Search Results (815)

Sex-based immunological differences significantly influence the outcome of vaccination, yet the molecular mediators underpinning these differences remain largely elusive. MicroRNAs (miRNAs), key post-transcriptional regulators of gene expression, have emerged as critical modulators of innate and adaptive immune responses. In this study, we investigated the expression profile of selected circulating miRNAs as potential biomarkers of sex-specific humoral responses to the mRNA COVID-19 vaccine in a cohort of health care workers. Plasma samples were collected longitudinally at a defined time point (average 71 days) post-vaccination and analyzed using RT-qPCR to quantify a panel of immune-relevant miRNAs. Anti-spike (anti-S) IgG titers were measured by chemiluminescent immunoassays. Our results revealed sex-dependent differences in miRNA expression dynamics, with miR-221-3p and miR-148a-3p significantly overexpressed in vaccinated female HCWs and miR-155-5p overexpressed in vaccinated males. MiR-148a-3p showed a significant association with anti-S/RBD (RBD: receptor binding domain) IgG levels in a sex-specific manner. Bioinformatic analysis for miRNA targets indicated distinct regulatory networks and pathways involved in innate and adaptive immune responses, potentially underlying the differential immune activation observed between males and females. These findings support the utility of circulating miRNAs as minimally invasive biomarkers for monitoring and predicting sex-specific vaccine-induced immune responses and provide mechanistic insights that may inform tailored vaccination strategies. Full article

With the explosive growth of Internet of Things (IoT) devices, massive amounts of heterogeneous data are continuously generated. However, IoT data transactions and sharing face multiple challenges such as limited device resources, untrustworthy network environment, highly sensitive user privacy, and serious data silos. How to achieve fine-grained access control and privacy protection for massive devices while ensuring secure and reliable data circulation has become a key issue that needs to be urgently addressed in the current IoT field. To address the above challenges, this paper proposes a blockchain-based data transaction and privacy protection framework. First, the framework builds a multi-layer security architecture that integrates blockchain and IPFS and adapts to the “end–edge–cloud” collaborative characteristics of IoT. Secondly, a data sharing mechanism that takes into account both access control and interest balance is designed. On the one hand, the mechanism uses attribute-based encryption (ABE) technology to achieve dynamic and fine-grained access control for massive heterogeneous IoT devices; on the other hand, it introduces a game theory-driven dynamic pricing model to effectively balance the interests of both data supply and demand. Finally, in response to the needs of confidential analysis of IoT data, a secure computing scheme based on CKKS fully homomorphic encryption is proposed, which supports efficient statistical analysis of encrypted sensor data without leaking privacy. Security analysis and experimental results show that this scheme is secure under standard cryptographic assumptions and can effectively resist common attacks in the IoT environment. Prototype system testing verifies the functional completeness and performance feasibility of the scheme, providing a complete and effective technical solution to address the challenges of data integrity, verifiable transactions, and fine-grained access control, while mitigating the reliance on a trusted central authority in IoT data sharing. Full article

Forest ginseng (FG) is a rare medicinal and culinary plant in China, and its drying quality is heavily dependent on the drying method. This study investigated the effects of traditional hot air drying (HAD) and the self-developed negative-pressure circulating airflow-assisted desiccator drying (PCAD) method on the quality of FG using metabolomics and enzyme activity. The results revealed that the enzyme activities of dried FG were reduced considerably. PCAD preserved higher enzyme activity than HAD. Metabolomics data demonstrate that HAD promotes the formation of primary metabolites (amino acids, lipids, nucleotides, etc.), whereas PCAD promotes the formation of secondary metabolites (terpenoids, phenolic acids, etc.). A change-transformation network was built by combining the metabolites listed above and their biosynthetic pathways, and it was discovered that these biosynthetic pathways were primarily associated with the mevalonate (MVA) pathway, lipid metabolism, phenylpropane biosynthesis, and nucleotide metabolism. It is also believed that these findings are related to the chemical stimulation induced by thermal degradation and the ongoing catalysis of enzyme responses to drought stress. The facts presented above will give a scientific basis for the selection of FG drying processes, as well as helpful references for increasing the nutritional quality of processed FG. Full article

Personal Rapid Transit (PRT) and Group Rapid Transit (GRT) are classes of fully automated public transport systems, where passengers can travel in small vehicles on an interconnected, grade-separated network of guideways, non-stop, from origin to destination. PRT and GRT are considered sustainable as they are low-emission and able to attract car drivers. The parameterized cost modeling framework developed in this paper has the advantage that profitability of different PRT/GRT systems can be rapidly verified in a transparent way and in function of a variety of relevant system parameters. This framework may contribute to a more transparent, rapid, and low-cost evaluation of PRT/GRT schemes for planning and decision-making purposes. The main innovation is the introduction of the “peak hour network saturation” S: the number of vehicles in circulation during peak hour divided by the maximum number of vehicles running at line speed with minimum time headways. It is an index that aggregates the main uncertainties in the planning process, namely the demand level relative to the supply level. Furthermore, a maximum S can be estimated for a PRT/GRT project, even without a detailed demand estimation. The profit per trip is analytically derived based on S and a series of more certain parameters, such as fares, capital and maintenance costs, daily demand curve, empty vehicle share, and physical properties of the system. To demonstrate the ability of the framework to analyze profitability in function of various parameters, we apply the methods to a single vehicle PRT, a platooned PRT, and a mixed PRT/GRT. The results show that PRT services with trip length proportional fares could be profitable already for $S>0.25$. The PRT capacity, profitability, and robustness to tripled infrastructure costs can be increased by vehicle platooning or GRT service during peak hours. Full article

Saffron (Crocus sativus L.) is a vegetatively propagated crop of high economic and cultural value, potentially affected by viral infections that may impact its productivity. Despite Iran’s dominance in global saffron production, knowledge of its virome remains limited. In this study, we conducted the first nationwide virome survey of saffron in Iran employing a high-throughput sequencing (HTS) approach on pooled samples obtained from eleven provinces in Iran and one location in Afghanistan. Members of three virus families were detected—Potyviridae (Potyvirus), Solemoviridae (Polerovirus), and Geminiviridae (Mastrevirus)—as well as one satellite from the family Alphasatellitidae (Clecrusatellite). A novel Potyvirus, tentatively named saffron Iran virus (SaIRV) and detected in three provinces, shares less than 68% nucleotide identity with known Potyvirus species, thus meeting the ICTV criteria for designation as a new species. Genetic diversity analyses revealed substantial intrapopulation SNP variation but no clear geographical clustering. Among the two wild Crocus species sampled, only Crocus speciosus harbored turnip mosaic virus. Virome network and phylogenetic analyses confirmed widespread viral circulation likely driven by corm-mediated propagation. Our findings highlight the need for targeted certification programs and biological characterization of key viruses to mitigate potential impacts on saffron yield and quality. Full article

As dengue is an increasing global health threat, a better understanding of the global circulation dynamics and its determinants would be helpful for precise prevention and control of dengue. The dynamics of global circulation of the four dengue virus serotypes were explored utilizing genetic sequences through a network-based method. Four new circulation indicators, including local intensity, betweenness centrality, tip frequency, and persistence time, were defined. Three circulation roles, including source, hub, and destination, were proposed on the basis of new indicators. Spatial and temporal changes of the three circulation roles, along with the persistence time, were explored. Important determinants were also evaluated by machine learning models. Thailand, Indonesia, and Vietnam in Asia and Venezuela and Colombia in Americas were the sources for all four serotypes in different decades. Destinations were observed mostly in island regions. Over the decades, the number of regions with different circulation roles and persistence of DENV-1 increased significantly. Climate and airline factors were involved in the important determinants to circulation roles and persistence of dengue. The roles identified in the global circulation of dengue and important determinants, including climate and airline factors, provide new insights into global dynamics and are beneficial for controlling dengue. Full article

Natural hydrogen is generated by fairly deep processes and/or in low-permeability rocks. In such contexts, fluids circulate mainly through the network of faults and fractures. However, hydrogen flows from these hydrogen-generating layers can reach sedimentary rocks with more typical permeability and porosity, allowing H₂ flows to spread out rather than be concentrated in fractures. In that case, three different H₂ transport modes exist: advection (displacement of water carrying dissolved gas), diffusion, and free gas Darcy flow. Numerical models have been run to compare the efficiency of these different modes and the pathway they imply for the H₂ in a sedimentary basin with active aquifers. The results show the key roles of these aquifers but also the competition between free gas flow and the dissolved gas displacement which can go in opposite directions. Even with a conservative hypothesis on the H₂ charge, a gaseous phase exists at few kilometers deep as well as free gas accumulation. Gaseous phase displacement could be the faster and diffusion is neglectable. The modeling also allows us to predict where H₂ is expected in the soil: in fault zones, eventually above accumulations, and, more likely, due to exsolution, above shallow aquifers. Full article

The Surface Water and Ocean Topography (SWOT) mission provides unprecedented high-resolution observations of sea-surface height. However, their direct use in ocean circulation studies is complicated by the presence of small-scale unbalanced motion signals and instrumental noise, which hinder accurate estimation of geostrophic velocities. To address these limitations, we developed an adaptive convolutional neural network (CNN)-based filtering technique that refines SWOT-derived sea-level observations. The network includes multi-head attention layers to exploit information on concurrent wind fields and standard altimetry interpolation errors. We train the model with a custom loss function that accounts for the differences between geostrophic velocities computed from SWOT sea-surface topography and simultaneous in-situ drifter velocities. We compare our method to existing filtering techniques, including a U-Net-based model and a variational noise-reduction filter. Our adaptive-filtering CNN produces accurate velocity estimates while preserving small-scale features and achieving a substantial noise reduction in the spectral domain. By combining satellite and in-situ data with machine learning, this work demonstrates the potential of an adaptive CNN-based filtering approach to enhance the accuracy and reliability of SWOT-derived sea-level and velocity estimates, providing a valuable tool for global oceanographic applications. Full article

Cystic echinococcosis is a zoonosis caused by the cestode Echinococcus granulosus sensu stricto. Population genetic studies and phylogeographic patterns are essential to understanding the transmission dynamics of this parasite under varying environmental conditions. In this study, the genetic diversity of E. granulosus s.s. was evaluated using 46 hydatid cyst samples obtained from sheep, goats, cattle, and humans across three regions of Chile: Coquimbo, La Araucanía, and Magallanes. Mitochondrial cox1 gene sequences were analyzed and compared with reference sequences reported from South America, Europe, Africa, Asia, and Oceania. In Chile, the EG01 haplotype was the predominant haplotype. A total of four haplotypes were identified, with low haplotype diversity (Hd = 0.461 ± 0.00637) and low nucleotide diversity (π = 0.00181 ± 0.00036). The haplotype network displayed a star-like configuration, with the EG01 genotype at the center, suggesting a potentially ancestral or widely distributed lineage. In Coquimbo (Tajima’s D = −0.93302, p = 0.061; Fu’s Fs = −0.003, p = 0.502) and Magallanes (Tajima’s D = −0.17406, p = 0.386; Fu’s Fs = −0.121, p = 0.414), both neutrality tests were non-significant, indicating no strong evidence for recent population expansion or selection. Star-like haplotype network patterns were also observed in populations from Europe, the Middle East, Asia, Africa, and Oceania, with the EG01 genotype occupying the central position. The population genetic structure of Echinococcus granulosus s.s. in Chile demonstrates considerable complexity, with EG01 as the predominant haplotype. Further comprehensive studies are required to assess the intraspecific genetic variability of E. granulosus s.s. throughout Chile and to determine whether this variability influences the key biological traits of the parasite. This structure may prove even more complex when longer fragments are analyzed, which could allow for the detection of finer-scale microdiversity among isolates from different hosts. We recommended that future cystic echinococcosis control programs take into account the genetic variability of E. granulosus s.s. strains circulating in each endemic region, to better understand their epidemiological, immunological, and possibly pathological differences. Full article

The present paper reports for the first time the comparison of radar-derived eddy dissipation rate (EDR) and vertical velocity with measurements from six aircraft for an intense squall line crossing Hong Kong. The study objectives are three-fold: (i) to characterise the structural dynamics of the intense squall line; (ii) to identify the dynamical change in EDR and vertical velocity during its eastward propagation across Hong Kong with a view to gaining insight into the intensity change of the squall line and the severity of its impact on aircraft flying near it; (iii) to carry out quantitative comparison of EDR and vertical velocity derived from remote sensing instruments, i.e., weather radars and in situ measurements from aircraft, so that the quality of the former dataset can be evaluated by the latter. During the passage of the squall line and taking reference of the radar reflectivity, vertical circulation and the subsiding flow at the rear, it appeared to be weakening in crossing over Hong Kong, possibly due to land friction by terrain and urban morphology. This is also consistent with the maximum gusts recorded by the dense network of ground-based anemometers in Hong Kong. However, from the EDR and the vertical velocity of the aircraft, the weakening trend was not very apparent, and rather severe turbulence was still recorded by the aircraft flying through the squall line into the region with stratiform precipitation when the latter reached the eastern coast of Hong Kong. In general, the radar-based and the aircraft-based EDRs are consistent with each other. The radar-retrieved maximum vertical velocity may be smaller in magnitude at times, possibly arising from the limited spatial and temporal resolutions of the aircraft data. The results of this paper could be a useful reference for the development of radar-based turbulence products for aviation applications. Full article

The aim of this paper is to tailor the geometry and material parameters of a three-layer railway track model to achieve favorable properties for the circulation of high-speed trains at very high velocities. The three layers imply that the model should have three critical velocities for resonance. However, in many cases, some of these values are missing and must be replaced by pseudo-critical values. Since no resonance occurs at pseudo-critical velocities, even in the absence of damping, deflections never reach infinity. By using optimization techniques, it is possible to adjust the model’s parameters, so that the increase in vibrations remains minimal and does not pose a real danger. In this way, circulation velocities could be extended beyond the critical value, thereby increasing the network capacity and, consequently, improving the competitiveness of rail transport compared to other modes of transportation, thus contributing to decarbonization. The presented results are preliminary and require further analysis and validation. Several optimization techniques are implemented, leading to the establishment of designs that already have rather high pseudo-critical velocities. Further research will show how these theoretical findings can be utilized in practice. Full article

Bone metastasis remains a significant cause of morbidity and diminished quality of life in patients with advanced breast, prostate, and lung cancers. Emerging research highlights the pivotal role of reversible epigenetic alterations, including DNA methylation, histone modifications, chromatin remodeling complex dysregulation, and non-coding RNA networks, in orchestrating each phase of skeletal colonization. Site-specific promoter hypermethylation of tumor suppressor genes such as HIN-1 and RASSF1A, alongside global DNA hypomethylation that activates metastasis-associated genes, contributes to cancer cell plasticity and facilitates epithelial-to-mesenchymal transition (EMT). Key histone modifiers, including KLF5, EZH2, and the demethylases KDM4/6, regulate osteoclastogenic signaling pathways and the transition between metastatic dormancy and reactivation. Simultaneously, SWI/SNF chromatin remodelers such as BRG1 and BRM reconfigure enhancer–promoter interactions that promote bone tropism. Non-coding RNAs, including miRNAs, lncRNAs, and circRNAs (e.g., miR-34a, NORAD, circIKBKB), circulate via exosomes to modulate the RANKL/OPG axis, thereby conditioning the bone microenvironment and fostering the formation of a pre-metastatic niche. These mechanistic insights have accelerated the development of epigenetic therapies. DNA methyltransferase inhibitors (e.g., decitabine, guadecitabine) have shown promise in attenuating osteoclast differentiation, while histone deacetylase inhibitors display context-dependent effects on tumor progression and bone remodeling. Inhibitors targeting EZH2, BET proteins, and KDM1A are now advancing through early-phase clinical trials, often in combination with bisphosphonates or immune checkpoint inhibitors. Moreover, novel approaches such as CRISPR/dCas9-based epigenome editing and RNA-targeted therapies offer locus-specific reprogramming potential. Together, these advances position epigenetic modulation as a promising axis in precision oncology aimed at interrupting the pathological crosstalk between tumor cells and the bone microenvironment. This review synthesizes current mechanistic understanding, evaluates the therapeutic landscape, and outlines the translational challenges ahead in leveraging epigenetic science to prevent and treat bone metastases. Full article

This article presents a new method of parametric shaping of buildings with buffer spaces characterized by complex forms and effective thermal operation in the moderate climate of the Central Europe Plane. The parameterization of an elaborated thermal qualitative model of buildings with buffer spaces and its configuration based on computer simulations of thermal operation of many discrete models are the specific features of the method. The model uses various original building shapes and a new parametric artificial neural network (a) to automate the calculations and recording of results and (b) to predict a number of new buildings with buffer spaces characterized by effective thermal operation. The configuration of the parametric quantitative model was carried out based on the simulation results of 343 discrete models defined by means of ten independent variables grouping the properties of the building and buffer space related to their forms, materials and air circulation. The analysis performed for the adopted parameter variability ranges indicates a varied impact of these independent variables on the thermal operation of buildings located in a moderate climate. The infiltration and ventilation and physical properties of the windows and walls are the independent variables that most influence the energy savings utilized by the examined buildings with buffer spaces. The optimal values of these variables allow up to 50–60% of the energy supplied by the HVAC system to be saved. The accuracy and universality of the method will continuously be increased in future research by increasing the types and ranges of independent variables. Full article

Objectives: Saffron, a traditional Chinese medicine, is renowned for its pharmacological effects in promoting blood circulation, resolving blood stasis, regulating menstruation, detoxification, and alleviating mental disturbances. Trans-crocetin, its principal bioactive component, exhibits significant anti-hypoxic activity. The clinical development and therapeutic efficacy of trans-crocetin are limited by its instability, poor solubility, and low bioavailability. Conversion of trans-crocetin into trans-sodium crocetinate (TSC) enhances its solubility, stability, and bioavailability, thereby amplifying its anti-hypoxic potential. Methods: This study integrates network pharmacology with in vivo and in vitro validation to elucidate the molecular targets and mechanisms underlying TSC’s therapeutic effects against high-altitude acute lung injury (HALI), aiming to identify novel treatment strategies. Results: TSC effectively reversed hypoxia-induced biochemical abnormalities, ameliorated lung histopathological damage, and suppressed systemic inflammation and oxidative stress in HALI rats. In vitro, TSC mitigated CoCl₂-induced hypoxia injury in human pulmonary microvascular endothelial cells (HPMECs) by reducing inflammatory cytokines, oxidative stress, and ROS accumulation while restoring mitochondrial membrane potential. Network pharmacology and pathway analysis revealed that TSC primarily targets the EGFR/PI3K/AKT/NF-κB signaling axis. Molecular docking and dynamics simulations demonstrated stable binding interactions between TSC and key components of this pathway. ELISA and RT-qPCR confirmed that TSC significantly downregulated the expression of EGFR, PI3K, AKT, NF-κB, and their associated mRNAs. Conclusions: TSC alleviates high-altitude hypoxia-induced lung injury by inhibiting the EGFR/PI3K/AKT/NF-κB signaling pathway, thereby attenuating inflammatory responses, oxidative stress, and restoring mitochondrial function. These findings highlight TSC as a promising therapeutic agent for HALI. Full article

Traditional seed supply chains face several hidden risks. Certain regulatory departments tend to focus primarily on entity circulation while neglecting the origin and accuracy of data in seed quality supervision, resulting in limited precision and low credibility of traceability information related to quality and safety. Blockchain technology offers a systematic solution to key issues such as data source distortion and insufficient regulatory penetration in the seed supply chain by enabling data rights confirmation, tamper-proof traceability, smart contract execution, and multi-node consensus mechanisms. In this study, we developed a system that integrates blockchain and neural networks to provide seed traceability services. When uploading seed traceability information, the neural network models are employed to verify the authenticity of information provided by humans and save the tags on the blockchain. Various neural network architectures, such as Multilayer Perceptron, Recurrent Neural Network, Fully Convolutional Neural Network, and Long Short-term Memory model architectures, have been tested to determine the authenticity of seed traceability information. Among these, the Long Short-term Memory model architecture demonstrated the highest accuracy, with an accuracy rate of 90.65%. The results demonstrated that neural networks have significant research value and potential to assess the authenticity of information in a blockchain. In the application scenario of seed quality traceability, using blockchain and neural networks to determine the authenticity of seed traceability information provides a new solution for seed traceability. This system empowers farmers by providing trustworthy seed quality information, enabling better purchasing decisions and reducing risks from counterfeit or substandard seeds. Furthermore, this mechanism fosters market circulation of certified high-quality seeds, elevates crop yields, and contributes to the sustainable growth of agricultural systems. Full article