Search Results (201)

A study was conducted to examine the effects of the spray application of nine antifungal products, including microbial-derived fungicides, plant-derived fungicides, and chemical fungicides, on the grass Achnatherum inebrians that was either host to Epichloë gansuensis (E+) or E. gansuensis-free (E−) and that was exposed to Blumeria graminis, the fungal pathogen causing powdery mildew. The Epichloë endophyte is a seed-borne mutualistic biotrophic fungus whose growth is fully synchronized with the host grass. Bl. graminis is a biotrophic pathogen that continually infects leaves and stems via conidia, the formation of appressoria, leading to the presence of haustoria in epidermal cells. Prior to fungicide application, the presence of endophytes significantly increased the resistance of A. inebrians to powdery mildew and was able to increase the chlorophyll content. However, the positive effects of the Epichloë endophyte on the plant were suppressed with the use of some fungicides and the increase in the number of sprays, but the reciprocal relationship between the Epichloë endophyte and the plant was not significantly disrupted. Full article

Blackleg caused by a hemi-biotrophic fungus Plenodomus lingam (syn. Leptosphaeria maculans) poses a significant threat to global canola production. Changing climatic conditions further exacerbate the intensity and prevalence of blackleg epidemics. Shifts in temperature, humidity, and precipitation patterns can enhance pathogen virulence and disease spread. This review synthesizes the knowledge on integrated disease management (IDM) approaches for blackleg, including crop rotation, resistant cultivars, and chemical and biological controls, with an emphasis on advanced strategies such as disease forecasting models, remote sensing, and climate-adapted breeding. Notably, bibliometric analysis reveals an increasing research focus on the intersection of blackleg, climate change, and sustainable disease management. However, critical research gaps remain, which include the lack of region-specific forecasting models, the limited availability of effective biological control agents, and underexplored socio-economic factors limiting farmer adoption of IDM. Additionally, the review identifies an urgent need for policy support and investment in breeding programs using emerging tools like AI-driven decision support systems, CRISPR/Cas9, and gene stacking to optimize fungicide use and resistance deployment. Overall, this review highlights the importance of coordinated, multidisciplinary efforts, integrating plant pathology, breeding, climate modeling, and socio-economic analysis to develop climate-resilient, locally adapted, and economically viable IDM strategies for sustainable canola production. Full article

Downy mildew is among the most destructive diseases affecting grape production worldwide. It severely restricts the advancement of the grape industry. The causative pathogen, Plasmopara viticola, is an obligate biotrophic oomycete. Since the disease was introduced to Europe via grape cuttings in the 1870s, downy mildew has spread globally, resulting in devastating economic consequences. We review the current knowledge on the causative agent of grape downy mildew, its pathogenic mechanism, and control measures. Finally, we provide recommendations for developing more cost-effective strategies involving resistance genes and biocontrol agents to control grape downy mildew. Full article

The water status of plants is affected by abiotic and biotic environmental factors and influences the growth and yield formation of crops. Assessment of the leaf water content (LWC) of grapevine using hyperspectral imaging (1000–2500 nm) was investigated under controlled conditions for its potential to study the effects of the downy mildew pathogen Plasmopara viticola on LWC of host tissue in compatible and incompatible interactions. A calibration curve was established for the relationship between LWC and the Normalized Difference Leaf Water Index (NDLWI₁₉₃₇) that uses spectral information from the water absorption band and NIR for normalization. LWC was significantly lower for abaxial than for adaxial leaf sides, irrespective of grapevine genotype and health status. Reflecting details of leaf anatomy, vascular tissue exhibited effects reverse to intercostal areas. Effects of P. viticola on LWC coincided with the appearance of first sporangia on the abaxial side and increased during further pathogenesis. Continuous water loss ultimately resulted in tissue death, which progressed from the margins into central leaf areas. Tiny spots of brown leaf tissue related to the reaction of partial resistant cultivars could be monitored only at the sensor’s highest spatial resolution. Proximal sensing enabled an unprecedented spatial resolution of leaf water content in host–pathogen interactions and confirmed that resistance reactions may produce a combination of dead and still-living cells that enable the development of biotrophic P. viticola. Full article

Utilizing high-throughput Illumina sequencing, we examined how small RNA (sRNA) profiles vary in Chinese white poplar (Populus tomentosa) across two pivotal infection stages by the rust fungus Melampsora larici-populina: the biotrophic growth phase (T02; 48 h post infection) and the urediniospore development and dispersal phase (T03; 168 h), both essential for plant colonization and prolonged biotrophic engagement. Far exceeding random expectations, siRNA clusters predominantly arose from transposon regions, with pseudogenes also contributing significantly, and infection-stage-specific variations were notably tied to these transposon-derived siRNAs. As the infection advanced, clusters of 24 nt siRNAs in transposon and intergenic regions exhibited pronounced abundance shifts. An analysis of targets indicated that Populus sRNAs potentially regulate 95% of Melampsora larici-populina genes, with pathogen effector genes showing heightened targeting by sRNAs during the biotrophic and urediniospore phases compared to controls, pointing to selective sRNA-target interactions. In contrast to conserved miRNAs across plant species, Populus-specific miRNAs displayed a markedly greater tendency to target NB-LRR genes. These observations collectively highlight the innovative roles of sRNAs in plant defense, their evolutionary roots, and their dynamic interplay with pathogen coevolution. Full article

Xanthomonas oryzae pv. oryzae (Xoo) is a biotrophic bacterial pathogen, which causes devastating bacterial blight disease worldwide. In this study, we thoroughly investigated the antimicrobial effect of the plant-derived extract chelerythrine against Xanthomonas oryzae pv. oryzae (Xoo) and elucidated its mechanism. Chelerythrine is a quaternary ammonium alkaloid with a 2,3,7,8-tetrasubstituted phenanthridine structure, extracted from plants, such as the whole plant of Chelidonium majus, and the roots, stems, and leaves of Macleaya cordata. We found that chelerythrine significantly inhibited the growth of Xoo at a concentration of 1.25 μg/mL. Further experiments revealed that chelerythrine interfered with the division and reproduction of the bacterium, leading to its filamentous growth. Additionally, it increased the permeability of Xoo cell membranes and effectively decreased the pathogenicity of Xoo, including the inhibition of extracellular polysaccharide production, cellulase secretion, and biofilm formation. Chelerythrine induced the accumulation of reactive oxygen species in the bacterium, triggering oxidative stress. The result showed that chelerythrine inhibited the formation of the Z-ring of Xoo, interfered with the synthesis of pyrimidine and purine nucleotides, inhibited DNA damage repair, and inhibited the formation of peptidoglycan and lipid-like A, thus interfering with cell membrane permeability, inhibiting carbohydrate metabolism and phosphorylation of sugars, reducing pathogenicity, and ultimately inhibiting bacterial growth and leading to the destruction or lysis of bacterial cells. Altogether, our results suggest that the antimicrobial effect of chelerythrine on Xoo exhibits multi-target properties. Additionally, its effective inhibitory concentration is low. These findings provide a crucial theoretical basis and guidance for the development of novel and efficient plant-derived antimicrobial compounds. Full article

Powdery mildew, a debilitating phytopathogen caused by biotrophic fungi within the order Erysiphales, endangers crop yields and global food security. Although traditional approaches have largely emphasized resistant cultivar development and chemical control, novel strategies are necessary to counter the advent of challenges, such as pathogen adaptation and climate change. This review fully discusses three principal areas of pathogen effector functions, e.g., the reactive oxygen species (ROS)-suppressive activity of CSEP087, and host susceptibility factors, like vesicle trafficking regulated by Mildew Locus O (MLO). It also briefly mentions the transcriptional regulation of resistance genes mediated by factors, like WRKY75 and NAC transcription factors, and post-transcriptional regulation via alternative splicing (As). In addition, this discussion discusses the intricate interactions among powdery mildew, host plants, and symbiotic microbiomes thereof, highlighting the mechanism through which powdery mildew infections disrupt the foliar microbiota balance. Lastly, we present a new biocontrol approach that entails synergistic microbial consortia, such as combinations of Bacillus and Trichoderma, to induce plant immunity while minimizing fungicide dependency. Through the study of combining knowledge of molecular pathogenesis with ecological resilience, this research offers useful insights towards climate-smart crop development and sustainable disease-management strategies in the context of microbiome engineering. Full article

Over the past few decades, peanut smut, caused by Thecaphora frezzii, has evolved from an emerging disease to a major global threat to peanut production. However, critical knowledge gaps persist regarding the anatomical pathways and host responses involved in infection, colonization, and sporulation. This study examines the pathosystem and histopathology of the biotrophic phase of T. frezzii in the susceptible cv. Granoleico. Anatomical analyses were conducted using light microscopy, confocal laser scanning, and scanning electron microscopy. Our findings reveal that T. frezzii enters the host through the peg rather than the ovary tip, invading during the R2-subterranean phase. Fruit colonization occurs at the R3-stage when the mechanical layer between the mesocarp and endocarp has not yet formed. Hyphal entry into the seed takes place between the R3-medium and R3-late pod stages via the funiculus, leading to extensive seed coat colonization without penetrating the embryo. Once inside, hyperplasia and hypertrophy are triggered, coinciding with teliospore formation. Teliosporogenesis disrupts nutrient translocation, arresting embryo development. The hyphae colonize tissues intracellularly, utilizing living cells of the vascular bundles and following the peanut’s photoassimilate transport pathway. Investigating these structural responses in phenotypically contrasting peanut genotypes may provide key insights into the anatomical barriers and defense mechanisms that determine disease susceptibility and resistance, ultimately contributing to the development of resistant cultivars. Full article

In vitro cultivation of arbuscular mycorrhizal fungi (AMF) is challenging due to their biotrophic symbiosis. The principal aim of this study was to demonstrate the effect of establishing in vitro dual cultures of arbuscular mycorrhizal fungi (AMF) inoculated on Swietenia macrophylla (mahogany) roots on plant growth. Furthermore, it was sought to demonstrate that plant colonization by Glomeromycota can be achieved with a replicable protocol. This study established monoxenic cultures of carrot (Daucus carota) Ri T-DNA ROC inoculated with Glomus sp. on two-compartment plates. At 75 days, hyphal growth reached 223.93 mm in the root compartment and 103.71 mm in the hyphal compartment. Spores produced in vitro measured 26.14 ± 1.70 µm, smaller than ex vitro spores (101.2 ± 4.22 µm). Rhodotorula mucilaginosa was isolated from cultures and appeared to stimulate hyphal growth and root–fungal contact. From these cultures, a dual culture of mahogany inoculated with Glomus sp. was established. No significant differences were observed between inoculated and non-inoculated plants in stem length, root length, root number, or leaf number at 30 days. Spore production ranged from 10,166 to 27,696 per plate, averaging 14,795 ± 3301, with hyphal lengths of 3655.46 ± 308.75 mm. Hyphal development included running and branching patterns, with solitary and clustered spores. Spore diameter averaged 27.68 ± 3.85 µm. Arbuscular colonization reached 41.49% at 30 days and 52.13% at 75 days, exceeding rates reported for other culture systems. Monoxenic cultures are a reliable, aseptic source of high-quality inoculum, supporting biofertilizer production and biotechnological applications. These methods provide valuable tools for studies involving AMF, such as those demonstrated with mahogany. Full article

Wheat powdery mildew disease caused by the obligate biotrophic fungal pathogen Blumeria graminis forma specialis tritici (B.g. tritici) seriously threatens global wheat production. Although improved powdery mildew resistance is an aim in wheat breeding, the regulatory mechanism underlying the wheat–B.g. tritici interaction remains poorly understood. In this study, the wheat chromatin remodeling protein TaSWP73 was identified as a negative regulator of post-penetration resistance against B.g. tritici. The transient overexpression of TaSWP73 attenuates wheat post-penetration resistance against B.g. tritici, while the silencing of TaSWP73 potentiates salicylic acid (SA) biosynthesis and activates post-penetration resistance against B.g. tritici. Importantly, chromatin in the promoter regions of TaSARD1, an activator gene of SA biosynthesis, is marked by high nucleosome occupancy in the TaSWP73-silenced wheat leaves. The silencing of TaSARD1 could suppress SA biosynthesis and attenuate post-penetration resistance against B.g. tritici with a lack of TaSWP73. In addition, TaICS1 was characterized as an essential component of wheat SA biosynthetic machinery. Potentiated SA biosynthesis and increased post-penetration resistance against B.g. tritici with a lack of TaSWP73 could be suppressed by the silencing of TaICS1 expression. These results collectively support the hypothesis that the wheat chromatin remodeling protein TaSWP73 contributes to the compatible wheat–powdery mildew interaction presumably via the suppression of the TaSARD1-TaICS1-SA pathway. Full article

Tar spot is a prevalent fungal disease characterized by shiny black spots on the leaves, stems, and fruits of various plants. It is typically caused by members of the family Phyllachoraceae, which consists of biotrophic and obligate plant parasitic fungi. During field investigations of tar spot fungi in Sichuan Province, China, 70 fungal samples associated with tar spots belonging to the family Poaceae were collected from 13 different locations. Through morphological studies and multi-locus phylogenetic analysis of combined ITS, SSU, and LSU datasets, the collected samples were classified into eight Phyllachora species. Among these, five were identified as new species (Phyllachora cylindricae, P. festucae, P. luzhouensis, P. palmifoliae, and P. wenchuanensis), and two represented new host records (P. chongzhouensis, P. panicicola). The new species are accompanied by descriptions and illustrations, while their characteristics are discussed in relation to comparable taxa. Additionally, P. yuanjiangensis is synonymized under P. xinpingensis. These findings enhance our understanding of tar spot fungi in Sichuan and, given that Phyllachora species are important pathogens of plants in the Poaceae family, establish a foundation for further research to better understand their potential impacts on agriculture and the local ecology. Full article

Some Pseudococcidae species interact with Coffea arabica’s roots and are associated with basidiomycete fungi. The fungal mycelium envelops the roots, which hinders their water and nutrient absorption. Combined with the feeding activity of the insects, this results in chlorosis, defoliation, and even plant death. Despite the significance of these interactions, they remain under-studied. To investigate the relationship between sporocarps found at the base of coffee trees, the cysts covering their roots, and the mealybug insects within them, samples of these three organisms—sporocarps, cysts, and mealybugs—were collected from 27 coffee plants across three farms in the departments of Norte de Santander and Quindío, Colombia. Fungi and cysts were identified by sequencing a nuclear gene region of the 28S large ribosomal subunit (28S rDNA) using the primers LSU200-F and LSU481-R. Fungal identification was further confirmed through classical taxonomy. Mealybugs were identified by sequencing a region of the mitochondrial gene Cytochrome C oxidase subunit I (COI) with CIF-CIR primers, corroborated through classical taxonomy. This study identified four fungal species associated with four species of Pseudococcidae. The fungus Phlebopus beniensis was associated with the mealybugs Pseudococcus elisae, Dysmicoccus neobrevipes, D. brevipes, and Pseudococcus nr. sociabilis. Phlebopus portentosus was linked to D. neobrevipes, while Xerophorus olivascens and Boletinellus rompelii were associated with other Pseudococcidae species. Additionally, the fungus Pseudolaccaria pachyphylla was found in coffee plants harboring mealybugs. These findings confirm the existence of specific associations between fungal species and mealybug insects that affect coffee plants. Full article

The biotrophic fungus Ustilago maydis, which causes smut disease in maize, secretes numerous proteins upon plant colonization. Some of them, termed effectors, help to evade plant defenses and manipulate cellular processes within the host. The function of many proteins specifically secreted during infection remains elusive. In this study, we biochemically characterized one such protein, UMAG_00027, that is highly expressed during plant infection. We show that UMAG_00027 is a secreted protein with a lectin-like fold and therefore term it Llp1 (lectin-like-protein 1). Llp1 decorated the fungal cell wall of cells grown in axenic culture or proliferating in planta, which is in agreement with its potential sugar-binding ability. We were unable to identify the precise sugar moieties that are bound by Llp1. CRISPR/Cas9-mediated deletion of llp1 reveals that the gene is not essential for fungal virulence. A structural search shows the presence of several other lectin-like proteins in U. maydis that might compensate for the function of Llp1 in ∆llp1 mutants. We therefore speculate that Llp1 is part of a family of lectin-like proteins with redundant functions. Full article

Albugo spp. are biotrophic parasites that cause white rust in Brassicaceae species, with significant crop losses. The generalist A. candida and the specialist A. laibachii infect Arabidopsis thaliana, and the pathosystem Albugo–Arabidopsis is a model for research in molecular genetics of plant–pathogen interactions. The occurrence of infection by Albugo in wild populations of Arabidopsis and data on the genetics of resistance-susceptibility are compatible with a hypothesis of host–pathogen coevolution. However, the negative impact of Albugo infection on Arabidopsis—a requirement for coevolution—has not been shown under field conditions. To address this question, we analysed the demography and the dynamics of Albugo infection in a wild Arabidopsis population in central Spain and measured plant fitness-related traits. Infection increased mortality by 50%, although lifespan, the fraction of plants that reproduced and seed production were reduced only in plants from the spring cohorts. Despite these negative effects, simulations of demographic dynamics showed that the population growth rate remained unaffected even at unrealistically high infection incidences. The lack of negative effects in autumn–winter cohorts suggests compensatory mechanisms in longer-lived plants. Results support the hypothesis of Albugo–Arabidopsis coevolution. Full article

Alternative splicing plays a crucial role in enhancing the protein diversity of eukaryotic genomes. However, alternative splicing has not been extensively studied in Botrytis cinerea. In this study, we examined the distribution and regulation of alternative splicing in the filamentous plant pathogenic fungus B. cinerea through strand-specific RNA sequencing at various stages of infection of Solanum lycopersicum. During infection (pre-penetration and biotrophic stage), most spliceosome genes had upregulated expression levels, indicating that splicing is altered at this stage. A total of 3308 genes underwent alternative splicing in B. cinerea, resulting in 7466 alternative splicing events, most of which were stage-specific. Transcripts generated through alternative splicing typically exhibit lower expression levels, coding potential, and functional domains, which are more prevalent during the hyphal phase compared to the infestation phase. To conclude, our research offers an extensive analysis of the genome-wide alternative splicing in B. cinerea throughout the infection process, acting as a significant resource for further clarifying the pathogenic mechanisms associated with B. cinerea. Full article