Search Results (1,792)

Background/Objectives: Pancreatic ductal adenocarcinoma (PDAC) is a highly aggressive malignancy characterized by limited treatment options and poor prognosis. Gemcitabine is a commonly used chemotherapy; however, gemcitabine resistance in PDAC poses a critical barrier to effective treatment, as the underlying mechanisms are not yet fully understood. Methods: This study employs an exploratory untargeted metabolomics approach to investigate metabolic differences in PDAC cells in the presence and absence of gemcitabine treatment. HPAF-II, MIA PaCa-2, and BxPC-3 cell lines were used as models for gemcitabine-resistant, moderately responsive, and permissive PDAC cells, respectively. Results: MTT assay results revealed that BxPC-3 cells are highly sensitive to gemcitabine treatment, HPAF-II cells are the most resistant, and MIA PaCa-2 cells exhibit moderate sensitivity. Orthogonal Partial Least Squares Discriminant Analysis (OPLS-DA) of the metabolomics data demonstrated clear differentiation of gemcitabine-treated and untreated (control) cells. When comparing the treated vs. control conditions, 170 metabolites matched to an in-house library of standards were significant (p < 0.05 or fold change ≥ 2 or VIP ≥ 1) differentiators in HPAF-II cells, whereas MIA PaCa-2 and BxPC-3 cells had 178 and 218 differentiating metabolites, respectively. HPAF-II cells treated with gemcitabine had significantly higher levels of N-acetylneuraminic acid and 7-dehydrocholesterol compared with the control group. In contrast, these metabolites were significantly lower or non-significant in BxPC-3 treated cells. Pathway analysis revealed that the steroid biosynthesis pathway was significantly perturbed in HPAF-II cells, whereas amino sugar and nucleotide sugar metabolism was predominantly altered in BxPC-3 cells. Conclusions: Overall, this exploratory study reveals metabolic differences between treated and untreated cells to derive targeted therapeutic strategies that could be used in the future to improve treatment outcomes for PDAC patients. Full article

Postharvest quality deterioration of Korla fragrant pear (Pyrus sinkiangensis Yu) severely constrains its market value, yet the regulatory role of preharvest soil management in shaping postharvest performance remains poorly understood. Although green manure is widely adopted to ameliorate orchard soil degradation, species-specific modulation of postharvest storage trajectories and the quantitative fidelity of soil-to-fruit nutrient transmission have rarely been resolved for climacteric pear species. This study investigated how green manure species modulate fruit quality at harvest and during postharvest storage life and their underlying soil–fruit linkages. Three preharvest treatments were imposed, as follows: control (CK), sweet clover (CM), and alfalfa (MX). Fruits were harvested and stored at 4 °C, with samplings at 1, 5, 10, 15, and 20 d. A critical quality transition was identified at 15 d, characterized by the concurrent peaking of soluble sugars, organic acids, vitamin C, and anthocyanins alongside an optimal sugar–acid ratio. Beyond this inflection point, CM and MX diverged markedly: CM enhanced soluble sugar accumulation, anthocyanin retention, and ester volatile production—most notably hexyl acetate, which increased over 14.4-fold—thereby generating a pronounced fruity aroma bouquet. Conversely, MX sustained higher amino acid and vitamin C levels and conferred superior late-storage stability, evidenced by a three-fold lower coefficient of variation in the sugar–acid ratio relative to CK. Partial-least-squares structural equation modeling (PLS–SEM) revealed soil fertility as the principal exploratory associative factor of fruit quality, but the fidelity of soil-to-fruit transmission was species-dependent. MX exhibited the highest observed associative strength (R² = 0.971), whereas CM exhibited attenuated transmission fidelity (R² = 0.777), with network analysis further indicating that CM exhibited divergent associative patterns of key soil–fruit correlations. These findings suggest that green manure identity is linked to postharvest quality through divergent soil–fruit coupling pathways: alfalfa shows nutrient transmission efficiency and stabilizes nutritional quality, whereas sweet clover promotes sugar-aroma accumulation at the cost of reduced soil–fruit conversion fidelity. Species-specific green manure selection thus offers a viable strategy for targeted modulation of postharvest traits in Korla fragrant pear. Full article

Shanghai-native vegetable soybean (Glycine max [L.] Merril) landraces are valuable germplasms, but their systematic evaluation for agronomic and nutritional traits remains insufficient. This study aimed to assess their phenotypic and nutritional diversity to explore their potential for breeding and meeting dietary needs. Twenty-nine local landraces and one control cultivar (‘Qingsu 7’) were evaluated for key agronomic traits, yield components, nutritional traits, and isoflavone profiles, using hierarchical clustering, principal component analysis (PCA), and correlation analysis. Substantial phenotypic diversity was found, with the germplasm classified into four groups. First pod height and effective pods per plant were highly variable. Nutritional traits showed low variability for crude protein but high diversity for crude fat, soluble sugars (dominated by sucrose), vitamin C, and free amino acids. Total isoflavone content in dry seeds varied widely, with genistin, daidzin, and daidzein as the main forms. ‘Xiangshui Maodou’ had high free amino acids and vitamin C, ‘Heiyan Susudou’ showed superior soluble sugar content, and two landraces exceeded 1500 μg/g DW total isoflavones. The landraces possess rich phenotypic diversity and nutritional diversity. This germplasm represents a valuable resource for breeding programs to enhance crop quality and address global nutritional demands. Full article

Beyond nutrition, taste quality is a key quality trait driving the global popularity of Agaricus bisporus. This study systematically investigated non-volatile taste-related metabolite dynamics in caps and stipes during fruiting body development using non-targeted metabolomics. Among 1358 identified metabolites (974 in caps, 997 in stipes), 328 taste-related metabolites were screened. Applying screening criteria of VIP > 1, p < 0.01, and fold change ≥ 2 or ≤ 0.5, 492 and 446 differentially accumulated metabolites (DAMs) were identified in cap and stipe during fruiting body development, respectively. Cross-tissue comparison revealed 975 tissue-specific DAMs between cap and stipe across all developmental stages. Notably, 127 and 116 taste-related DAMs in cap and stipe, respectively, exhibited seven distinct accumulation profiles. Key umami-related compounds, aroma precursors, and antioxidants peaked in cap tissue at stage 3 (closed cup stage), suggesting a preliminary optimal harvest timing for market-quality mushrooms based on metabolic profiling of non-volatile taste-active compounds. Organic acids and nucleotides were more abundant in immature stages, while phosphorylated six-carbon sugars showed stipe-dominant accumulation at middle–late stages. Notably, all taste-related conclusions are inferred from non-volatile metabolite characterization rather than direct sensory measurements. KEGG pathway enrichment highlighted that taste-related metabolites primarily shaped taste via amino acid biosynthesis, cofactor metabolism, lysine biosynthesis, and nucleotide pathways. These insights provide a metabolic foundation for optimizing cultivation strategies and enhancing product quality in Agaricus bisporus. Full article

Southern corn leaf blight (SCLB), caused by Bipolaris maydis, poses a serious threat to maize production worldwide. In our previous study, Bacillus velezensis BV3 was isolated and demonstrated strong antagonistic activity against maize leaf spot pathogens and effective disease control in greenhouse experiments. In this study, we evaluated the plant growth-promoting effects of BV3 on two maize cultivars through root application in pot experiments, and investigated the underlying molecular mechanisms using transcriptomic and metabolomic analyses. Inoculation with BV3 significantly promoted maize growth. Moreover, BV3 treatment induced extensive transcriptional and metabolic reprogramming in maize. Transcriptomic analysis identified numerous differentially expressed genes (DEGs) mainly enriched in plant–pathogen interaction, plant hormone signal transduction, MAPK signaling pathway, and phenylpropanoid biosynthesis pathways. Metabolomic analysis revealed substantial changes in metabolite accumulation, particularly in lipids, amino acids, sugars, organic acids, and polyphenols, with enriched pathways including secondary metabolite biosynthesis, phenylpropanoid biosynthesis, and flavonoid biosynthesis. LC/MS and GC/MS analyses further revealed that BV3 produced diverse bioactive compounds. 2,4-DTBP and surfactin exhibited strong antifungal activities, particularly against B. maydis and Exserohilum turcicum. Overall, Bacillus sp. BV3 exhibits strong biocontrol efficacy against maize leaf spot pathogens and significant plant growth-promoting activity, highlighting its potential as an eco-friendly biocontrol agent for the management of southern corn leaf blight. Full article

Hydrothermal carbonization (HTC) is a promising thermochemical process for valorizing wet biomass and organic waste streams, generating hydrochar, gas, and a liquid phase commonly referred to as HTC process liquid or the aqueous phase. Depending on feedstock type and process severity, hydrochar typically accounts for approximately 40–70 wt.% of the initial dry feedstock, the liquid phase for about 30–60 wt.% in lignocellulosic and agricultural residues, and the gas phase for about 1–10 wt.%, while highly hydrated waste streams may generate even higher liquid-phase shares. Although hydrochar has traditionally been considered the main energy product, the liquid phase may retain approximately 20–65% of the initial feedstock carbon and around 15–25% of the initial energy content. However, its high chemical oxygen demand, elevated organic carbon content, variable biodegradability, toxicity, and inhibitory compounds often lead to its classification as a wastewater stream requiring treatment. The crucial novelty of this review is its system-oriented evaluation of HTC process liquid as an energy-bearing and system-integrating stream rather than merely as a wastewater by-product or as a substrate for isolated valorization routes. Therefore, this review evaluates the role of HTC process liquid in energy systems, focusing on its formation mechanisms, chemical composition, energy potential, valorization pathways, integration strategies, and environmental implications. The reviewed evidence shows that HTC process liquid contains a complex mixture of dissolved organic compounds, including volatile fatty acids, sugars, furans, phenols, ketones, aldehydes, amino acids, ammonia, and nitrogen-containing heterocycles. These compounds may support anaerobic digestion, dark fermentation, aqueous phase reforming, electrochemical conversion, nutrient recovery, and process-water recirculation. Among these routes, anaerobic digestion is currently the most mature, although its efficiency depends strongly on HTC severity, feedstock type, inhibitor formation, and microbial adaptation. Hydrogen-oriented and electrochemical pathways offer additional opportunities but still require further validation using real HTC liquids, standardized yield reporting, and long-term stability assessment. Overall, HTC process liquid should not be regarded solely as an environmental burden, but as a chemically complex and energy-rich stream that may improve the performance of integrated HTC-based bioenergy systems. Future research should focus on standardized liquid-phase energy metrics, long-term process integration, toxicity control, and experimentally validated techno-economic and life-cycle assessments. Full article

The intestine, particularly the gut microbiota, and the liver play key roles in digestion, nutrient transformation, and immune regulation in fish. However, limited information is available regarding how different ornamental fish species regulate these systems under identical aquaculture conditions. Therefore, this study systematically compared gut microbiota diversity, structural variation, and predicted ecological functions among eight ornamental fish species reared in the same environment, using 16S rRNA high-throughput sequencing combined with digestive enzyme indices and histological analysis of intestinal and liver tissues. The results showed that goldfish (Carassius auratus) and crucian carp exhibited efficient digestive and absorptive capacities, supported by a thickened muscularis and prominent mucosal layers (p < 0.001). High goblet cell density was observed in red swordtail (Xiphophorus hellerii) and Mickey Mouse platy (Xiphophorus hellerii × X. maculatus) (p < 0.001). Larger hepatocyte perimeter and area were observed in red swordtail (p = 0.022, p = 0.015), whereas platinum mini parrot cichlid and sapphire mini parrot cichlid showed significant hepatocyte vacuolization. Microbial analysis showed that the eight fish species had similar α diversity indices, while the gut microbial profiles of Mickey Mouse platy and golden crucian carp differed the most. At the genus level, beneficial taxa such as Lactococcus, Paracoccus, and Cetobacterium were significantly enriched in red swordtail, sailfin molly, and goldfish, respectively, whereas opportunistic pathogens, including Edwardsiella, Aeromonas, and Acinetobacter, were enriched in Mickey Mouse platy, sapphire mini parrot cichlid, and golden crucian carp, respectively (p < 0.05). Functional prediction based on KEGG pathways indicated that sailfin molly and Mickey Mouse platy exhibited the broadest functional enrichment, primarily involving amino acid metabolism, fatty acid metabolism, and antibiotic biosynthesis. Crucian carp and golden crucian carp showed higher activity in amino acid biosynthesis and glycolysis/gluconeogenesis pathways. The two parrot cichlid species were characterized by enrichment in biofilm formation pathways of pathogenic bacteria and amino sugar and nucleotide sugar metabolism pathways. Goldfish and red swordtail were mainly associated with quorum sensing and ABC transporter pathways. These results provide a theoretical foundation for optimizing aquaculture conditions for ornamental fish and improving fish health and production efficiency. Full article

This study examined the effects of soy sauce-based marinades containing fruit extracts (pineapple, apple) and sugar on the physicochemical, amino acid, flavor, and sensory characteristics of pork bulgogi. Five marinades (sugar only, pineapple, apple, pineapple+sugar, apple+sugar (App+Sug)) were compared. Pineapple exhibited high sweetness, acidity, and protease activity, consequently enhancing essential amino acids but causing undesirable mushy texture due to excessive proteolysis. Meanwhile, apple enriched umami-related amino acids (Glu, Gln) and provided balanced organic acid and sugar profiles without structural degradation. HPLC confirmed pineapple was rich in sucrose and citric acid, while apple contained more fructose and malic acid. Fruit-containing marinades increased esters, alcohols, and Maillard compounds, while reducing lipid oxidation aldehydes, thereby contributing to improved aroma and oxidative stability. Sensory evaluation revealed App+Sug marinade achieved the highest scores in flavor, tenderness, chewiness, and overall preference, thus indicating synergistic effects of fruit acids and sugars. Conversely, pineapple-based marinades, despite strong tenderizing potential, were less palatable. Overall, App+Sug marinade provided the best balance of flavor, tenderness, and consumer acceptability, while pineapple requires controlled application to prevent excessive softening. Full article

Phenolic acids are known allelopathic compounds that may serve as the primary cause of continuous cropping obstacles in Coix lacryma-jobi L. (Coix). However, the concentrations, types, and specific stress responses of Coix to these phenolic acids still require further investigation. In this study, the cultivar ‘Wanyi 2′ was used to examine the effects of different phenolic acids and their concentrations on the growth of Coix. Four concentrations (0 mg/L, 10 mg/L, 100 mg/L, and 1000 mg/L) and four phenolic acid types (p-hydroxybenzoic acid, salicylic acid, cinnamic acid, and ferulic acid) were used to assess their influences on plant growth, leaf physiological parameters, and metabolic pathways under greenhouse conditions. In this greenhouse pot experiment, the effects of the four phenolic acids showed a similar tendency: a low concentration (10 mg/L) tended to promote the growth and root development of Coix seedlings, whereas high concentrations (100 and 1000 mg/L) generally showed inhibitory effects. Among these phenolic acids, ferulic acid exhibited the strongest inhibitory effect at the highest concentration (1000 mg/L), while salicylic acid showed the most pronounced growth-promoting effect at low concentrations (10 mg/L). In addition, high levels of phenolic acids markedly increased antioxidant enzyme activities and oxidative stress-related substances in Coix leaves, while reducing soluble sugar (SS) and soluble protein (SP) contents. Our data suggest that under phenolic acid stress, Coix leaves exhibited changes in the metabolism of phenolic acids (e.g., 4-methoxysalicylic acid, gallic acid) and amino acids (e.g., glutathione, proline), which may be associated with the adaptive response to allelochemical-induced stress. Overall, this study provides insights that may support strategies to optimize plant growth regulators and mitigate continuous cropping barriers in Coix. Full article

The aim of this study was to investigate the dynamic changes in physicochemical properties, microbial community, metabolite profiles, and volatile compounds in watermelon soybean paste (WSP) during natural fermentation. Results showed that total acids, amino nitrogen, reducing sugar content, and umami-taste amino acids were significantly increased in WSP samples during the fermentation process. Various bacterial communities, including Enterobacter, Bacillus, Staphylococcus, Enterococcus, Weissella, and Lactobacillus, were detected as dominant genera. A total of 804 metabolites, mainly including lipids (18.78%) and amino acids and their derivatives (13.56%), were detected across the different fermentation stages. The correlation analysis between volatile compounds and bacterial community at the genus level revealed that 2-methylisoborneol, 1-octen-3-ol, benzene acetaldehyde, tetramethylpyrazine, and phenylethyl alcohol strongly correlated with Enterococcus, Bacillus, Weissella, and Pseudomonas. This study revealed the dynamics of the bacterial community and volatile compounds in the fermentation process and demonstrated their inter-relationship during WSP fermentation. Full article

Drought impairs osmotic adjustment and photosynthetic performance in legumes; however, the role of micronutrients in modulating these responses across genotypes remains unclear. This study investigated the effects of selenium on the osmolytes and photosynthetic efficiency in two vegetable-soybean (Glycine max L. Merrill) cultivars differing in drought responses: UVE14 (drought-tolerant) and UVE17 (drought-susceptible). Plants were grown under well-watered (100% soil water-holding capacity, WHC) and water-limited (30% soil WHC) conditions, with or without soil-applied selenium. Free amino acids, soluble sugars, chlorophyll pigments, vegetation indices, and chlorophyll fluorescence parameters were assessed at the flowering and pod-filling stages. Under drought conditions, selenium enhanced tolerance primarily by modulating free amino acid metabolism at flowering, increasing aspartate, asparagine, glutamine, and glutamate levels, alongside improvements in chlorophyll content, canopy greenness, and PSII photochemical efficiency. These responses indicate a coordinated adjustment between nitrogen metabolism and photosynthetic function. Both cultivars benefited from selenium application, although the responses were more pronounced in the susceptible cultivar (UVE17). Selenium-induced changes in soluble sugar content were greater under well-watered conditions in both cultivars. The limited accumulation of stress-associated osmolytes, such as proline, following selenium soil drench suggests reduced cellular disruption and mitigation of drought-induced stress. These findings highlight selenium as a context-dependent modulator of drought resilience and emphasize cultivar- and developmental stage-specific effects. Full article

Magnesium fertilizer application generally improves both the internal and visual quality of tomato fruits grown in magnesium-deficient soils. However, it remains unclear whether similar effects occur in magnesium-sufficient soils under high nitrogen fertilization. A field experiment was conducted in Wuhan, China, using soil with suitable available Mg content (385.97 mg kg⁻¹) and four nitrogen (N) application rates (0, 100, 200, and 300 kg N ha⁻¹) combined with foliar Mg spraying. This study evaluated tomato yield, nitrogen use efficiency, and fruit quality. Nitrogen application combined with foliar Mg significantly increased yield and biomass. The highest fruit yield was achieved with 200 kg N ha⁻¹ plus foliar Mg, showing a 104.9% increase compared with the control, while the greatest biomass was observed under 300 kg N ha⁻¹ with Mg spraying. Foliar Mg application also enhanced leaf nitrogen accumulation, shoot magnesium accumulation, and nitrogen use efficiency. Furthermore, fruit titratable acidity, vitamin C, total phenols, redness, chroma, and yellowness were significantly improved. Fruit redness was positively associated with sugars, amino acids, vitamin C, and phenolic compounds. Overall, foliar Mg application under 200 kg N ha⁻¹ improved tomato yield, nitrogen use efficiency, and fruit quality. Full article

Chiang Mai, Thailand, experiences seasonal fine particulate matter (PM_2.5) pollution associated with metabolic diseases, but the underlying mechanisms remain unclear. This prospective observational study compared plasma metabolomes of 25 healthy adults in Samoeng District, a highly affected area, between low and high PM_2.5 exposure seasons using proton nuclear magnetic resonance (¹H-NMR) spectroscopy. Twenty-six metabolites differentiating haze and non-haze seasons were identified using PLS-DA (VIP > 1.5). During the haze season, 11 were elevated, whereas 15 were decreased. Among the elevated metabolites, the top five—maleylacetoacetic acid, deoxyribose 5-phosphate, betaine, 3-hydroxyanthranilic acid, and 1-methyladenosine—were associated with inflammation, increased reactive oxygen species, nitric oxide inhibition, and altered amino acid metabolism. The top five decreased metabolites—deoxyguanosine, D-arabitol, glycerophosphocholine, ophthalmic acid, and oxaloacetic acid—were involved in several metabolic pathways, particularly those involved in energy metabolism. A total of 56 metabolic pathways were altered by high PM_2.5 exposure, including pathways related to amino acids, lipids, sugars, nucleotides, vitamins, and energy metabolism. High PM_2.5 exposure disrupts metabolites and pathways, inducing inflammation, oxidative stress, impaired lipid/energy metabolism, insulin resistance, and high blood pressure. These alterations may increase the risk of metabolic and cardiovascular diseases, with dysregulated metabolites serving as potential biomarkers. These findings highlight the molecular impact of air pollution in affected populations and may support preventive strategies and public health policy development in affected regions. Further studies are needed to clarify these findings. Full article

Aflatoxin contamination is the main risk factor in grain and oil crops, which brings serious threats to food and feed safety. Exploring a green and safe way to reduce aflatoxin is meaningful. In this study, six strains with aflatoxin removal ability are screened from traditional Chinese fermented vegetables. It was found that Lactiplantibacillus plantarum YS-718, as fermentation probiotics, showed the best performance on the aflatoxin B₁ mitigation with the removal rate of 78.15% in liquid fermentation. To investigate the mechanism of removal, the aflatoxin B₁ reduction tests by different components of Lactiplantibacillus plantarum YS-718 demonstrated that the bacterial suspension of Lactiplantibacillus plantarum YS-718 fermentation exhibited stronger adsorption ability compared to the removal ability of the supernatant of YS-718 fermentation. In addition, the Lactiplantibacillus plantarum YS-718 and aflatoxin B₁ complex retained 43.74% of adsorption ability after four times repeated elution with PBS and 37.22% of adsorption after digestion with simulated gastric fluid for four hours. Moreover, Lactiplantibacillus plantarum YS-718 could be used to reduce aflatoxin B₁ in peanut meal. By evaluating the contents of protein, amino acids, total sugars, and fatty acids after the fermentation treatment, it was found that Lactiplantibacillus plantarum YS-718 fermentation could increase the contents of protein, fatty acids, and amino acids in peanut meal. This study might provide useful information for constructing a green, safe, and efficient method for removing aflatoxin from peanut meal. Full article

Aphis craccivora is a major piercing–sucking insect pest in faba bean (Vicia faba L.) production and severely restricts yield and quality. To identify aphid-resistant genetic resources and clarify the key physiological and biochemical mechanisms underlying resistance and susceptibility, 937 faba bean germplasm accessions were evaluated using a stepwise strategy comprising natural field screening, precise net-house re-screening, laboratory validation based on aphid life-table parameters, and physiological and biochemical characterization of representative resistant and susceptible accessions. After final laboratory validation, three resistant and three susceptible accessions were selected and subjected to aphid feeding for 0 h (CK), 36 h, and 72 h. Eleven physiological and biochemical traits were dynamically analyzed, including the activities of superoxide dismutase (SOD), peroxidase (POD), catalase (CAT), and phenylalanine ammonia-lyase (PAL), as well as the contents of soluble protein, soluble sugar, free amino acids, tannins, total phenolics, flavonoids, and lignin. Three stable aphid-resistant accessions were ultimately identified. Laboratory life-table analysis showed that the net reproductive rate of aphids on resistant accessions was significantly lower than that on susceptible accessions, with R₀ decreasing from 53.63 to 25.08, representing a reduction of 53.2%. The intrinsic rate of increase decreased by 26.7%, whereas the mean generation time increased by 10.7%, confirming the reliability of the screening results. Physiological and biochemical analyses showed that aphid feeding induced significant and time-dependent increases in SOD, POD, CAT, and PAL activities and in tannin, total phenolic, flavonoid, and lignin contents in resistant accessions, whereas these defense responses were weak in susceptible accessions. In contrast, susceptible accessions showed abnormal accumulation of soluble sugars and free amino acids, whereas resistant accessions maintained these nutrients at low levels. Lignin exhibited both constitutive and inducible defense characteristics in resistant accessions and emerged as a prominent candidate indicator for aphid resistance in faba bean. This study establishes an effective technical pipeline for screening aphid-resistant faba bean germplasm and reveals a coordinated defense network involving antioxidant enzymes, phenylpropanoid metabolism, secondary metabolites, and physical barriers. These findings provide elite parental germplasm and theoretical support for aphid-resistance breeding in faba bean. Full article