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23 pages, 8418 KB  
Article
Untargeted LC–MS Plasma Metabolomics Reveals Altered Amino Acid and Carbohydrate Metabolism in Dairy Calves Supplemented with Direct-Fed Microbials
by Oludotun O. Adelusi, David P. Casper, John O. Adebayo, Ahmed E. Kholif, Ibukun M. Ogunade and Uchenna Y. Anele
Metabolites 2026, 16(7), 441; https://doi.org/10.3390/metabo16070441 (registering DOI) - 25 Jun 2026
Abstract
Background/Objectives: Direct-fed microbials (DFMs) are widely used in dairy calves to improve gut health and mitigate neonatal disorders, yet their systemic metabolic effects remain poorly defined. This study evaluated the impact of DFM supplementation on the plasma metabolome of pre-weaned dairy calves [...] Read more.
Background/Objectives: Direct-fed microbials (DFMs) are widely used in dairy calves to improve gut health and mitigate neonatal disorders, yet their systemic metabolic effects remain poorly defined. This study evaluated the impact of DFM supplementation on the plasma metabolome of pre-weaned dairy calves using untargeted liquid chromatography–mass spectrometry (LC–MS). Methods: Eighty-six Holstein bull calves (2 to 5 days old) were assigned to one of four treatments in a 2 × 2 factorial randomized complete block design: Lactobacillus plantarum in starter (CLP), a culture mix of Bifidobacterium animalis and Lactobacillus animalis in milk replacer (BBCM), and a combination of both (CMLP), or no supplementation (CON). Blood samples collected on days 0 and 56 were subjected to metabolomic profiling, and metabolites were annotated using Human Metabolome Database and Kyoto Encyclopedia of Genes and Genomes databases. Results: A total of 231 plasma metabolites were detected. Compared with CON, 24 metabolites were differentially abundant in DFM-treated calves (fold change ≥ 1.2 or ≤ 0.83; p ≤ 0.05). Supplemented calves exhibited increased abundances of ketone functional groups, aldehydes and amino acid-related metabolites. Metabolite set enrichment analysis identified 11 significantly enriched pathways. Branched-chain amino acid degradation pathways (valine, leucine, and isoleucine) were enriched in CLP and CMLP calves, whereas carbohydrate metabolism pathways, including pentose and glucuronate interconversions, were enriched in the CLP and BBCM groups. Conclusions: These findings demonstrate that DFM supplementation modulates systemic metabolism in dairy calves, particularly pathways involved in amino acid and carbohydrate utilization, suggesting enhanced metabolic efficiency during early life. Full article
(This article belongs to the Special Issue Metabolic Research in Dairy Cattle Health)
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16 pages, 3549 KB  
Article
Covalent Interaction Between High-Amylose Corn Starch and Ferulic Acid: Reshaping of the Structure
by Jiayue Wang, Junqing Zhang, Aoyang Qu, Qingfeng Zhang, Nuo Xu, Biqi Liu, Xinyan Yang, Ning Xu, Ling Guo, Yujun Jiang and Jianguo Sun
Foods 2026, 15(12), 2236; https://doi.org/10.3390/foods15122236 (registering DOI) - 21 Jun 2026
Viewed by 177
Abstract
This study investigated the covalent grafting of ferulic acid (FA) onto high-amylose corn starch (HACS) through controlled moist heat treatment as a strategy to regulate starch structure and digestibility. Fourier transform infrared spectroscopy (FTIR) and proton nuclear magnetic resonance (1H NMR) [...] Read more.
This study investigated the covalent grafting of ferulic acid (FA) onto high-amylose corn starch (HACS) through controlled moist heat treatment as a strategy to regulate starch structure and digestibility. Fourier transform infrared spectroscopy (FTIR) and proton nuclear magnetic resonance (1H NMR) analyses confirmed the formation of ester linkages between HACS and FA. Scanning electron microscopy (SEM) revealed that FA grafting induced a rougher granule surface and increased porosity, while differential scanning calorimetry (DSC) and thermogravimetric analysis (TGA) indicated altered gelatinization behavior and thermal stability. In vitro digestion analysis showed that the rapidly digestible starch content decreased from 23% to 15%, whereas the resistant starch (RS) content increased to 48% after FA grafting. Molecular docking suggested that FA could interact with α-amylase and that covalent modification may reduce enzyme accessibility to starch chains, thereby limiting starch hydrolysis. These findings demonstrate that FA grafting effectively reshapes the structural and digestive properties of HACS and provides a promising approach for developing resistant starch-rich functional food ingredients. Full article
(This article belongs to the Section Grain)
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22 pages, 361 KB  
Article
Effects of Untreated or NaOH-Treated Carob (Ceratonia siliqua) Leaves and Twigs as Partial Wheat Straw Replacements on Growth Performance, Carcass Traits, and Meat Quality of Growing–Finishing Assaf Lambs
by Soha Ghzayel, Halimeh Zoabi, Bassam Abu Aziz, Ahmed E. Kholif, Jihen Jemaï, Alexey Díaz-Reyes, Secundino López and Hajer Ammar
Agriculture 2026, 16(12), 1353; https://doi.org/10.3390/agriculture16121353 (registering DOI) - 19 Jun 2026
Viewed by 266
Abstract
This study evaluated the effects of replacing 25% of wheat straw with dried carob (Ceratonia siliqua) leaves and twigs, either untreated or treated with 5% sodium hydroxide (NaOH), on growth performance, nutrient digestibility, carcass traits, meat quality, blood metabolites, and rumen [...] Read more.
This study evaluated the effects of replacing 25% of wheat straw with dried carob (Ceratonia siliqua) leaves and twigs, either untreated or treated with 5% sodium hydroxide (NaOH), on growth performance, nutrient digestibility, carcass traits, meat quality, blood metabolites, and rumen microbial populations in Assaf lambs. Twenty-four male lambs (2.5 months old; 29 ± 0.5 kg) were randomly assigned to three dietary treatments (n = 8): a control diet containing wheat straw as the sole roughage source, supplemented with a concentrate feed, a diet with 25% untreated carob leaves and twigs (UCL), and a diet with 25% NaOH-treated carob leaves and twigs (TCL). Following a 14-day adaptation period, lambs were fed the corresponding experimental diet for 14 weeks. Carob inclusion improved growth performance, with UCL lambs showing the highest average daily gain (214 g/d) compared with TCL (201 g/d) and control (160 g/d), resulting in improved feed conversion ratio (9.02 vs. 5.68 and 5.63, respectively) (p < 0.001). Blood urea nitrogen was reduced (p < 0.001) in UCL lambs (26.8 vs. 38.5 mg/dL in control), suggesting improved nitrogen retention. Digestibility responses differed between treatments (p < 0.001), as TCL increased dry matter digestibility to 72.6% compared with 65.4% (UCL) and 63.6% (control), indicating enhanced nutrient utilization following NaOH treatment. Both UCL and TCL increased (p < 0.001) carcass weights (up to 24.7 vs. 21.0 kg in control), while TCL achieved the highest dressing percentage (46.6% vs. 43.4%). Meat quality traits were generally unaffected in terms of color (lightness, redness, and yellowness) and water-holding capacity; however, shear force decreased from 33.6 N (control) to 30.0 N (TCL), indicating improved tenderness. Carob inclusion modified meat composition by increasing (p < 0.001) lipid content (12.0–12.2 vs. 9.6%) and improving fatty acid profile, with reduced saturated fatty acids (53.4–56.5 vs. 61.4%) and increased α-linolenic acid (2.04 vs. 1.58%), leading to a lower n-6/n-3 ratio (5.54–5.61 vs. 6.45). Rumen fermentation was also affected (p < 0.001), as carob diets increased total bacterial populations and reduced protozoal counts, suggesting shifts toward more efficient microbial activity. In conclusion, replacing 25% of wheat straw with carob leaves improved growth performance and feed efficiency, with untreated carob primarily enhancing nitrogen utilization and treated carob improving fiber digestibility and carcass yield. These findings support the use of carob by-products as a viable alternative feed resource, although responses depend on processing method and targeted production outcomes. Full article
37 pages, 3760 KB  
Review
Bibliometric Insights and Recent Advances in the Science, Technology, and Sustainability of Açaí (Euterpe oleracea) from Amazonian Staple to Global Superfruit
by Adriano Cezar Delphim, Gerson Lopes Teixeira and Adaucto Bellarmino Pereira-Netto
Foods 2026, 15(12), 2203; https://doi.org/10.3390/foods15122203 - 18 Jun 2026
Viewed by 298
Abstract
Euterpe oleracea Mart. (açaí), a palm fruit native to the Amazon basin, has attracted growing global scientific interest over the past decade owing to its distinctive phytochemical richness and broad functional potential. This narrative review synthesizes research published between 2015 and 2025 on [...] Read more.
Euterpe oleracea Mart. (açaí), a palm fruit native to the Amazon basin, has attracted growing global scientific interest over the past decade owing to its distinctive phytochemical richness and broad functional potential. This narrative review synthesizes research published between 2015 and 2025 on açaí’s nutritional composition, biological activities, food technological applications, processing innovations, by-product valorization, and sustainability challenges. Açaí pulp contains a distinctive nutrient matrix—including anthocyanins (particularly cyanidin-3-glucoside), polyphenols, oleic and linoleic fatty acids, and dietary fiber—underpinning antioxidant, anti-inflammatory, cardioprotective, hepatoprotective, and antiobesity effects demonstrated primarily in in vitro and animal models, with human clinical evidence still limited. Processing strategies such as ultrasound-assisted extraction, nanoencapsulation, freeze-drying, and supercritical CO2 extraction have advanced bioactive stability and bioaccessibility, enabling açaí’s incorporation into dairy products, functional beverages, biodegradable packaging, reformulated meat products, and edible films. Processing residues—seeds and pomace—are increasingly repurposed into nutraceuticals, biosorbents, and bio-based polymers, reinforcing the species’ circular bioeconomy potential. Food safety risks, particularly Trypanosoma cruzi contamination in minimally processed products, require standardized mitigation protocols. Key remaining challenges include the absence of validated bioaccessibility methodologies, the scarcity of human clinical trials, and the need for scalable processing technologies suitable for smallholder production contexts. Overall, açaí emerges as a model bioresource at the convergence of nutrition science, food technology, and environmental sustainability. Full article
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46 pages, 856 KB  
Review
From Brewing By-Products to Next-Generation Food Ingredients: Processing, Functionality, Safety, and Industrial Translation
by Ionut-Dumitru Veleșcu, Ioana Cristina Crivei, Andreea Bianca Balint, Florina Stoica, Florin Daniel Lipșa and Roxana Nicoleta Rațu
Foods 2026, 15(12), 2193; https://doi.org/10.3390/foods15122193 - 17 Jun 2026
Viewed by 166
Abstract
Brewing generates several by-products with high potential for conversion into food in-gredients, including brewer’s spent grain, brewer’s spent yeast, spent hops, and hot trub. These streams contain dietary fibre, proteins, β-glucans, phenolics, minerals, and others with nutritional and technological value. This review evaluates [...] Read more.
Brewing generates several by-products with high potential for conversion into food in-gredients, including brewer’s spent grain, brewer’s spent yeast, spent hops, and hot trub. These streams contain dietary fibre, proteins, β-glucans, phenolics, minerals, and others with nutritional and technological value. This review evaluates their suitability for food applications by linking composition, processing routes, techno-functional behaviour, safety, sensory quality, and industrial readiness. A structured literature search covering publications from 2015 to 2026 was conducted in Web of Science, Scopus, PubMed, and Google Scholar to support a critical narrative synthesis of food-relevant applications of brewing by-products. The review shows that brewer’s spent grain is the most suitable by-product for wider food use, mainly in bakery, snacks, pasta, and cereal-based products, due to its high availability and fibre-rich composition. Brewer’s spent yeast is more appropriate for fraction-based applications involving proteins, peptides, β-glucans, and mannoproteins, especially in dairy products, savoury foods, beverages, and encapsula-tion systems. Spent hops and hot trub are less suitable for direct incorporation, but they may be used for selective recovery of phenolic-rich, antioxidant, flavour-active, or pro-tein-containing fractions. The conversion of these materials into food ingredients depends strongly on stabilization, drying, milling, extraction, fermentation, enzymatic treatment, debittering, and fractionation. Main limitations include high moisture content, short shelf-life, microbial spoilage, compositional variability, bitterness, dark colour, high nucleic acid content in yeast-derived fractions, regulatory uncertainty, and limited pilot-scale validation. Overall, brewing by-products can support the development of up-cycled ingredients when processing, safety, sensory quality, and product compatibility are controlled. Future progress requires standardized recovery protocols, stronger quality control, sensory validation, legal assessment, and scale-up studies to support their use in commercial food production. Full article
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26 pages, 1462 KB  
Review
Strategies for Reducing Antimicrobial Use in Cattle Through Gut Microbiome Modulation: A Systematic Review of Alternatives to Antibiotics
by Zanoxolo Ntsongota, Olusegun Oyebade Ikusika, Mthunzi Mndela and Ishmeal Festus Jaja
Animals 2026, 16(12), 1850; https://doi.org/10.3390/ani16121850 - 15 Jun 2026
Viewed by 290
Abstract
The escalating global threat of antimicrobial resistance (AMR) has intensified efforts to identify safe, effective, and sustainable alternatives to in-feed antibiotics in livestock production. The bovine gastrointestinal microbiome plays a central role in host immunity, nutrient utilization, and disease resilience, positioning microbiome-modulating interventions [...] Read more.
The escalating global threat of antimicrobial resistance (AMR) has intensified efforts to identify safe, effective, and sustainable alternatives to in-feed antibiotics in livestock production. The bovine gastrointestinal microbiome plays a central role in host immunity, nutrient utilization, and disease resilience, positioning microbiome-modulating interventions as promising candidates for antimicrobial stewardship. Despite growing experimental interest, a systematic synthesis of the available evidence in cattle is lacking. This systematic review aimed to evaluate the efficacy of microbiome-modulating interventions, including probiotics, prebiotics, postbiotics, phytogenic feed additives, essential oils, organic acids, and native rumen microbial supplements, as strategies to reduce antimicrobial use in cattle, and to characterize their effects on gut microbial diversity, fermentation characteristics, and host health and performance outcomes. A systematic search of Scopus, Web of Science, and EBSCOhost (including Academic Search Ultimate, MEDLINE with full text, and CAB Abstracts with Full text) was conducted in accordance with PRISMA guidelines. Studies were eligible if they used cattle (dairy cattle, beef cattle, calves, or mixed production systems), employed a microbiome-modulating intervention, and reported at least one microbiological or host outcome. Seventeen peer-reviewed studies published between 2010 and 2025 were included after full-text screening. Risk of bias was assessed using an adapted SYRCLE tool, which identified moderate overall study quality; the majority of included studies were randomized controlled trials or controlled experiments, though reporting of allocation concealment and blinding was inconsistent across studies. Across the 17 included studies, five broad categories of interventions were evaluated: probiotics (n = 5 studies), prebiotics (n = 2), postbiotics and organic acids (n = 4), phytogenic additives and essential oils (n = 4), and native rumen microbial supplements (n = 2). Animals spanned neonatal dairy calves, weaned Holstein calves, dairy heifers, lactating dairy cows, and Bos indicus feedlot beef cattle. Probiotics and organic acids most consistently improved growth performance: benzoic acid supplementation increased average daily gain by 8.4% (p < 0.05) and fructo-oligosaccharide prebiotics elevated body weight at weaning by 6.7% (p < 0.01). Native rumen microbial supplements improved energy-corrected milk yield by up to 3.1% without increasing dry matter intake. Polyphenols and bile acids demonstrated the strongest immunological and disease-preventive effects, reducing calf mortality by approximately 40% and disease severity by approximately 35%, respectively. Microbiome analyses revealed intervention-dependent increases in microbial diversity and shifts toward taxa associated with improved fermentation efficiency, including enrichment of propionate-producing Prevotellaceae, butyrate-associated Ruminococcus, and hindgut Bifidobacterium. Rumen fermentation outcomes included reductions in the acetate:propionate ratio and ammonia-N concentrations and improvements in fiber digestibility of 3.6–4.4 percentage units in dairy cows. Phytogenic additives preserved microbial diversity without inducing broad-spectrum suppression, functioning primarily as microbiome stabilizers rather than direct antimicrobial replacements. This systematic review provides evidence that gut microbiome modulation may enhance growth performance, improve fermentation efficiency, and reduce disease susceptibility in cattle, thereby supporting antimicrobial use reduction across dairy, beef, and mixed production systems. Effect magnitudes varied substantially across intervention categories and production contexts, and study quality was moderate, underscoring the need for larger, pre-registered trials with standardized outcome reporting and direct antibiotic comparator arms. Probiotics, prebiotics, and bile acid metabolites showed the greatest potential as components of integrated antimicrobial stewardship strategies in cattle production. Full article
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2 pages, 512 KB  
Correction
Correction: Sirimalle et al. Impact of Long-Term Agroforestry Systems on Carbon Pools and Sequestration in Top and Deep Soil Layers of Semi-Arid Region of Western India. Forests 2025, 16, 946
by Mahesh Sirimalle, Chiranjeev Kumawat, Raimundo Jiménez-Ballesta, Ramu Meena, Kamlesh Kumar Sharma, Abhik Patra, Kiran Kumar Mohapatra, Dharmendra Tripathi and Arvind Kumawat
Forests 2026, 17(6), 688; https://doi.org/10.3390/f17060688 - 10 Jun 2026
Viewed by 158
Abstract
The authors wish to make the following corrections to this paper [...] Full article
(This article belongs to the Section Forest Soil)
23 pages, 1349 KB  
Article
Assessment of Peptides and Membrane Physico-Chemical Characteristics on Migration Selectivity and Recovery of Antimicrobial Fractions Using Electrodialysis with Ultrafiltration Membrane on a Calf Cruor Hydrolysate
by Véronique Perreault, Jacinthe Thibodeau, Sara García-Vela and Laurent Bazinet
Membranes 2026, 16(6), 202; https://doi.org/10.3390/membranes16060202 - 10 Jun 2026
Viewed by 447
Abstract
In recent years, cruor from slaughterhouse blood has garnered growing interest as a potential source of antimicrobial peptides obtained through enzymatic hydrolysis. In addition, electrodialysis with ultrafiltration membrane (EDUF) represents a strategy for valorizing peptide-rich hydrolysates, enabling the selective separation and concentration of [...] Read more.
In recent years, cruor from slaughterhouse blood has garnered growing interest as a potential source of antimicrobial peptides obtained through enzymatic hydrolysis. In addition, electrodialysis with ultrafiltration membrane (EDUF) represents a strategy for valorizing peptide-rich hydrolysates, enabling the selective separation and concentration of antimicrobial peptides, according to their size and charge. Hence, this study evaluated the potential of EDUF to fractionate, for the first time, calf cruor hydrolysate and explore its use as a novel source of antimicrobial peptides. The resulting peptide fractions were characterized to investigate the selectivity of peptide migration in relation to peptide physico-chemical characteristics and membrane properties and to finally assess their antimicrobial activity. High migration rates of 12.75 ± 2.17 g/m2h and 8.94 ± 0.38 g/m2h were observed for the cationic (P+) and anionic (P) recovery fractions, respectively. These results suggested that peptide migration from calf cruor hydrolysate to both recovery fractions during EDUF was influenced by the combined effects of molecular weight, net charge, hydrophobicity, specific amino acid residues (L, Y), and peptide–membrane interactions. Furthermore, the initial and final hydrolysates as well as P+ fractions exhibited antifungal activities against Paecilomyces spp. and Rhodotorula mucilaginosa with minimum inhibitory concentrations (MIC) ranging from 0.312 to 0.615 mg/mL and minimum fungicidal concentrations (MFCs) ranging from 0.312 to 1.250 mg/mL. In contrast, the P fraction did not exhibit antifungal activity, but a slight anti-Listeria activity was detected, with a MIC of 10 mg/mL. These findings highlight the potential of upcycling calf blood into functional antifungal and antibacterial agents, supporting a circular economy approach and transforming waste streams into value-added ingredients that enhance food preservation. Full article
(This article belongs to the Special Issue Electrodialysis and Novel Electro-Membrane Processes)
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40 pages, 7287 KB  
Review
Probiotic Modulation of Gut Microbiota: Antioxidant Mechanisms and Clinical Benefits in Obesity and Type 2 Diabetes Management
by Hassan Barakat and Hani A. Alfheeaid
Antioxidants 2026, 15(6), 727; https://doi.org/10.3390/antiox15060727 - 8 Jun 2026
Viewed by 289
Abstract
Obesity and type 2 diabetes mellitus (T2DM) represent intertwined global epidemics driven by gut dysbiosis, chronic inflammation, and impaired SCFA production, identifying the microbiome as a therapeutic target. This review synthesizes mechanistic insights and clinical evidence on the role of probiotics as microbiome [...] Read more.
Obesity and type 2 diabetes mellitus (T2DM) represent intertwined global epidemics driven by gut dysbiosis, chronic inflammation, and impaired SCFA production, identifying the microbiome as a therapeutic target. This review synthesizes mechanistic insights and clinical evidence on the role of probiotics as microbiome modulators in the management of metabolic disease. A comprehensive literature search across PubMed, Scopus, Web of Science, and Google Scholar up to May 2026 identified ~230 records using keywords such as probiotics, SCFAs, obesity, and T2DM; a narrative synthesis integrated preclinical, RCT, and meta-analytic data without formal pooling due to heterogeneity. Probiotics restore eubiosis via strain-specific mechanisms, Lacticaseibacillus rhamnosus GG enhances tight junctions (ZO-1), Bifidobacterium breve BBr60 boosts butyrate cross-feeding, and pasteurized Akkermansia muciniphila remodels bile acids (FXR/FGF19), activating G-Protein Coupled Receptor 41 (GPR41)/43-GLP-1 signaling, Treg expansion, and NF-κB suppression. Beyond immunometabolic effects, probiotics mitigate obesity- and T2DM-related oxidative stress by upregulating endogenous antioxidant enzymes (e.g., SOD, catalase, GPx), modulating Nrf2/Keap1 signaling, and reducing lipid peroxidation and other oxidative stress markers in experimental and clinical settings. Meta-analyses of RCTs reveal modest benefits: BMI reductions (~0.3 kg m−2), waist circumference (WC) reductions (1–2 cm), HbA1c reductions (0.3–0.4%), and improvements in homeostatic model assessment of insulin resistance (HOMA-IR), especially with multi-strain (>109 CFU day−1, ≥12 weeks) synbiotics. Innovative strategies—synbiotics, postbiotics, AI-tailored consortia, and fermented dairy—address engraftment and response variability. Current guidelines recommend 109–1011 CFU day−1 using multi-strain formulations for 12–24 weeks alongside lifestyle measures, with regimen selection tailored to the dysbiosis phenotype (e.g., NAFLD). Future longitudinal RCTs integrating multi-omics endpoints with AI-driven strain selection should refine—and ultimately individualize—precision probiotic strategies for metabolic therapy. Full article
(This article belongs to the Special Issue The Interaction Between Gut Microbiota and Host Oxidative Stress)
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25 pages, 3682 KB  
Article
Effect of Genetic Architecture and Partitioning of Training Population on GEBVs, SNP Effects and GWAS: A Simulation Study
by Gaurav Dutta, Hélène Wilmot, Elizabeth D. Schifano and Breno Fragomeni
Genes 2026, 17(6), 670; https://doi.org/10.3390/genes17060670 - 7 Jun 2026
Viewed by 692
Abstract
Background/Objectives: Inconsistency of results in genome-wide association studies (GWAS) has been a challenge for animal breeders and geneticists. Understanding how different training subset configurations influence genomic estimated breeding values (GEBVs) and GWAS is essential for optimizing genomic evaluations. This study aimed to evaluate [...] Read more.
Background/Objectives: Inconsistency of results in genome-wide association studies (GWAS) has been a challenge for animal breeders and geneticists. Understanding how different training subset configurations influence genomic estimated breeding values (GEBVs) and GWAS is essential for optimizing genomic evaluations. This study aimed to evaluate the impact of training population partitioning and QTL architecture on prediction accuracy, GEBV and SNP-effect correlations, and on the consistency of GWAS. Methods: A simulated population consisting of ten breeding generations was partitioned and evaluated on four training scenarios: animal ID, sex, generations, and generation correct.blocks. Moreover, four distinct genetic architectures were simulated, representing combinations of two QTL counts (100 and 1000) and two effect-size distributions (normal and gamma). Phenotypes were available for 10,000 individuals, which were genotyped for 50,000 SNP markers. Results: Across generation blocks, accuracy increased from earlier to more recent generations. GEBV correlations were consistently higher than SNP-effect correlations across scenarios. Adjacent generation blocks showed stronger correlations than distant blocks. Architectures with 1000 QTL yielded higher accuracy than 100 QTL architectures, while effect distribution had limited influence. Manhattan plots showed stable major QTL peaks across subsets. However, reduced peak magnitudes with more noise signals were observed in smaller training sets. Training population size and genetic distance strongly influenced genomic prediction performance. GEBVs were more stable than individual SNP-effect estimates across training configurations. Conclusions: These findings provide insights for interpreting why GWAS results fluctuate more than breeding values due to limited dimensionality of genomic information. Full article
(This article belongs to the Section Animal Genetics and Genomics)
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23 pages, 4039 KB  
Review
Mapping Variability in Bovine Respiratory Disease Risk Factors in Beef Production Systems: A Scoping Review
by Adeolu Adekunle, Alexcia Gaines, Natalie Estefano, Devyani Lenin, Piyush Hole, Rhythm Khandelwal, Reinaldo Cooke and Karun Kaniyamattam
Animals 2026, 16(11), 1726; https://doi.org/10.3390/ani16111726 - 4 Jun 2026
Viewed by 530
Abstract
This scoping review examines bovine respiratory disease (BRD) risk factors across beef production systems to clarify their contribution to disease occurrence and outcomes and to identify gaps that limit effective prevention. Following the PRISMA-ScR guidelines, eight databases (EBSCOhost, Google Scholar, MDPI, PubMed, ScienceDirect, [...] Read more.
This scoping review examines bovine respiratory disease (BRD) risk factors across beef production systems to clarify their contribution to disease occurrence and outcomes and to identify gaps that limit effective prevention. Following the PRISMA-ScR guidelines, eight databases (EBSCOhost, Google Scholar, MDPI, PubMed, ScienceDirect, Journal of Animal Science, Journal of Dairy Science, and Web of Science) were searched for peer-reviewed studies published between 2004 and 2024, yielding 91 eligible studies from 133 screened articles. Data were charted to assess how BRD risk factors have been investigated across cow–calf, stocker/backgrounding, and feedlot systems and categorized into biological, operational, and environmental domains. Twenty-three major risk factors were identified, with transportation stress and commingling most frequently studied in stocker and feedlot systems, while management-related factors such as vaccination were more commonly emphasized in cow–calf operations. The evidence base was heavily skewed toward feedlot populations (62%), with limited focus on cow–calf (13%) and stocker (7%) systems and few longitudinal studies spanning multiple production stages. Overall, the findings reveal substantial heterogeneity in research emphasis and highlight critical gaps in early-life and cross-stage risk assessment. These findings underscore an urgent need for longitudinal, cross-stage cohort studies and standardized BRD surveillance frameworks to address the early-life evidence gap and provide a foundation for more effective, data-driven, integrated disease prevention strategies. Full article
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17 pages, 2894 KB  
Article
Biological Control of Listeria monocytogenes Growth in Fermented Buttermilk Enriched with Microfiltration Retentate
by Piotr Śmigiel, Jarosław Kowalik and Marika Bielecka
Foods 2026, 15(10), 1742; https://doi.org/10.3390/foods15101742 - 14 May 2026
Viewed by 329
Abstract
The use of protective cultures and probiotic lactic acid bacteria is considered a potential strategy for controlling Listeria monocytogenes in food systems, particularly in minimally processed and fermented products. However, the behavior of foodborne pathogens in complex dairy matrices, especially those enriched with [...] Read more.
The use of protective cultures and probiotic lactic acid bacteria is considered a potential strategy for controlling Listeria monocytogenes in food systems, particularly in minimally processed and fermented products. However, the behavior of foodborne pathogens in complex dairy matrices, especially those enriched with byproducts of milk processing, remains insufficiently characterized. The aim of this study was to evaluate the survival of Listeria monocytogenes in buttermilk enriched with retentate obtained after microfiltration, in the presence of the probiotic strain Lactobacillus acidophilus LA-5®. The study was conducted under different storage temperatures to reflect realistic conditions of product distribution and storage. The results demonstrated that fermented buttermilk with added retentate did not support the growth of Listeria monocytogenes under the tested conditions, and a gradual reduction in pathogen counts was observed during storage. The presence of Lactobacillus acidophilus LA-5® was associated with a faster decrease in pathogen levels compared to samples without the probiotic strain. At the same time, lactic acid bacteria maintained high viability throughout the storage period. In contrast, predictive modelling using ComBase indicated the potential for pathogen growth under similar physicochemical conditions. This discrepancy highlights the limitations of predictive models when applied to complex, biologically active food matrices. These findings indicate that fermented buttermilk enriched with retentate may provide conditions limiting the survival of L. monocytogenes. However, the mechanisms responsible for the observed inhibition were not directly investigated in this study and require further research. The results emphasize the importance of experimental validation of predictive microbiology models and contribute to a better understanding of pathogen behavior in fermented dairy systems. Full article
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19 pages, 720 KB  
Systematic Review
Food-Derived Antihypertensive Peptides: Mechanisms, Multi-Methodological Approaches, Bioavailability, and Functional Food Applications
by Lucía Castillejos Ordóñez, Nathaly Marcela Guzmán Pineda, Beatriz Isabella Encalada Lizcano, Astrid Carolina Lugo Díaz, Luis Jorge Corzo Ríos, Cristian Jimenez Martínez and Jorge Carlos Ruiz Ruiz
Molecules 2026, 31(10), 1648; https://doi.org/10.3390/molecules31101648 - 13 May 2026
Viewed by 561
Abstract
This systematic review was conducted and reported according to the PRISMA 2020 statement to synthesize evidence published between January 2020 and January 2025 on food-derived antihypertensive peptides, with emphasis on mechanisms of action, molecular stability, bioavailability, and functional food applications. PubMed, Scopus, and [...] Read more.
This systematic review was conducted and reported according to the PRISMA 2020 statement to synthesize evidence published between January 2020 and January 2025 on food-derived antihypertensive peptides, with emphasis on mechanisms of action, molecular stability, bioavailability, and functional food applications. PubMed, Scopus, and Web of Science were searched using combined terms related to bioactive or ACE-inhibitory peptides, stability or bioavailability, and alternative protein sources. Original peer-reviewed studies in English evaluating antihypertensive or ACE-inhibitory peptides from plant, marine, insect, fungal, dairy, or terrestrial animal matrices were considered eligible when they reported experimental evidence on activity, stability, transport, or in vivo efficacy. Three reviewers independently screened records and extracted data. A total of 177 studies were included. Plant and marine matrices accounted for approximately 72% of the evidence base, with a strong focus on low-molecular-weight peptides (<3 kDa) and multistage validation pipelines integrating in silico screening, in vitro enzymatic assays, Caco-2 transport models, ex vivo assays, and spontaneously hypertensive rat studies. Overall, the evidence supports the antihypertensive potential of selected food-derived peptides, particularly through ACE inhibition and related vascular mechanisms. Encapsulation and advanced delivery approaches improved peptide stability and bioavailability in several studies. Food-derived antihypertensive peptides represent promising candidates for functional foods and nutraceuticals; however, greater methodological standardization, formal risk-of-bias assessment in primary studies, and well-designed human trials remain necessary to strengthen translation into practice. Full article
(This article belongs to the Special Issue Bioavailability of Bioactive Food Compounds)
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19 pages, 1446 KB  
Article
The Effect of Prebiotic (Inulin) Addition and Storage Time on the Fatty Acid Profile, Mineral Content, and Sensory Properties of Probiotic Fermented Drinks Produced from Cow’s Milk with Different Fat Contents
by Beata Paszczyk, Marika Bielecka and Jarosław Kowalik
Appl. Sci. 2026, 16(10), 4838; https://doi.org/10.3390/app16104838 - 13 May 2026
Viewed by 653
Abstract
This study evaluated the effect of inulin addition and storage time on the chemical composition, fatty acid profile, mineral content, volatile compounds, and sensory properties of fermented milk drinks produced from cow’s milk with different fat contents (2% and 4%) using the probiotic [...] Read more.
This study evaluated the effect of inulin addition and storage time on the chemical composition, fatty acid profile, mineral content, volatile compounds, and sensory properties of fermented milk drinks produced from cow’s milk with different fat contents (2% and 4%) using the probiotic strain Bifidobacterium animalis subsp. lactis BB-12. Four drink variants were produced: control drinks and drinks supplemented with 2% inulin. Analyses were conducted over 21-day refrigerated storage. The results showed that fat standardization led to significant differences in fat content, whereas protein levels remained relatively stable across samples. The addition of inulin significantly increased dry matter content and improved texture-related sensory attributes, including viscosity, creaminess, and smoothness. GC–IMS analysis revealed that fermentation and storage led to a progressive increase in the contents of volatile compounds, including esters, alcohols, and ketones, with the most complex aroma profile observed after 14 days. Samples with the higher fat content and inulin addition exhibited a greater diversity and intensity of volatile compounds compared to the control drinks. In turn, storage time influenced fatty acid composition, including CLA content, and caused fluctuations in mineral concentrations. Additionally, inulin addition and a higher fat content positively affected the survival of Bifidobacterium animalis subsp. lactis BB-12 during storage. The results indicate that the combined application of inulin and an increased fat content enhances the functional and sensory quality of fermented milk drinks, demonstrating the potential of synbiotic formulations in dairy product development. Full article
(This article belongs to the Special Issue Development and Research of Novel Food Products)
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Review
Hematological Parameters in Sheep: Variability, Determinants, and Applications in Flock Health Management
by Vera Korelidou, Panagiotis Simitzis, Theofilos Massouras and Athanasios I. Gelasakis
Animals 2026, 16(9), 1295; https://doi.org/10.3390/ani16091295 - 22 Apr 2026
Cited by 1 | Viewed by 589
Abstract
Blood is a key component of organisms, serving numerous functions, including metabolism, innate and humoral responses, and hemostasis. Variations in hematological parameters can indicate the presence of infectious and non-infectious diseases, chronic stress, and other pathological or physiological conditions. Complete blood count testing [...] Read more.
Blood is a key component of organisms, serving numerous functions, including metabolism, innate and humoral responses, and hemostasis. Variations in hematological parameters can indicate the presence of infectious and non-infectious diseases, chronic stress, and other pathological or physiological conditions. Complete blood count testing is common in human and veterinary medicine and, when combined with clinical examination, contributes to disease diagnosis and prognosis and the monitoring of therapeutic progression. Nevertheless, hematological analysis is not routinely performed in sheep due to the lack of case-specific reference intervals, complicating the interpretation of the results. Indeed, hematological parameters may be affected by various non-pathological (environmental, genetic, physiological) and pathological factors, and they require further understanding and relevant adjustments to be universally applicable. Therefore, the objective of this paper is to summarize the existing literature and describe how various pathological and non-pathological factors affect hematological parameters in sheep, thereby supporting their incorporation into health management practices. Full article
(This article belongs to the Special Issue Current Research in Veterinary Hematology)
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