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12 pages, 245 KiB  
Article
Risk Factors Associated with the Seroprevalence of Leptospirosis in Small Ruminants from a Semi-Arid Region of Mexico
by Jesús Francisco Chávez-Sánchez, Lucio Galaviz-Silva, Zinnia Judith Molina-Garza, Pablo Zapata-Benavides, Sibilina Cedillo-Rosales, Joel Horacio Elizondo-Luévano, Miroslava Kačániová and Ramiro Ávalos-Ramírez
Pathogens 2025, 14(4), 344; https://doi.org/10.3390/pathogens14040344 - 3 Apr 2025
Viewed by 606
Abstract
Leptospirosis is one of the world’s major neglected tropical zoonotic diseases (NTZDs), implicated in animal health and welfare with economic consequences for livestock production. This study aims to estimate the seroprevalence of Leptospira spp. and identify potential risk factors in small ruminant herds. [...] Read more.
Leptospirosis is one of the world’s major neglected tropical zoonotic diseases (NTZDs), implicated in animal health and welfare with economic consequences for livestock production. This study aims to estimate the seroprevalence of Leptospira spp. and identify potential risk factors in small ruminant herds. This epidemiological cross-sectional study was conducted in Nuevo León, a semi-arid region of Mexico. A total of 389 blood samples from goats and 385 from sheep older than eight months were randomly collected from 128 herds. Anti-Leptospira antibodies were detected using the microscopic agglutination test (MAT), and univariate and multivariate logistic regression analyses were performed to determine their association with leptospirosis infection. The overall prevalence was 13.5% (105/774), with 14.4% (56/389) in goats and 12.7% (49/385) in sheep. Sejroe was the most predominant serogroup. The main risk factors in sheep were contact with domestic cattle, ≥100 animals per herd, congenital abnormalities, contact with feral pigs, meat production system, absence of veterinary care, and abortions with odds ratios (OR) between 1.7 and 4.1. In goats, the main risk factors included lack of quarantine measures, contact with feral pigs, absence of veterinary care, and abortions where the OR ranged from 1.7 to 3.3. These findings indicate that Leptospira spp. is present in small ruminant herds. This is the first study aimed at understanding leptospirosis epidemiology in the northeastern region of Mexico, as goats and sheep may act as potential reservoirs. Continuous monitoring of Leptospira infections is imperative, as well as developing educational initiatives for farmers to implement biosecurity and prevention measures to prevent infections within herds and protect public health. Full article
(This article belongs to the Section Bacterial Pathogens)
7 pages, 1277 KiB  
Article
Ecological Factors Associated with Burrow System Occupancy by Great Desert Skinks (Liopholis kintorei)
by Maria A. Eifler and Douglas A. Eifler
Diversity 2025, 17(2), 134; https://doi.org/10.3390/d17020134 - 15 Feb 2025
Viewed by 588
Abstract
The great desert skink (Liopholis kintorei, locally known as tjakuṟa) occupies burrow systems in arid regions of central Australia. Most burrow systems remain occupied for an average of 4, and up to 10, years by the same related individuals. The circumstances [...] Read more.
The great desert skink (Liopholis kintorei, locally known as tjakuṟa) occupies burrow systems in arid regions of central Australia. Most burrow systems remain occupied for an average of 4, and up to 10, years by the same related individuals. The circumstances associated with changes in occupancy are under active investigation. Factors linked to tjakuṟa abandoning burrow systems include intense fires and predation by feral cats (Felis catus). We examined ecological factors associated with whether burrow systems that were occupied in the previous year were currently occupied by tjakuṟa. We determined occupancy of previously occupied tjakuṟa burrow systems by the presence of fresh scats in their latrines. We also assessed the size, vegetation cover, and proximity of termite calics to burrow systems. Neither overall vegetation cover nor spinifex cover was related to burrow system occupancy, but larger burrow systems were more likely to remain occupied. Burrow systems within 10 m of termite structures were more—and those within 2.5 m of Grevillea were less—likely to remain occupied by tjakuṟa. The role of woody vegetation (Grevillea) and termite presence on risk of predation, the behavior of tjakuṟa, and burrow system occupancy merits further investigation on a longer timescale. Full article
(This article belongs to the Special Issue Biogeography, Ecology and Conservation of Reptiles)
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6 pages, 231 KiB  
Case Report
The First-Ever Encounter with Salmonella enterica Serovar Hvittingfoss Causing Acute Gastroenteritis in India: A Case Report
by Mahadevaiah Neelambike Sumana, Morubagal Raghavendra Rao, Deepashree Rajshekar, Krishna Karthik, Nikita K Shah, Veerabhadra Swamy, Chinchana Shylaja Eshwar and Yogeesh D Maheshwarappa
Infect. Dis. Rep. 2024, 16(6), 1191-1196; https://doi.org/10.3390/idr16060094 - 2 Dec 2024
Cited by 1 | Viewed by 1338
Abstract
Background: Salmonella enterica serovar Hvittingfoss, a member of the non-typhoidal Salmonella group, is an important foodborne serovar most frequently identified in regions (Australia, Belgium, and the United States) with active surveillance systems. This serovar has been implicated in outbreaks of foodborne illness. [...] Read more.
Background: Salmonella enterica serovar Hvittingfoss, a member of the non-typhoidal Salmonella group, is an important foodborne serovar most frequently identified in regions (Australia, Belgium, and the United States) with active surveillance systems. This serovar has been implicated in outbreaks of foodborne illness. Soft cheese, crab cocktail, beef, and rock melon are commonly involved in these outbreaks. Although the definitive host of this serovar is not yet established, Salmonella Hvittingfoss can be found in wild animals (Feral pigs), bird populations (Bar-tailed godwit, Plumed whistling ducks, White-naped crane, and Sharp-tailed sandpiper), and domestic birds like chickens. Case presentation: We report the first case of Salmonella enterica serovar Hvittingfoss causing acute gastroenteritis in a 52-year-old male labourer and agriculturist from a rural area of Mysuru, South India. This is the first documented case of Salmonella Hvittingfoss causing acute gastroenteritis in India. Conclusions: While non-typhoidal Salmonella infections typically resolve on their own, they can be particularly dangerous for certain demographics, such as children, the elderly, and those with compromised immune systems. Therefore, studying the different serotypes of these infections in both clinical and subclinical cases is crucial for targeting effective surveillance, hygiene practises, and food safety measures that can mitigate their impact on public health. Full article
(This article belongs to the Special Issue Emerging Infections: Epidemiology, Diagnostics, Clinics and Evolution)
12 pages, 1310 KiB  
Article
Effect of High Temperature Exposure and Laboratory Processing Techniques on the Diagnostic Performance of Dry Swabs for the Detection of African Swine Fever Virus
by Leonard Izzard, David T. Williams and Peter A. Durr
Viruses 2024, 16(12), 1812; https://doi.org/10.3390/v16121812 - 21 Nov 2024
Viewed by 1102
Abstract
One of the key surveillance strategies for the early detection of an African swine fever (ASF) incursion into a country is the sampling of wild or feral pig populations. In Australia, the remote northern regions are considered a risk pathway for ASF incursion [...] Read more.
One of the key surveillance strategies for the early detection of an African swine fever (ASF) incursion into a country is the sampling of wild or feral pig populations. In Australia, the remote northern regions are considered a risk pathway for ASF incursion due to the combination of high numbers of feral pigs and their close proximity to countries where ASF is present. These regions primarily consist of isolated arid rangelands with high average environmental temperatures. A specific objective of this study was to assess whether the exposure of swabs to the high temperatures that may be encountered in outback Australia, over an extended period, would reduce the diagnostic sensitivity (DSe) of real-time PCR (qPCR) to detect ASF virus (ASFV). We found that the extended heat exposure (up to 45 °C) of FLOQSwabs or GenoTube swabs, either prior to blood sampling or post sampling, showed no reduction in the DSe of the ASFV qPCR compared to swabs stored at room temperature (~21 °C). We also assessed an improved DNA extraction method for samples collected using GenoTube swabs to obtain DSe results comparable to FLOQSwabs. Taken together, these experiments demonstrate that dry swabs can provide the basis for an effective low-cost surveillance system for ASF in situations where extended exposure to high environmental temperatures is unavoidable. Full article
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21 pages, 8518 KiB  
Article
The Foot Musculature of the Rhesus Monkey (Macaca mulatta): An Anatomical Study
by Christophe Casteleyn, Max Bosmans, Sofie Muylle and Jaco Bakker
Anatomia 2024, 3(4), 256-276; https://doi.org/10.3390/anatomia3040022 - 20 Nov 2024
Viewed by 1751
Abstract
The rhesus monkey (Macaca mulatta) is a non-human primate with a genome that is 93.5% identical to that of humans. Both species, therefore, have numerous phenotypical similarities in common. Consequently, this non-human primate is regularly studied in biomedical research. Not only [...] Read more.
The rhesus monkey (Macaca mulatta) is a non-human primate with a genome that is 93.5% identical to that of humans. Both species, therefore, have numerous phenotypical similarities in common. Consequently, this non-human primate is regularly studied in biomedical research. Not only does the rhesus monkey play an important role as an animal model for studying human disease, but it is also often featured in zoos, and there are substantial feral populations that live in Asia. Since they are exploited as research subjects, their appropriate housing and husbandry and the validation of obtained research data benefit from the comprehension of the rhesus monkey anatomy. Unexpectedly, the number of anatomical documents on the rhesus monkey are largely outnumbered by publications on the anatomy of domestic animals. In addition, the limited number of available anatomical books and atlases are, unfortunately, outdated, e.g., by presenting black-and-white photographs and using archaic nomenclature, or failing to cover the in-depth anatomy of various anatomical systems. Since state-of-the-art data on the rhesus monkey anatomy are requested by biomedical researchers and veterinarians responsible for the daily care of these captive animals, the present study describes the musculature of the foot of the rhesus monkey. It builds on a recently published manuscript on the topographical anatomy of the pelvic limb of this non-human primate. Full-color anatomical (stereomicroscopic) photographs are taken during layer-by-layer dissections of the feet of three rhesus monkeys. All the muscles, from the superficial to the deepest layer, are described using veterinary anatomical nomenclature and annotated on multipaneled figures. Although the foot musculature of the rhesus monkey largely parallels that of its human counterparts, the small number of dissimilarities should be recognized when extrapolating these research data. In addition, a solid understanding of the rhesus monkey anatomy by veterinarians can be valuable during medical interventions, such as surgery for foot injuries. Full article
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14 pages, 26893 KiB  
Communication
Home Range and Habitat Selection of Feral Horses (Equus ferus f. caballus) in a Mountainous Environment: A Case Study from Northern Greece
by Dimitrios E. Bakaloudis, Charalambos T. Thoma, Konstantina N. Makridou, Evangelos G. Kotsonas, Georgios Arsenos, Alexandros Theodoridis and Vasileios Kontsiotis
Land 2024, 13(8), 1165; https://doi.org/10.3390/land13081165 - 29 Jul 2024
Cited by 1 | Viewed by 2107
Abstract
The spatial ecology of feral horses (Equus ferus f. caballus) in Greece has never been studied before, including home range size and habitat selection. We tracked two mares fitted with global positioning system collars between September 2020 and August 2021 in [...] Read more.
The spatial ecology of feral horses (Equus ferus f. caballus) in Greece has never been studied before, including home range size and habitat selection. We tracked two mares fitted with global positioning system collars between September 2020 and August 2021 in a portion of Mount Menoikio in Central Macedonia, Northern Greece. We used K-select analysis to assess habitat selection for the study period by combining location data with several environmental variables. The mean home ranges for horses varied from 26.72 km2 (95% Minimum Convex Polygon; SE = 0.442) to 27.84 km2 (95% Kernel Density; SE = 1.83). Both horses selected areas with flat and smooth topography near natural grasslands with high green productivity. Conversely, they avoided areas near broadleaved forests and pastures, as well as at north-facing aspects. Overall, suitable habitats corresponded to a small portion (15.1%) of the available habitat. Our findings could assist land managers in mapping primary horses’ habitat in the wider region and implement management regimes that will aid in preserving natural grasslands. Full article
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16 pages, 2376 KiB  
Article
The Impacts of Burn Severity and Frequency on Erosion in Western Arnhem Land, Australia
by David Bretreger, Gregory R. Hancock, John Lowry, Indishe P. Senanayake and In-Young Yeo
Sensors 2024, 24(7), 2282; https://doi.org/10.3390/s24072282 - 3 Apr 2024
Cited by 4 | Viewed by 2218
Abstract
Wildfires are pivotal to the functioning of many ecosystems globally, including the magnitude of surface erosion rates. This study aims to investigate the relationships between surface erosion rates and wildfire intensity in the tropical north savanna of Australia. The occurrence of fires in [...] Read more.
Wildfires are pivotal to the functioning of many ecosystems globally, including the magnitude of surface erosion rates. This study aims to investigate the relationships between surface erosion rates and wildfire intensity in the tropical north savanna of Australia. The occurrence of fires in western Arnhem Land, Northern Territory, Australia was determined with remotely sensed digital datasets as well as analogue erosion measurement methods. Analysis was performed using satellite imagery to quantify burn severity via a monthly delta normalised burn ratio (dNBR). This was compared and correlated against on-ground erosion measurements (erosion pins) for 13 years. The dNBR for each year (up to +0.4) displayed no relationship with subsequent erosion (up to ±4 mm of erosion/deposition per year). Poor correlation was attributed to low fire severity, patchy burning, significant time between fires and erosion-inducing rainfall. Other influences included surface roughness from disturbances from feral pigs and cyclone impacts. The findings here oppose many other studies that have found that fires increase surface erosion. This accentuates the unique ecosystem characteristics and fire regime properties found in the tropical Northern Territory. Scenarios of late dry season fires with high severity were not observed in this study and require more investigations. Ecosystems such as the one examined here require specialised management practices acknowledging the specific ecosystem functions and processes. The methods employed here combine both analogue and digital sensors to improve understandings of a unique environmental system. Full article
(This article belongs to the Section Environmental Sensing)
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28 pages, 2379 KiB  
Article
Fungal Endophytes: Discovering What Lies within Some of Canada’s Oldest and Most Resilient Grapevines
by Shawkat Ali, A. Harrison Wright, Joey B. Tanney, Justin B. Renaud and Mark W. Sumarah
J. Fungi 2024, 10(2), 105; https://doi.org/10.3390/jof10020105 - 26 Jan 2024
Viewed by 2661
Abstract
Plant diseases and pests reduce crop yields, accounting for global crop losses of 30% to 50%. In conventional agricultural production systems, these losses are typically controlled by applying chemical pesticides. However, public pressure is mounting to curtail agrochemical use. In this context, employing [...] Read more.
Plant diseases and pests reduce crop yields, accounting for global crop losses of 30% to 50%. In conventional agricultural production systems, these losses are typically controlled by applying chemical pesticides. However, public pressure is mounting to curtail agrochemical use. In this context, employing beneficial endophytic microorganisms is an increasingly attractive alternative to the use of conventional chemical pesticides in agriculture. A multitude of fungal endophytes are naturally present in plants, producing enzymes, small peptides, and secondary metabolites due to their bioactivity, which can protect hosts from pathogens, pests, and abiotic stresses. The use of beneficial endophytic microorganisms in agriculture is an increasingly attractive alternative to conventional pesticides. The aim of this study was to characterize fungal endophytes isolated from apparently healthy, feral wine grapes in eastern Canada that have grown without agrochemical inputs for decades. Host plants ranged from unknown seedlings to long-lost cultivars not widely propagated since the 1800s. HPLC-MS was used to identify unique endophyte-derived chemical compounds in the host plants, while dual-culture competition assays showed a range in endophytes’ ability to suppress the mycelial growth of Botrytis, which is typically controlled in viticulture with pesticides. Twelve of the most promising fungal endophytes isolated were identified using multilocus sequencing and morphology, while DNA barcoding was employed to identify some of their host vines. These fungal endophyte isolates, which consisted of both known and putative novel strains, belonged to seven genera in six families and five orders of Ascomycota. Exploring the fungal endophytes in these specimens may yield clues to the vines’ survival and lead to the discovery of novel biocontrol agents. Full article
(This article belongs to the Special Issue Fungal Endophytes in Agriculture)
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22 pages, 5463 KiB  
Systematic Review
Equine Social Behaviour: Love, War and Tolerance
by Laura Torres Borda, Ulrike Auer and Florien Jenner
Animals 2023, 13(9), 1473; https://doi.org/10.3390/ani13091473 - 26 Apr 2023
Cited by 10 | Viewed by 6348
Abstract
Sociality is an ethological need of horses that remained unchanged by domestication. Accordingly, it is essential to include horses’ social behavioural requirements and the opportunity to establish stable affiliative bonds in equine management systems and welfare assessment. Thus, this systematic review aims to [...] Read more.
Sociality is an ethological need of horses that remained unchanged by domestication. Accordingly, it is essential to include horses’ social behavioural requirements and the opportunity to establish stable affiliative bonds in equine management systems and welfare assessment. Thus, this systematic review aims to provide an up-to-date analysis of equine intraspecific social ethograms. A literature review yielded 27 papers that met the inclusion criteria by studying adult (≥2 years) equine social behaviour with conspecifics using a well-defined ethogram. Social interactions were observed in 851 horses: 320 (semi-)feral free-ranging, 62 enclosed (semi-)feral and 469 domesticated, living in groups averaging 9.1 (mean +/− 6.8 s.d., range: 2–33) horses. The ethograms detailed in these 27 studies included a total of 40 (mean: 12.8/paper, range: 2–23) social behaviours, of which 60% (24/40) were agonistic, 30% (12/40) affiliative, 7.5% (3/40) investigative and 2.5% (1/40) neutral. The 27 publications included 67.7% agonistic and only 26% affiliative, 5.1% investigative and 1.2% neutral social behaviours in their methodology, thus focusing predominantly on socio-negative interactions. The strong emphasis on agonistic behaviours in equine ethology starkly contrasts with the rare occurrence of agonistic behaviours in stable horse groups and the well-established importance of affiliative interactions for equine welfare. The nuanced and complex equine social behaviour requires refinement of the ethogram with a greater focus on affiliative, ambivalent and indifferent interactions and the role of social tolerance in equine social networks to advance equine welfare assessment. Full article
(This article belongs to the Section Equids)
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15 pages, 3194 KiB  
Article
Game Birds Can Act as Intermediaries of Virulent Genotype VII Avian Orthoavulavirus-1 between Wild Birds and Domestic Poultry
by Craig S. Ross, Paul Skinner, David Sutton, Jo Mayers, Alex Nunez, Sharon M. Brookes, Ashley C. Banyard and Ian H. Brown
Viruses 2023, 15(2), 536; https://doi.org/10.3390/v15020536 - 14 Feb 2023
Cited by 3 | Viewed by 2340
Abstract
Newcastle Disease (ND), caused by virulent forms of Avian orthoavulavirus serotype-1 (AOAV-1) is an economically important avian disease worldwide. The past two incursions of ND into the United Kingdom occurred in game bird populations during 2005 and 2006. The nature of the game [...] Read more.
Newcastle Disease (ND), caused by virulent forms of Avian orthoavulavirus serotype-1 (AOAV-1) is an economically important avian disease worldwide. The past two incursions of ND into the United Kingdom occurred in game bird populations during 2005 and 2006. The nature of the game bird semi-feral rearing system, which can bring these birds into close contact with both wild birds and commercial or backyard poultry, has been hypothesized to act as a bridge between these two environments. As such, the risk that AOAV-1-infected game birds may pose to the UK poultry industry was investigated. Pheasants, partridges and chickens were experimentally infected with the virulent strain APMV-1/Chicken/Bulgaria/112/13, a genotype VII.2 virus associated with ND outbreaks in Eastern Europe. The study demonstrated that both chickens and pheasants are susceptible to infection with APMV-1/Chicken/Bulgaria/112/13, which results in high mortality and onward transmission. Partridges by contrast are susceptible to infection, but mortality was reduced, as was onward transmission. However, the data indicated that both pheasants and partridges may serve as intermediate hosts of AOAV-1 and may bridge the wild bird–domestic poultry interface enabling transmission into an economically damaging environment where morbidity and mortality may be high. Full article
(This article belongs to the Special Issue Avian Respiratory Viruses, Volume III)
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5 pages, 1619 KiB  
Proceeding Paper
A Study about the Piggery Sector Sustainability, Pig Breed Diversity and Its Ecological Implications in Urban Districts of Uttarakhand
by Khusbu Sahu
Biol. Life Sci. Forum 2022, 15(1), 19; https://doi.org/10.3390/IECD2022-12410 - 15 Mar 2022
Viewed by 1481
Abstract
Uttarakhand is situated on the southern slope of the world’s youngest (geo-dynamically sensitive) mountain system, “the Himalayas”. Owing to rapid deforestation in the planar districts due to an increase in infrastructural growth, the wildlife–livestock–human interface has blurred. This has increased the chances of [...] Read more.
Uttarakhand is situated on the southern slope of the world’s youngest (geo-dynamically sensitive) mountain system, “the Himalayas”. Owing to rapid deforestation in the planar districts due to an increase in infrastructural growth, the wildlife–livestock–human interface has blurred. This has increased the chances of contact exposure of wild boars to humans and domestic animals. The study identifies the location of pig rearers and their pig rearing practices, with its ecological effects, and also studies the mitochondrial DNA diversity using a control region from the 68 samples collected from the surveyed household. Analysis showed that 60.7%, 10.7% and 21.4% of the households raised pig near seasonal streams (slum settlements), the residential areas and near the forest, respectively. Furthermore, 28.6% maintained breeding boar of feral origin and 96.94% followed semi-intensive pig rearing practices; hence human settlements have stayed in close association with pigs (domestic and wild) and other domestic animals. The possibility of the emergence of zoonotic and non-zoonotic disease and its easy transmission to humans has become more prominent in the urban setting. A total of 18 haplotypes were observed with 34 segregating sites in 68 analyzed sequences. The high level of haplotype diversity and nucleotide diversity suggested an increase in crossbreeding among the species. Full article
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16 pages, 3283 KiB  
Article
Toxoplasmosis in Zoo Animals: A Retrospective Pathology Review of 126 Cases
by Daniela Denk, Simon De Neck, Shannon Khaliq and Mark F. Stidworthy
Animals 2022, 12(5), 619; https://doi.org/10.3390/ani12050619 - 1 Mar 2022
Cited by 18 | Viewed by 6402
Abstract
Toxoplasma gondii is an extremely successful zoonotic protozoan parasite that has been demonstrated in a wide range of endo- and poikilothermic species. Although infection is widespread amongst domestic animals, overt disease other than abortion in small ruminants is sporadic. This survey evaluates toxoplasmosis [...] Read more.
Toxoplasma gondii is an extremely successful zoonotic protozoan parasite that has been demonstrated in a wide range of endo- and poikilothermic species. Although infection is widespread amongst domestic animals, overt disease other than abortion in small ruminants is sporadic. This survey evaluates toxoplasmosis in zoo animals based on a systematic review of pathology archive material (n = 33,506 submissions) over a 16-year study period. A total of 126 submissions, deriving from 32 zoos, two educational facilities and two private owners, were included in the study, based on gross lesions, cytological, histological and immunohistological diagnosis of toxoplasmosis. Clinical history, signalment, annual distribution and post-mortem findings were evaluated. A total of 31 species (mammalian 97%/avian 3%) were represented in the study material. Ring-tailed lemurs, slender tailed meerkats, Pallas’ cats, and squirrel monkeys were most affected. An unusual outbreak occurred in Asian small-clawed otters, in which toxoplasmosis has not been reported to date. Clinically, animals over 12 months of age presented with non-specific symptoms (anorexia, weight loss, lethargy, debilitation), neurological, gastrointestinal or respiratory signs and sudden death. Systemic disease predominated, with a propensity for encephalitis in meerkats and Pallas’ cats and systemic disease involving lymphoid tissues in ring-tailed lemurs. Cases in the UK occurred year-round, with species-specific peaks and increases between August and November. This study reinforces the importance of toxoplasmosis as a significant cause of sporadic and epizootic mortalities in a wide range of zoo animals. Feral cat control is crucial to reduce infection pressure. Full article
(This article belongs to the Special Issue Pathology in Zoo Animals and Conservation)
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14 pages, 2008 KiB  
Article
Aggression, Erection, and Masturbation in Feral Pottoka Ponies and Implications for Equine Welfare
by Katherine Grillaert
Animals 2022, 12(4), 421; https://doi.org/10.3390/ani12040421 - 10 Feb 2022
Cited by 2 | Viewed by 5305
Abstract
Erection and masturbation in horses are considered unwanted behaviors in training contexts, despite recognition that these are naturally occurring behaviors that are integral to the welfare of male horses. Equestrians, especially those who use positive reinforcement in their training, expressed concern that the [...] Read more.
Erection and masturbation in horses are considered unwanted behaviors in training contexts, despite recognition that these are naturally occurring behaviors that are integral to the welfare of male horses. Equestrians, especially those who use positive reinforcement in their training, expressed concern that the presence of such behaviors might be associated with aggressive or sexual behaviors aimed at humans participating in horse-human interactions. The implications of such attitudes could negatively affect male horses by excluding them from welfare-friendly training systems. In this study, feral stallions were observed to describe and quantify behaviors that occurred before, during, and after erection and masturbation, and to identify change in arousal. This study did not find evidence that erection and masturbation are associated with increases in arousal, or to sexual or aggressive behavior toward other horses. The possible presence or induction of erection or masturbation alone might not limit male horses from participating in certain handling, training, or riding contexts. These findings, along with further research, may be used to inform interpretations of horse–human interactions that involve erection or masturbation. Full article
(This article belongs to the Special Issue The Behavior, Management, and Welfare of Male Horses)
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14 pages, 10029 KiB  
Article
Automated Detection of Animals in Low-Resolution Airborne Thermal Imagery
by Anwaar Ulhaq, Peter Adams, Tarnya E. Cox, Asim Khan, Tom Low and Manoranjan Paul
Remote Sens. 2021, 13(16), 3276; https://doi.org/10.3390/rs13163276 - 19 Aug 2021
Cited by 20 | Viewed by 5083
Abstract
Detecting animals to estimate abundance can be difficult, particularly when the habitat is dense or the target animals are fossorial. The recent surge in the use of thermal imagers in ecology and their use in animal detections can increase the accuracy of population [...] Read more.
Detecting animals to estimate abundance can be difficult, particularly when the habitat is dense or the target animals are fossorial. The recent surge in the use of thermal imagers in ecology and their use in animal detections can increase the accuracy of population estimates and improve the subsequent implementation of management programs. However, the use of thermal imagers results in many hours of captured flight videos which require manual review for confirmation of species detection and identification. Therefore, the perceived cost and efficiency trade-off often restricts the use of these systems. Additionally, for many off-the-shelf systems, the exported imagery can be quite low resolution (<9 Hz), increasing the difficulty of using automated detections algorithms to streamline the review process. This paper presents an animal species detection system that utilises the cost-effectiveness of these lower resolution thermal imagers while harnessing the power of transfer learning and an enhanced small object detection algorithm. We have proposed a distant object detection algorithm named Distant-YOLO (D-YOLO) that utilises YOLO (You Only Look Once) and improves its training and structure for the automated detection of target objects in thermal imagery. We trained our system on thermal imaging data of rabbits, their active warrens, feral pigs, and kangaroos collected by thermal imaging researchers in New South Wales and Western Australia. This work will enhance the visual analysis of animal species while performing well on low, medium and high-resolution thermal imagery. Full article
(This article belongs to the Special Issue Advances in Object and Activity Detection in Remote Sensing Imagery)
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17 pages, 8049 KiB  
Article
Spatial Patterns of ‘Ōhi‘a Mortality Associated with Rapid ‘Ōhi‘a Death and Ungulate Presence
by Ryan L. Perroy, Timo Sullivan, David Benitez, R. Flint Hughes, Lisa M. Keith, Eva Brill, Karma Kissinger and Daniel Duda
Forests 2021, 12(8), 1035; https://doi.org/10.3390/f12081035 - 4 Aug 2021
Cited by 21 | Viewed by 7062
Abstract
Effective forest management, particularly during forest disturbance events, requires timely and accurate monitoring information at appropriate spatial scales. In Hawai‘i, widespread ‘ōhi‘a (Metrosideros polymorpha Gaud.) mortality associated with introduced fungal pathogens affects forest stands across the archipelago, further impacting native ecosystems already under [...] Read more.
Effective forest management, particularly during forest disturbance events, requires timely and accurate monitoring information at appropriate spatial scales. In Hawai‘i, widespread ‘ōhi‘a (Metrosideros polymorpha Gaud.) mortality associated with introduced fungal pathogens affects forest stands across the archipelago, further impacting native ecosystems already under threat from invasive species. Here, we share results from an integrated monitoring program based on high resolution (<5 cm) aerial imagery, field sampling, and confirmatory laboratory testing to detect and monitor ‘ōhi‘a mortality at the individual tree level across four representative sites on Hawai‘i island. We developed a custom imaging system for helicopter operations to map thousands of hectares (ha) per flight, a more useful scale than the ten to hundreds of ha typically covered using small, unoccupied aerial systems. Based on collected imagery, we developed a rating system of canopy condition to identify ‘ōhi‘a trees suspected of infection by the fungal pathogens responsible for rapid ‘ōhi‘a death (ROD); we used this system to quickly generate and share suspect tree candidate locations with partner agencies to rapidly detect new mortality outbreaks and prioritize field sampling efforts. In three of the four sites, 98% of laboratory samples collected from suspect trees assigned a high confidence rating (n = 50) and 89% of those assigned a medium confidence rating (n = 117) returned positive detections for the fungal pathogens responsible for ROD. The fourth site, which has a history of unexplained ‘ōhi‘a mortality, exhibited much lower positive detection rates: only 6% of sampled trees assigned a high confidence rating (n = 16) and 0% of the sampled suspect trees assigned a medium confidence rating (n = 20) were found to be positive for the pathogen. The disparity in positive detection rates across study sites illustrates challenges to definitively determine the cause of ‘ōhi‘a mortality from aerial imagery alone. Spatial patterns of ROD-associated ‘ōhi‘a mortality were strongly affected by ungulate presence or absence as measured by the density of suspected ROD trees in fenced (i.e., ungulate-free) and unfenced (i.e., ungulate present) areas. Suspected ROD tree densities in neighboring areas containing ungulates were two to 69 times greater than those found in ungulate-free zones. In one study site, a fence line breach occurred during the study period, and feral ungulates entered an area that was previously ungulate-free. Following the breach, suspect ROD tree densities in this area rose from 0.02 to 2.78 suspect trees/ha, highlighting the need for ungulate control to protect ‘ōhi‘a stands from Ceratocystis-induced mortality and repeat monitoring to detect forest changes and resource threats. Full article
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