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Keywords = cecal bacterial profile

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17 pages, 3883 KiB  
Article
Effects of Feather-Pecking Phenotype on Physiological and Neurobiological Characteristics and Gut Microbiota Profile of Goslings
by Mingfeng Wang, Yujiao Guo, Zhengfeng Cao, Qi Xu, Guohong Chen and Yang Chen
Animals 2025, 15(14), 2122; https://doi.org/10.3390/ani15142122 - 17 Jul 2025
Viewed by 234
Abstract
FP is a detrimental behavior for chickens, ducks, and geese associated with numerous physiological and neurobiological characteristics, which have been identified in many species as regulated by the gut microbiota. However, it is unknown whether and how gut microbiota influences FP by regulating [...] Read more.
FP is a detrimental behavior for chickens, ducks, and geese associated with numerous physiological and neurobiological characteristics, which have been identified in many species as regulated by the gut microbiota. However, it is unknown whether and how gut microbiota influences FP by regulating neurotransmitter systems in geese. This study aimed to investigate the phenotypic correlation between feather pecking and changes in physiological, neurobiological, and gut microbiota profiles in gosling. Three behavioral phenotypes were observed in goslings, including severe feather peckers (SFPs), victims of SFPs, and non-peckers (NFPs). The significantly lower feather scores and body weights were observed in victims compared to both SFPs and NFPs (p < 0.05). Regarding the physiological phenotype, victims had higher dopamine (DA) levels than NFPs, and SFPs had lower 5-hydroxytryptamine (5-HT) in the serum than NFPs (p < 0.001), with intermediate 5-HT levels in victims. Victims had lower glutathione peroxidase (GSH-Px) compared to SFPs and NFPs (p < 0.05). Moreover, higher mRNA expression levels of HTR1A, SLC6A4, and TPH2 in the 5-HT metabolic pathway were detected in NFPs than those in SFPs and victims (p < 0.05). In addition, regarding gut microbiota measured by 16S rRNA sequencing, SFPs had lower diversity and comparable cecal microbiota compared to victims and NFPs. Proteobacteria, Verrucomicrobia, Ruminococcus spp., and Bilophila spp. were enriched in SFPs, while Bacteroides and Parabacteroides were enriched in NFPs. From the predicted bacterial functional genes, the cAMP signaling pathway, cGMP–PKG signaling pathway, and pyruvate metabolism were activated in SFPs. The correlation analysis revealed that the genera Bacteroides spp. were associated with differences in 5-HT metabolism between the SFPs and NFPs. In summary, differences in the cecal microbiota profile and 5-HT metabolism drive FP phenotypes, which could be associated with the reduced gut abundance of the genera Bacteroides spp. Full article
(This article belongs to the Section Animal Physiology)
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20 pages, 10628 KiB  
Article
Temporal and Spatial Dynamics of Tumor–Host Microbiota in Breast Cancer Progression
by Qi Xu, Aikun Fu, Nan Wang and Zhizhen Zhang
Microorganisms 2025, 13(7), 1632; https://doi.org/10.3390/microorganisms13071632 - 10 Jul 2025
Viewed by 585
Abstract
Deciphering the spatiotemporal distribution of bacteria during breast cancer progression may provide critical insights for developing bacterial-based therapeutic strategies. Using a murine breast cancer model, we longitudinally profiled the microbiota in breast tumor tissue, mammary gland, spleen, and cecal contents at 3-, 5-, [...] Read more.
Deciphering the spatiotemporal distribution of bacteria during breast cancer progression may provide critical insights for developing bacterial-based therapeutic strategies. Using a murine breast cancer model, we longitudinally profiled the microbiota in breast tumor tissue, mammary gland, spleen, and cecal contents at 3-, 5-, and 7- weeks post-tumor implantation through 16S rRNA gene sequencing. Breast tumor progression was associated with lung metastasis and splenomegaly, accompanied by distinct tissue-specific microbial dynamics. While alpha diversity remained stable in tumors, mammary tissue, and cecal contents, it significantly increased in the spleen (p < 0.05). Longitudinal analysis revealed a progressive rise in Firmicutes and a decline in Proteobacteria abundance within tumors, mammary tissue, and cecum, whereas the spleen microbiota displayed unique phylum-level compositional shifts. Tissue- and time-dependent microbial signatures were identified at phylum, genus, and species levels during breast tumor progression. Strikingly, the spleen microbiota integrated nearly all genera enriched in other sites, suggesting its potential role as a microbial reservoir. Gut-associated genera (Lactobacillus, Desulfovibrio, Helicobacter) colonized both cecal contents and the spleen, with Lactobacillus consistently detected across all tissues, suggesting microbial translocation. The spleen exhibited uniquely elevated diversity and compositional shifts, potentially driving splenomegaly. These results delineated the trajectory of microbiota translocation and colonization, and demonstrated tissue-specific microbial redistribution during breast tumorigenesis, offering valuable implications for advancing microbiome-targeted cancer therapies. Full article
(This article belongs to the Special Issue Host–Microbiome Cross-Talk in Cancer Development and Progression)
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16 pages, 6845 KiB  
Article
Antimicrobial and Immunomodulatory Effects of Punicalagin and Meropenem in a Murine Model of Sublethal Sepsis
by Liliane dos Santos Rodrigues, Priscila Mendonça Mendes, André Alvares Marques Vale, José Lima Pereira-Filho, Elizabeth Soares Fernandes, Joicy Cortez de Sá Sousa, Márcia Cristina Gonçalves Maciel and Valério Monteiro-Neto
Antibiotics 2025, 14(7), 626; https://doi.org/10.3390/antibiotics14070626 - 20 Jun 2025
Cited by 1 | Viewed by 507
Abstract
Background: Punicalagin (Pg), a major ellagitannin derived from pomegranates, possesses antimicrobial, antioxidant, and immunomodulatory properties, suggesting its potential as an adjunctive therapy for sepsis. Objectives: This study investigated the synergistic effects of punicalagin and meropenem in a murine model of sublethal sepsis induced [...] Read more.
Background: Punicalagin (Pg), a major ellagitannin derived from pomegranates, possesses antimicrobial, antioxidant, and immunomodulatory properties, suggesting its potential as an adjunctive therapy for sepsis. Objectives: This study investigated the synergistic effects of punicalagin and meropenem in a murine model of sublethal sepsis induced by cecal ligation and puncture (CLP). Methods: Mice were treated with punicalagin and meropenem, and multiple parameters were analyzed, including hematological indices, bacterial burden, lymphoid organ cellularity, cytokine profiles (IL-2, IL-4, IL-6, IL-10, IL-17, IFN-γ, TNF-α), nitric oxide (NO) production, and organ histopathology. Results: Punicalagin enhanced NO-mediated antimicrobial responses, increased neutrophil migration, preserved lymphoid cellularity, and significantly reduced the bacterial translocation. Combined therapy with meropenem improved systemic IL-10 levels and mitigated histopathological damage in the liver, kidney, intestine, and lung. Importantly, punicalagin did not induce thrombocytopenia. Conclusions: These results support the potential of punicalagin as an adjunctive agent to antibiotics for sepsis treatment, offering both antimicrobial and immunoregulatory benefits. Further studies are required to explore its clinical applicability. Full article
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17 pages, 5923 KiB  
Article
Integrated Microbiome and Metabolomics Analysis Reveals Altered Aggressive Behaviors in Broiler Chickens Showing Different Tonic Immobility
by Jiang Gao, Xiaoxian Cheng, Xuanfu Wu, Cunzhi Zou, Bin He and Wenqiang Ma
Animals 2025, 15(4), 601; https://doi.org/10.3390/ani15040601 - 19 Feb 2025
Cited by 1 | Viewed by 699
Abstract
Tonic immobility (TI) serves as an indicator of innate stress response recovery in poultry. Broilers with different TI phenotypes exhibit varying levels of aggressive behavior, which can significantly impact their welfare. However, the influences of TI phenotypes on broiler aggression remain largely unexplored. [...] Read more.
Tonic immobility (TI) serves as an indicator of innate stress response recovery in poultry. Broilers with different TI phenotypes exhibit varying levels of aggressive behavior, which can significantly impact their welfare. However, the influences of TI phenotypes on broiler aggression remain largely unexplored. In this study, broiler chickens were stratified into two distinct phenotypic groups based on the TI duration: short TI (STI) and long TI (LTI). The impacts of TI phenotypes on broiler aggression were investigated by analyzing cecal intestinal morphology, cecal bacteria, plasma metabolites, and corticosterone levels. Compared to LTI broilers, STI broilers showed significantly reduced plasma corticosterone (CORT) levels (p < 0.05) and a decreased frequency of aggressive behaviors, including dominant and subdominant types (p < 0.01). Histological analysis revealed that STI broilers have an increased duodenal villus height and villus-height-to-crypt-depth ratio (p < 0.01), a decreased jejunal crypt depth with an increased villus-height-to-crypt-depth ratio (p < 0.01), and a reduced ileal crypt depth and villus height (p < 0.01) compared to LTI broilers. 16S rDNA sequencing and Linear discriminant analysis effect size (LefSe) identified differential cecal bacterial abundance, notably in the genus cc115 belonging to Firmicutes. Specific microbiota in LTI broilers exhibited significant positive correlations with aggressive behavior and plasma corticosterone, while those in STI broilers showed significant negative correlations. Untargeted plasma metabolomics revealed 21 downregulated and 17 upregulated metabolites between TI phenotypes. Correlation analysis showed that the genus cc115 and 10 plasma metabolites were positively correlated with aggressive behavior, whereas 8 metabolites were negatively correlated. LTI broilers have higher plasma corticosterone content and more intense aggressive behavior than STI broilers. The distinct behavioral and physiological profiles observed in broilers with different TI phenotypes are strongly correlated with their specific gut microbiota and differential plasma metabolite profiles. The identified gut microbial signatures serve as key biomarkers for regulating aggressive behavior in broilers, while the differential plasma metabolites represent potential early indicators for detecting stress and behavioral issues in poultry farming. Full article
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15 pages, 5577 KiB  
Article
Shielding the Gut: Ghrelin and Ferrostatin-1’s Protective Role Against Sepsis-Induced Intestinal Ferroptosis
by Qiliang Hou, Zhimin Dou, Lei Zhu and Bin Li
Biomedicines 2025, 13(1), 77; https://doi.org/10.3390/biomedicines13010077 - 31 Dec 2024
Cited by 1 | Viewed by 1157
Abstract
Objective: This study investigates the therapeutic efficacy of ghrelin in alleviating sepsis-induced intestinal damage, focusing on its potential to inhibit ferroptosis and protect intestinal barrier integrity. Methods: This study evaluates the therapeutic efficacy of intraperitoneal ghrelin (80 μg/kg) and Ferrostatin-1 (5 mg/kg) using [...] Read more.
Objective: This study investigates the therapeutic efficacy of ghrelin in alleviating sepsis-induced intestinal damage, focusing on its potential to inhibit ferroptosis and protect intestinal barrier integrity. Methods: This study evaluates the therapeutic efficacy of intraperitoneal ghrelin (80 μg/kg) and Ferrostatin-1 (5 mg/kg) using a cecal ligation and puncture (CLP) model in C57BL/6 mice to determine their potential in alleviating sepsis-induced intestinal damage. The investigation focuses on the impacts of ghrelin and Ferrostatin-1 on bacterial load, intestinal morphology, systemic inflammation, oxidative stress, and ferroptosis markers. Our comprehensive methodology encompasses histopathological evaluations, cytokine profiling, oxidative stress assays, and detailed analyses of ferroptosis indicators to thoroughly assess the interventions’ efficacy. Results: Treatment with ghrelin significantly reduced bacterial proliferation, mitigated intestinal damage, and decreased systemic inflammation. Comparable outcomes were observed with Fer-1 treatment. Both interventions restored intestinal barrier functions, modulated inflammatory responses, and attenuated oxidative stress, indicating a suppression of the ferroptosis pathway. Conclusion: Ghrelin exhibits a protective role in sepsis-induced intestinal injury, likely through the inhibition of ferroptosis. This mechanism underscores ghrelin’s therapeutic potential in sepsis management, suggesting avenues for further clinical exploration. Full article
(This article belongs to the Section Cell Biology and Pathology)
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13 pages, 4220 KiB  
Article
Ingesting Stellera chamaejasme Significantly Impacts the Gastrointestinal Tract Bacterial Community and Diversity in Plateau Zokors (Eospalax baileyi)
by Jialong Guo, Haijing Wang, Feng Jiang and Daoxin Liu
Microorganisms 2024, 12(11), 2182; https://doi.org/10.3390/microorganisms12112182 - 30 Oct 2024
Viewed by 1159
Abstract
Intestinal bacteria are considered the “second genome” of the host, playing a crucial physiological role in assisting the host in degrading plant secondary compounds, nutrient absorption, immune regulation, and other aspects. To explore the effects of Stellera chamaejasme on the bacterial community of [...] Read more.
Intestinal bacteria are considered the “second genome” of the host, playing a crucial physiological role in assisting the host in degrading plant secondary compounds, nutrient absorption, immune regulation, and other aspects. To explore the effects of Stellera chamaejasme on the bacterial community of the gastrointestinal tract of plateau zokor, this study uses the 16S rRNA gene high-throughput sequencing technology, and the biodiversity and the community structure of gut bacteria in different gastrointestinal tract segments (the stomach and cecum) of plateau zokors. The results showed that at the phylum level, the dominant flora in the stomach and cecum of plateau zokors before and after ingesting Stellera chamaejasme were Firmicutes and Bacteroidetes. In plateau zokors that ingested Stellera chamaejasme, the relative abundance of Firmicutes in the stomach and cecum decreased, the relative abundance of Bacteroidetes increased, and the ratio of Firmicutes to Bacteroidetes decreased. After plateau zokors ingested Stellera chamaejasme, the ACE index demonstrated a significant reduction in the richness of the stomach bacterial community, while cecal bacterial community richness showed no significant change. Stellera chamaejasme exhibits significantly different effects on the bacterial communities in different segments of the gastrointestinal tract. Beta diversity analysis revealed that, after plateau zokors ingested Stellera chamaejasme, there were notable distinctions in the bacterial communities within both the stomach and cecum, alongside a marked reduction in the variability of the intestinal bacterial profiles across individuals. The results show that ingesting Stellera chamaejasme has a significant impact on the composition and structure of the gastrointestinal tract bacterial community in plateau zokors. Full article
(This article belongs to the Special Issue Gut Microbiota: Metagenomics to Study Ecology)
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17 pages, 310 KiB  
Article
Effects of Moringa oleifera Leaf Powder on the Growth Performance, Meat Quality, Blood Parameters, and Cecal Bacteria of Broilers
by Md G. Akib, Al Rifat, Chondhon Bormon, Amitush Dutta, Mohammad Shamsul Ataher, Mahmoud Azzam, Mohammed Hamdy Farouk, Razib Das, Md Abul Kalam Azad and Shad Mahfuz
Vet. Sci. 2024, 11(8), 374; https://doi.org/10.3390/vetsci11080374 - 14 Aug 2024
Cited by 4 | Viewed by 4925
Abstract
The effect of dietary inclusion of Moringa oleifera leaf powder (MLP) on the growth, meat quality, carcass characteristics, hematobiochemical profile, and cecal bacteria of broiler chicken was investigated in this research trial. In this study, 192-day-old Arbor Acre broiler chicks were assigned in [...] Read more.
The effect of dietary inclusion of Moringa oleifera leaf powder (MLP) on the growth, meat quality, carcass characteristics, hematobiochemical profile, and cecal bacteria of broiler chicken was investigated in this research trial. In this study, 192-day-old Arbor Acre broiler chicks were assigned in a completely randomized design to three groups: control, antibiotic, and MLP. A standard basal diet was given to the control group, while the antibiotic group received 75 mg/kg chlortetracycline, and the MLP group received 100 mg/kg M. oleifera leaf powder supplemented basal diet. Each group was further divided into eight replicates consisting of eight birds each, and the trial ran for 35 days. Among the groups, the MLP-fed broilers achieved the highest final body weight (FBW), average daily gain (ADG), and average daily feed intake (ADFI). Notably, the FCR for the whole experimental period was lower in the MLP group, indicating a more efficient use of feed for growth. Supplementation of MLP with basal diet significantly increased (p < 0.05) the weight of thighs and drumsticks relative to live weight %, while the spleen and abdominal fat weight (% of live weight) were significantly decreased (p < 0.05). Adding MLP to the diet improved the meat quality of broilers, as indicated by the highest pH of meat at 45 min and the lowest cooking loss (%) observed in this group. MLP exhibited hypocholesterolemic and hypolipidemic effects, with the lowest total cholesterol and triglyceride levels compared to non-supplemented groups. The hematological profile revealed that the MLP group exhibited the highest RBC count and Hb level, while also showing the lowest H/L ratio. Moringa supplementation significantly (p < 0.05) modulated the cecal bacterial population, reducing pathogenic E. coli and Shigella spp. while increasing beneficial Lactobacillus spp. and the total aerobic plate count (TAPC). In conclusion, Moringa oleifera leaf powder (MLP) can be used as a natural feed supplement for promoting the growth, meat quality, healthy blood, and sound health of broilers. Full article
17 pages, 3096 KiB  
Article
Large-Scale Field Trials of an Eimeria Vaccine Induce Positive Effects on the Production Index of Broilers
by Binh T. Nguyen, Dongjean Yim, Rochelle A. Flores, Seung Yun Lee, Woo H. Kim, Seung-Hwan Jung, Sangkyu Kim and Wongi Min
Vaccines 2024, 12(7), 800; https://doi.org/10.3390/vaccines12070800 - 19 Jul 2024
Cited by 3 | Viewed by 1764
Abstract
Live coccidiosis vaccines have mainly been used to reduce Eimeria species infection, which is considered the most economically important disease in the poultry industry. Evaluation data on vaccine effectiveness through large-scale field experiments are lacking, especially in broilers. Thus, the effectiveness of a [...] Read more.
Live coccidiosis vaccines have mainly been used to reduce Eimeria species infection, which is considered the most economically important disease in the poultry industry. Evaluation data on vaccine effectiveness through large-scale field experiments are lacking, especially in broilers. Thus, the effectiveness of a commercial coccidiosis vaccine was evaluated in approximately 900,000 chicks reared on three open-broiler farms where coccidiosis is prevalent. The vaccine’s effectiveness after vaccination of 1-day-old chicks was monitored using three parameters (lesion score, fecal oocyst shedding, and production index, PI) in nine trials performed three times on each farm. Lesion scores were confirmed in three different areas of the intestine because the vaccine contained four Eimeria species. The average lesion scores were 0.36 to 0.64 in the duodenal region, 0.30 to 0.39 in the jejuno-ileal region, and 0.18 to 0.39 in the cecal region. The average fecal oocyst shedding rate ranged from 19,766 to 100,100 oocysts per gram, showing large variations depending on farms and buildings within the farm. Compared with the PI of the previous 9–10 trials on each farm, the PI increased by 2.45 to 23.55. Because of the potential for perturbation of the fecal microbiota by live coccidiosis vaccines, the fecal microbiota was investigated using 16S rRNA microbial profiling. Although the β-diversity was significantly different in distribution and relative abundance among farms (PERMANOVA, pseudo-F = 4.863, p = 0.009), a Kyoto Encyclopedia of Genes and Genomes pathway analysis found no significant bacterial invasion of the epithelial cell pathway across farms. This large-scale field trial of a live Eimeria vaccine indicates that coccidiosis vaccines can have meaningful effects on the poultry industry and could be used as an alternative to the prophylactic use of anticoccidial drugs under field conditions. Full article
(This article belongs to the Special Issue Vaccines for Chicken)
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17 pages, 536 KiB  
Article
Effects of Dietary Supplementations of Vitamin C, Organic Selenium, Betaine, and Pomegranate Peel on Alleviating the Effect of Heat Stress on Growing Rabbits
by Salma H. Abu Hafsa, Gerardo Centoducati, Ayman A. Hassan, Aristide Maggiolino, Mona M. M. Y. Elghandour and Abdelfattah Z. M. Salem
Animals 2024, 14(6), 950; https://doi.org/10.3390/ani14060950 - 19 Mar 2024
Cited by 10 | Viewed by 3277
Abstract
The aim of this study was to investigate the biological activity and sustainable biorefinery development of vitamin C, organic selenium, betaine, and pomegranate peel on the performance, cecal fermentation, and antioxidant status of growing rabbits to alleviate the negative impacts of heat stress. [...] Read more.
The aim of this study was to investigate the biological activity and sustainable biorefinery development of vitamin C, organic selenium, betaine, and pomegranate peel on the performance, cecal fermentation, and antioxidant status of growing rabbits to alleviate the negative impacts of heat stress. A total of 105 male rabbits at 35 days old with an average weight of 752.55 ± 27.56 g were randomly assigned to five groups (21 rabbits in each). The experimental dietary groups included a control group fed a basal diet without additives (control group) and four treated groups, A, B, C, and D, fed a basal diet supplemented with either a 1000 mg vitamin C/kg diet, a 25 mg organic selenium/kg diet, a 1000 mg betaine/kg diet, or a 20 g pomegranate peel/kg diet, respectively. No negative group (not heat-stressed) was included in the trial. Rabbits given A, B, C, and D supplements showed a significant increase (p < 0.05) in growth performance, nutrient digestion, concentration of total volatile fatty acids (VFA), acetic, and propionic acids, and total bacterial count, and a significant decrease (p < 0.05) in NH3-N concentration, Enterococcus, coliforms, and E. coli counts in the cecum of rabbits. Total protein, albumin, globulin, superoxide dismutase (SOD), catalase (CAT), reduced glutathione (GSH), and glutathione peroxidase (GPx) were significantly (p < 0.05) higher in groups supplemented with A, B, C, and D supplements compared to those in the control group. Total cholesterol, triglycerides, creatinine, urea, and malondialdehyde (MDA) were significantly (p < 0.05) lower in groups supplemented with A, B, C, and D supplements compared to those in the control group. In conclusion, the finding showed that the supplementation of vitamin C, organic selenium, betaine, and pomegranate peel played a significant role in alleviating heat stress and had a further beneficial impact on rabbit performance, cecal fermentation and microbiota, and antioxidant status. However, betaine supplementation had a superior positive effect on the nutritional and physiological profile of heat-stressed rabbits. Full article
(This article belongs to the Special Issue Feed Additives, Performance and Welfare in Domestic Animals)
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20 pages, 3785 KiB  
Article
Partially Alternative Feeding with Fermented Distillers’ Grains Modulates Gastrointestinal Flora and Metabolic Profile in Guanling Cattle
by Guangxia He, Chao Chen, Shihui Mei, Ze Chen, Rong Zhang, Tiantian Zhang, Duhan Xu, Mingming Zhu, Xiaofen Luo, Chengrong Zeng, Bijun Zhou, Kaigong Wang, Erpeng Zhu and Zhentao Cheng
Animals 2023, 13(22), 3437; https://doi.org/10.3390/ani13223437 - 7 Nov 2023
Cited by 9 | Viewed by 2229
Abstract
Fermented distillers’ grains (FDG) are commonly used to enhance the health and metabolic processes of livestock and poultry by regulating the composition and activity of the intestinal microbiota. Nevertheless, there is a scarcity of research on the effects of the FDG diet on [...] Read more.
Fermented distillers’ grains (FDG) are commonly used to enhance the health and metabolic processes of livestock and poultry by regulating the composition and activity of the intestinal microbiota. Nevertheless, there is a scarcity of research on the effects of the FDG diet on the gastrointestinal microbiota and its metabolites in cattle. This study examines the impact of FDG dietary supplements on the gastrointestinal flora and metabolic profile of Guanling cattle. Eighteen cattle were randomly assigned to three treatment groups with six replicates per group. The treatments included a basal diet (BD), a 15% concentrate replaced by FDG (15% FDG) in the basal diet, and a 30% concentrate replaced by FDG (30% FDG) in the basal diet. Each group was fed for a duration of 60 days. At the conclusion of the experimental period, three cattle were randomly chosen from each group for slaughter and the microbial community structure and metabolic mapping of their abomasal and cecal contents were analyzed, utilizing 16S rDNA sequencing and LC-MS technology, respectively. At the phylum level, there was a significant increase in Bacteroidetes in both the abomasum and cecum for the 30%FDG group (p < 0.05). Additionally, there was a significant reduction in potential pathogenic bacteria such as Spirochetes and Proteobacteria for both the 15%FDG and 30%FDG groups (p < 0.05). At the genus level, there was a significant increase (p < 0.05) in Ruminococcaceae_UCG-010, Prevotellaceae_UCG-001, and Ruminococcaceae_UCG-005 fiber degradation bacteria. Non-target metabolomics analysis indicated that the FDG diet significantly impacted primary bile acid biosynthesis, bile secretion, choline metabolism in cancer, and other metabolic pathways (p < 0.05). There is a noteworthy correlation between the diverse bacterial genera and metabolites found in the abomasal and cecal contents of Guanling cattle, as demonstrated by correlation analysis. In conclusion, our findings suggest that partially substituting FDG for conventional feed leads to beneficial effects on both the structure of the gastrointestinal microbial community and the metabolism of its contents in Guanling cattle. These findings offer a scientific point of reference for the further use of FDG as a cattle feed resource. Full article
(This article belongs to the Section Cattle)
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14 pages, 309 KiB  
Article
Fish and Black Soldier Fly Meals as Partial Replacements for Soybean Meal Can Affect Sustainability of Productive Performance, Blood Constituents, Gut Microbiota, and Nutrient Excretion of Broiler Chickens
by Youssef A. Attia, Fulvia Bovera, Khalid A. Asiry, Shatha Alqurashi and Majed S. Alrefaei
Animals 2023, 13(17), 2759; https://doi.org/10.3390/ani13172759 - 30 Aug 2023
Cited by 13 | Viewed by 3540
Abstract
One hundred and twenty, one-day-old male broiler chicks were used to investigate the effects of supplementation with different dietary protein sources on their performance and immune systems. Chicks were randomly divided into four equal experimental groups (six replicates, each of five chicks). The [...] Read more.
One hundred and twenty, one-day-old male broiler chicks were used to investigate the effects of supplementation with different dietary protein sources on their performance and immune systems. Chicks were randomly divided into four equal experimental groups (six replicates, each of five chicks). The first group served as a control and was fed a standard corn–soybean meal diet. The second, third, and fourth groups were fed diets in which the soybean meal (SBM) was partly replaced by fish meal (FM), black soldier fly larvae (BSFL), and black soldier fly prepupae (BSFP), respectively. Throughout 1–14 and 15–42 days of age, FM, BSFL, and BSFP were added at 3 and 5%, respectively. The feed conversion ratio (FCR) of the FM group was the best among the tested groups. Feeding BSFP decreased final body weight (BW), BW gain, feed intake, and impaired the FCR compared to the other treatments for the entire experimental period. The BSFP group had significantly lower cecal Salmonella counts compared to the control group and lower total bacterial counts compared to the other groups except for BSFL. BSFL can be fed to broiler chickens at 3% during the starter period and 5% during the grower-finisher periods without negative influences on growth performance, red blood cell characteristics, blood lipid profiles, and nutrient excretion, while BSFP can improve the chickens’ gut ecosystem. Full article
(This article belongs to the Section Poultry)
25 pages, 4022 KiB  
Article
Development of a Chicken Gastrointestinal Tract (GIT) Simulation Model: Impact of Cecal Inoculum Storage Preservation Conditions
by Nelson Mota de Carvalho, Célia Maria Costa, Cláudia Castro, Mayra Anton Dib Saleh, Manuela Estevez Pintado, Diana Luazi Oliveira and Ana Raquel Madureira
Appl. Microbiol. 2023, 3(3), 968-992; https://doi.org/10.3390/applmicrobiol3030066 - 22 Aug 2023
Cited by 2 | Viewed by 4072
Abstract
A chicken gastrointestinal tract (GIT) simulation model was developed to help predict the potential effects of feed additives supplementation on chicken’ microbiota. The chemical and enzymatic conditions for oral, gastric, intestinal, and cecum fermentation phases were designed to closely resemble the chicken GIT [...] Read more.
A chicken gastrointestinal tract (GIT) simulation model was developed to help predict the potential effects of feed additives supplementation on chicken’ microbiota. The chemical and enzymatic conditions for oral, gastric, intestinal, and cecum fermentation phases were designed to closely resemble the chicken GIT conditions. For cecum fermentation, the inoculum was obtained from the cecal contents of 18 38-day broiler chickens. The impact of inoculum preservation on bacteria viability was assessed by comparing two methods of preservation with fresh inoculum: (1) 5% dimethyl sulfoxide (DMSO) at −80 °C and (2) 30% glycerol at −20 °C. The fermentation with fresh and frozen (DMSO method) inoculums was performed and compared using standard chicken feed (SCF) and SCF with 1% fructooligosaccharides (FOS), and inoculum control (IC) condition without feed matrix was used as a baseline. Inoculum’s viability was assessed throughout 90 days of storage by culture media platting, while bacterial growth and metabolites production during fermentation was evaluated by quantitative polymerase chain reaction (qPCR), high-performance liquid chromatography (HPLC), and total ammonia nitrogen quantification. The DMSO method was shown to be the most suitable for cecal inoculum storage. Higher growth of beneficial cecal bacteria for fresh inoculum was observed in SCF while for frozen inoculum, was the SCF + FOS condition. Also, frozen inoculum had lower activity of butyrate producers and proteolytic bacteria, showing different fermentation profiles. The GIT model developed showed to be useful to test the effect of feed additives supplementation. Full article
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16 pages, 14680 KiB  
Article
The Inherited Intestinal Microbiota from Myeloid-Specific ZIP8KO Mice Impairs Pulmonary Host Defense against Pneumococcal Pneumonia
by Derrick R. Samuelson, Deandra R. Smith, Kelly C. Cunningham, Sabah Haq, Daniel N. Villageliú, Christi M. Ellis, Niaz Bahar Chowdhury, Amanda E. Ramer-Tait, Jeffrey D. Price and Daren L. Knoell
Pathogens 2023, 12(5), 639; https://doi.org/10.3390/pathogens12050639 - 25 Apr 2023
Cited by 1 | Viewed by 2222
Abstract
Intestinal dysbiosis increases susceptibility to infection through the alteration of metabolic profiles, which increases morbidity. Zinc (Zn) homeostasis in mammals is tightly regulated by 24 Zn transporters. ZIP8 is unique in that it is required by myeloid cells to maintain proper host defense [...] Read more.
Intestinal dysbiosis increases susceptibility to infection through the alteration of metabolic profiles, which increases morbidity. Zinc (Zn) homeostasis in mammals is tightly regulated by 24 Zn transporters. ZIP8 is unique in that it is required by myeloid cells to maintain proper host defense against bacterial pneumonia. In addition, a frequently occurring ZIP8 defective variant (SLC39A8 rs13107325) is strongly associated with inflammation-based disorders and bacterial infection. In this study, we developed a novel model to study the effects of ZIP8-mediated intestinal dysbiosis on pulmonary host defense independent of the genetic effects. Cecal microbial communities from a myeloid-specific Zip8 knockout mouse model were transplanted into germ-free mice. Conventionalized ZIP8KO-microbiota mice were then bred to produce F1 and F2 generations of ZIP8KO-microbiota mice. F1 ZIP8KO-microbiota mice were also infected with S. pneumoniae, and pulmonary host defense was assessed. Strikingly, the instillation of pneumococcus into the lung of F1 ZIP8KO-microbiota mice resulted in a significant increase in weight loss, inflammation, and mortality when compared to F1 wild-type (WT)-microbiota recipients. Similar defects in pulmonary host defense were observed in both genders, although consistently greater in females. From these results, we conclude that myeloid Zn homeostasis is not only critical for myeloid function but also plays a significant role in the maintenance and control of gut microbiota composition. Further, these data demonstrate that the intestinal microbiota, independent of host genetics, play a critical role in governing host defense in the lung against infection. Finally, these data strongly support future microbiome-based interventional studies, given the high incidence of zinc deficiency and the rs13107325 allele in humans. Full article
(This article belongs to the Special Issue The Pathogenesis of Bacterial Lung Infections)
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23 pages, 8510 KiB  
Article
Gene Co-Expression Network Analysis Reveals the Hub Genes and Key Pathways Associated with Resistance to Salmonella Enteritidis Colonization in Chicken
by Qiao Wang, Mamadou Thiam, Astrid Lissette Barreto Sánchez, Zixuan Wang, Jin Zhang, Qinghe Li, Jie Wen and Guiping Zhao
Int. J. Mol. Sci. 2023, 24(5), 4824; https://doi.org/10.3390/ijms24054824 - 2 Mar 2023
Cited by 7 | Viewed by 3270
Abstract
Salmonella negatively impacts the poultry industry and threatens animals’ and humans’ health. The gastrointestinal microbiota and its metabolites can modulate the host’s physiology and immune system. Recent research demonstrated the role of commensal bacteria and short-chain fatty acids (SCFAs) in developing resistance to [...] Read more.
Salmonella negatively impacts the poultry industry and threatens animals’ and humans’ health. The gastrointestinal microbiota and its metabolites can modulate the host’s physiology and immune system. Recent research demonstrated the role of commensal bacteria and short-chain fatty acids (SCFAs) in developing resistance to Salmonella infection and colonization. However, the complex interactions among chicken, Salmonella, host–microbiome, and microbial metabolites remain unelucidated. Therefore, this study aimed to explore these complex interactions by identifying the driver and hub genes highly correlated with factors that confer resistance to Salmonella. Differential gene expression (DEGs) and dynamic developmental genes (DDGs) analyses and weighted gene co-expression network analysis (WGCNA) were performed using transcriptome data from the cecum of Salmonella Enteritidis-infected chicken at 7 and 21 days after infection. Furthermore, we identified the driver and hub genes associated with important traits such as the heterophil/lymphocyte (H/L) ratio, body weight post-infection, bacterial load, propionate and valerate cecal contents, and Firmicutes, Bacteroidetes, and Proteobacteria cecal relative abundance. Among the multiple genes detected in this study, EXFABP, S100A9/12, CEMIP, FKBP5, MAVS, FAM168B, HESX1, EMC6, and others were found as potential candidate gene and transcript (co-) factors for resistance to Salmonella infection. In addition, we found that the PPAR and oxidative phosphorylation (OXPHOS) metabolic pathways were also involved in the host’s immune response/defense against Salmonella colonization at the earlier and later stage post-infection, respectively. This study provides a valuable resource of transcriptome profiles from chicken cecum at the earlier and later stage post-infection and mechanistic understanding of the complex interactions among chicken, Salmonella, host–microbiome, and associated metabolites. Full article
(This article belongs to the Special Issue Molecular Genetics and Breeding Mechanisms in Domestics Animals)
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21 pages, 3636 KiB  
Article
Effects of Microencapsulated Probiotics on Performance, Organ Development, Diarrhoea Incidences, Blood Parameters, Intestinal Histomorphology and Microflora in Weaning Piglets
by Nicoleta Aurelia Lefter, Mihaela Hăbeanu, Anca Gheorghe, Mihaela Dumitru, Claudiu Gal and Petru Alexandru Vlaicu
Agriculture 2023, 13(1), 39; https://doi.org/10.3390/agriculture13010039 - 23 Dec 2022
Cited by 6 | Viewed by 2711
Abstract
The study aimed to assess the effects of the dietary supplementation of microencapsulated L. acidophilus and L. plantarum and their combination on the growth performance, organ development, diarrhoea incidences, blood profiles, intestinal histomorphology and microflora in weaned piglets. For that, 160 piglets with [...] Read more.
The study aimed to assess the effects of the dietary supplementation of microencapsulated L. acidophilus and L. plantarum and their combination on the growth performance, organ development, diarrhoea incidences, blood profiles, intestinal histomorphology and microflora in weaned piglets. For that, 160 piglets with an average body weight (BW) of 8.52 ± 0.15 kg were divided into four groups (40 piglets/group) and allotted to one of the four dietary treatments as follows: a basal diet (C diet) or a basal diet containing 1 × 108 CFU/g of L. acidophilus (LA diet), or a diet containing 3 × 108 CFU/g of L. plantarum (LP diet) and a diet with the combination of both bacterial strains (LA + LP diet) for 21 days. On day 14, probiotics significantly increased ADFI, while FCR was higher in the LA and LP groups than the C and LA + LP groups. No effects (p > 0.05) on visceral organs weight, intestinal pH and biochemical parameters among treatments were noticed. Treatments significantly lowered diarrhoea incidence compared to control. Villus width was greater (p < 0.05) in all small intestinal segments in piglets fed probiotics. In the jejunum and ileum villus length, crypt length, and total villi length were higher (p < 0.05), particularly in the LA + LP group. The probiotics, particularly the LA + LP group, modulated the cecal, jejunum and ileum microbial community structure and increased (p < 0.05) the amount of Lactobacillus spp. while decreasing the populations of Escherichia coli and Staphylococcus. Our results indicated that dietary supplementation of microencapsulated probiotics, particularly the combination of L. plantarum and L acidophilus strains, maintained growth performance, lowered diarrhoea incidence and beneficially altered the intestinal architecture and microbial populations of weaned piglets. Full article
(This article belongs to the Special Issue Feeding Strategies and Nutritional Quality of Animal Products)
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