Search Results (11,371)

Antimicrobial use (AMU) in finfish aquaculture production raises concerns about the link between AMU and the development of antimicrobial resistance (AMR) in bacteria found in aquatic organisms and potential transmission to humans and the environment. The objective of this study was to describe the antimicrobial susceptibilities of a historical collection of bacterial isolates from diagnostic submissions from farmed finfish in British Columbia (BC), Canada. Antimicrobial susceptibility data were obtained from the BC Ministry of Agriculture via submissions to the Animal Health Centre for 2007 to 2018 for florfenicol (FLOR), oxytetracycline (OXY), trimethoprim-sulfadiazine (SXT), and triple-sulfa compound (TRI). There were 1237 unique isolates from all finfish species (68 unique bacterial species), of which 1042 were from Atlantic salmon. For all fish species, the most common bacterial species isolated were Aeromonas salmonicida (n = 174), Aliivibrio wodanis (n = 84), and Yersinia ruckeri (n = 79). Resistance was detected to most antimicrobials tested, but levels were generally low. Resistance to FLOR was only detected in A. salmonicida. Low annual isolate numbers precluded genera-specific annual comparisons for all pathogens. Multi-drug resistance was detected, but at low levels. These results provide an important baseline for antimicrobial susceptibility data from bacterial isolates that may cause disease in finfish aquaculture in BC, Canada that will support future Canadian AMR surveillance in farmed aquaculture. Full article

Veryovkina Cave is the world’s deepest known cave (2212 m deep). It is located in the Arabika Massif of Gagra Mountain in the Western Caucasus. Its microbiome remains unknown because of difficulties in access. Ten sediment samples were collected at vertical depths ranging from 300 m to 2204 m; they varied by substrate type, moisture content, and visitor accessibility. Total microbial DNA was isolated, and 16S ribosomal gene metabarcoding was applied for taxonomic identification. Seven samples showed reliable content, whereas three samples indicated no recoverable reads. Proteobacteria, Acidobacteria, and Actinobacteria were the most abundant phyla in total. Depth stratification of microbiota showed that (1) shallow wet clays were dominated by Acidimicrobia and Actinobacteria; (2) mid-depth wet clays showed the highest abundance of Nitrospira, Betaproteobacteria, and Vicinamibacter; and (3) deep, dry substrates were dominated by Thermoleophilia and Rubrobacteria. Multivariate analyses showed that substrate type and moisture tended to explain more variation in microbial abundance than depth or human activity. We demonstrate the presence of distinct ecological niches within the cave ecosystem, which emphasizes the role of local conditions in shaping microbial diversity. Full article

Chlamydia suis, a close relative of the human pathogen C. trachomatis, can be detected in the porcine gut, yet its prevalence and viability across intestinal segments remain poorly defined. This study aimed to assess the segment-specific prevalence, isolation success, and tetracycline susceptibility of C. suis in grower-finisher pigs. Jejunal, ileal, and colonic samples (n = 200 per intestinal segment) were collected from 600 pigs at slaughter and analyzed using C. suis-specific real-time PCR and culture. PCR revealed significantly higher detection rates in the colon (40%) than in the jejunum or ileum (both 4.5%), accompanied by significantly higher calculated bacterial loads in colonic samples. In contrast, viable C. suis was most frequently isolated from ileal material, indicating that the ileum may provide a more favorable condition for active bacterial replication. Among 24 culture-confirmed isolates, 75% were susceptible to tetracycline (MIC/MBC < 2 µg/mL), 12.5% exhibited an intermediate phenotype (2 µg/mL < MIC/MBC < 4 µg/mL) and another 12.5% were resistant (MIC/MBC > 4 µg/mL). Intermediate phenotypes were recovered from the jejunum and ileum, whereas resistant isolates were found in the ileum and colon. These findings suggest that the porcine colon may serve as an intestinal reservoir for C. suis, while the ileum supports more robust bacterial replication. Overall, these data contribute to our understanding of the intestinal ecology of C. suis under field conditions and its tetracycline susceptible patterns. Full article

Coronaviruses are worldwide-distributed RNA viruses with zoonotic potential and the ability to jump from one host species to another, including humans. Even after the COVID-19 pandemic, the search for new, biologically active substances with anti-coronavirus activity continues to be a critical milestone for human health protection. In the framework of a complex engineering strategy, we cultivated the microalgal species Scenedesmus acutus in two different innovative types of flat-plate photobioreactors (PBR1 and K1) for CO₂ utilization and biomass production with special features. Isolated extracts from the microalgal biomass of each one were compared for their anti-coronavirus potential. The design of both PBRs allows a hydrodynamic regime to achieve best fluid flow distribution in their sections, therefore providing the optimal so-called flashing light effect. Of course, this is achieved under well-controlled operational conditions. A strain of beta coronavirus 1 (BCoV, bovine coronavirus) replicated in MDBK cells was used as an in vitro model for the evaluation of the antiviral activity of both extracts. The cell viability, number of survived BCoV particles, and cytopathic effect were evaluated after pre-incubation of the virus with the extracts or direct treatment. The extracts’ samples exhibited evident antiviral activity—extract 1 (from PBR1) in concentrations ≥ 200 µg/mL and extract 2 (from K1) in concentrations ≥150 µg/mL. The ddPCR result revealed significant diminishment of the BCoV particles in samples treated with higher concentrations of the extracts. The phytochemical analysis for certain main groups of compounds (flavonoids, polyphenols, carotenoids, and lipids) showed some differences for both extracts, which could be a possible reason for the observed difference in the antiviral activity. In conclusion, the innovative PBRs are a good platform for studying microalgal growth kinetics by applying different stress conditions from hydrodynamics and mass transfer subsystems. Both extracts showed promising potential for the isolation of metabolites with antiviral activity against BCoV and could be an object for future pharmacological investigations. Full article

This study explores the taxonomic diversity, metabolic profile, and bioactivity of marine-derived actinomycetes isolated from sediments collected off the coast of Lisbon and Setúbal Peninsula, Portugal. The combined use of two sediment pre-treatments (heat shock and dry overnight) and four growth media with varying nutrient concentrations revealed that formulations 10% A1 and SWA were most effective for recovering diverse actinomycetes, including rare Actinomadura, resulting in a total of 142 cultivable strains closely related to 47 phylogenetic distinct species dominated by Streptomyces and Micromonospora. Antimicrobial screening against methicillin-resistant Staphylococcus aureus (MRSA, COL) and Escherichia coli (K12) identified 22 bioactive strains, with strain PTS-083 exhibiting the strongest activity against MRSA (MIC = 1.95 µg/mL) and a 98.30% 16S rRNA gene identity to S. chumphonensis, highlighting it as a strong candidate for further metabolite and genomic studies. Cytotoxicity assays against HCT-116 human colorectal adenocarcinoma cells revealed eight bioactive strains with potent anticancer activity for extracts from strains related to S. sundarbansensis, S. violaceorubidus, and S. aculeolatus (IC₅₀ < 0.005–5.08 µg/mL). Untargeted LC-MS/MS metabolomic analysis uncovered a wide array of secondary metabolites, including macrolides, siderophores, fatty acids, and cyclic peptides. Comparative analyses with other Portuguese coastal studies revealed both shared and distinctive metabolomic profiles, emphasizing the importance of exhaustive sampling, even at nearby locations, as their localized environmental conditions can influence metabolic diversity. These findings highlight Portugal’s coastal sediments as a rich and underexplored source of novel actinomycetes and bioactive compounds with promising pharmaceutical applications. Exhaustive sampling of marine sediment actinomycete communities, even at nearby locations, is crucial for discovering unique metabolites with potential biotechnological value. Full article

Background and Clinical Significance: Optic neuritis, an inflammatory demyelinating condition affecting the optic nerve, can present as an isolated phenomenon or as a harbinger of an underlying systemic disorder. While often associated with multiple sclerosis (MS), optic neuritis has been reported in the context of various infectious and inflammatory conditions, including human immunodeficiency virus (HIV) infection. Case Presentation: We describe a case of bilateral optic neuritis that led to the diagnosis of acute HIV infection in a young man actively engaged in bodybuilding, anabolic steroid use, and high-risk sexual behavior. The patient initially presented with an acute onset of vision loss, headache, and photophobia. Magnetic resonance imaging (MRI) findings confirmed demyelination of the optic nerves, and laboratory workup revealed acute HIV-1 infection. The patient improved following high-dose corticosteroids and initiation of antiretroviral therapy. Conclusions: This case highlights the need to consider systemic infections such as HIV in atypical presentations of optic neuritis. Full article

Background/Objectives: In food-producing animal (FPA) environments, healthy animals can act as reservoirs of potentially pathogenic Escherichia coli, which can be transmitted through the food chain to humans. This study aimed to evaluate cloacal E. coli in healthy Sicilian lambs subjected to an experimental feeding regimen by assessing bacterial levels, antimicrobial resistance, virulence traits, and the clonal relationships, as well as the impact of a pistachio skin as an agro-industrial by-product supplement during a 58-day feeding trial. Methods: A total of 295 E. coli isolates from the control (CTRL) and treatment (Treated) groups at initial time (T0) and final time (T1) were phenotypically and genotypically characterized using Kirby–Bauer antimicrobial testing, multiplex PCR for virulence genes, and PFGE for clonal analysis. Results: The feeding regimen did not significantly influence the prevalence, abundance, or virulence of the E. coli isolates. Shiga toxin-producing E. coli (STEC) were the most common pathotype, mainly carrying the stx1 gene, while the Enteroinvasive (EIEC) type was detected only sporadically. Enteropathogenic E. coli (EPEC) predominated at T0, while enteroaggregative E. coli (EAEC) at T1, and enterotoxigenic E. coli (ETEC), initially prevalent in Treated samples, disappeared by T1. Antimicrobial resistance profiles varied among isolates, with the highest resistance observed in the CTRL group. However, both groups exhibited high resistance to streptomycin, and 9% of CTRL isolates were multidrug resistant. A notable reduction in overall resistance rates, especially in the Treated group, was observed, indicating a dietary effect on the E. coli resistome. PFGE genotyping showed high genetic diversity, with resistance traits more frequently detected than virulence factors. Conclusions: This study highlights that healthy lambs serve as reservoirs for potentially human-pathogenic E. coli and suggests that dietary regimes could effectively reduce antibiotic resistance. Full article

As humanity continues to strive for extraplanetary exploration, which is quickly gaining marked governmental and industrial support and recognition, there are still substantial detriments to astronaut health during long-duration spaceflight (i.e., muscle atrophy) that must be addressed. The effects of long-duration spaceflight on muscle architecture, morphology, and function have been well documented since the Apollo and Space Shuttle Programs. Countermeasures focused on resistance or aerobic training, such as the Advanced Resistive Exercise Device, Multi-modal Exercise Device, flywheel exercise, and aerobic exercise on a mounted treadmill and/or a cycle ergometer with vibration isolation system, have been assessed to combat the functional and mechanical losses in muscle while astronauts are in low Earth orbit. However, a lesser-understood countermeasure to muscle atrophy during spaceflight is neuromuscular electrical muscle stimulation (NMES). Although utilization in spaceflight is limited, ground-based research on NMES in diseased or injured populations demonstrates its effectiveness as a promoter of muscle anabolism and growth. The previous literature has suggested the use of electrical muscle stimulation as a low-effort modality of exercise for astronauts, which could effectively enhance astronaut health and contribute to mission success. The efficacy and mechanisms of action of using NMES to attenuate atrophy in astronauts will be discussed in this review. Full article

The integration of artificial intelligence (AI) in the financial sector has seen a rapid increase over the past few years, offering new possibilities to streamline processes while ensuring profitability for lending institutions. With its data-driven capability, predicting the creditworthiness of applicants has demonstrated strong predictive performance, particularly for thin-file clients. Despite these advances, growing concerns regarding AI’s fairness, explainability, and regulatory accountability have increasingly limited its adoption in high-stakes credit decision-making. This paper presents a synthesis derived from a systematic literature review (SLR) of 43 peer-reviewed studies published between 2020 and 2025, focusing on AI-based credit scoring and addressing at least one of the performance, fairness, or explainability dimensions. Eligible studies were limited to peer-reviewed journal and conference articles (2020–2025) retrieved from IEEE Xplore, Scopus, Web of Science, and ScienceDirect (last searched: 30 September), examining AI-driven credit scoring in consumer or lending decision contexts. Guided by the Relevance, Rigor, Reproducibility, and Quality (3Rs&Q) appraisal framework, the review analyzes how existing approaches navigate the interplay among performance, fairness, and explainability under regulatory and human oversight considerations. The findings indicate that these dimensions are predominantly addressed in isolation, with limited attention to their joint treatment in regulated deployment settings. By consolidating empirical and conceptual evidence, this review provides actionable guidance for designing and deploying credit scoring models in practice. Full article

Antimicrobial Resistance (AMR) is a critical public health challenge requiring a coordinated One Health approach. Escherichia coli is a key indicator of AMR and fecal contamination, as well as a zoonotic pathogen transmissible from animals to humans, often through contaminated products like meat and eggs. This study assessed the presence of antibiotic-resistant E. coli and associated resistance genes in 248 cloacal/eggshell samples collected from four autochthonous Portuguese laying hen breeds (Preta Lusitânica, Amarela, Branca, and Pedrês Portuguesa) raised under low antibiotic exposure. A total of 81 E. coli isolates were analyzed for phenotypic antibiotic susceptibility (EUCAST/CLSI) and genotypic resistance, using PCR. Resistance to at least one antibiotic was observed in 98.0% of the isolates. Gentamicin resistance was particularly high (97.1% cloacal; 95.7% eggshell isolates), followed by tetracycline (31.0% cloacal; 41.0% eggshell) and ampicillin (14.0% cloacal; 24.0% eggshell). Multidrug resistance (MDR) was observed in 14.3% of cloacal and 17.4% of eggshell isolates. Notably, no resistance was found against critically important antibiotics. The most prevalent resistance genes were sul2 (45.0% cloacal; 48.0% eggshell) and bla_TEM (45.0% cloacal; 36.0% eggshell). Detection of resistant and MDR E. coli in low input systems suggests environmental acquisition, with chickens as reservoirs, highlighting the need for One Health surveillance. Full article

Background: Bovine mastitis (BM) remains an economically significant disease in the global dairy industry. Multidrug resistance (MDR) in Klebsiella pneumoniae and Klebsiella grimontii has increased in recent years, representing an area of concern related to BM. Methods: Bovine mastitis 1-DH1 and 2-DH2 isolates (n = 2) were investigated. Antimicrobial susceptibility testing was performed using the Neg-Urine-Combo98 panel. Antimicrobial resistance genes (ARGs), virulence factor (VF) genes and plasmid replicons were identified by whole-genome sequencing (WGS). Phylogenomic analyses were performed for a visual comparison of the genomes. Results: Phenotypically, isolates 1-DH1 and 2-DH2 were identified as K. pneumoniae-1DH1 and Klebsiella oxytoca, respectively; the latter was subsequently confirmed as K. grimontii-2DH2 by WGS. K. pneumoniae-1DH1 (20.0%, 5/25) exhibited phenotypic resistance to amoxicillin–clavulanic acid, ampicillin (AM), cefuroxime, colistin (Cl), and nitrofurantoin (Fd), whereas K. grimontii-2DH2 (8.0%, 2/25) was resistant to AM and nalidixic acid (NA). In total, 31 and 32 ARGs and 10 and 15 VF genes were identified in K. pneumoniae-1DH1 and K. grimontii-2DH2, respectively. Two plasmid replicons were detected in K. pneumoniae-1DH1 (one harboring the blaCTX-M ARG) compared to one in K. grimontii-2DH2 (encoding both the blaCTX-M ARG and the astA VF gene) isolates, respectively. Phylogenomic analysis showed that K. pneumoniae-1DH1 clustered most closely with human-derived K. pneumoniae isolates, whereas K. grimontii-2DH2 grouped with environmental K. grimontii isolates. Conclusions: Novel phenotypic resistance profiles were observed in the BM-associated K. pneumoniae-1DH1 (MDR, Cl and Fd) and K. grimontii-2DH2 (AM and NA) isolates. Notably, K. grimontii-2DH2 harbored a plasmid replicon carrying both the blaCTX-M ARG and the astA VF gene. Full article

Propolis is a resinous material produced by honeybees characterized by a high phenolic compound and flavonoid content. To date, several studies have examined the chemical composition of Mexican propolis from the south and north of the country. However, limited information is available on the chemical profile of propolis from central Mexico. The present study isolated six known compounds from propolis from central Mexico: one diterpene (sugiol, found for the first time in Mexican propolis), three flavonoids (chrysin, galangin 3-methyl ether, and 3,7-dimethoxyquercetin), a fatty acid (cerotic acid), and an unusual glycerol derivative (batyl alcohol). Moreover, LC-ESI-MS analysis conducted on the ethanolic extract led to the identification of three phenolic compounds and fourteen flavonoids commonly found in propolis. Lastly, the cytotoxic activity evaluation carried out on the ethanolic extract showed a decrease in the cell viability of human leukemia (Jurkat) cells in a concentration-dependent manner. Full article

Petroleum contamination poses a serious threat to human health and ecosystems worldwide, and microbially driven natural attenuation is an effective approach for accelerating hydrocarbon removal. Species of the genus Rhodococcus are recognized for their ability to degrade long chain petroleum hydrocarbons. However, their physiological traits and degradation mechanisms under alkaline conditions remain insufficiently understood. In this study, soil samples were collected from the Dagang oilfield in Tianjin, China, and Rhodococcus sp. A17 was isolated as an active indigenous strain for genomic and physiological characterization under high pH petroleum degradation conditions. The results showed that strain A17 grew optimally at 30 °C, pH 9.0, and 2% salinity. Petroleum hydrocarbon degradation reached 67.8% within 72 h, with a degradation half life of 34.2 h. Genome sequencing identified 18 oxygenase related genes involved in alkane degradation, including alkB, cytochrome P450 monooxygenases, and the long chain alkane monooxygenase ladA, together with four antibiotic resistance genes. Metabolite analysis suggested that alkane degradation might proceed via terminal and subterminal oxidation pathways. Overall, these findings indicate that Rhodococcus sp. A17 exhibits multiple adaptive traits that support its potential application in the bioremediation of petroleum contaminated alkaline environments. Full article

Background/Objectives: Canine otitis externa (OE) is frequently complicated by Pseudomonas aeruginosa (P. aeruginosa) infections, which are often associated with treatment failure due to intrinsic and acquired antimicrobial resistance. This study aimed to assess the prevalence and antimicrobial susceptibility of P. aeruginosa isolates from dogs with OE in Timiș County, Romania, with a focus on aminoglycosides and fluoroquinolones, to provide region-specific, clinically relevant data and address potential public health implications. Methods: Exudate samples were collected from 435 dogs diagnosed with OE across multiple veterinary clinics between 2022 and 2025. P. aeruginosa isolates were identified using standard culture methods, and antimicrobial susceptibility was determined using the VITEK^® 2 Compact system according to CLSI VET01, Fifth Edition (2018) guidelines. Tested antibiotics included amikacin, gentamicin, enrofloxacin, marbofloxacin, and pradofloxacin. Resistance profiles were analyzed at both the individual antibiotic and class levels. Results:P. aeruginosa was isolated in 14.0% (61/435) of dogs. All isolates were susceptible to amikacin and gentamicin, whereas resistance to enrofloxacin and marbofloxacin was 27.9%, and pradofloxacin resistance reached 63.9%. A total of 24.6% of isolates were susceptible to all tested antibiotics. The most frequent multidrug-resistant combination among fluoroquinolones was ENR (R) + MAR (R) + PRA (R), observed in 23.0% of isolates. Conclusions: This study provides recent, region-specific data on P. aeruginosa prevalence and antimicrobial susceptibility in canine OE, offering clinically relevant insights into aminoglycoside and fluoroquinolone resistance. The findings highlight the potential public health significance of resistant P. aeruginosa strains at the human–animal interface and underscore the importance of antimicrobial stewardship in veterinary practice. Full article

Water represents the fundamental source of life for all human and animal populations; however, its consumption has become increasingly hazardous due to high levels of pollution. Modern agricultural practices rely heavily on pesticides, which significantly contribute to water contamination and imbalances in aquatic ecosystems. Moreover, another critical category of pollutants consists of pathogenic bacteria that proliferate in aquatic environments, mainly originating from hospital and urban wastewater because of human activity. Considering these major environmental and health challenges, the present study aims to develop an optimized method for water treatment by synthesizing magnetic silica-based aerogels using a microfluidic vortex chip and systematically varying synthesis parameters to enhance material performance. The physicochemical properties of the aerogels were characterized using XRD, FTIR, SEM, EDS, and BET. The pesticide adsorption capacity of the materials was evaluated using FT-ICR HR-MS analysis, which demonstrated the high efficiency of the aerogels in removing a complex mixture of pesticides. In parallel, antimicrobial efficacy was assessed against E. faecalis, E. coli, and P. aeruginosa isolated from surface water, hospital wastewater, and the influent of a well-known wastewater treatment plant in Bucharest, as well as against ATCC reference strains. Additionally, the study investigated the biocompatibility and biological responses of magnetic aerogels using MTT assays, nitric oxide production, lactate dehydrogenase release, intracellular ROS levels, and quantification of total protein, malondialdehyde, and reduced glutathione in HaCaT and HEK293 cell lines. The results confirm the efficiency and application potential of the developed materials and emphasize the importance of optimizing synthesis to achieve high-performance aerogels for effective decontamination of polluted waters. Full article