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Keywords = biofloc regulation

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21 pages, 3247 KB  
Article
A Biofloc Technology–Microbial Fuel Cell Coupled System for Enhanced Water Purification, Biofloc Regulation and Energy Recovery in Aquaculture
by Changwei Li, Zhenbo Ge, Yubing Lu and Limin Dai
Water 2026, 18(17), 2115; https://doi.org/10.3390/w18172115 - 27 Aug 2026
Abstract
Low organic carbon utilization efficiency is a core bottleneck restricting the application of biofloc technology (BFT) in intensive aquaculture, accompanied by limited total nitrogen removal, excessive biofloc accumulation, and underutilized chemical energy in organic wastes. To address this issue, this study develops a [...] Read more.
Low organic carbon utilization efficiency is a core bottleneck restricting the application of biofloc technology (BFT) in intensive aquaculture, accompanied by limited total nitrogen removal, excessive biofloc accumulation, and underutilized chemical energy in organic wastes. To address this issue, this study develops a novel biofloc technology–microbial fuel cell (BFT-MFC) coupled system that exploits surplus carbon sources in BFT as electron donors for bioelectricity generation while synergistically enhancing water purification performance. Compared with a conventional standalone BFT system, the coupled system was systematically evaluated in terms of water quality regulation, biofloc control and electricity generation performance. Results showed that the BFT-MFC system maintained relatively stable dissolved oxygen, pH, and temperature throughout the operation period. The ammonia nitrogen concentration remained relatively low in the BFT-MFC system, although a transient increase to approximately 0.35 mg/L occurred around day 20 before subsequently declining, and total nitrogen fluctuated within 4.29–12.87 mg/L, with substantially less accumulation than that observed in the BFT system, in contrast to the control group, where TN continuously rose to a peak of 23.55 mg/L. Total organic carbon was stabilized within a narrower range of 150–245 mg/L, compared with the wide fluctuation of 129.6–360 mg/L in the single BFT system. Additionally, the coupled system exhibited lower net biofloc accumulation based on floc-volume measurements, while maintaining effective water-quality regulation, and the integrated MFC delivered a maximum output voltage of 295.9 mV and a peak power density of 1716.8 mW m−2. Overall, the BFT-MFC coupled system integrates wastewater purification, biofloc regulation and energy recovery into a single unit, offering a promising sustainable strategy for industrial recirculating aquaculture. Full article
(This article belongs to the Special Issue Water Quality Management in Aquaculture Systems)
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19 pages, 2715 KB  
Review
Nitrogen Metabolism and Pathogen Feedback in Intensive Aquaculture: Reframing Ammonia Nitrogen as a Reactive Node
by Junfei Yu, Hongling Yang, Guohe Cai, Banghua Xia and Yunzhang Sun
Nitrogen 2026, 7(3), 84; https://doi.org/10.3390/nitrogen7030084 - 6 Aug 2026
Viewed by 307
Abstract
Feeds rich in protein are the dominant nitrogen input in intensive aquaculture, yet only part of dietary nitrogen is retained as animal biomass; the remainder enters water and sediment through uneaten feed, feces, dissolved wastes, mucus, sloughed tissue, and branchial ammonia excretion. This [...] Read more.
Feeds rich in protein are the dominant nitrogen input in intensive aquaculture, yet only part of dietary nitrogen is retained as animal biomass; the remainder enters water and sediment through uneaten feed, feces, dissolved wastes, mucus, sloughed tissue, and branchial ammonia excretion. This review aims to integrate nutritional, physiological, microbial, and disease-related evidence into an evidence-graded framework that positions ammonia nitrogen as a reactive node linking feed, host, water, sediment, and pathogen risk. To assemble this evidence, we conducted a structured narrative search of Web of Science and PubMed for records in English or Chinese published from 2006 to July 2026, with no restriction on publication type, and classified evidence as direct, indirect, or conceptual. The strongest evidence shows that dietary protein supply, amino acid balance, digestibility, and feeding regime regulate nitrogen retention and ammonia output, while microbial ammonification, nitrification, denitrification, dissimilatory nitrate reduction to ammonium, anammox, and assimilation determine whether reactive nitrogen is regenerated, retained, or removed. Experimental studies further show that ammonia impairs oxidative balance, mucosal barriers, immunity, and disease resistance. In contrast, evidence that pathogen infection quantitatively alters nitrogen retention, ammonia excretion, organic nitrogen release, and sedimentary ammonium regeneration remains limited and largely indirect. Accordingly, ammonia nitrogen is framed as a measurable reactive node rather than a unique source or a universally validated causal loop. Practical management should combine precision nutrition with water, biofloc, sediment, and disease surveillance, while future factorial studies and isotope tracer studies should quantify the complete nitrogen budget under pathogen challenge. Full article
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23 pages, 4989 KB  
Article
Effects of Fermented Longan Peel (Dimocarpus longan) on Growth Performance, Digestive Enzyme Activity, Intestinal Microstructure, Immune Response, and Gene Expression of Nile Tilapia (Oreochromis niloticus) Raised Under Biofloc System
by Supreya Wannavijit, Punika Ninyamasiri, Wanarsa Nonkrathok, Sudaporn Tongsiri, Phisit Seesuriyachan, Yuthana Phimolsiripol, Seyed Hossein Hoseinifar, Hien Van Doan and Marina Paolucci
Antioxidants 2026, 15(3), 394; https://doi.org/10.3390/antiox15030394 - 20 Mar 2026
Cited by 2 | Viewed by 2635
Abstract
The valorization of agricultural by-products as functional feed additives represents a promising strategy for sustainable aquaculture. This study evaluated the effects of dietary fermented longan peel (FLP), produced through enzymatic hydrolysis and Lactiplantibacillus plantarum fermentation, on growth performance, digestive physiology, gut morphology, innate [...] Read more.
The valorization of agricultural by-products as functional feed additives represents a promising strategy for sustainable aquaculture. This study evaluated the effects of dietary fermented longan peel (FLP), produced through enzymatic hydrolysis and Lactiplantibacillus plantarum fermentation, on growth performance, digestive physiology, gut morphology, innate immunity, and gene expression in Nile tilapia (Oreochromis niloticus) cultured under a biofloc system. Five experimental diets were formulated with graded FLP levels (0, 5, 10, 20, and 40 g kg−1) and fed to fish for eight weeks. Growth indices, including final weight, weight gain, and specific growth rate, improved significantly in fish receiving 20 g kg−1 FLP, following a strong quadratic response pattern. In vitro digestibility assays showed enhanced carbohydrate and protein digestibility, coinciding with increased intestinal amylase and protease activities. Histological analysis indicated that moderate FLP inclusion (10–20 g kg−1) promoted villus height, crypt depth, and epithelial organization. Innate immune parameters, including lysozyme, peroxidase, and alternative complement activity, were markedly elevated in serum and mucus, particularly at 20–40 g kg−1 after eight weeks. Gene expression profiling revealed significant up-regulation of growth-related (IGF-1, GH, NPY-α, Galanin), immune-related (TLR-7, TNF-α, NFκB), and antioxidant-related (hsp70, Keap-1, nrf-2, GST-α) genes in fish fed higher FLP levels, with responses plateauing beyond 20 g kg−1. Overall, FLP supplementation at 20 g kg−1 optimally enhanced growth, digestive efficiency, intestinal health, and innate immune status. These findings demonstrate the potential of fermented longan peel as a cost-effective, bioactive, and sustainable functional feed ingredient for tilapia and other warm-water aquaculture species. Full article
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12 pages, 1960 KB  
Article
Biofloc Technology Improves Harmful Nitrogen and Pathogens Control and Enhances Production Performance in Intensive Penaeus vannamei Culture Ponds with Reduced Water Exchange
by Shuangyin Li, Hongyu Liu, Yiji Lin, Yucheng Cao, Guoliang Wen, Haochang Su, Xiaojuan Hu, Yu Xu, Keng Yang and Wujie Xu
Fishes 2026, 11(3), 170; https://doi.org/10.3390/fishes11030170 - 15 Mar 2026
Cited by 2 | Viewed by 1356
Abstract
This 90-day trial evaluated the integrated benefits of biofloc technology (BFT) in lined ponds for intensive Penaeus vannamei culture, comparing it with a conventional water-exchange (WE) system. The BFT system maintained favorable water quality with a 68.4% reduction in cumulative water exchange. Concentrations [...] Read more.
This 90-day trial evaluated the integrated benefits of biofloc technology (BFT) in lined ponds for intensive Penaeus vannamei culture, comparing it with a conventional water-exchange (WE) system. The BFT system maintained favorable water quality with a 68.4% reduction in cumulative water exchange. Concentrations of toxic total ammonia–nitrogen (TAN) and nitrite–nitrogen (NO2-N) were better controlled, and total suspended solids (TSS) stabilized within a beneficial range (150–200 mg L−1). Microbial analysis indicated that BFT significantly increased total bacterial abundance in both culture water and shrimp hepatopancreas while reducing the total Vibrio-to-bacteria ratio in culture water to below 6%, significantly lower than in the WE system (>18%). Moreover, BFT significantly lowered the loads of specific pathogens, acute hepatopancreatic necrosis disease (AHPND)-causing Vibrio parahaemolyticus, and Enterocytozoon hepatopenaei (EHP) in both culture water and shrimp hepatopancreas. Regarding production performance, BFT significantly enhanced shrimp survival rate (82.4% vs. 71.5%), yield (3460 vs. 2948 kg pond−1), and water productivity (0.85 vs. 0.28 kg m−3), while lowering the feed conversion ratio (1.16 vs. 1.33). In conclusion, BFT achieves stable water quality, effective pathogen suppression, and enhanced production efficiency through microbial regulation, offering a viable water-saving, environmentally sound, and disease-resilient strategy for intensive P. vannamei culture. Full article
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21 pages, 557 KB  
Review
Integrated Application of Biofloc Technology in Aquaculture: A Review
by Changwei Li, Zhenbo Ge, Limin Dai and Yuan Chen
Water 2025, 17(14), 2107; https://doi.org/10.3390/w17142107 - 15 Jul 2025
Cited by 20 | Viewed by 9584
Abstract
Although biofloc technology (BFT) currently offers advantages such as improving aquaculture water quality, providing natural bait for cultured animals, and reducing pests and diseases, single BFT systems face technical bottlenecks, including the complex regulation of the carbon–nitrogen ratio, accumulation of suspended substances, and [...] Read more.
Although biofloc technology (BFT) currently offers advantages such as improving aquaculture water quality, providing natural bait for cultured animals, and reducing pests and diseases, single BFT systems face technical bottlenecks, including the complex regulation of the carbon–nitrogen ratio, accumulation of suspended substances, and acidification of the bottom sludge. Therefore, constructing a composite system with complementary functions through technology integration, such as with aquaponics, biofilm technology, integrated multi-trophic aquaculture systems (IMTAs), and recirculating aquaculture systems (RASs), has become the key path to breaking through industrialization barriers. This paper systematically reviews the action mechanisms, synergistic effects, and challenges of the four mainstream integration models incorporating BFT, providing theoretical support for the environmental–economic balance of intensive aquaculture. Full article
(This article belongs to the Special Issue Aquaculture Productivity and Environmental Sustainability)
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18 pages, 8998 KB  
Article
Synthesis and Evaluation of Aquatic Antimicrobial Peptides Derived from Marine Metagenomes Using a High-Throughput Screening Approach
by Kaiyue Wu, Guangxin Xu, Yin Tian, Guizhen Li, Zhiwei Yi and Xixiang Tang
Mar. Drugs 2025, 23(4), 178; https://doi.org/10.3390/md23040178 - 20 Apr 2025
Cited by 6 | Viewed by 3156
Abstract
Bacterial diseases cause high mortality and considerable losses in aquaculture. The rapid expansion of intensive aquaculture has further increased the risk of large-scale outbreaks. However, the emergence of drug-resistant bacteria, food safety concerns, and environmental regulations have severely limited the availability of antimicrobial. [...] Read more.
Bacterial diseases cause high mortality and considerable losses in aquaculture. The rapid expansion of intensive aquaculture has further increased the risk of large-scale outbreaks. However, the emergence of drug-resistant bacteria, food safety concerns, and environmental regulations have severely limited the availability of antimicrobial. Compared to traditional antibiotics, antimicrobial peptides (AMPs) offer broad spectrum activity, physicochemical stability, and lower resistance development. However, their low natural yield and high extraction costs along with the time-consuming and expensive nature of traditional drug discovery, pose a challenge. In this study, we applied a machine-learning macro-model to predict AMPs from three macrogenomes in the water column of South American white shrimp aquaculture ponds. The AMP content per megabase in the traditional earthen pond (TC1) was 1.8 times higher than in the biofloc pond (ZA1) and 63% higher than in the elevated pond (ZP11). A total of 1033 potential AMPs were predicted, including 6 anionic linear peptides, 616 cationic linear peptides, and 411 cationic cysteine-containing peptides. After screening based on structural, and physio-chemical properties, we selected 10 candidate peptides. Using a rapid high-throughput cell-free protein expression system, we identified nine peptides with antimicrobial activity against aquatic pathogens. Three were further validated through chemical synthesis. The three antimicrobial peptides (K-5, K-58, K-61) showed some inhibitory effects on all four pathogenic bacteria. The MIC of K-5 against Vibrio alginolyticus was 25 μM, the cell viability of the three peptides was higher than 70% at low concentrations (≤12.5 μM), and the hemolysis rate of K-5 and K-58 was lower than 5% at 200 μM. This study highlights the benefits of machine learning in AMP discovery, demonstrates the potential of cell-free protein synthesis systems for peptide screening, and provides an efficient method for high-throughput AMP identification for aquatic applications. Full article
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24 pages, 2030 KB  
Article
Factors That Limit the Adoption of Biofloc Technology in Aquaculture Production in Mexico
by Erick Arturo Betanzo-Torres, María de los Ángeles Piñar-Álvarez, Luis Carlos Sandoval-Herazo, Antonio Molina-Navarro, Isidro Rodríguez-Montoro and Raymundo Humberto González-Moreno
Water 2020, 12(10), 2775; https://doi.org/10.3390/w12102775 - 5 Oct 2020
Cited by 22 | Viewed by 9653
Abstract
Aquaculture uses large volumes of water, which is generally discharged without treatment, possibly causing scarcity and contamination. A sustainable aquaculture option is biofloc technology (BFT), which recycles food residues and toxic organic and inorganic compounds from the system through microorganisms, avoiding excessive use [...] Read more.
Aquaculture uses large volumes of water, which is generally discharged without treatment, possibly causing scarcity and contamination. A sustainable aquaculture option is biofloc technology (BFT), which recycles food residues and toxic organic and inorganic compounds from the system through microorganisms, avoiding excessive use of water and serving as natural food for cultured aquatic organisms. The aim of this study was to identify the main factors that limit a Mexican aquaculture producer from adopting biofloc technology in their aquaculture production units (APUs). Strengths and weaknesses were methodologically analyzed through 248 questionnaires, applied to fish farmers in 16 states of the country with a mixed approach (quantitative and qualitative). Findings reveal that the main obstacles in the use of BFT are due to the following: low academic level, limited administrative capacity, scarce technological equipment in facilities, diversified productive activity, and obsolete regulations. Other factors that promote the adoption of BTFs for aquaculturists are production experience, favorable weather conditions, and abundant availability of water and energy. In conclusion, the use of BTF is a sustainable option for APUs despite the limiting factors identified in this research which slow down the growth of the sector. It is advisable to study Mexican producers with BFT, in order to spread their benefits to other APUs, and further evaluate the productivity of the aquaculture sector. This study considers production aspects, and also sustainable use of its resources, specifically, surface, energy, water, and food. Full article
(This article belongs to the Special Issue Technologies for Water Reuse: Current Status and Future Challenges)
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