Search Results (66)

Mayfly nymphs are reliable indicators of aquatic habitat quality, and whilst their presence and relative abundance are often used in bioassessment schemes, it is important to recognise that these attributes are affected by the sampling method employed. To test these effects, we sampled stream habitats for mayflies using two commonly used techniques in a standardised setup: aquatic sweep nets and manual collection from stones. These methods resulted in different success rates in detecting certain taxa depending on their biological traits (preferred microhabitat and locomotion type). Whilst species lists generally overlapped between the two methods, they yielded different values of total abundance, taxon richness, Shannon–Wiener’s diversity index, assemblage saprobic index, and general community structure. These results suggest that reliance on a single collection method is prone to yield only partial information for ecological assessments and emphasises the importance of employing a sampling technique that is appropriate for the study question and goals or combining more than one method. Based on these findings, we outline the scientific justifications for using each sampling method. Full article

Municipal wastewater effluent (MWWE) is a common source of nutrient enrichment and provides a route for emerging substances of concern (ESOCs) to enter aquatic systems. Community composition and abundance metrics of benthic macroinvertebrates are commonly utilized to assess ecological impacts associated with nutrient enrichment; however, the responses of these metrics in systems with diverse chemical mixtures from MWWE, are not well understood. This study specifically addresses the effects of cumulative loading of tertiary-treated MWWE through responses in benthic macroinvertebrate communities in experimental control and treatment streams. Treatment streams used source river water previously exposed to upstream wastewater treatment plants but with an additional 5% by volume tertiarily treated MWWE, while control streams used only source river water. Surbers and artificial substrate rock baskets were used to examine impacts on both established and colonizing benthic communities, respectively. No significant differences were observed between the control and treatment streams in any of the community metrics of well-established benthic communities. In contrast, significant decreases in colonizing taxon diversity and evenness were found between treatment and control streams. The dominant taxa (most abundant family, by percentage of sample) in the community, often filter feeders, significantly increased in percentage of the total community in treatment streams. This response was consistent with a nutrient enrichment effect, with no evidence of ESOC related toxicity. This study highlights the need for bioassessment programs to utilize approaches involving varied in-situ sampling methods and controlled exposure systems to gain a better understanding of how various stages of community-level development are impacted by urban pollutants such as MWWE. Full article

Reservoirs serve functional purposes such as irrigation and power generation. However, concerns are raised due to the alterations of the connected riverine ecosystems. Chironomidae (Diptera), a diverse aquatic macroinvertebrate group, are vital to the functioning of ecosystems and serve as water quality indicators. Their holometabolous development includes the pupal stage after four larval stages. The chironomid pupal skin (exuvia) is used in environmental assessments, where the Chironomid Pupal Exuvial Technique (CPET) is a recognized standard. The CPET method is adaptable to different freshwater environments and here was applied in the study of 28 man-made lakes in the Pannonian Lowlands and Dinaric Western Balkan Ecoregion in Croatia to obtain information on chironomid diversity and analyze the potential influence of environmental factors on the chironomid community. The lake surface was skimmed with an exuvial hand net (mesh size of 300 µm) along the lake edge with a transect length of 10 m in the area of accumulated debris of organic and inorganic matter. Individual exuviae were mounted in a Berlese mounting medium and identified by morphological characteristics to the lowest taxonomic level. During the study, 5698 chironomid pupal skins were collected, and 141 taxa (including 97 species) belonging to five subfamilies were identified. The tribe Tanytarsini comprised 40% of the identified taxa, with Paratanytarsus spp. being the most abundant. In the Dinaric ecoregion, Paratanytarsus bituberculatus dominated, while Microchironomus tener and the genus Cricotopus were the dominant taxa in the Pannonian ecoregion. Community structure in the Pannonian ecoregion was influenced by total organic carbon (TOC) and orthophosphates (PO₄³⁻), indicating higher anthropogenic pressure compared to the Dinaric ecoregion, where water conductivity influenced Chironomidae assemblages. The research has provided valuable and useful information on the chironomid diversity in man-made and highly altered water bodies, as some of the most vulnerable aquatic habitats to anthropogenic influence. The CPET method could be a useful tool for the ecological studies and bioassessment of water quality in Croatia. Full article

The bioavailability of heavy metals in soil is a crucial factor in determining their potential uptake by plants and their subsequent entry into the food chain. Various methods, including traditional chemical extractants and the diffusive gradients in thin films (DGT) technique, are employed to assess this bioavailability. The bioavailability of heavy metals, particularly cadmium (Cd) and lead (Pb), is also influenced by soil texture and their concentrations in the soil solution. The primary objectives of this experiment were to compare and correlate the assessment of the Cd and Pb bioavailability using the DGT technique and traditional extractants across two soil textural classes: sandy clay loam (SCL) and clay loam (CL) at two contamination levels: aged contaminated (NC) and artificially contaminated (AC). The specific objectives included assessing the bioavailability of Cd and Pb at different growth stages of the wheat plant and correlating the DGT-based bioassessments of Cd and Pb with their concentrations in various plant parts at different growth stages. This study also compared the effectiveness of the DGT method and traditional extraction techniques in assessing the bioavailable fractions of Cd and Pb in soil. The regression analysis demonstrated strong positive correlations between the DGT method and various extraction methods. The results showed that the wheat plants grown in the AC soils exhibited lower root, shoot, and grain weights compared to those grown in the NC soils, indicating that metal contamination negatively impacts plant performance. The concentrations of Cd and Pb in the wheat tissues varied across different growth stages, with the highest levels observed during the grain filling (S3) and maturity (S4) stages. It is concluded that the in situ assessment of Cd and Pb though DGT was strongly and positively correlated with the Cd and Pb concentration in wheat plant parts at the maturity stage. A correlation and regression analysis of the DGT assessment and traditional extractants showed that the DGT method provides a reliable tool for assessing the bioavailability of Cd and Pb in soils and helped in developing sustainable soil management strategies to ensure the safety of agricultural products for human consumption. Full article

Large rivers are difficult to sample due to their size yet critical to monitor because humans heavily rely upon and alter them. Aquatic invertebrates are commonly used to assess the ecosystem quality of streams, but methods to sample large rivers are underdeveloped. We sampled aquatic invertebrates using a Hess sampler and rock baskets in the Snake River near Jackson, Wyoming, USA. Hess samples collected more aquatic invertebrate taxa and a higher proportion of Ephemeroptera, Plecoptera, and burrowing taxa. Rock baskets collected a higher proportion of Trichoptera, filterers, and clinging taxa. Bioassessment metrics differed between sampling methods; richness, diversity, evenness, Ephemeroptera, Plecoptera, and Trichoptera (EPT), and Hilsenhoff’s biotic index produced higher values in Hess samples, and percent EPT was higher in rock baskets. Non-metric multidimensional scaling and analysis of similarity indicated that the samplers collected different assemblages (p < 0.001). The standard error of total invertebrate density was smaller and most taxa were collected with seven replicate samples. Understanding how sampling methods alter the aquatic invertebrates collected will help managers develop monitoring protocols that are best suited to the river and collect the most unbiased invertebrate assemblages. Full article

Shallow lakes according to the alternative states theory may present extremely different environmental conditions, clear water with abundant growth of macrophytes and turbid water with cyanobacterial blooms. The deterioration of water quality led to visible changes within submerged macrophytes and thus in available habitats for plant-associated biocenosis. Larvae of chironomids are the most numerous and widely distributed macroinvertebrates. Since benthic chironomids are used in the monitoring of environmental changes and in paleolimnological research, epiphytic chironomids are not well known in this regard. The larvae can be used as indicators of lake macrophyte status. The present study focuses on plant-associated chironomids of a group of ten shallow lakes of the Polesie region (eastern Poland). The lakes were classified with alternative states theory as macrophyte-dominated (MD), phytoplankton–macrophyte-dominated (PMD) and phytoplankton-dominated (PD). The domination structure of epiphytic chironomids showed significant changes between lake types, with the highest abundance of Paratanytarsus austriacus in MD lakes, Endochironomus albipennis in PMD lakes and Cricotopus sp. (gr. sylvestris) in PD lakes. The highest mean density was noted in PD lakes while the highest species diversity (values of Shannon–Wiener index) in PMD lakes. Moreover, environmental variables (macrophyte biomass, Secchi disc depth, chlorophyll-a and TP) differentiating lake types were used in RDA analysis to evaluate their effect on chironomid taxa distribution. Next, the variables with a significant effect on specific chironomid taxa were used in multivariate regression analysis. The results led to the creation of a model of distribution of chironomid taxa with regard to lake type. Full article

This study explores the impact of anthropogenic land use changes on the macroinvertebrate community structure in the streams of the Cangshan Mountains. Through field collections of macroinvertebrates, measurement of water environments, and delineation of riparian zone land use in eight streams, we analyzed the relationship between land use types, stream water environments, and macroinvertebrate diversities. The results demonstrate urban land use type and water temperature are the key environmental factors driving the differences in macroinvertebrate communities up-, mid-, and downstream. The disturbed streams had lower aquatic biodiversity than those in their natural state, showing a decrease in disturbance-sensitive aquatic insect taxa and a more similar community structure. In the natural woodland area, species distributions may be constrained by watershed segmentation and present more complex community characteristics. Full article

Activated blood coagulation factor X (FXa) plays a critical initiation step of the blood-coagulation pathway and is considered a desirable target for anticoagulant drug development. It is reversibly inhibited by nonvitamin K antagonist oral anticoagulants (NOACs) such as apixaban, betrixaban, edoxaban, and rivaroxaban. Thrombosis is extremely common and is one of the leading causes of death in developed countries. In previous studies, novel thiourea and oxime ether isosteviol derivatives as FXa inhibitors were designed through a combination of QSAR studies and molecular docking. In the present contribution, molecular dynamics (MD) simulations were performed for 100 ns to assess binding structures previously predicted by docking and furnish additional information. Moreover, three thiourea- and six oxime ether-designed isosteviol analogs were then examined for their drug-like and ADMET properties. MD simulations demonstrated that four out of the nine investigated isosteviol derivatives, i.e., one thiourea and three oxime ether ISV analogs, form stable complexes with FXa. These derivatives interact with FXa in a manner similar to Food and Drug Administration (FDA)-approved drugs like edoxaban and betrixaban, indicating their potential to inhibit factor Xa activity. One of these derivatives, E24, displays favorable pharmacokinetic properties, positioning it as the most promising drug candidate. This, along with the other three derivatives, can undergo further chemical synthesis and bioassessment. Full article

High-elevation tropical streams are under increasing threat from human activities and climate change. Specifically, Ecuadorian Andean streams require priority actions such as bioassessment (e.g., biodiversity and functional ecology of macroinvertebrates) in order to generate adequate environmental management policies. Therefore, we investigated the distribution and composition of the macroinvertebrate taxa and their functional feeding groups in relation to the environmental variables in the Antisana river basin (Andean–Ecuadorian Region). We sampled macroinvertebrates from 15 locations to assess ecological conditions (ECs), expressed as the Biological Monitoring Working Party Colombia (BMWP-Col) classes, the Andean Biotic Index (ABI) and the Andean–Amazon Biotic Index (AAMBI). Results indicate that dissolved oxygen saturation, elevation, nutrient concentration and conductivity contributed significantly to the composition of the taxa and functional feeding groups (FFGs). Taxa diversity and FFGs were more abundant in the best EC sites. Shredders (SH) were, overall, dominant and abundant at sites with medium-high ECs. Scrapers constituted the second most prevalent assemblage, exerting dominance at moderate ecological conditions (high altitude and high oxygen saturation). Collector–gathers (CGs) are less sensitive to contamination than the previous two groups but were equally abundant at medium-high EC sites. Collector–filterers (CFs) and parasites (PAs) were less abundant, although the presence of the former was slightly related to better environmental conditions. Predators (PRs) were almost absent throughout the study, but they were collected from poor EC sites. CGs, PAs and PRs showed more tolerance to the presence of human disturbances (e.g., hydraulic constructions or slope erosion). The BMWP-Col index seems to be the best fit for this ecosystem, showing a significant difference in FFG between the index classes, compared to the other indices evaluated. The results of this investigation may be regarded as a fundamental starting point and used in future bioassessment work in other similar ecosystems, particularly high-altitude tropical Ecuadorian streams. Full article

Incorporating diatoms species and their autecology from reference stream conditions is essential for improving the accuracy of North American diatom bioassessments. This study documents a voucher flora and physicochemical conditions of Upper Three Runs Creek (UTRC), a tributary to the Savannah River that has been protected from heavy human activity for the last 50 years. The algae of UTRC and its watershed have been monitored continuously during this time by the Academy of Natural Sciences in Philadelphia to detect potential impacts from the Savannah River Site and Plant Vogtle. Standard protocols were used to sample and denote substrate types and preferences and to estimate relative abundances of diatom species. Data from artificial substrates (diatometers) were compared to composite samples. Phenotypic plasticity of taxa from Gomphonema parvulum, Eunotia incisa, and Tabellaria flocculosa sensu lato species complexes were considered in biodiversity metrics. We provide documentation of these separations. A total of 297 species/operational taxonomic units (OTUs) were recorded. For 2018 samples, Eunotia rhomboidea accounted for 8.3% for separated taxa methods and G. parvulum sensu lato (16.2%) dominated for combined taxa methods. Luticola goeppertiana (5.4%) was the most abundant taxon in the 1956 samples. The 1956 composite samples species richness means were greater and significantly greater than those for other sample types (ANOVA, df = 3, p = 0.004). The recounted 1956 composite samples had the highest species richness (153) followed by the left diatometer (129). At the same location, the right and left diatometers were not similar. Both methods (diatometers and composite sampling) are useful when assessing species richness. Diatom community composition indicated an acidic and highly oxygenated environment. Full article

This research describes fish assemblages and associated aquatic ecosystem degradation patterns in the Büyük Menderes River, one of Turkey’s most important Anatolian basins. Using standard electrofishing, 44 river sites were sampled throughout the basin accounting for the distribution and abundance of 20 native and seven non-native species, totaling 13,535 fish specimens. At each sampling site, anthropogenic pressures were assessed, and information was gathered to determine the degree of human-induced degradation that may affect fish and their habitats; each site was scored on the basis of a site quality index (SQI). Using the best-available relatively less-degraded river sites, cluster analyses of the samples defined six fish assemblage river types. Further classification of all fish samples utilizing bipartite network analysis resulted in comparable assemblage groupings. The European Fish Index (EFI+) with minor adaptations was applied for assessing river ecological integrity at all sampled sites in order to explore the utility of this widely used index. The EFI+ index results correlated with scores of the SQI but provided a very narrow assessment range, thus failing to accurately and consistently assess the severity of anthropogenic degradation. We recommend a new multimetric index to be developed for the Western Anatolian Ecoregion, of which this basin is a part. The data and insights gained from this exercise may help continue fish-based indicator development for policy-relevant management and conservation in Turkey’s rivers. Full article

Alzheimer’s disease (AD) is a neurodegenerative disorder that jeopardizes the lives of diagnosed patients at late stages. This study aimed to assess, for the first time, the efficiency of germanium dioxide nanoparticles (GeO₂NPs) in mitigating AD at the in vivo level compared to cerium dioxide nanoparticles (CeO₂NPs). Nanoparticles were synthesized using the co-precipitation method. Their antioxidant activity was tested. For the bio-assessment, rats were randomly assigned into four groups: AD + GeO₂NPs, AD + CeO₂NPs, AD, and control. Serum and brain tau protein, phosphorylated tau, neurogranin, amyloid β peptide 1-42, acetylcholinesterase, and monoamine oxidase levels were measured. Brain histopathological evaluation was conducted. Furthermore, nine AD-related microRNAs were quantified. Nanoparticles were spherical with diameters ranging from 12–27 nm. GeO₂NPs exhibited a stronger antioxidant activity than CeO₂NPs. Serum and tissue analyses revealed the regression of AD biomarkers to almost control values upon treatment using GeO₂NPs. Histopathological observations strongly supported the biochemical outcomes. Then, miR-29a-3p was down-regulated in the GeO₂NPs-treated group. This pre-clinical study substantiated the scientific evidence favoring the pharmacological application of GeO₂NPs and CeO₂NPs in AD treatment. Our study is the first report on the efficiency of GeO₂NPs in managing AD. Further studies are needed to fully understand their mechanism of action. Full article

The biodiversity of stream fishes is critically threatened globally, and a major factor leading to the loss of biodiversity is anthropogenic land use in stream catchments, which act as stressors to stream fishes. Declines in the biodiversity of stream fish are often identified by a loss of species or fewer individuals comprising assemblages, but biological degradation can also occur with increases in non-native species and/or the spread of fish tolerant to anthropogenic land use, suggesting the importance of accounting for the distinctness of assemblages along with richness and diversity to best characterize the response of stream fish assemblages to anthropogenic landscape stressors. We summarized stream fish assemblages from 10,522 locations through multiple biodiversity indices and then quantified index responsiveness to natural landscape variables and anthropogenic land use in stream network catchments across five freshwater ecoregions in the temperate mesic portion of the United States. Indices included species richness, Shannon’s diversity, Pielou’s evenness, beta diversity, taxonomic diversity, and taxonomic distinctness. First, we tested for correlations among indices across freshwater ecoregions and found that while species richness and Shannon’s diversity were always highly correlated, taxonomic distinctiveness was not highly correlated with other biodiversity indices measured except taxonomic diversity. Then, we used multiple linear regression to predict biodiversity indices in each of the five freshwater ecoregions to identify significant landscape variables from natural landscape and anthropogenic land uses. Most indices were consistently predicted by catchment area, and many were predicted by elevation, except for beta diversity, emphasizing the importance of these natural landscape variables on biodiversity. In contrast, taxonomic distinctness was often predicted by the amount of urban land use in the catchment, but the direction of the relationship varied. The proportion of agriculture land use in the network catchment was a more consistent predictor of species richness, beta diversity, and Shannon’s diversity. Our analyses show that taxonomic distinctness in freshwater fishes characterize a unique element of biodiversity in relationships with anthropogenic land uses in a streams network catchment. Taxonomic distinctness may also be an effective metric for the bioassessment of stream fishes along with richness and diversity indices to help preserve biodiversity in regard to current and future anthropogenic land uses. Full article

Disentangling the effects of natural factors and human disturbances on freshwater systems is essential for understanding the distributions and composition of biological communities and their relationship with physicochemical and biological factors. As the spatial extent of ecological investigations increases from local to global scales, efforts to account for the increasing influence of natural factors become more important. This article synthesizes the current knowledge and commonly used approaches for disentangling these effects on aquatic systems. New understanding has been facilitated by the availability of large-scale geospatial landscape databases that facilitate regional analyses and classifications in conjunction with novel approaches to identify reference conditions and statistical partitioning analyses. This synthesis begins with a summary of how natural factors and human disturbances interactively affect aquatic systems. It then provides an overview of why it is essential to separate the effects of natural factors and human disturbances and a description of examples of landscape databases that make the separation of natural and human factors feasible. It last synthesizes currently-used common approaches for separating the effects of natural factors from human disturbances. Our synthesis assembles representative approaches to disentangling human disturbances in one place to provide new insights that stimulate integrated uses of multiple approaches and the development of new approaches so that management actions can be taken to protect and restore aquatic ecosystem health. Full article

The Odonata are not typically regarded as informative taxa for stream bioassessment in North America compared to other insects, particularly when monitoring the ecological impacts of organic pollution. However, we hypothesized that stream-dwelling odonates are useful bioindicators of riparian conditions because vegetation associated with streams is used for oviposition and establishing breeding territories and is likely a cue for a suitable nymphal habitat. We sampled odonates from multiple microhabitats and all macroinvertebrates from riffle habitat in 12 Ozark Highlands (USA) spring streams along a gradient of riparian conditions. We also measured a standard suite of physical and chemical variables in each stream. We compared various aspects of the odonate and riffle macroinvertebrate assemblages among sites to evaluate sensitivity to variables associated with riparian structure compared to the other physical and chemical variables measured. The odonates were strongly associated with riparian-specific variables, while riffle macroinvertebrates were associated with riparian variables to a lesser degree. The additional environmental variables explained minimal variation in either assemblage. Overall, our results suggest that Odonata alone could be useful for biomonitoring associated with riparian structure around Ozark spring streams. The sensitivity of odonates to riparian conditions in other Nearctic regions should be further studied to identify regional and species-specific differences. Full article