water extract (AB-WE) was prepared. Through the detection kits, it was found that the polysaccharide, protein, and polyphenol components of AB-WE were 9.11%, 3.3%, and 1.5%, respectively. The 246 compounds were identified in AB-WE, and the major small-molecule components included L-Isoleucine, L-Tyrosine, L-Valine, and Linoleic acid by HPLC-Q Exactive-Orbitrap-MS. Secondly, the AB-WE was evaluated for its immunological activities through dietary administration and pathogen challenge (Aeromonas hydrophila and Vibrio fluvialis) in goldfish (Carassius auratus). The results showed that the levels of immune factors of acid phosphatase (ACP), alkaline phosphatase (AKP), and lysozyme (LZM) increased (p < 0.05) in goldfish, and the relative percentage survival of AB-WE against A. hydrophila and V. fluvialis were 80.00% (p < 0.05) and 81.82% (p < 0.05), respectively. The AB-WE reduced the bacterial content in renal tissue, enhanced the phagocytic activity of leukocytes, and exhibited antioxidant and anti-inflammatory effects by reducing the expression of antioxidant-related factors and inflammatory factors. Through histopathological and immunofluorescence techniques, it was found that AB-WE maintained the integrity of visceral tissues and reduced renal tissue apoptosis and DNA damage. Therefore, AB-WE exhibits immunoprotective activity against A. hydrophila and V. fluvialis infections in fish, and holds promise as an immunotherapeutic agent against major pathogenic bacteria in aquaculture. Full article
(This article belongs to the Section Aquatic Animals)
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8 pages, 222 KiB  
Perspective
Exploring the Potential of European Brown Shrimp (Crangon crangon) in Integrated Multi-Trophic Aquaculture: Towards Achieving Sustainable and Diversified Coastal Systems
by Ángel Urzúa and Marina Gebert
Oceans 2025, 6(3), 47; https://doi.org/10.3390/oceans6030047 - 31 Jul 2025
Viewed by 258
Abstract
Global marine coastal aquaculture increased by 6.7 million tons in 2024, with whiteleg shrimp (Penaeus vannamei) dominating crustacean production. However, reliance on a single species raises sustainability concerns, particularly in the face of climate change. Diversifying shrimp farming by cultivating native [...] Read more.
Global marine coastal aquaculture increased by 6.7 million tons in 2024, with whiteleg shrimp (Penaeus vannamei) dominating crustacean production. However, reliance on a single species raises sustainability concerns, particularly in the face of climate change. Diversifying shrimp farming by cultivating native species, such as the European brown shrimp (Crangon crangon), presents an opportunity to develop a sustainable blue bioeconomy in Europe. C. crangon holds significant commercial value, yet overexploitation has led to population declines. Integrated Multi-Trophic Aquaculture (IMTA) offers a viable solution by utilizing fish farm wastewater as a nutrient source, reducing both costs and environmental impact. Research efforts in Germany and other European nations are exploring IMTA’s potential by co-culturing shrimp with species like sea bream, sea bass, and salmon. The physiological adaptability and omnivorous diet of C. crangon further support its viability in aquaculture. However, critical knowledge gaps remain regarding its lipid metabolism, early ontogeny, and reproductive biology—factors essential for optimizing captive breeding. Future interdisciplinary research should refine larval culture techniques and develop sustainable co-culture models. Expanding C. crangon aquaculture aligns with the UN’s Sustainable Development Goals by enhancing food security, ecosystem resilience, and economic stability while reducing Europe’s reliance on seafood imports. Full article
12 pages, 4171 KiB  
Article
Effects of Paramisgurnus dabryanus Density on the Growth Performance of Pelophylax nigromaculatus and the Soil Microbial Communities Within a Rice–Frog–Loach Integrated Aquaculture System
by Chuanqi Yu, Yaping Li, Qiubai Zhou, Wenshuo Liu, Yuhong Liao, Jie Pan, Qi Chen, Haohua He and Zirui Wang
Microorganisms 2025, 13(8), 1794; https://doi.org/10.3390/microorganisms13081794 - 31 Jul 2025
Viewed by 314
Abstract
This investigation examines the influence of P. dabryanus density on the growth performance of P. nigromaculatus and the structural and functional dynamics of paddy soil microbial communities within a rice–frog–loach integrated aquaculture system. Field experiments were conducted with five density gradients of [...] Read more.
This investigation examines the influence of P. dabryanus density on the growth performance of P. nigromaculatus and the structural and functional dynamics of paddy soil microbial communities within a rice–frog–loach integrated aquaculture system. Field experiments were conducted with five density gradients of P. dabryanus (0.5, 1.0, 1.5, 2.0, and 2.5 × 104 individuals/667 m2), designated as RFLS0.5, RFLS1.0, RFLS1.5, RFLS2.0, and RFLS2.5, respectively. Control treatments included rice monoculture (RM) and rice–frog co-culture (RFS). These findings demonstrated that as the density of loach increased, the weight gain ratio of P. nigromaculatus showed a unimodal pattern, reaching its peak in RFLS1. Metagenomic analysis on paddy soil revealed that the RFLS1 facilitated the enrichment of nitrogen-fixing bacteria (Proteobacteria), while concurrently suppressing proliferation of the potential pathogen Pseudomonas aeruginosa and microbial markers in metal-contaminated environments of Usitatibacter rugosus. Further, functional profiling indicated that RFLS1 group reached a peak activity in amino acid metabolism (14.52 ± 0.09%) and carbohydrate metabolism (14.44 ± 0.06%) and showed a higher proportion of glycosyltransferase (GT) abundance (41.93 ± 0.02%) than other groups. In summary, the optimal stocking density of P. dabryanus in rice–frog–loach integrated systems was determined to be 1.0 × 104 individuals/667 m2. This density not only promotes the growth of P. nigromaculatus but also improves the structure of paddy soil microbial communities. Full article
(This article belongs to the Section Environmental Microbiology)
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18 pages, 2189 KiB  
Article
A Synergistic Role of Photosynthetic Bacteria and Fungal Community in Pollutant Removal in an Integrated Aquaculture Wastewater Bioremediation System
by Muhammad Naeem Ramzan, Ding Shen, Yingzhen Wei, Bilal Raza, Hongmei Yuan, Arslan Emmanuel, Zulqarnain Mushtaq and Zhongming Zheng
Biology 2025, 14(8), 959; https://doi.org/10.3390/biology14080959 - 30 Jul 2025
Viewed by 408
Abstract
This study addresses the understanding of fungal diversity and their bioremediation roles in an integrated aquaculture wastewater bioremediation system, an area less explored compared to bacteria, viruses, and protozoa. Despite the rapid advancement and affordability of molecular tools, insights into fungal communities remain [...] Read more.
This study addresses the understanding of fungal diversity and their bioremediation roles in an integrated aquaculture wastewater bioremediation system, an area less explored compared to bacteria, viruses, and protozoa. Despite the rapid advancement and affordability of molecular tools, insights into fungal communities remain vague, and interpreting environmental studies in an ecologically meaningful manner continues to pose challenges. To bridge this knowledge gap, we developed an integrated aquaculture wastewater bioremediation system, incorporating photosynthetic bacteria, and utilizing internal transcribed spacer (ITS) sequencing to analyze fungal community composition. Our findings indicate that the fungal community in aquaculture wastewater is predominantly composed of the phyla Ascomycota and Chytridiomycota, with dominant genera including Aspergillus, Hortea, and Ciliphora. FUNGuild, a user-friendly trait and character database operating at the genus level, facilitated the ecological interpretation of fungal functional groups. The analysis revealed significant negative correlations between nutrient levels (CODmn, NH4+-N, NO3-N, NO2-N, and PO4−3-P) and specific fungal functional groups, including epiphytes, animal pathogens, dung saprotrophs, plant pathogens, and ectomycorrhizal fungi. The removal rate for the CODmn, NH4+-N, NO3-N, NO2-N, and PO4−3-P were 71.42, 91.37, 88.80, 87.20, and 91.72% respectively. This study highlights the potential role of fungal communities in bioremediation processes and provides a framework for further ecological interpretation in aquaculture wastewater treatment systems. Full article
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