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21 pages, 2856 KB  
Article
Modeling Dynamic Risk Perception Using Large Language Model (LLM) Agents
by He Wen, Mojtaba Parsaee and Zaman Sajid
AI 2025, 6(11), 296; https://doi.org/10.3390/ai6110296 - 19 Nov 2025
Viewed by 1140
Abstract
Background: Understanding how accident risk escalates during unfolding industrial events is essential for developing intelligent safety systems. This study proposes a large language model (LLM)-based framework that simulates human-like risk reasoning over sequential accident precursors. Methods: Using 100 investigation reports from [...] Read more.
Background: Understanding how accident risk escalates during unfolding industrial events is essential for developing intelligent safety systems. This study proposes a large language model (LLM)-based framework that simulates human-like risk reasoning over sequential accident precursors. Methods: Using 100 investigation reports from the U.S. Chemical Safety Board (CSB), two Generative Pre-trained Transformer (GPT) agents were developed: (1) an Accident Precursor Extractor to identify and classify time-ordered events, and (2) a Subjective Probability Estimator to update perceived accident likelihood as precursors unfold. Results: The subjective accident probability increases near-linearly, with an average escalation of 8.0% ± 0.9% per precursor (p<0.05). A consistent tipping point occurs at the fourth precursor, marking a perceptual shift to high-risk awareness. Across 90 analyzed cases, Agent 1 achieved 0.88 precision and 0.84 recall, while Agent 2 reproduced human-like probabilistic reasoning within ±0.08 of expert baselines. The magnitude of escalation differed across precursor types. Organizational factors were perceived as the highest risk (median = 0.56), followed by human error (median = 0.47). Technical and environmental factors demonstrated comparatively smaller effects. Conclusions: These findings confirm that LLM agents can emulate Bayesian-like updating in dynamic risk perception, offering a scalable and explainable foundation for adaptive, sequence-aware safety monitoring in safety-critical systems. Full article
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30 pages, 20231 KB  
Article
Effect of Sedimentary Environment on Mudrock Lithofacies and Organic Matter Enrichment in a Freshwater Lacustrine Basin: Insight from the Triassic Chang 7 Member in the Ordos Basin, China
by Meizhou Zhang, Xiaomin Zhu, Wenming Ji, Xingyue Lin and Lei Ye
Sustainability 2025, 17(22), 10248; https://doi.org/10.3390/su172210248 - 16 Nov 2025
Viewed by 404
Abstract
Gradually replacing fossil fuels with renewable energy constitutes a long-term strategy for achieving sustainable development. In the short term, it is necessary to explore unconventional oil and gas resources to support current economic sustainability and to secure essential time for the energy transition. [...] Read more.
Gradually replacing fossil fuels with renewable energy constitutes a long-term strategy for achieving sustainable development. In the short term, it is necessary to explore unconventional oil and gas resources to support current economic sustainability and to secure essential time for the energy transition. With the continuous growth in global energy demand, unconventional resources such as shale oil and shale gas have become important alternative energy sources. Lacustrine mudrock successions demonstrate significant potential for unconventional oil and gas resources. However, the unclear understanding of how paleoenvironmental evolution influences lithofacies and organic matter enrichment restricts the optimization of shale oil reservoirs and evaluation of shale oil resources, thereby hindering the progress of lacustrine shale oil exploration and development. The mudrocks in the Chang 7 Member of the Triassic Yanchang Formation, Ordos Basin, were deposited in a pro-delta to a deep lacustrine environment and are rich in shale oil resources. Through petrographic, sedimentological, sequence stratigraphic, and geochemical analyses, this study reveals how the evolution of the paleoenvironment controlled the development of mudrocks and the enrichment of organic matter, and establishes a sedimentary model for freshwater lacustrine systems. Six lithofacies have been identified within the mudrock interval of the Chang 7 Member. According to the T-R (transgressive–regressive) sequence model, the Chang 7 Member can be subdivided into three fourth-order sequences, termed Parasequence Set 1–3 (PPS1–3). Mudrock is predominantly developed in the fourth-order sequences PSS1 and PSS2. The PSS1 and the lower part of PSS2 consist of lithofacies 1–4, representing semi-deep to deep lacustrine deposits. The upper part of PSS2 develops lithofacies 5, representing shallow lacustrine to pro-delta deposits. Fluctuations of the lake level controlled the vertical stacking of lithofacies and the transition in depositional mechanisms. During lake-level rise, bottom currents shifted to suspension settling, whereas the opposite occurred during lake-level fall. The organic matter is derived from algae, and its enrichment is jointly controlled by productivity and the redox conditions. Volcanic–hydrothermal activity and a humid climate promoted high productivity in the water body. This high productivity promotes dyoxic conditions in the bottom water. Fourth-order relative lake-level fluctuations also influence organic matter enrichment. During lake-level rise, increased productivity coupled with reduced consumption and dilution favors organic matter enrichment. Conversely, organic matter accumulation is inhibited during lake-level fall. Ultimately, a depositional model for a freshwater lacustrine basin under a humid to semi-humid climatic background was established. This paper elucidates the influence of sedimentary environment on mudrock lithofacies and organic matter enrichment, providing a theoretical basis for optimizing shale oil reservoir selection and resource assessment, thereby promoting efficient exploration and low-carbon development of shale oil in lacustrine basins. Full article
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27 pages, 31928 KB  
Article
Migration Patterns and Sedimentary Evolution of Deepwater Channels in the Niger Delta Basin
by Fei Liu, Xiaoming Zhao, Jiawang Ge, Kun Qi, Massine Bouchakour and Shuchun Cao
J. Mar. Sci. Eng. 2025, 13(11), 2135; https://doi.org/10.3390/jmse13112135 - 12 Nov 2025
Viewed by 517
Abstract
The internal architecture of deep-water channels is highly complex. Previous research has primarily emphasized the sedimentary processes governing channel migration, yet the linkage between sediment-source mechanisms and migration patterns—particularly their vertical evolution—remains insufficiently understood. Drawing on 3D seismic data, well logs, and core [...] Read more.
The internal architecture of deep-water channels is highly complex. Previous research has primarily emphasized the sedimentary processes governing channel migration, yet the linkage between sediment-source mechanisms and migration patterns—particularly their vertical evolution—remains insufficiently understood. Drawing on 3D seismic data, well logs, and core analyses, this study delineates the channel architecture within the deep-water succession of the Niger Delta Basin. Furthermore, by correlating high-frequency sea-level fluctuations with the formation timing of structural units, we explore how sea-level changes influence the spatial distribution and evolutionary dynamics of submarine fan systems. This study investigated the bottom-up evolution of two channel-lobe systems—the East Channel System (ECS) and West Channel System (WCS) within the stratigraphic succession, identifying two principal channel migration styles: expansive migration and downstream migration. In the ECS, migration was primarily characterized by a combination of downstream and expansive patterns. In contrast, the WCS displayed intermittent downstream migration, accompanied by some irregular migration. Correlation of sea-level variation curves with corresponding core photographs indicates that the ECS developed during a fourth-order sea-level. Its lower lobe and upper channel intervals each correspond to two complete five-stage sea-level cycles. In this system, debris flows and high-density turbidity currents produced stronger lateral erosion and channel migration, giving rise to the expansive migration style. Conversely, the WCS formed during a four-stage sea-level rise, with its lobe and channel sections likewise corresponding to two complete five-stage sea-level cycles. Here, sedimentation dominated by high- and low-density turbidity currents promoted enhanced erosion and migration along the flow direction, resulting in the predominance of downstream migration patterns. The ECS and WCS together constitute a complete three-tiered stratigraphic sequence representing two lobe–channel systems. This configuration deviates to some extent from the conventional understanding of the spatial distribution of debris flows, lobate channels, main channels, and deep-sea mud deposits. Consequently, during intervals of frequent sea-level fluctuation, deep-water sedimentary components within the continental slope region can partially record the signals of fourth- and even fifth-order sea-level variations, facilitated by a stable tectonic framework and favorable sediment preservation conditions. These findings offer valuable insights for reconstructing regional sedimentary processes and interpreting sea-level evolution. Full article
(This article belongs to the Special Issue Advances in Sedimentology and Coastal and Marine Geology, 3rd Edition)
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26 pages, 10001 KB  
Article
Dolomite Reservoir Genesis Controlled by Sedimentary Cycles: Geochemical Evidence from the Middle Permian Qixia Formation, SE Sichuan Basin
by Rui Xu, Guangwei Wang, Fang Hao, Li Quan, Ling Zhou, Lingao Kong, Dinglin Peng and Modong Duan
Minerals 2025, 15(11), 1114; https://doi.org/10.3390/min15111114 - 27 Oct 2025
Viewed by 522
Abstract
Dolostone is an important reservoir for hydrocarbons, and significant hydrocarbons have been produced in the Middle Permian Qixia Formation dolostone reservoirs in the southeastern Sichuan Basin. The origin and formation process of the dolomite reservoir in the research area are studied through thin-section, [...] Read more.
Dolostone is an important reservoir for hydrocarbons, and significant hydrocarbons have been produced in the Middle Permian Qixia Formation dolostone reservoirs in the southeastern Sichuan Basin. The origin and formation process of the dolomite reservoir in the research area are studied through thin-section, geochemical, and sedimentary cycle analyses and U-Pb geochronology. Three types of dolomites were identified, including stratiform fine-crystalline dolomite (D1), patchy fine-crystalline dolomite (D2), and saddle dolomite cement (SD). D1 and D2 exhibit a range of δ13C values from 3.39‰ to 4.21‰ and a range of δ18O values from −6.06‰ to −5.75‰, indicating a mild depletion of δ18O relative to coeval seawater while maintaining seawater-equivalent δ13C signatures. Their 87Sr/86Sr ratios and REE patterns indicate seawater-derived fluids for D1 and D2 (both test results showed a U-Pb age of ≈274 Ma) and hydrothermal origin for SD. Sedimentary cycle analysis found that the regression process in the fourth-order sequence is conducive to the formation of dolomite under the background of regression in the third-order sequence. Exposure of bioclastic shoals enabled evaporated seawater reflux, forming penecontemporaneous D1 in fluid-saturated settings. Selective dolomitization occurred in the bioturbation structure with good porosity and permeability, forming D2. In the burial stage, the hydrothermal fluid had a slight transformation on the dolomite and formed SD. This model highlights transgressive–regressive cycle controls on reservoir development, providing exploration criteria for analogous carbonate systems. Full article
(This article belongs to the Special Issue Formation of Dolomite Reservoirs: Diagenetic and Tectonic Controls)
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29 pages, 11834 KB  
Article
Sedimentary Characteristics and Reservoir Quality of Shallow-Water Delta in Arid Lacustrine Basins: The Upper Jurassic Qigu Formation in the Yongjin Area, Junggar Basin, China
by Lin Wang, Qiqi Lyu, Yibo Chen, Xinshou Xu and Xinying Zhou
Appl. Sci. 2025, 15(15), 8458; https://doi.org/10.3390/app15158458 - 30 Jul 2025
Viewed by 827
Abstract
The lacustrine to deltaic depositional systems of the Upper Jurassic Qigu Formation in the Yongjin area constitute a significant petroleum reservoir in the central Junggar Basin, China. Based on core observations, petrology analyses, paleoenvironment indicators and modern sedimentary analyses, sequence stratigraphy, lithofacies associations, [...] Read more.
The lacustrine to deltaic depositional systems of the Upper Jurassic Qigu Formation in the Yongjin area constitute a significant petroleum reservoir in the central Junggar Basin, China. Based on core observations, petrology analyses, paleoenvironment indicators and modern sedimentary analyses, sequence stratigraphy, lithofacies associations, sedimentary environment, evolution, and models were investigated. The Qigu Formation can be divided into a third-order sequence consisting of a lowstand systems tract (LST) and a transgressive systems tract (TST), which is further subdivided into six fourth-order sequences. Thirteen lithofacies and five lithofacies associations were identified, corresponding to shallow-water delta-front deposits. The paleoenvironment of the Qigu Formation is generally characterized by an arid freshwater environment, with a dysoxic to oxic environment. During the LST depositional period (SQ1–SQ3), the water depth was relatively shallow with abundant sediment supply, resulting in a widespread distribution of channel and mouth bar deposits. During the TST depositional period (SQ4–SQ6), the rapid rise in base level, combined with reduced sediment supply, resulted in swift delta retrogradation and widespread lacustrine sedimentation. Combined with modern sedimentary analysis, the shallow-water delta in the study area primarily comprises a composite system of single main channels and distributary channel-mouth bar complexes. The channel-bar complex eventually forms radially distributed bar assemblages with lateral incision and stacking. The distributary channel could incise a mouth bar deeply or shallowly, typically forming architectural patterns of going over or in the mouth bar. Reservoir test data suggest that the mouth bar sandstones are favorable targets for lithological reservoir exploration in shallow-water deltas. Full article
(This article belongs to the Section Earth Sciences)
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23 pages, 4087 KB  
Article
An Optimization Framework for Allocating and Scheduling Multiple Tasks of Multiple Logistics Robots
by Byoungho Choi, Minkyu Kim and Heungseob Kim
Mathematics 2025, 13(11), 1770; https://doi.org/10.3390/math13111770 - 26 May 2025
Cited by 1 | Viewed by 2392
Abstract
This study addresses the multi-robot task allocation (MRTA) problem for logistics robots operating in zone-picking warehouse environments. With the rapid growth of e-commerce and the Fourth Industrial Revolution, logistics robots are increasingly deployed to manage high-volume order fulfillment. However, efficiently assigning tasks to [...] Read more.
This study addresses the multi-robot task allocation (MRTA) problem for logistics robots operating in zone-picking warehouse environments. With the rapid growth of e-commerce and the Fourth Industrial Revolution, logistics robots are increasingly deployed to manage high-volume order fulfillment. However, efficiently assigning tasks to multiple robots is a complex and computationally intensive problem. To address this, we propose a five-step optimization framework that reduces computation time while maintaining practical applicability. The first step calculates and stores distances and paths between product locations using the A* algorithm, enabling reuse in subsequent computations. The second step performs hierarchical clustering of orders based on spatial similarity and capacity constraints to reduce the problem size. In the third step, the traveling salesman problem (TSP) is formulated to determine the optimal execution sequence within each cluster. The fourth step uses a mixed integer linear programming (MILP) model to allocate clusters to robots while minimizing the overall makespan. Finally, the fifth step incorporates battery constraints by optimizing the task sequence and partial charging schedule for each robot. Numerical experiments were conducted using up to 1000 orders and 100 robots, and the results confirmed that the proposed method is scalable and effective for large-scale scenarios. Full article
(This article belongs to the Special Issue Mathematical Programming, Optimization and Operations Research)
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18 pages, 3809 KB  
Article
Electrochemical Impedance Spectroscopy Investigation on the Charge–Discharge Cycle Life Performance of Lithium-Ion Batteries
by Olivia Bruj and Adrian Calborean
Energies 2025, 18(6), 1324; https://doi.org/10.3390/en18061324 - 7 Mar 2025
Cited by 5 | Viewed by 2525
Abstract
In this work, we employed an electrochemical impedance spectroscopy analysis of commercial Li-ion Panasonic NCR18650B cells in order to monitor their cycle life performance and the influence of the C-rate on the charge/discharge processes. By applying a fast charge rate of 1.5 C, [...] Read more.
In this work, we employed an electrochemical impedance spectroscopy analysis of commercial Li-ion Panasonic NCR18650B cells in order to monitor their cycle life performance and the influence of the C-rate on the charge/discharge processes. By applying a fast charge rate of 1.5 C, we investigated their speed degradation within three distinct discharge rates, namely, 0.5 C, 1 C, and 1.5 C. In our first approach, we assessed the dynamics of the lithium-ion transport processes, as well as their dependence on discharge rates, with the aim of understanding how their performance correlates with usage conditions. We observed that, as the discharge current increases while the number of cycles decreases, the ohmic resistance in the aged state reduces. Moreover, the charge transfer resistance is not affected by the discharge current, as the values are inversely proportional to the current rate, but mostly by the number of cycles. By performing a state of health analysis of Li-ion batteries with different C-rates until they were completely discharged, we offer a clear indication of how much of the battery’s lifetime available energy was consumed and how much was left, anticipating further issues or when the battery needed replacing. Starting at 60% state of health, the battery degradation has a steeper increase at 0.5 C and 1 C, respectively, while for a deep 1.5 C discharge, it only increases when the battery charge rate can no longer be sustained. Finally, the resonance frequency results highlight a fast increase toward the end of life for 0.5 C and 1 C, which is directly correlated with the above results, as a potentiostatic electrochemical impedance spectroscopy sequence was applied every fourth charge/discharge cycle. When applied at 1.5 C, the linear trend is much more pronounced, similar to the state of health results. Full article
(This article belongs to the Special Issue Innovations and Challenges in New Battery Generations)
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16 pages, 298 KB  
Article
Reliability and Performance Optimization of Multi-Subsystem Systems Using Copula-Based Repair
by Elsayed E. Elshoubary, Taha Radwan and Rasha Abd El-Wahab Attwa
Axioms 2025, 14(3), 163; https://doi.org/10.3390/axioms14030163 - 24 Feb 2025
Cited by 1 | Viewed by 904
Abstract
This paper proposes a system made up of four subsystems connected in sequence. The first and third subsystems each have one unit, the second has two, and the fourth has three. Every subsystem operates in parallel and is governed by the K-Out-of-n:G rule. [...] Read more.
This paper proposes a system made up of four subsystems connected in sequence. The first and third subsystems each have one unit, the second has two, and the fourth has three. Every subsystem operates in parallel and is governed by the K-Out-of-n:G rule. Nonetheless, each subsystem needs at least one operational unit in order for the system to work. While a unit’s failure has an exponential distribution, repair is simulated using a general distribution and a distribution from the Gumbel–Hougaard family of copula. This study’s primary objective is to assess and contrast the system performance while our system is running under these two different repair policies. The problem is solved by combining the supplementary variable technique with Laplace transforms. We use reliability metrics to assess system performance. The second objective of this study is to present a reduction approach plan aimed at improving the overall reliability metrics of our system. Full article
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25 pages, 26870 KB  
Article
Astronomical Forcing of the Siliciclastic-Carbonate Mixed Sedimentation in the Late Pennsylvanian of the Tarim Basin, West China
by Rui Han, Shangfeng Zhang, Shunshe Luo, Yaning Wang, Gaoyang Gong, Jianhao Liang, Chengcheng Zhang, Cai Cheng and Liang Zhang
Minerals 2025, 15(2), 178; https://doi.org/10.3390/min15020178 - 14 Feb 2025
Cited by 1 | Viewed by 1368
Abstract
The Azigan Formation and the Lower Member of the Tahaqi Formation, dating to the Late Pennsylvanian, are pivotal exploration targets within the Tarim Basin. This region exhibits extensive siliciclastic-carbonate mixed sediments. However, the lack of high-resolution sequence stratigraphic frameworks significantly limits advanced petroleum [...] Read more.
The Azigan Formation and the Lower Member of the Tahaqi Formation, dating to the Late Pennsylvanian, are pivotal exploration targets within the Tarim Basin. This region exhibits extensive siliciclastic-carbonate mixed sediments. However, the lack of high-resolution sequence stratigraphic frameworks significantly limits advanced petroleum geological research. Using principles of sequence stratigraphy and cyclostratigraphy and leveraging outcrop and thin section data alongside GR series analysis, this study systematically investigates the lithological, cyclic, and sequence stratigraphic characteristics of these formations. A total of 12 different lithofacies were identified, and 3 third-order sequences, 15 fourth-order sequences, and 16 long eccentricity cycles were delineated. A 1.2 Ma long slope signal was also identified. An astronomical timescale was established with 298.9 Ma as the anchor, defining the boundary between the upper and lower members of the Tahaqi Formation, revealing a link between long eccentricity cycles and the formation of fourth-order sequences. Moreover, the relationship between the 1.2 Ma long obliquity cycle and third-order sequences, as well as its role in driving sea-level changes in southwestern Tarim, is explored. The interplay between long obliquity and eccentricity cycles influenced the region’s mixed siliceous clastic and carbonate deposition. Warm and humid climatic conditions coupled with sea-level rise enhanced the input and transport of clastic materials, facilitating large-scale mixed sedimentation. Full article
(This article belongs to the Section Mineral Exploration Methods and Applications)
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20 pages, 11683 KB  
Article
The Lower Pleistocene Tephra Layers in the Crotone Marine Sequence of Southern Italy: Tracing Their Volcanic Source Area
by Paola Donato, Chiara Benedetta Cannata, Antonio Giulio Cosentino, Mariano Davoli, Rosanna De Rosa and Francesca Forni
Minerals 2025, 15(2), 156; https://doi.org/10.3390/min15020156 - 7 Feb 2025
Viewed by 1242
Abstract
At least three tephra layers, with ages around 2 Ma, crop out in the Pleistocene marine sequence of the Crotone basin, in southern Italy. We present the petrography and the mineral and glass chemistry of these layers, in order to correlate them with [...] Read more.
At least three tephra layers, with ages around 2 Ma, crop out in the Pleistocene marine sequence of the Crotone basin, in southern Italy. We present the petrography and the mineral and glass chemistry of these layers, in order to correlate them with other Pleistocene sequences and, possibly, to identify the volcanic source(s). The oldest layer (a1) contains glass shards with homogeneous rhyolitic composition, together with crystals of ortho- and clinopyroxene, plagioclase and amphibole. The age, petrography and major elements’ glass composition allow for correlation with coeval tephra layers cropping out in the southern Apennines, near the town of Craco, in Valle Ricca, near Rome, and in the Periadriatic basin, in central Italy. Two other younger tephras (a3 and a4) can be distinguished by the absence of hydrous phases in a3 and the occurrence of biotite in a4. They show a higher variability in glass composition, which may be related to multiple volcanic sources. A fourth tephra of unknown position, but probably intermediate between a1 and a3, was also recognized. The volcanic source of the tephra layers was identified in a submerged paleo-arc in the central Tyrrhenian Sea, possibly corresponding to the Ventotene ridge. The paper also provides a dataset of glass trace elements’ composition for future correlations. Full article
(This article belongs to the Special Issue Volcaniclastic Sedimentation in Deep-Water Basins)
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26 pages, 2855 KB  
Article
Photokinetics of Photothermal Reactions
by Mounir Maafi
Molecules 2025, 30(2), 330; https://doi.org/10.3390/molecules30020330 - 15 Jan 2025
Cited by 2 | Viewed by 1337
Abstract
Photothermal reactions, involving both photochemical and thermal reaction steps, are the most abundant sequences in photochemistry. The derivation of their rate laws is standardized, but the integration of these rate laws has not yet been achieved. Indeed, the field still lacks integrated rate [...] Read more.
Photothermal reactions, involving both photochemical and thermal reaction steps, are the most abundant sequences in photochemistry. The derivation of their rate laws is standardized, but the integration of these rate laws has not yet been achieved. Indeed, the field still lacks integrated rate laws for the description of these reactions’ behavior and/or identification of their reaction order. This made difficult a comprehensive account of the photokinetics of photothermal reactions, which created a gap in knowledge. This gap is addressed in the present paper by introducing an unprecedented general model equation capable of mapping out the kinetic traces of such reactions when exposed to light or in the dark. The integrated rate law model equation also applies when the reactive medium is exposed to either monochromatic or polychromatic light irradiation. The validity of the model equation was established against simulated data obtained by a fourth-order Runge–Kutta method. It was then used to describe and quantify several situations of photothermal reactions, such as the effects of initial concentration, spectator molecules, and incident radiation intensity, and the impact of the latter on the photonic yield. The model equation facilitated a general elucidation method to determine the intrinsic reaction parameters (quantum yields and absorptivities of the reactive species) for any photothermal mechanism whose number of species is known. This paper contributes to rationalizing photokinetics along the same general guidelines adopted in chemical kinetics. Full article
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14 pages, 232 KB  
Article
On Certain Fourth-Order Linear Recursive Sequences
by Gül Karadeniz-Gözeri, Selin Sarı and Pınar Akgül
Symmetry 2025, 17(1), 41; https://doi.org/10.3390/sym17010041 - 28 Dec 2024
Cited by 1 | Viewed by 1157
Abstract
In this paper, we introduce a fourth-order linear recursive sequence that is related to the concept of subbalancing numbers. This sequence is constructed by using the third balancing number in the Diophantine equation of subbalancing numbers and is called the sequence of [...] Read more.
In this paper, we introduce a fourth-order linear recursive sequence that is related to the concept of subbalancing numbers. This sequence is constructed by using the third balancing number in the Diophantine equation of subbalancing numbers and is called the sequence of B3-Lucas subbalancing numbers. Motivated by the results for b3-Lucas subbalancing numbers, we obtain several algebraic identities regarding B3-Lucas subbalancing numbers. Furthermore, we derive some algebraic relations between B3-Lucas subbalancing numbers and some other integer sequences. Full article
16 pages, 10177 KB  
Article
A Secure and Efficient White-Box Implementation of SM4
by Xiaobo Hu, Yanyan Yu, Yinzi Tu, Jing Wang, Shi Chen, Yuqi Bao, Tengyuan Zhang, Yaowen Xing and Shihui Zheng
Entropy 2025, 27(1), 1; https://doi.org/10.3390/e27010001 - 24 Dec 2024
Cited by 2 | Viewed by 1608
Abstract
Differential Computation Analysis (DCA) leverages memory traces to extract secret keys, bypassing countermeasures employed in white-box designs, such as encodings. Although researchers have made great efforts to enhance security against DCA, most solutions considerably decrease algorithmic efficiency. In our approach, the Feistel cipher [...] Read more.
Differential Computation Analysis (DCA) leverages memory traces to extract secret keys, bypassing countermeasures employed in white-box designs, such as encodings. Although researchers have made great efforts to enhance security against DCA, most solutions considerably decrease algorithmic efficiency. In our approach, the Feistel cipher SM4 is implemented by a series of table-lookup operations, and the input and output of each table are protected by affine transformations and nonlinear encodings generated randomly. We employ fourth-order non-linear encoding to reduce the loss of efficiency while utilizing a random sequence to shuffle lookup table access, thereby severing the potential link between memory data and the intermediate values of SM4. Experimental results indicate that the DCA procedure fails to retrieve the correct key. Furthermore, theoretical analysis shows that the techniques employed in our scheme effectively prevent existing algebraic attacks. Finally, our design requires only 1.44 MB of memory, significantly less than that of the known DCA-resistant schemes—Zhang et al.’s scheme (24.3 MB), Yuan et al.’s scheme (34.5 MB) and Zhao et al.’s scheme (7.8 MB). Thus, our SM4 white-box design effectively ensures security while maintaining a low memory cost. Full article
(This article belongs to the Special Issue Information-Theoretic Cryptography and Security)
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14 pages, 1342 KB  
Article
Diffusion-Weighted MRI and Human Papillomavirus (HPV) Status in Oropharyngeal Cancer
by Heleen Bollen, Rüveyda Dok, Frederik De Keyzer, Sarah Deschuymer, Annouschka Laenen, Johannes Devos, Vincent Vandecaveye and Sandra Nuyts
Cancers 2024, 16(24), 4284; https://doi.org/10.3390/cancers16244284 - 23 Dec 2024
Cited by 3 | Viewed by 1599
Abstract
Background: This study aimed to explore the differences in quantitative diffusion-weighted (DW) MRI parameters in oropharyngeal squamous cell carcinoma (OPC) based on Human Papillomavirus (HPV) status before and during radiotherapy (RT). Methods: Echo planar DW sequences acquired before and during (chemo)radiotherapy (CRT) of [...] Read more.
Background: This study aimed to explore the differences in quantitative diffusion-weighted (DW) MRI parameters in oropharyngeal squamous cell carcinoma (OPC) based on Human Papillomavirus (HPV) status before and during radiotherapy (RT). Methods: Echo planar DW sequences acquired before and during (chemo)radiotherapy (CRT) of 178 patients with histologically proven OPC were prospectively analyzed. The volumetric region of interest (ROI) was manually drawn on the apparent diffusion coefficient (ADC) map, and 105 DW-MRI radiomic parameters were extracted. Change in ADC values (Δ ADC) was calculated as the difference between baseline and during RT at week 4, normalized by the baseline values. Results: Pre-treatment first-order 10th percentile ADC and Gray Level co-occurrence matrix (GLCM)-correlation were significantly lower in HPV-positive compared with HPV-negative tumors (82.4 × 10−5 mm2/s vs. 90.3 × 10−5 mm2/s, p = 0.03 and 0.18 vs. 0.30, p < 0.01). In the fourth week of RT, all first-order ADC values were significantly higher in HPV-positive tumors (p < 0.01). Δ ADC mean was significantly higher for the HPV-positive compared with the HPV-negative OPC group (95% vs. 55%, p < 0.01). A predictive model for HPV status based on smoking status, alcohol consumption, GLCM correlation, and mean ADC and 10th percentile ADC values yielded an area under the curve of 0.77 (95% CI 0.70–0.84). Conclusions: Our results highlight the potential of DW-MR imaging as a non-invasive biomarker for the prediction of HPV status, although its current role remains supplementary to pathological confirmation. Full article
(This article belongs to the Special Issue Advances in Radiotherapy for Head and Neck Cancer)
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19 pages, 4292 KB  
Article
Bioinformatic Analysis of Topoisomerase IIα Reveals Interdomain Interdependencies and Critical C-Terminal Domain Residues
by Clark E. Endsley, Kori A. Moore, Thomas D. Townsley, Kirk K. Durston and Joseph E. Deweese
Int. J. Mol. Sci. 2024, 25(11), 5674; https://doi.org/10.3390/ijms25115674 - 23 May 2024
Cited by 3 | Viewed by 2902
Abstract
DNA Topoisomerase IIα (Top2A) is a nuclear enzyme that is a cancer drug target, and there is interest in identifying novel sites on the enzyme to inhibit cancer cells more selectively and to reduce off-target toxicity. The C-terminal domain (CTD) is one potential [...] Read more.
DNA Topoisomerase IIα (Top2A) is a nuclear enzyme that is a cancer drug target, and there is interest in identifying novel sites on the enzyme to inhibit cancer cells more selectively and to reduce off-target toxicity. The C-terminal domain (CTD) is one potential target, but it is an intrinsically disordered domain, which prevents structural analysis. Therefore, we set out to analyze the sequence of Top2A from 105 species using bioinformatic analysis, including the PSICalc algorithm, Shannon entropy analysis, and other approaches. Our results demonstrate that large (10th-order) interdependent clusters are found including non-proximal positions across the major domains of Top2A. Further, CTD-specific clusters of the third, fourth, and fifth order, including positions that had been previously analyzed via mutation and biochemical assays, were identified. Some of these clusters coincided with positions that, when mutated, either increased or decreased relaxation activity. Finally, sites of low Shannon entropy (i.e., low variation in amino acids at a given site) were identified and mapped as key positions in the CTD. Included in the low-entropy sites are phosphorylation sites and charged positions. Together, these results help to build a clearer picture of the critical positions in the CTD and provide potential sites/regions for further analysis. Full article
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