Search Results (43)

Sugarcane is one of the most economically important crops, particularly in Brazil, which is the largest sugarcane producer globally. Sugarcane smut, caused by the fungus Sporisorium scitamineum (Syd.), is a major disease of this crop. This study investigated the response of 165 sugarcane genotypes to smut infection under greenhouse conditions using the needle-bud puncture method. The disease incidence, the Area Under the Disease Progress Curve (AUDPC), and the relative Area Under the Disease Progress Curve (rAUDPC) were calculated, along with broad-sense heritability (h²) and the genotype’s effects. Spearman’s correlation coefficient (r²) was used to determine the correlation between the number of corresponding genotypes with smut incidence in both the greenhouse and the field. The incidence of smut ranged from 0% to 88%, and AUDPC values varied from 0 to 500 for 131 of the 165 genotypes. Based on the rAUDPC, 54 genotypes were classified as highly resistant. The correlation between greenhouse and field disease expression was positive and moderately strong (r² = 61%), and the h² value in greenhouse conditions was 74%. The needle-bud puncture method combined with the rAUDPC values was promising for identifying susceptible genotypes and highlighting potential smut-resistant genotypes. Full article

Studies were initiated to find new effective fungicides to use under field conditions to discover novel approaches for optimizing disease management in sugar beet crops. Cercospora leaf spot (CLS), a prevalent foliar disease in sugar beet crops worldwide, is caused by the fungal pathogen Cercospora beticola Sacc. This disease has become the most prevalent pathogen in sugar beet crops across nearly all European growing regions, including Hungary. The epidemic spread of this disease can cause up to 50% yield loss. The use of fungicides has been a cornerstone in managing CLS of sugar beet due to the limited efficacy of non-chemical alternatives. However, the emergence of fungicide-resistant strains of Cercospora beticola Sacc. in recent decades has compromised the effectiveness of certain fungicides, particularly those belonging to the QoI (FRAC Group 11) and DMI (FRAC Group 3) classes. Hungary is among the many countries where resistance to these fungicides has developed due to their frequent application. Picolinamides represent a novel class of fungal respiration inhibitors targeting Complex III within the Quinoine-Inside Inhibitor (QiI) group. Two innovative fungicides from this class, fenpicoxamid and florylpicoxamid (both classified under FRAC Group 21), were evaluated for their efficacy in managing CLS of sugar beet in Hungary during the 2020 and 2021 growing seasons. Both fungicides were applied as formulated products at various application rates and demonstrated superior efficacy in controlling CLS compared to untreated control plots and the reference fungicides difenoconazole and epoxiconazole. The results consistently demonstrated that all tested application rates of fenpicoxamid and florylpicoxamid effectively controlled CLS in sugar beet, exhibiting a clear dose–response relationship. Disease severity, as measured by the area under the disease progress curve (AUDPC), was significantly correlated with yield reduction but showed no significant association with root sugar content. Moreover, data from both study years indicated that picolinamide fungicides applied at a rate of 75 g ai/ha significantly outperformed difenoconazole (100 g ai/ha) in controlling the CLS of sugar beet. Additionally, higher application rates of picolinamides at 100–150 g ai/ha outperformed epoxiconazole at 125 g ai/ha in disease suppression. Fenpicoxamid is currently registered for use in cereals within Europe, and outside of Europe in Banana against Black Sigatoka (eff. Mycosphaerella fijiensis). Florylpicoxamid, while not yet registered in Europe, is undergoing approval processes in various countries worldwide for a range of crops and is continually being evaluated for potential market introduction. Additional details regarding the efficacy of florylpicoxamid against CLS in sugar beet were presented at ‘The 10th International Conference on Agricultural and Biological Sciences (ABS 2024, Győr-Hungary)’ in 2024. Full article

The corn stunt disease complex, caused by the mollicutes Spiroplasma kunkelii (Css) and the maize bushy stunt (MBS) phytoplasma, is a major phytosanitary issue for corn production in the neotropical region of Brazil. In this study, we investigated the presence of alternative hosts for S. kunkelii (Css) in the Brazilian Cerrado biome and explored the potential for asymptomatic Css infections in maize plants. To identify possible alternative hosts, we collected samples from ornamental and native plants located in Cerrado regions with a high incidence of corn stunt disease. We also monitored the disease’s progression over time and calculated the area under the disease progression curve (AUDPC). Additionally, we sampled healthy, asymptomatic maize plants growing near symptomatic ones and analyzed all the samples using qPCR to detect the pathogen. Our results showed no Css infection in the sampled alternative host species and no asymptomatic infections in the nearby maize plants. The incidence of maize stunting varied significantly among the sample years and counties. In Aparecida do Rio Negro, the infection rate was six times higher in 2020 compared to 2019, while Porto Nacional showed an 11-fold increase. During surveillance from March to July, the infection rate at the Sierra site went from less than 3% in March 2019 to 6% in July (F_1,4 = 415.84; p = 0.0003). MBS infection increased significantly, while S. kunkelii remained stable below 3%. In 2020, MBS increased from 3% to more than 12%. A similar trend was observed at the Sede site, where MBS increased from 9% in 2019 to 11% in 2020. An increase in the AUDPC was observed both within individual years and between 2019 and 2020, indicating a worsening trend in disease severity. Overall, our findings reinforce the need for preventive measures in managing maize crop fields. Full article

Quinoa is a healthy food that possesses high levels of protein that is enriched for dietary essential amino acids. The crop is highly diverse and well-adapted to changing climatic conditions. In spite of being vulnerable to pests and diseases, the development of new resistant varieties is possible. Taking advantage of this genetic variability is crucial for breeding programs, especially to adapt quinoa to the shifting needs of producers. In this study, 25 Peruvian accessions and two commercial varieties were characterized and agronomically evaluated in the Peruvian Pacific desert. Specific methodologies and descriptors of existing crops were used, analyzing a total of 24 quantitative and 23 qualitative variables with 15 repetitions per accession. The data were processed using descriptive statistics and a multivariate analysis. The results showed a high variability in morphological characteristics, with an area under the disease progress curve (AUDPC) of the presence of mildew between 529 and 1725, highlighting ACC06 with a lower severity of mildew. The percentage of saponins varied between 0.04 and 0.21 percent, with ACC06 being the one with the lowest percentage. Regarding the crop yield, it ranged between 0.35 and 8.80 t ha⁻¹, highlighting the high-yielding accessions ACC55 and ACC14. These results were promising for the improvement of quinoa yield in the production conditions of the Peruvian Pacific desert. Full article

Septoria leaf blotch (SLB), caused by Zymoseptoria tritici, is one of the most important foliar diseases of wheat. The management of this disease is assisted by selecting a sowing time and seeding density that is less favorable to the pathogen. The aim of this research was to evaluate the severity of SLB on winter wheat cv. ‘Etana’ sown at three different sowing times and three seed rates. The severity assessments were performed on the upper two leaves three times during the growth stages using the phenological growth stage key developed by the Biologische Bundesanstalt, Bundessortenamt, and Chemical industry (BBCH), namely stages 37–41, 59–65, and 75. The area under the disease progress curve (AUDPC) was evaluated in each plot. In 2022, seed rates showed significant differences (p = 0.0047), while sowing times did not show significant differences. In contrast, both seed rate and sowing time showed significant effects in 2021 (p = 0.0004 for sowing time and p < 0.0001 for seed rate). During the 2021 growth stage BBCH 75, late sowing times exhibited a significant reduction in SLB on the first leaf. The reduction ranged from 47.0% to 52.6% compared to the optimal sowing time, and from 59.2% to 66.2% compared to the early sowing time. At optimal sowing times (between 11 September and 25 September), seed rates of 400 and 450 seeds/m² resulted in a low SLB. At late sowing times in 2022, a lower SLB (43.2% compared to the early sowing time) was obtained from seed rates of 400 seeds/m². No significant interaction was observed between sowing time and seed rate across both study years. In the absence of interaction, the effects of sowing time and seed rate on SLB severity were independent and not additive. In 2022, the highest values of AUDPC were recorded for the early sowing time and the highest seed rate. Increasing the seed rate (450 seeds m⁻²) gave higher AUDPC at early sowing time with significant differences compared to other seed rates at optimal or late sowing times. In conclusion, our findings highlight the significant influence of sowing time and seed rate on SLB severity in winter wheat. Understanding these factors can inform agricultural practices to better manage SLB. Future research should explore additional agronomic practices and environmental factors to develop comprehensive strategies for SLB management. Full article

Chlorella vulgaris and Tetradesmus obliquus were tested as biocontrol agents against the phytopathogenic fungus Fusarium oxysporum. This evaluation was conducted through in vitro and in vivo trials with spinach (Spinacia oleracea L.). The in vitro trials showed that C. vulgaris and T. obliquus were able to inhibit the phytopathogen, showing a similar inhibitory effect to that of the positive controls (Rovral, BASF^® and Biocontrol T34, Biocontrol Technologies^® S.L.). C. vulgaris aqueous suspensions at 3.0 g L⁻¹ led to a hyphal growth of 0.55 cm, each corresponding to a reduction of 63% of fungal growth. With T. obliquus, the hyphal growth was 0.53 cm when applied at a concentration of 0.75 g L⁻¹, having an inhibition of fungus growth of 64%. Thereafter, these results were validated in an in vivo trial on spinach using the same controls. The results revealed a lower severity and disease incidence and a reduction in the disease’s AUDPC (area under the disease progress curve) when spinach was treated with the microalgae suspensions. Overall, these findings highlight the potential of C. vulgaris and T. obliquus suspensions as promising biocontrol agents against F. oxysporum in spinach when applied through irrigation. Full article

The use of resistant varieties is an important strategy for managing tomato bacterial spot. The objective of this study was to evaluate the reaction of tomato genotypes to Xanthomonas euvesicatoria pv. perforans. The experiment was conducted in a randomized block design with 10 genotypes and four repetitions. The genotypes consisted of hybrids (UFU-1, UFU-2, UFU-3), wild resistant accession Solanum pennellii, commercial susceptible cultivar Santa Clara and homozygous lines (UFU-5, UFU-6, UFU-11, UFU-12, UFU-15). The UFU B8 isolate of X. euvesicatoria pv. perforans was used. The bacterial suspension was prepared and adjusted in a spectrophotometer OD₅₅₀ = 0.5 (1 × 10⁹ CFU mL⁻¹). Inoculation occurred 10 days after transplantation. Disease severity was assessed at 3, 6, 9, 12 and 15 days after inoculation, and the area under the disease progress curve (AUDPC) was calculated. There was a significant difference between the genotypes regarding the severity of the disease at 3, 6 and 12 days after inoculation. Lineages 5, 6 and 12, the hybrid UFU-1 and the wild accession S. pennellii showed the lowest severity of the disease, being promising for promoting genetic improvement programs aimed at resistance to the bacteria. Full article

Bacterial blight (BB) caused by Xanthomonas oryzae pv. Oryzae (Xoo) is a serious disease of rice worldwide that can reduce crop yield and affect food insecurity. A rice resistance variety is an alternate way to solve this problem. The broad-spectrum resistance (BSR) of ULR207 is important for durable resistance to several of the Xoo isolates. However, the inheritance of this resistance gene in ULR207 must be known before it can be utilized. Thus, this study aimed to survey the BB resistance gene with reference to the BB resistance gene for identification of non-analogous or analogous genes and confirmation of a broad-spectrum resistance, to investigate the gene effect, the number of genes, and the heritability of the BB resistance gene in the ULR207 variety. Six populations of two crosses (Maled Phai × ULR207 and RD6 × ULR207), i.e., ULR207 (Donor parent), Maled Phai and RD6 (Recurrent parent), F₁, F₂, BC₁P₁, and BC₁P₂ were constructed. These materials were evaluated for BB resistance by clipping methods under greenhouse conditions using a virulence isolate of a pathogen in Thailand. The results showed that ULR207 exhibited the strongest against BB with 0.8 of BSR with low area under the disease progress curve (AUDPC). Molecular screening for surveying of the BB resistance gene in ULR207 revealed a non-analogous resistance gene with resistance check varieties. The phenotype of the disease lesion length of F₂ and BC₁P₂ populations exhibited a ratio of 1:3 and 1:1 (resistant: susceptible), respectively, revealing a single recessive gene in both crosses. The scaling test parameters A, B, and C were non-significant (p < 0.01), indicating that variation in data was sufficiently explained by additive (d) and dominance (h) components. The gene action of ULR207 was controlled by additive gene action. Heritability of the two crosses, Maled Phai x ULR207 and RD6 x ULR207, exhibited high values with 0.817 and 0.716, whereas the numbers of the genes were 1.4 and 1.2, respectively. The result indicated that the breeding strategy could be employed in early generations when using ULR207 as a new source of bacterial blight resistance. Full article

Plant resistance inducers (PRIs) are potential alternatives for controlling grapevine downy (DM) and powdery (PM) mildews in vineyards. In a 3-year field study, we evaluated the field efficacy of six commercial PRIs of chemical and natural origin against DM and PM diseases when applied at designated vine growth stages in a mixture with low doses of copper and sulfur, and only when advised by weather-driven disease models. The disease severity and incidence were evaluated for each season at key growth stages (i.e., the end of flowering, berries pea-sized, veraison, and pre-harvest), and areas under the disease progress curves (AUDPC) were calculated and compared with those of nontreated vines. These risk-based applications resulted in a 41% and 61% reduction of interventions against DM and PM, respectively, compared to the official advice for integrated pest management in the growing area. These applications provided a disease control efficacy of 88% for DM and 93% for PM; the disease severity on bunches never exceeded 5%. Overall, when the disease severity was expressed as AUDPC, we observed higher efficacy of all the PRIs for PM, and of laminarin and cerevisane for DM. We also found that potassium phosphonate and fosetyl-Al (commonly used against DM) were effective against PM, and cos-oga (used against PM) was effective against DM. These results broaden the application and integration of PRIs in viticulture. Full article

Rice blast disease, caused by the fungus Magnaporthe oryzae, poses a significant threat to rice cultivation. One effective way to deal with this disease is to identify and introduce resistant varieties using different breeding methods. This study utilized a population of 153 recombinant inbred lines (RILs) derived from the crossing of the Shahpasand (SH) and IR28 varieties, characterized by susceptibility and resistance to leaf blast, respectively. In combination with 12 control varieties, these genotypes were subjected to an extensive evaluation of disease severity (5 stages), the area under the disease progress curve (AUDPC), type, and the infection rate in 2021 and 2022. Analysis of variance revealed significant genetic variation, highlighting the potential of the RIL population for identifying and selecting resistant lines. Employing cluster analysis and the multi-trait genotype-ideotype distance index (MGIDI), 17 lines were identified as the most resistant over a two-year evaluation period. The average AUDPC for these resistant lines was estimated at 2.435 ± 0.114, and lines 17 and 111 had the lowest AUDPC (1.526 and 1.630, respectively) and showed the least infection in two years. Conversely, lines 42 and 43 showed the highest AUDPC values (255.312 and 248.209) along with heightened sensitivity. The use of MGIDI yielded a substantial selection differential (SD) of −59.12% for traits related to leaf blast disease resistance, demonstrating the effectiveness of this method. Furthermore, new recombinant populations are expected to be developed in future plant breeding projects by crossing the most susceptible and resistant lines, which will be new sources of resistance to this disease. Full article

Tomato (Solanum lycopersicum L.) production in the USA has been severely impacted by the tomato yellow leaf curl virus (TYLCV). Furthermore, a complex association of whitefly-transmitted TYLCV (genus, begomovirus) and tomato chlorosis virus (ToCV, genus, crinivirus) were recently identified in tomato. Several tomato cultivars were developed and commercialized with intermediate resistance (IR) against TYLCV-IL (Israel), the predominant strain of TYLCV found in Georgia, USA. TYLCV-resistant cultivars were tested in open field conditions against multiple whitefly-transmitted viruses in Georgia under natural disease pressure during the fall of 2022. The area under disease progress curve (AUDPC) over time showed a steady increase in disease severity among all cultivars. Further analysis of infected samples using high throughput sequencing (HTS) and quantitative PCR (qPCR) revealed the presence of TYLCV and ToCV in symptomatic upper and lower leaves, respectively. Moreover, the presence of both viruses in upper and lower leaves was determined. A mixed infection of both viruses, TYLCV and ToCV, resulted in severe disease development which may enhance the commercial tomato plants to break resistance and lead to decreased fruit quality and marketable yields. Full article

A highly aggressive strain (CMN14-5-1) of Clavibacter nebraskensis bacteria, which causes Goss’s wilt in corn, induced severe symptoms in a susceptible corn line (CO447), resulting in water-soaked lesions followed by necrosis within a few days. A tolerant line (CO450) inoculated with the same strain exhibited only mild symptoms such as chlorosis, freckling, and necrosis that did not progress after the first six days following infection. Both lesion length and disease severity were measured using the area under the disease progression curve (AUDPC), and significant differences were found between treatments. We analyzed the expression of key genes related to plant defense in both corn lines challenged with the CMN14-5-1 strain. Allene oxide synthase (ZmAOS), a gene responsible for the production of jasmonic acid (JA), was induced in the CO447 line in response to CMN14-5-1. Following inoculation with CMN14-5-1, the CO450 line demonstrated a higher expression of salicylic acid (SA)-related genes, ZmPAL and ZmPR-1, compared to the CO447 line. In the CO450 line, four genes related to programmed cell death (PCD) were upregulated: respiratory burst oxidase homolog protein D (ZmrbohD), polyphenol oxidase (ZmPPO1), ras-related protein 7 (ZmRab7), and peptidyl-prolyl cis-trans isomerase (ZmPPI). The differential gene expression in response to CMN14-5-1 between the two corn lines provided an indication that SA and PCD are involved in the regulation of corn defense responses against Goss’s wilt disease, whereas JA may be contributing to disease susceptibility. Full article

One of the diseases with the greatest economic impact on coffee cultivation worldwide and particularly in Peru is coffee rust (Hemileia vastatrix). The search for sustainable control methods as disease management strategies in coffee cultivation is necessary. The objective of this research was to determine the effectiveness of five biopesticides based on lemon verbena (Cymbopogon citratus) for the control of rust applied in laboratory and field conditions to allow the recovery of coffee (Coffea arabica L. var. typica) in La Convención, Cusco, Peru. Five biopesticides (oil, macerate, infusion, hydrolate and Biol) and four concentrations (0, 15, 20 and 25%) were evaluated. The biopesticides were evaluated under laboratory conditions (light and dark) at different concentrations. The design used was completely randomized in a factorial scheme. The biopesticides were incorporated into the culture medium and inoculated with 400 uredospores of rust, and the germination percentage was evaluated. Under field conditions, the biopesticides at the same concentrations were evaluated for 4 weeks after application. Under these field conditions, the incidence, severity and area under the disease progress curve (AUDPC) of selected plants with a natural degree of infection were evaluated. In the laboratory, the results showed that all biopesticides were effective in reducing the germination of rust uredospores to values <1% of germination in relation to the control, which showed values of 61% and 75% in the light and dark, respectively, independent of the concentration used, with no significant differences between them. In the field, 25% oil promoted the best response with values <1% and 0% incidence and severity, respectively, in the first two weeks after application. The AUDPC for this same treatment showed values of 7 in relation to 1595 of the control. Cymbopogon citratus oil is an excellent biopesticide that can be used to control coffee rust. Full article

Uromyces viciae-fabae Pers. de-Bary is an important fungal pathogen causing rust in peas (Pisum sativum L.). It is reported in mild to severe forms from different parts of the world where the pea is grown. Host specificity has been indicated in this pathogen in the field but has not yet been established under controlled conditions. The uredinial states of U. viciae-fabae are infective under temperate and tropical conditions. Aeciospores are infective in the Indian subcontinent. The genetics of rust resistance was reported qualitatively. However, non-hypersensitive resistance responses and more recent studies emphasized the quantitative nature of pea rust resistance. Partial resistance/slow rusting had been described as a durable resistance in peas. Such resistance is of the pre-haustorial type and expressed as longer incubation and latent period, poor infection efficiency, a smaller number of aecial cups/pustules, and lower units of AUDPC (Area Under Disease Progress Curve). Screening techniques dealing with slow rusting should consider growth stages and environment, as both have a significant influence on the disease scores. Our knowledge about the genetics of rust resistance is increasing, and now molecular markers linked with gene/QTLs (Quantitative Trait Loci) of rust resistance have been identified in peas. The mapping efforts conducted in peas came out with some potent markers associated with rust resistance, but they must be validated under multi-location trails before use in the marker-assisted selection of rust resistance in pea breeding programs. Full article

Diseases caused by necrotrophic fungi, such as the cosmopolitan Sclerotinia sclerotiorum and the Diaporthe/Phomopsis complex, are among the most destructive diseases of sunflower worldwide. The lack of complete resistance combined with the inefficiency of chemical control makes assisted breeding the best strategy for disease control. In this work, we present an integrated genome-wide association (GWA) study investigating the response of a diverse panel of sunflower inbred lines to both pathogens. Phenotypic data for Sclerotinia head rot (SHR) consisted of five disease descriptors (disease incidence, DI; disease severity, DS; area under the disease progress curve for DI, AUDPCI, and DS, AUDPCS; and incubation period, IP). Two disease descriptors (DI and DS) were evaluated for two manifestations of Diaporthe/Phomopsis: Phomopsis stem canker (PSC) and Phomopsis head rot (PHR). In addition, a principal component (PC) analysis was used to derive transformed phenotypes as inputs to a univariate GWA (PC-GWA). Genotypic data comprised a panel of 4269 single nucleotide polymorphisms (SNP), generated via genotyping-by-sequencing. The GWA analysis revealed 24 unique marker–trait associations for SHR, 19 unique marker–trait associations for Diaporthe/Phomopsis diseases, and 7 markers associated with PC1 and PC2. No common markers were found for the response to the two pathogens. Nevertheless, epistatic interactions were identified between markers significantly associated with the response to S. sclerotiorum and Diaporthe/Phomopsis. This suggests that, while the main determinants of resistance may differ for the two pathogens, there could be an underlying common genetic basis. The exploration of regions physically close to the associated markers yielded 364 genes, of which 19 were predicted as putative disease resistance genes. This work presents the first simultaneous evaluation of two manifestations of Diaporthe/Phomopsis in sunflower, and undertakes a comprehensive GWA study by integrating PSC, PHR, and SHR data. The multiple regions identified, and their exploration to identify candidate genes, contribute not only to the understanding of the genetic basis of resistance, but also to the development of tools for assisted breeding. Full article