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30 pages, 1816 KB  
Review
Overview of Enhancing Sludge Anaerobic Digestion Through Exogenous Materials: From Non-Recyclable to Recyclable Materials
by Hui Geng, Yu-Ting Zhang, Xiaohu Dai and Ying Xu
Sustainability 2026, 18(8), 3791; https://doi.org/10.3390/su18083791 (registering DOI) - 11 Apr 2026
Abstract
The introduction of exogenous materials offers a highly promising technical approach for enhancing the performance of sludge anaerobic digestion (AD). This review systematically presents the mechanisms and application effects of carbon-based materials, metal-based materials, inorganic mineral materials, and metal–carbon composites in enhancing sludge [...] Read more.
The introduction of exogenous materials offers a highly promising technical approach for enhancing the performance of sludge anaerobic digestion (AD). This review systematically presents the mechanisms and application effects of carbon-based materials, metal-based materials, inorganic mineral materials, and metal–carbon composites in enhancing sludge AD. In-depth mechanism analysis revealed that these materials primarily enhance both methane yields and system stability through multiple synergistic mechanisms, such as mediating interspecies electron and proton transfer, promoting biofilm formation as microbial carriers, and adsorbing inhibitors while enhancing the buffering capacity of the system. However, a critical analysis indicated that the inherent limitations of various materials in engineering applications, particularly in terms of stability and recyclability, are the fundamental obstacles hindering the engineering implementation of this technology. Based on the above analysis, this review further proposes that the field is shifting from a sole pursuit of efficiency enhancement to a paradigm that balances efficiency and sustainability. Developing new recyclable and circular material systems with both high efficiency and excellent recycling potential is crucial for promoting the development of sludge AD technology towards a green, low-carbon, and resource-cycling direction, and also provides key scientific and technological support for the circular economy transformation of the sludge treatment system. Full article
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20 pages, 5374 KB  
Article
Comparative Transcriptomic and ceRNA Network Analyses of Non-Coding and Coding RNAs in Heads of Apis mellifera Workers from Queenright and Queenless Colonies
by Yunchao Kan, Yanru Chu, Huixuan Shi, Zhaonan Zhang, Runqiang Liu, Zhongyin Zhang, Dandan Li and Huili Qiao
Int. J. Mol. Sci. 2026, 27(8), 3426; https://doi.org/10.3390/ijms27083426 (registering DOI) - 11 Apr 2026
Abstract
Emerging evidence indicates that non-coding RNAs (ncRNAs) play important regulatory roles in honeybee social behavior and development. However, the regulatory roles of ncRNAs in honeybees remain largely elusive. To systematically identify ncRNAs associated with queen-regulated ovary activation, we conducted whole-transcriptome sequencing on the [...] Read more.
Emerging evidence indicates that non-coding RNAs (ncRNAs) play important regulatory roles in honeybee social behavior and development. However, the regulatory roles of ncRNAs in honeybees remain largely elusive. To systematically identify ncRNAs associated with queen-regulated ovary activation, we conducted whole-transcriptome sequencing on the heads of Apis mellifera workers from queenright and queenless colonies. Subsequent bioinformatics analyses were conducted to profile differentially expressed (DE) RNAs and construct potential regulatory networks. High-quality sequencing data provided a foundation for subsequent analyses. This transcriptome data yielded 3968 lncRNA transcripts, comprising 3146 known and 822 novel candidates, all of which exhibited typical structural features of lncRNAs. Comparative expression analyses revealed that 246 lncRNAs, 1439 mRNAs, and 10 miRNAs were differentially expressed. Comprehensive functional analyses indicated that the identified DElncRNAs potentially regulate sensory perception-related target mRNAs via cis-regulation, and coordinate metabolic and proteostatic reprogramming via trans-regulation to support the transition to reproductive activation in workers. Furthermore, a competing endogenous RNA network was constructed which integrated 74 DElncRNAs, 5 DEmiRNAs, and 36 DEmRNAs to predict their potential post-transcriptional interactions. Our findings highlight a comprehensive analysis of ncRNAs and mRNAs in worker heads, providing a foundation for functional validation of their roles in honeybee ovary development. Full article
(This article belongs to the Section Molecular Biology)
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15 pages, 2316 KB  
Article
Egg Nutriomics: Bridging Comprehensive Profiling and Precision Modulation of Bioactive Nutrient Factors in Eggs
by Hao Ding, Ziyi Wang, Jieyu Han, Yuehong Pang, Fei Liu and Xiaofang Shen
Foods 2026, 15(8), 1330; https://doi.org/10.3390/foods15081330 (registering DOI) - 11 Apr 2026
Abstract
While global nutrient insufficiency remains a critical health challenge, eggs have emerged as a potential solution due to their profile as an accessible and nutrient-dense food source. To quantitatively assess this potential for mitigating nutrient insufficiencies and guide the production of nutrient-enriched eggs, [...] Read more.
While global nutrient insufficiency remains a critical health challenge, eggs have emerged as a potential solution due to their profile as an accessible and nutrient-dense food source. To quantitatively assess this potential for mitigating nutrient insufficiencies and guide the production of nutrient-enriched eggs, the study proposes the concept of egg nutriomics, establishing a comprehensive evaluation system with 35 indicators across seven nutritional dimensions (fatty acids, amino acids, vitamins, trace elements, pigments, antioxidant capacity, and dietary restriction factors). Methodologically, the system normalizes raw analytical data into standardized scores (0–100) using indicator-specific functional models, with weights rationally allocated based on the essentiality of the nutrients. These quantitative metrics are subsequently translated into intuitive results using visualization tools such as heatmaps and radar charts. This study applied this system to evaluate six commercial egg varieties (pasteurized, lutein-enriched, ω-3 enriched, animal welfare, low-cholesterol, and conventional cage eggs), profiling multidimensional nutrition that allows for the intuitive visualization of performance scores across distinct dimensions. These profiles extend beyond comprehensive evaluation by revealing specific quantitative advantages—such as ω-3 enriched eggs scoring 79 in the fatty acid dimension compared to 49 for conventional eggs—thus providing a reference to guide precision modulation as illustrated by a dietary ω-3 enrichment case study involving 200 laying hens. Building upon this foundation, the strategy empowers a shift from the sole pursuit of high yields to precision nutritional modulation. This multi-dimensional strategy bridges nutritional analysis with production control, facilitating the development of nutrient-dense eggs as a potential application to mitigate human malnutrition. Full article
(This article belongs to the Section Food Nutrition)
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24 pages, 6320 KB  
Article
Crashworthiness Optimization of Composite/Metal Hybrid Tubes with Triggering Holes
by Yan Ma, Zehui Huang, Hongbin Tang, Jianjiao Deng, Jingchun Wang, Shibin Wang, Zhiguo Zhang and Zhenjiang Wu
Designs 2026, 10(2), 44; https://doi.org/10.3390/designs10020044 - 10 Apr 2026
Abstract
Due to high specific energy absorption, composite/metal hybrid multi-cell thin-walled tubes hold significant potential in the field of automotive passive safety. However, the material coupling effect enhancing SEA often elevated the initial peak crushing force, reducing crushing force efficiency and compromising occupant protection. [...] Read more.
Due to high specific energy absorption, composite/metal hybrid multi-cell thin-walled tubes hold significant potential in the field of automotive passive safety. However, the material coupling effect enhancing SEA often elevated the initial peak crushing force, reducing crushing force efficiency and compromising occupant protection. To balance SEA and CFE, trigger holes were introduced as an induced deformation mechanism for hybrid tubes to reduce IPCF while preserving SEA, with the optimized perforated configuration yielding higher CFE than the non-perforated counterpart. A high-fidelity finite element model of the hybrid tube was developed and experimentally validated, and the influences of induced structural parameters on SEA and CFE were investigated. Given the strong nonlinear coupling between trigger parameters and crashworthiness, a multilayer perceptron surrogate model was constructed using 200 optimal Latin hypercube sampling samples (20 for validation). A Q-learning enhanced particle swarm optimization (QL-PSO) algorithm was adopted for optimization, with reinforcement learning dynamically adjusting PSO parameters to balance global exploration and local exploitation. Finite element simulations validated that the proposed method achieved a favorable SEA-CFE trade-off, with SEA and CFE improved by 12.02% and 16.39% respectively, outperforming reported configurations. Compared with standard PSO, QL-PSO exhibited superior search efficiency and inverse mapping accuracy, with 22% higher optimization efficiency and full compliance with inverse design performance targets. This study provided valuable guidance for the design of thin-walled energy-absorbing structures in multi-material vehicle bodies. Full article
(This article belongs to the Section Vehicle Engineering Design)
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20 pages, 3444 KB  
Article
Microbial Bio-Inoculation Effects on the Seed Germination Dynamics and Field Performance of Pea (Pisum sativum L.) under Osmotic Stress and Fertilization in the Amazonas Region of Peru
by Francisco Guevara-Fernández, Sebastian Casas-Niño, Milagros Ninoska Munoz-Salas, Wagner Meza-Maicelo, Manuel Oliva-Cruz and Flavio Lozano-Isla
AgriEngineering 2026, 8(4), 155; https://doi.org/10.3390/agriengineering8040155 - 10 Apr 2026
Abstract
Microbial bio-inoculants have been proposed as management tools to enhance crop performance under variable environmental conditions; however, their effectiveness is often influenced by site-specific factors. This study evaluated the effects of bio-inoculation on seed germination and seedling vigor of pea under osmotic stress [...] Read more.
Microbial bio-inoculants have been proposed as management tools to enhance crop performance under variable environmental conditions; however, their effectiveness is often influenced by site-specific factors. This study evaluated the effects of bio-inoculation on seed germination and seedling vigor of pea under osmotic stress induced by polyethylene glycol (PEG 6000), and its interaction with two fertilization levels (75% and 100% of the recommended dose) under field conditions in the Amazonas region of Peru. Under laboratory conditions, germination percentage remained high across all treatments (93.3–100%) and was not affected by bio-inoculation or osmotic potential; however, osmotic stress altered germination dynamics, increasing mean germination time from 1.85–2.09 days at 0 MPa to 2.26–2.43 days at −0.8 MPa, while germination synchrony and seedling vigor decreased as stress increased. The seedling vigor index reached maximum values at −0.2 MPa (4.47–5.29) and declined at −0.8 MPa (1.50–2.00), and multivariate analyses showed that variation in germination responses was mainly associated with germination timing and vigor rather than seed viability. Under field conditions, no significant effects of fertilization level, microbial bio-inoculation, or their interaction were detected on agronomic traits or yield, although variability between locations was observed; plant height ranged from 38.5–46.3 cm in Lamud and from 100.6–108.3 cm in Molinopampa, while grain yield varied from 698–1846 kg/ha and 8771–9919 kg/ha, respectively. Overall, environmental conditions exerted a stronger influence than microbial bio-inoculation on germination dynamics and field productivity, while the findings provide practical guidance for improving pea production with bio-inoculants and optimized fertilization. Full article
(This article belongs to the Section Sustainable Bioresource and Bioprocess Engineering)
18 pages, 8588 KB  
Article
Establishment of an Organogenesis-Based Regeneration System and Induction of Somatic Embryogenesis in Catalpa ovata
by Pingan Bao, Xingping Huo, Jingshuang Sun, Guanzheng Qu, Wenjun Ma, Junhui Wang and Ruiyang Hu
Plants 2026, 15(8), 1177; https://doi.org/10.3390/plants15081177 - 10 Apr 2026
Abstract
To overcome the seasonal constraints of explant availability and facilitate genetic improvement in Catalpa ovata, this study established a dual-pathway in vitro regeneration system (encompassing adventitious shoot organogenesis and somatic embryogenesis) using mature zygotic embryos. We systematically evaluated the synergistic effects of [...] Read more.
To overcome the seasonal constraints of explant availability and facilitate genetic improvement in Catalpa ovata, this study established a dual-pathway in vitro regeneration system (encompassing adventitious shoot organogenesis and somatic embryogenesis) using mature zygotic embryos. We systematically evaluated the synergistic effects of maternal genotypes, plant growth regulators (PGRs), basal media, and the histone deacetylase inhibitor Trichostatin A (TSA). Genotype screening revealed significant divergence in regenerative potential, with the half-sib family 32F17 exhibiting superior responsiveness (84.7% callus induction). A high cytokinin-to-auxin ratio (ZA3 medium) optimally drove direct shoot organogenesis. For adventitious shoot proliferation, the addition of TDZ significantly improved the multiplication coefficient (up to 2.99 on ZB4 medium), although a physiological trade-off with shoot elongation was observed. In parallel, the application of 10 µM TSA significantly enhanced somatic embryogenesis from embryogenic calli, effectively alleviating the inhibitory constraints of exogenous PGRs. For rhizogenesis, the DKW basal medium proved superior to half-strength MS, with the ZE3 treatment (0.1 mg·L−1 NAA + 0.1 mg·L−1 IBA) yielding the highest rooting frequency (69.6%) and robust root architecture. Notably, while somatic embryo conversion remained recalcitrant, plantlets derived exclusively from the adventitious shoot organogenesis pathway were successfully acclimatized ex vitro. These transplanted plantlets exhibited consistently high survival rates (83.1–84.4%) across all tested genotypes, effectively overcoming the initial genotype-dependent recalcitrance. Collectively, this optimized protocol provides a reliable technical platform for the large-scale clonal propagation and biotechnological breeding of C. ovata. Full article
(This article belongs to the Special Issue Sexual and Asexual Reproduction in Forest Plants—2nd Edition)
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16 pages, 1605 KB  
Article
Green Enzyme Innovation: Improved Laundry Detergent Protease Production Through Solid-State Fermentation
by José Juan Buenrostro-Figueroa, Sergio Huerta-Ochoa, Cristóbal Noé Aguilar, María Isabel Reyes-Arreozola, Francisco José Fernández and Lilia Arely Prado-Barragán
Fermentation 2026, 12(4), 194; https://doi.org/10.3390/fermentation12040194 - 10 Apr 2026
Abstract
The increasing demand for environmentally sustainable and efficient laundry detergents has prompted the exploration of innovative biotechnological solutions. This study aims to integrate solid fermentation and by-product valorization for high-quality proteases suitable for laundry detergents. Of 486 strains isolated from fruit by-products, 9 [...] Read more.
The increasing demand for environmentally sustainable and efficient laundry detergents has prompted the exploration of innovative biotechnological solutions. This study aims to integrate solid fermentation and by-product valorization for high-quality proteases suitable for laundry detergents. Of 486 strains isolated from fruit by-products, 9 were selected for their proteolytic activity, but only 3 showed proteolytic activity in the presence of detergent components. Strain M17, identified as Yarrowia lipolytica (Yl), proved to be the most effective in producing proteolytic extracts with activity similar to that found in commercial detergents. The produced proteases were incorporated into laundry detergent formulations, and their enzyme activity was compared with that of commercial laundry detergents. The results showed that the proteolytic extracts have enzyme activity similar to that of commercial laundry detergents. Culture media were developed to enhance protease production using fruit by-products. The highest activity (43.71 U (g dm)−1) was achieved at C/N = 20.04, while the best productivity (1.37 U (g dm·h)−1) at pH 7.0 and 30 °C was observed. The results demonstrate that culture media based on fruits and vegetable by-products enhance protease yield and activity. This approach not only reduces waste but also adds value to natural resources through an environmentally friendly process. This study underscores the potential of combining solid-state fermentation with by-products. Using Yl in combination with fruit and vegetable by-products is a practical, eco-friendly method for producing high-quality proteases for laundry detergents. This green enzyme innovation offers significant promise for advancing the detergent proteolytic enzymes and promoting sustainable practices in by-product management. Full article
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23 pages, 3629 KB  
Article
Characterization of Mannose-Rich Exopolysaccharides from Kefir Lactic Acid Bacteria and Their Techno-Functional Potential in Fermented Milk
by Tingting Zhang, Yunyan Li, Jingjing Leng, Zi Ye, Zhufang Duan, Bingfang Huang, Chunqiu Zhang, Muhammad Imran, Muhammad Azam, Bohan Sun and Yanglei Yi
Foods 2026, 15(8), 1322; https://doi.org/10.3390/foods15081322 - 10 Apr 2026
Abstract
Kefir grains are a valuable source of exopolysaccharide (EPS)-producing lactic acid bacteria (LAB) with potential applications in fermented dairy products. In this study, LAB isolated from kefir grains originating from five regions were screened for EPS production and probiotic-related properties. Three strains, Lactiplantibacillus [...] Read more.
Kefir grains are a valuable source of exopolysaccharide (EPS)-producing lactic acid bacteria (LAB) with potential applications in fermented dairy products. In this study, LAB isolated from kefir grains originating from five regions were screened for EPS production and probiotic-related properties. Three strains, Lactiplantibacillus plantarum XZ61, Lactobacillus kefiranofaciens EG10, and Lentilactobacillus kefiri EG12, were selected based on high EPS yield, antimicrobial activity, antioxidant capacity, and tolerance to acidic and bile salt conditions. After optimization, the highest EPS yield (539.57 μg/mL) was obtained from strain EG10.The purified EPS consisted of two molecular weight fractions (≈1.4 and 23~25 kDa) and was rich in mannose (33.38~61.58%). Among the three EPS, EG10-EPS exhibited superior emulsifying and flocculating properties comparable to commercial stabilizers, as well as notable ABTS•+ and hydroxyl radical scavenging activities. Furthermore, co-fermentation of L. kefiranofaciens EG10 with conventional yogurt starter cultures significantly improved exopolysaccharide content, water-holding capacity, texture, and antioxidant activity of fermented milk, particularly in cow milk. These results demonstrate the potential of kefir-derived EPS-producing LAB as natural functional cultures for fermented dairy applications. Full article
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37 pages, 1073 KB  
Article
Optimizing the Classic and the Energy-Efficient Permutation Flowshop Scheduling Problem with a Hybrid Tyrannosaurus Rex Optimization Algorithm
by Maria Tsiftsoglou, Yannis Marinakis and Magdalene Marinaki
Biomimetics 2026, 11(4), 262; https://doi.org/10.3390/biomimetics11040262 - 10 Apr 2026
Abstract
This paper introduces a Hybrid Tyrannosaurus Rex Optimization Algorithm (Hybrid TROA) combined with Variable Neighborhood Search (VNS), two variations of the Path Relinking strategy, and a randomized Nawaz–Enscore–Ham (NEH) heuristic to address the Permutation Flowshop Scheduling Problem (PFSP). The TROA is a novel [...] Read more.
This paper introduces a Hybrid Tyrannosaurus Rex Optimization Algorithm (Hybrid TROA) combined with Variable Neighborhood Search (VNS), two variations of the Path Relinking strategy, and a randomized Nawaz–Enscore–Ham (NEH) heuristic to address the Permutation Flowshop Scheduling Problem (PFSP). The TROA is a novel bio-inspired meta-heuristic algorithm modeled on the hunting behavior of the prehistoric Tyrannosaurus Rex. Leveraging the potential of this newly developed and efficient algorithm, we propose a framework in which an initial population of solutions is generated using the randomized NEH heuristic. These solutions are then further optimized through VNS and Path Relinking, yielding highly satisfactory results for the PFSP. First, we consider two optimization criteria separately: the makespan and the total flow time. Next, we conduct a comparative study of the Hybrid TROA against other prominent meta-heuristics, along with a statistical analysis using non-parametric tests, to determine the best-performing method for each objective. According to our findings, the Hybrid TROA proves to be the most suitable method in this study for minimizing both targets. Finally, recognizing that contemporary industry demands both high productivity and energy efficiency, we propose an energy-efficient version of the classic PFSP, simultaneously considering two criteria for optimization: the makespan and total energy consumption. Our study introduces a novel objective function that achieves balanced optimization by integrating both criteria. Full article
27 pages, 3650 KB  
Article
Effect of the Physical and Chemical Characteristics of Polycarboxylate Ether Superplasticizers on the Spreading of Calcined Clays with Different Metakaolinite Contents Suspended in Synthetic Cement Pore Solution
by Suylan Matias Cruz, Ítalo Ribeiro Gonçalves Lima, Maria José Souza Serafim, Jorge Iván Tobón and João Henrique Silva Rêgo
Materials 2026, 19(8), 1516; https://doi.org/10.3390/ma19081516 - 10 Apr 2026
Abstract
This study investigates the influence of the physical and chemical characteristics of three polycarboxylate ether (PCE) superplasticizers—differing in main-chain length, side-chain density, and dispersing-to-stabilizing polymer ratio (75:25, 50:50, and 25:75)—on the dispersion of calcined clays with varying metakaolinite contents (30.04–74.91 wt%) in synthetic [...] Read more.
This study investigates the influence of the physical and chemical characteristics of three polycarboxylate ether (PCE) superplasticizers—differing in main-chain length, side-chain density, and dispersing-to-stabilizing polymer ratio (75:25, 50:50, and 25:75)—on the dispersion of calcined clays with varying metakaolinite contents (30.04–74.91 wt%) in synthetic cement pore solution (SCPS). Clays were characterized by XRF, XRD, TGA, FTIR, BET, Blaine fineness, and particle size distribution; PCEs were characterized by FTIR, 1H NMR, GPC, and zeta potential. Dispersion was assessed via mini-slump tests for water demand, PCE dosage to achieve 260 ± 5 mm spread, and slump retention over 120 min, quantified by a normalized spread retention index (SR120). Results revealed that clays with a higher metakaolinite content (58.45–74.91 wt%) and Blaine fineness (up to 13.116 m2/g) required two times higher PCE dosages and exhibited greater water demand due to enhanced surface reactivity and Ca2+/carboxylate affinity. Slump retention depended on PCE–clay compatibility: at a low metakaolinite content (30.04 wt%), all PCEs yielded SR120 ≈ 1; at higher contents, dispersing-rich PCEs (e.g., 75:25 ratio) sustained superior retention (SR120 > 1 in intermediate cases), while stabilizing-rich variants showed rapid loss. Zeta potential values remained close to zero due to the high ionic strength of the SCPS, indicating that electrostatic interactions play only a secondary role in the dispersion process, while steric effects govern the performance of the investigated PCEs. Overall, optimal PCE selection requires matching polymer architecture to clay reactivity for effective dispersion and fluidity retention in sustainable calcined clay systems. Full article
(This article belongs to the Section Construction and Building Materials)
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31 pages, 2759 KB  
Article
Uncertainty-Aware Groundwater Potential Mapping in Arid Basement Terrain Using AHP and Dirichlet-Based Monte Carlo Simulation: Evidence from the Sudanese Nubian Shield
by Mahmoud M. Kazem, Fadlelsaid A. Mohammed, Abazar M. A. Daoud and Tamás Buday
Water 2026, 18(8), 901; https://doi.org/10.3390/w18080901 - 9 Apr 2026
Abstract
Groundwater sustains human activity in arid crystalline terrains where surface water is scarce and hydrogeological data are limited. However, most groundwater potential mapping approaches depend on deterministic weighting methods without quantifying model variability. This study describes an uncertainty-aware Remote Sensing and Geographic Information [...] Read more.
Groundwater sustains human activity in arid crystalline terrains where surface water is scarce and hydrogeological data are limited. However, most groundwater potential mapping approaches depend on deterministic weighting methods without quantifying model variability. This study describes an uncertainty-aware Remote Sensing and Geographic Information Systems (RS–GIS) framework to delineate groundwater potential zones in the Wadi Arab Watershed, Northeastern Sudan. Nine thematic factors—geology and lithology, rainfall, slope, drainage density, lineament density, soil, land use/land cover, topographic wetness index, and height above nearest drainage—were integrated using the Analytical Hierarchy Process (AHP), with acceptable consistency (Consistency Ratio (CR) < 0.1). To address subjectivity in weights, a Dirichlet-based Monte Carlo simulation (500 iterations) was implemented to perturb AHP weights whilst preserving compositional constraints. The resulting Groundwater Potential Index (GWPI) classified 32.69% of the watershed as high to very high potential, primarily associated with alluvial deposits and fractured crystalline rocks. Model validation using Receiver Operating Characteristic (ROC) analysis yielded an Area Under the Curve (AUC) of 0.704, indicating acceptable predictive performance. Uncertainty assessment showed low spatial variability (mean standard deviation (SD) = 0.215) and stable exceedance probabilities, verifying the robustness of predicted high-potential zones. The proposed probabilistic AHP framework augments decision reliability and provides a transferable, cost-effective tool for groundwater planning in data-limited arid basement environments. Full article
(This article belongs to the Section Hydrogeology)
19 pages, 7551 KB  
Article
Unraveling the Molecular Mechanism of Bider Marking Formation in Dun Mongolian Horses Through Transcriptome Sequencing
by Tana An and Manglai Dugarjaviin
Animals 2026, 16(8), 1145; https://doi.org/10.3390/ani16081145 - 9 Apr 2026
Abstract
(1) Background: The “Bider” marking refers to the symmetrical black stripes distributed on the shoulder blades of Dun Mongolian horses, representing an ancestral trait of significant genetic value. However, the molecular mechanisms underlying its formation remain unclear. This study aims to elucidate the [...] Read more.
(1) Background: The “Bider” marking refers to the symmetrical black stripes distributed on the shoulder blades of Dun Mongolian horses, representing an ancestral trait of significant genetic value. However, the molecular mechanisms underlying its formation remain unclear. This study aims to elucidate the molecular basis of these markings by comparing transcriptomic differences in skin tissues from variously pigmented areas of Mongolian horses’ “Bider” patterns. (2) Methods: Using three Dun Mongolian horses as subjects, skin tissue samples were collected from their shoulders (dark-marked and light-marked areas), dorsal midline, and croup regions for transcriptome sequencing. Differentially expressed genes were identified based on sequencing data, followed by Gene Ontology (GO) functional annotation and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analysis. Key findings were validated through quantitative reverse transcription polymerase chain reaction (qRT-PCR). (3) Results: The sequencing yielded approximately 893 million high-quality clean reads, with an overall alignment rate exceeding 96%. A total of 140 to 775 differentially expressed genes were identified. GO enrichment analysis revealed that these genes were significantly enriched in biological processes related to pigment metabolism, skin and hair follicle development, signal transduction (including calcium and cyclic guanosine monophosphate (cGMP) signaling), and immune regulation. KEGG analysis further indicated that multiple pathways closely associated with pigment regulation, including the calcium signaling pathway, tyrosine metabolism, cyclic adenosine monophosphate (cAMP) signaling pathway, and melanoma pathway, were significantly enriched across different tissue comparison groups, suggesting their potential key roles in coat color phenotype formation. The reliability of the sequencing data was corroborated by the results of qRT-PCR validation. (4) Conclusions: This study conducted a transcriptome analysis of skin samples from various pigmented regions of the Dun Mongolian horse’s Bider marking, revealing that the formation of this marking is associated with the differential expression of numerous genes and is co-regulated by multiple pigment-related signaling pathways. Full article
(This article belongs to the Special Issue Equine Genetics, Evolution, and Breeds)
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14 pages, 574 KB  
Article
Prognostic Value of the Neutrophil Percentage-to-Albumin Ratio in Acute Non-Variceal Upper Gastrointestinal Bleeding
by Ahmet Yavuz, Ümit Karabulut, Berat Ebik, Mustafa Zanyar Akkuzu and Ferhat Bingöl
J. Clin. Med. 2026, 15(8), 2854; https://doi.org/10.3390/jcm15082854 - 9 Apr 2026
Abstract
Background: Early risk assessment in non-variceal upper gastrointestinal bleeding (NVUGIB) is essential for guiding clinical management. The neutrophil percentage-to-albumin ratio (NPAR) has recently been proposed as a marker reflecting both inflammatory response and physiological reserve. This study aimed to evaluate the prognostic value [...] Read more.
Background: Early risk assessment in non-variceal upper gastrointestinal bleeding (NVUGIB) is essential for guiding clinical management. The neutrophil percentage-to-albumin ratio (NPAR) has recently been proposed as a marker reflecting both inflammatory response and physiological reserve. This study aimed to evaluate the prognostic value of NPAR for in-hospital mortality and its relationship with established risk scores in patients with NVUGIB. Methods: This retrospective observational study included 94 patients hospitalized with NVUGIB. NPAR was calculated using laboratory parameters obtained at admission. Patients were stratified according to AIMS65 (<2 vs. ≥2) and Rockall (<5 vs. ≥5) scores. In addition, inflammation-based indices, including neutrophil-to-lymphocyte ratio (NLR), platelet-to-lymphocyte ratio (PLR), and systemic immune-inflammation index (SII), were calculated. Predictive performance was evaluated using receiver operating characteristic (ROC) curve analysis, and associations with clinical outcomes were assessed. Results: The in-hospital mortality rate was 12.8%. NPAR values were significantly higher in patients with AIMS65 ≥ 2 and Rockall ≥ 5 (p < 0.001 for both). NPAR demonstrated good discriminative ability for AIMS65 ≥ 2 (AUC: 0.843) and moderate performance for Rockall ≥ 5 (AUC: 0.714). For mortality prediction, NPAR showed excellent performance (AUC: 0.900). A cut-off value of 27.4 yielded a sensitivity of 91.7% and a specificity of 75.6%. Higher NPAR values were associated with increased mortality risk (OR 31.9, 95% CI: 3.88–102.59, p < 0.001), while the negative predictive value was high (98.4%). In contrast, NLR, PLR, and SII showed limited predictive value for in-hospital mortality. Conclusions: NPAR shows promise as a potential prognostic biomarker for assessing disease severity and in-hospital mortality in NVUGIB. Its high negative predictive value and association with established risk scores suggest that it may complement current risk stratification approaches. However, these findings should be considered preliminary, given the retrospective design and limited sample size, and require validation in larger prospective studies. Full article
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28 pages, 1920 KB  
Article
Aspen Plus®-Validated CCD–RSM Optimisation of Pressurised Ethanol/Water Extraction for Sustainable Recovery of Antioxidant and Photoprotective Constituents from Inula salicina L.
by Marius Užupis, Michail Syrpas, Andrius Jaskūnas, Petras Rimantas Venskutonis and Vaida Kitrytė-Syrpa
Antioxidants 2026, 15(4), 466; https://doi.org/10.3390/antiox15040466 - 9 Apr 2026
Abstract
This study presents an integrated approach for producing antioxidant-rich polar fractions from Inula salicina L. via pressurised ethanol/water extraction (PLE-EtOH/H2O), optimised by coupling a central composite design and response surface methodology (CCD-RSM) with Aspen Plus® simulation. The effects of PLE [...] Read more.
This study presents an integrated approach for producing antioxidant-rich polar fractions from Inula salicina L. via pressurised ethanol/water extraction (PLE-EtOH/H2O), optimised by coupling a central composite design and response surface methodology (CCD-RSM) with Aspen Plus® simulation. The effects of PLE temperature, extraction time, and EtOH/H2O ratio for yield, total phenolic (TPC) and flavonoid (TFC) content, and Trolox equivalent antioxidant capacity (TEAC) measured in ABTS•+-scavenging, cupric ion reducing antioxidant (CUPRAC) and oxygen radical absorbance (ORAC) assays were assessed via a multi-response optimisation approach. Optimal conditions were set at 82 °C, 27 min, and 60% EtOH (v/v), yielding ~29 g extract per 100 g plant material, characterised by high TPC (227 mg GAE/g), TFC (34 mg QE/g), and TEAC values in the CUPRAC (1473 mg TE/g), ABTS (869 mg TE/g), and ORAC assays (1165 mg TE/g). The TPC and TEAC values of the post-extraction residue were >92% lower than those of unextracted I. salicina, confirming efficient recovery of the major portion of antioxidant-active constituents by PLE-EtOH/H2O. The high in vitro radical scavenging capacity, reducing power, and photoprotective potential (sun protection factor ~50 at 0.5 mg/mL) of the I. salicina extract are consistent with its phenolic-rich composition, with chlorogenic acid (~97 mg/g extract) and its derivatives being the major constituents. The validated Aspen Plus® model closely aligned with the CCD-RSM predictions, supporting process scale-up and energy feasibility and demonstrating an industry-relevant, green-solvent PLE process for producing higher value-added I. salicina fractions with potential applications in the food, pharmaceutical, nutraceutical, and cosmetic sectors. Full article
(This article belongs to the Special Issue Sustainable Strategies for Natural Antioxidant Utilization)
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