Search Results (144)

Background/Objectives: As bacteriophage-based strategies to control bacterial pathogens continue to gain momentum, phage therapy is increasingly being explored across various fields. In the poultry industry, efforts to minimize the public health impact of Salmonella have spurred growing interest in phage applications, particularly as prophylactic and disinfecting agents. Although the disinfecting potential of bacteriophages has been recognized, in-depth studies examining their efficacy under varying environmental conditions remain limited. This study focused on evaluating the effectiveness of bacteriophages as disinfecting agents against biofilm-forming Salmonella Infantis under different environments. Methods: A comprehensive screening of biofilm-producing strains was conducted using Congo Red Agar and 96-well plate assays. Two strains with distinct biofilm-forming capacities were selected for further analysis under different environmental conditions: aerobic and microaerobic atmospheres at both 25 °C and 37 °C. The resulting biofilms were then treated with four phage preparations: three individual phages and one phage cocktail. Biofilm reduction was assessed by measuring optical density and CFU/well. Additionally, scanning electron microscopy was used to visualize both untreated and phage-treated biofilms. Results: The results demonstrated that all S. Infantis strains were capable of forming biofilms (21/21). All three phage candidates exhibited biofilm-disrupting activity and were able to lyse biofilm-embedded Salmonella cells. Notably, the lytic efficacy of the phages varied depending on environmental conditions, highlighting the importance of thorough phage characterization prior to application. Conclusions: These findings underscore that the effectiveness of bacteriophages as surface disinfectants can be significantly compromised if inappropriate phages are used, especially in the presence of biofilms. Full article

The Qinghai-Xizang Plateau is among the most ecologically vulnerable and responsive areas worldwide. Studying the characteristics of soil microbial communities along altitudinal gradients on plateaus and revealing the response mechanisms and vertical distribution patterns of microbial communities in alpine ecosystems is of significant academic value for assessing the ecological stability of the Qinghai-Xizang Plateau. This research examines the Lhasa River Basin by employing Illumina NovaSeq high-throughput sequencing to investigate how soil bacterial and fungal communities shift across elevation gradients in the Duilong Qu subbasin. This study also explored the key environmental drivers behind these microbial distribution patterns. The results indicate the following: (1) Key bacterial groups in the Duilong Qu Basin soil include Proteobacteria, Acidobacteria, and Actinobacteria, with Ascomycota, Mortierellomycota, and Basidiomycota as the prevalent fungal phyla. (2) Soil bacterial richness fluctuates with increasing elevation, and diversity exhibits a V-shaped distribution; fungal richness increases monotonically with elevation, whereas diversity shows no altitudinal dependence. (3) Principal coordinate analysis (PCoA) revealed that bacterial community structures exhibit separation trends across different elevations, with high intragroup consistency; fungal community structures at mid-elevations (4000–5000 m) show clustering similarity, whereas those at 3650–5000 m and 5500 m remain highly distinct from those at other elevations. (4) RDA reveals that factors such as accessible phosphorus, potassium, and organic content have a major effect on how bacterial communities are arranged. On the other hand, soil conductivity, along with available and total phosphorus levels, as well as pH, plays a key role in shaping fungal communities. (5) Functional prediction analysis suggests that soil bacteria shift from aerobic and biofilm-forming to facultatively anaerobic, stress-tolerant, and pathogenic traits with increasing elevation. Fungi are predominantly undefined saprotrophs, transitioning from ectomycorrhizal and pathogenic functions to saprotrophic functions at relatively high elevations. Full article

Delftia acidovorans (D. acidovorans) is a non-fermentative, aerobic, Gram-negative bacillus typically found in environmental sources such as soil and water. Although considered an opportunistic pathogen, it has been implicated in both immunocompromised and immunocompetent individuals. This study presents a case of persistent cathether-related bacteraemia in a 61-year-old haemodialysis patient and offers a systematic literature review of similar cases. The patient, affected by end-stage kidney disease and dependent on a central venous catheter (CVC), presented with septic shock. Blood cultures confirmed D. acidovorans, resistant to aminoglycosides but sensitive to cephalosporins, piperacillin/tazobactam, and fluoroquinolones. Despite appropriate antibiotic therapy, bacteraemia persisted, prompting the use of taurolidine lock therapy when catheter removal was initially unfeasible. Blood cultures cleared after nine days, and the catheter was later replaced. A systematic review following PRISMA guidelines identified 21 additional cases of D. acidovorans bacteraemia. Most (76.2%) occurred in immunocompromised patients, particularly those with malignancies, chronic haemodialysis, or indwelling devices. Infections in immunocompetent individuals were typically associated with intravenous drug use or environmental exposure. Mortality was approximately 19%. Aminoglycoside resistance was consistent across most cases, while susceptibility to piperacillin/tazobactam, cephalosporins, and carbapenems was generally preserved. Given its resistance profile and ability to form biofilms, D. acidovorans poses a management challenge, particularly in catheter-associated infections. Rapid identification and targeted antimicrobial therapy are crucial. Adjunctive measures such as taurolidine lock therapy can be beneficial when device removal is not immediately possible. Full article

Microbiologically influenced corrosion (MIC) is one of the key causes of material failure in marine engineering, and sulfate-reducing bacteria (SRB) and iron-oxidizing bacteria (IOB) are typical representatives of anaerobic and aerobic microorganisms, respectively. These microorganisms are widely present in marine environments and can form synergistic communities on the surface of metal materials, posing a corrosion threat to them. At the same time, the presence of mixed bacteria may have an effect on cathodic protection, so this study investigates the growth metabolism of mixed SRB and IOB under different cathodic protection potentials in an impressed current cathodic protection (ICCP) system in a marine environment containing SRB and IOB. It also examines the attachment of these microorganisms to the anode and cathode, and the impact on cathodic protection efficiency. The results indicate that in a marine environment containing IOB and SRB, the cathodic protection efficiency of the ICCP system increases with the negative shift of the protection potential. A more positive cathodic protection potential promotes the adhesion of mixed bacteria on the electrode surface and the formation of a biofilm, which reduces cathodic protection efficiency. In contrast, at a cathodic protection potential of −1.05 V (SCE), bacterial growth is inhibited, and a dense crystalline corrosion film primarily composed of Fe₂O₃ and Fe(OH)₃ forms on the cathode surface. This film effectively protects the cathodic metal, significantly mitigating MIC. Full article

Choline-based ionic liquids (ILs) have gained attention as antimicrobial and antibiofilm agents due to their biocompatibility and tuneable antimicrobial properties. However, a significant drawback of amphiphilic choline-based ILs is their decreasing biodegradability as the alkyl chain length increases. To address this issue and enhance the ecotoxicological profile of these compounds, a labile ester functionality was incorporated into the alkyl side chain. This strategic modification aims to improve biodegradation rates while maintaining the desirable antimicrobial properties of the ILs. A series of ester-functionalized choline-based ionic liquids (CnECholBr) with alkyl chains containing from 10 to 14 carbon atoms were synthesized, and their self-aggregation behaviour in aqueous solutions was studied. Their antimicrobial properties were then tested against clinically significant bacteria and yeasts, as well as their effectiveness in eliminating MRSA and C. albicans biofilms. Furthermore, the ecotoxicological properties of these compounds were investigated by assessing their aerobic biodegradability and aquatic toxicity using luminescent bacteria. The results indicated that CnECholBr exhibit higher surface activity and biodegradation rates than non-functionalized choline-based ILs. Conversely, their antimicrobial and antibiofilm activity was found to be lower to that of non-functionalized choline-based ILs. Among the compounds evaluated, the C₁₂ECholBr was identified as the most effective antimicrobial and antibiofilm agent. Full article

The membrane-aerated biofilm reactor (MABR) is an emerging technology for the biological treatment of wastewaters. It can achieve simultaneous nitrification and denitrification due to anoxic liquid conditions. The counter diffusion of oxygen and nutrients in the biofilm allows for aerobic and anoxic layers, providing conditions where the formation, accumulation and consumption of nitrous oxide can all occur. The microbial processes involved in the production and consumption of N₂O are complex, and, due to the innovative nature of the MABR, understanding the influence of operational factors helps to minimise N₂O emission. Using a lab-scale 20L MABR system, an investigation was carried out to determine the influence of operational factors on the emission of nitrous oxide from the reactor. A direct link between the nitrous oxide emissions and bulk liquid conditions could not be established with only limited statistical correlation between them. It was found that under both steady loading rates and transient conditions, the emission of nitrous oxide was most influenced by the air flow rate through the membranes. The majority of N₂O emissions occurred via the membrane off-gas and not through the liquid. N₂O flux through the membrane was influenced not only by the accumulation of N₂O in the biofilm side but also by the gas residence time on the lumen side. Therefore, minimising the air flow rate is an effective strategy to mitigate nitrous oxide emissions from the MABR. Full article

Rotating biological contactors (RBCs) are widely utilized in aerobic wastewater treatment due to their high stability, efficiency, and ease of maintenance. The choice of disc carrier material for biofilm formation is a critical factor influencing treatment performance. In the context of rural domestic wastewater treatment, the biofilm carriers must balance cost-effectiveness and high efficiency. This study focuses on the aerobic unit of a combined anoxic denitrification–deodorization filter–aerobic RBC system, specifically, the waterwheel-driven aerobic RBC, and evaluates three types of biofilm carrier media: felt, carbon felt, and nonwoven fabric. The study compares their pollutant removal performance and biofilm enrichment characteristics to identify the optimal material. The results indicate that RBCs using nonwoven fabric as the biofilm carrier exhibit superior nitrification efficiency and biocompatibility compared to the other materials, achieving average removal rates of 84.3% for COD_Cr and 80.5% for ammonia nitrogen. While the addition of nonwoven fabric slightly reduced the driving efficiency of the waterwheel-driven aerobic RBC, it significantly enhanced oxygen transfer efficiency, which explained the enhanced organic degradation and ammonia nitrification. During the biofilm stable phase, the two-stage waterwheel-driven RBC with a nonwoven fabric carrier achieved average COD_Cr and ammonia nitrogen removal rates of 86.76 ± 0.85% and 92.15 ± 1.49%, respectively. Nonwoven fabric demonstrates significant potential as a biofilm carrier for aerobic rotating biological contactors. Full article

The increasing use of biodegradable plastic mulch like polybutylene adipate terephthalate (PBAT) has raised concerns about its long-term environmental impact. In this study, we investigated the effects of multiyear PBAT mulch application on bacterial and fungal communities, assembly mechanisms, and key ecological functions. The microbial community diversity and composition were significantly altered after multiyear biodegradable plastic mulching. We observed that PBAT treatment enriched specific bacterial genera, such as Pantoea, potentially involved in plastic degradation, and fungal genera like Cephaliophora and Stephanosporaceae, which may play a role in organic matter decomposition. A null model analysis revealed that bacterial community assembly was largely shaped by deterministic processes, with stronger environmental selection pressures in PBAT-treated soils, while fungal communities were more influenced by stochastic processes. In addition, multiyear PBAT mulch application also impacted the functionality of the soil microbial communities. PBAT exposure enhanced biofilm formation in aerobic bacteria, promoting aerobic degradation processes while also reducing the abundance of stress-tolerant bacteria. Additionally, PBAT altered key microbial functions related to carbon, nitrogen, and sulfur cycling. Notably, the fungal communities exhibited functional shifts, with an increase in saprotrophic fungi being beneficial for nutrient cycling, alongside a potential rise in plant pathogenic fungi. These findings underscore the multiyear ecological impacts of biodegradable plastics, suggesting microbial adaptation to plastic degradation and changes in key ecological functions, with implications for agricultural sustainability and bioremediation strategies. Full article

The low solubility of CO₂ in water leads to massive CO₂ emission and extremely low CO₂ utilization in succinic acid (SA) biosynthesis. To enhance microbial CO₂ utilization, micro-nano bubbles (MNBs) were induced in SA biosynthesis by E. coli Suc260 in this study. The results showed that MNB aeration decreased CO₂ emissions and increased CO₂ solubility in the medium significantly. The CO₂ utilization of MNB aeration was 129.69% higher than that of bubble aeration in atmospheric fermentation. However, MNBs showed a significant inhibitory effect on bacterial growth in the pressurized environment, although a two-stage aerobic–anaerobic fermentation strategy weakened the inhibition. The biofilm-enhanced strain E. coli Suc260-CsgA showed a strong tolerance to MNBs. In pressurized fermentation with MNB aeration, the actual CO₂ utilization of E. coli Suc260-CsgA was 30.63% at 0.18 MPa, which was a 6.49-times improvement. The CO₂ requirement for SA synthesis decreased by 83.4%, and the fugitive emission of CO₂ was successfully controlled. The activities of key enzymes within the SA synthesis pathway were also maintained or enhanced in the fermentation process with MNB aeration. These results indicated that the biofilm-enhanced strain and CO₂-MNBs could improve carbon fixation efficiency in microbial carbon sequestration. Full article

Traditional wastewater treatment processes still encounter challenges such as the limited treatment efficiency and excessive greenhouse gas emissions, which restrict their application in environmentally sustainable practices. This study developed an A/O biofilm system and assessed the impact of inoculating the system with the heterotrophic nitrification–aerobic denitrification (HN–AD) strain Alcaligenes faecalis WT14 on pollutant removal efficiency and greenhouse gas emissions. A continuous monitoring experiment was conducted over 140 days, comparing the system inoculated with WT14 (the T_WT14 system) and the non-inoculated system (the CK system). The results demonstrated that the T_WT14 system outperformed the CK system in pollutant removal, with higher NH₄⁺-N, TN, and COD removal efficiencies of 11.22%, 21.96%, and 12.51%, respectively, and the quality of discharge water from T_WT14 maintaining compliance with national discharge standards. This improvement underscores the positive impact of inoculation with the WT14 strain on enhancing the pollutant removal performance of the A/O biofilm system. Regarding greenhouse gas emissions, the T_WT14 system exhibited a significantly higher N₂O emission flux in the aeration tank compared with the CK system, while CO₂ and CH₄ emissions were predominantly concentrated in the anaerobic tank. Global warming potential (GWP) analysis showed no significant difference in the total average GWP between the two systems. However, the T_WT14 system demonstrated a lower GWP per unit of TN removed, highlighting its superior ecological benefits. Environmental factor analysis revealed that the temperature, pH, humidity, and salinity had significant impacts on both pollutant removal efficiency and greenhouse gas emissions. Additionally, microbial community analysis indicated that inoculation with the WT14 strain enhanced microbial diversity and richness within the A/O biofilm system, with Alcaligenes and norank_f_JD30-KF-CM45 playing key roles in nitrogen removal. This study provides valuable insights for optimizing A/O biofilm system design and offers scientific guidance for the sustainable upgrading of wastewater treatment technologies. Full article

Facultatively anaerobic Staphylococcus spp. and anaerobic Cutibacterium spp. are among the most prominent bacteria on human skin. Although skin microbes generally grow as multispecies biofilms, few studies have investigated the interaction between staphylococci and Cutibacterium spp. in dual-species biofilms. Here, we measured the mono- and dual-species biofilm formation of four staphylococcal species (S. epidermidis, S. hominis, S. capitis, and S. aureus) and two Cutibacterium spp. (C. acnes and C. avidum) cultured in vitro under both aerobic and anaerobic conditions. The biofilms were quantitated by rinsing them to remove planktonic cells, detaching the biofilm bacteria via sonication, and enumerating the cells by dilution plating. When cultured alone, staphylococci formed biofilms under both aerobic and anaerobic conditions, whereas Cutibacterium spp. formed biofilms only under anaerobic conditions. In co-culture, staphylococcal biofilm formation was unaffected by the presence of Cutibacterium spp., regardless of oxygen availability. However, Cutibacterium spp. biofilm formation was significantly enhanced in the presence of staphylococci, enabling robust growth under both anaerobic and aerobic conditions. Fluorescence confocal microscopy of the aerobic dual-species biofilms suggested that staphylococci create anaerobic niches at the base of the biofilm where C. acnes can grow. These findings demonstrate that staphylococci facilitate the colonization of Cutibacterium spp. in oxygen-rich environments, potentially explaining their presence in high numbers on the oxygen-exposed stratum corneum. Full article

Xylella fastidiosa is an aerobic, Gram-negative bacterium that is responsible for many plant diseases. The bacterium is the causal agent of Pierce’s disease in grapes and is also responsible for citrus variegated chlorosis, peach phony disease, olive quick decline syndrome and leaf scorches of various species. The production of biofilm is intrinsically linked with persistence and transmission in X. fastidiosa. Biofilm formation is regulated by members of the Diffusible Signal Factor (DSF) quorum sensing signalling family which are comprised of a series of long chain cis-unsaturated fatty acids. This article describes the evaluation of a library of N-acyl sulfonamide bioisosteric analogues of BDSF, XfDSF1 and XfDSF2 for their ability to control biofilm production in X. fastidiosa. The compounds were screened against both the wild-type strain Temecula and an rpfF* mutant which can perceive but not produce XfDSF. Planktonic cell abundance was measured via OD600 while standard crystal violet assays were used to determine biofilm biomass. Several compounds were found to be effective biofilm inhibitors depending on the nature of the sulfonamide substituent. The findings reported here may provide future opportunities for biocontrol of this important plant pathogen. Full article

A total of 104 samples of chicken meat acquired on the day of slaughter from two slaughterhouses in northwestern Spain were analyzed. These comprised 26 carcasses and 26 cuts from each of the two establishments. An average load of 5.39 ± 0.61 log₁₀ cfu/g (total aerobic counts) and 4.90 ± 0.40 log₁₀ cfu/g (psychrotrophic microorganisms) were obtained, with differences (p < 0.05) between types of samples and between slaughterhouses. Culturing methods involving isolation based on the UNE-EN-ISO 11290-1:2018 norm and identification of isolates by polymerase chain reaction (PCR) to detect the lmo1030 gene allowed the detection of Listeria monocytogenes in 75 samples (72.1% of the total; 50.0% of the carcasses and 94.2% of the cuts). The 75 isolates, one for each positive sample, were tested for resistance against a panel of 15 antibiotics of clinical interest by the disc diffusion method. All isolates belonged to the serogroup IIa (multiplex PCR assay) and showed resistance to between four and ten antibiotics, with an average value of 5.7 ± 2.0 resistances per isolate, this rising to 7.0 ± 2.1 when strains with resistance and reduced susceptibility were taken together. A high prevalence of resistance was observed for antibiotics belonging to the cephalosporin and quinolone families. However, the level of resistance was low for antibiotics commonly used to treat listeriosis (e.g., ampicillin or gentamicin). Nine different resistance patterns were noted. One isolate with each resistance pattern was tested for its ability to form biofilms on polystyrene during 72 h at 12 °C. The total biovolume of the biofilms registered through confocal laser scanning microscopy (CLSM) in the observation field of 16,078.24 μm² ranged between 13,967.7 ± 9065.0 μm³ and 33,478.0 ± 23,874.1 μm³, and the biovolume of inactivated bacteria between 0.5 ± 0.4 μm³ and 179.1 ± 327.6 μm³. A direct relationship between the level of resistance to antibiotics and the ability of L. monocytogenes strains to form biofilms is suggested. Full article

Campylobacter spp. are prevalent foodborne bacterial enteric pathogens. Their inclusion in biofilms on abiotic surfaces is considered a strategy that facilitates their extraintestinal survival. Organic acid (OA) treatments could be used in a green approach to decontaminate various surfaces. This work aimed to evaluate the inhibitory and eradicative effects of L(+)-lactic acid (LA), a naturally occurring OA, on a dual-species biofilm formed on two food processing model surfaces (polystyrene and stainless steel) by three selected foodborne Campylobacter spp. isolates (two C. jejuni and one C. coli). The influence of aerobiosis conditions (microaerophilic, aerobic and CO₂ enriched) on the resistance of the established biofilms to the acid was also tested. In parallel, the predominant metabolites contained in the planktonic media of biofilm monocultures and mixed-culture biofilm were comparatively analyzed by an untargeted metabolomics approach. Results revealed that LA inhibited mixed-culture biofilm formation by more than 2 logs (>99%) on both surfaces when this was applied at its highest tested concentration (4096 μg/mL; 0.34% v/v). However, all the preformed mixed-culture biofilms (ca. 10⁶⁻⁷ CFU/cm²) could not be eradicated even when the acid was used at concentrations exceeding 5% v/v, denoting their extremely high recalcitrance which was still influenced by the abiotic substratum, and the biofilm-forming aerobiosis conditions. The metabolic analysis revealed a strain-specific metabolite production which might also be related to the strain-specific biofilm-forming and resistance behaviors and resulted in the distinct clustering of the different samples. Overall, the current findings provide important information on the effectiveness of LA against biofilm campylobacteria and may assist in mitigating their risk in the food chain. Full article

Aim: To compare shock wave-enhanced emission photoacoustic streaming (SWEEPS) with sonic- and ultrasonically activated irrigation systems in removing Enterococcus faecalis biofilm from the root canal system. Methodology: Fifty human single-canalled mandibular premolars were included in the study. After access cavity preparation, the root canals were prepared to a standardized size and taper. Then, the entire root surface was covered with two layers of resin, and the root apices were sealed before sterilization. All root canals were inoculated with E. faecalis biofilm, and the samples were incubated aerobically for 2 weeks at 37 °C. Biofilm formation was confirmed by scanning electron microscopy. All samples were randomly divided into five groups (n = 10 each) based on their irrigation activation method as A (no treatment or negative control), B (no irrigation or positive control), C (sonically activated irrigation (SAI)), D (ultrasonically activated irrigation (UAI)), and E (needle irrigation activated by an Er: YAG laser device using a SWEEPS quartz tip (SWEEPS)). Then, dentine chips were retrieved, vortexed, and diluted for colony-forming unit counts. Data were analysed using analysis of variance and post-hoc Tukey tests (α = 5%). Results: All methods could significantly reduce E. faecalis biofilm compared with control so that the UAI, SWEEPS, and SAI groups indicated a 23.54%, 14.89%, and 7.81% biofilm reduction, respectively. UAI demonstrated a significantly more effective reduction of E. faecalis biofilm than SAI (p = 0.004). Conclusions: All irrigation activation methods significantly reduced E. faecalis biofilm, with ultrasonic use being the most effective. Full article